gi|00000000|ref|CP008923.1|  Corynebacterium pseudotuberculosis strain CS_10, complete genome. 2338144, gc%: 52.19%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(603991..605511)         PHAGE_Bacill_G_NC_023719: gp120; CPTB_00569; phage(gi593777579)                      7.53e-34            MTQQRVSTGGDNPDKVALVGLTFDDVLLLPDASDVIPSEVSTSTQLTRNISLNIPIISAAMDTVTESRMAIAMAREGGMGVLHRNLSIEEQAQHVETVKRSESGMVTDPVTCSPDMSIAEVDALCARFRISGLPVVDDNGTLLGICTNRDMRFEQDFSIKVSEIMTRMPLVVAEEGVTKQQALNLLSANKVEKLPIVDKQGKLVGLITVKDFVKTEQYPHASKDSTGRLLVGAGIGVGEESWTRAGALVDAGVDVLVVDSAHAHSSGVLDMVSRVKKEWGDRVDVIGGNLATRSAAKAMIEAGADAIKVGIGPGSICTTRVVAGVGAPQITAIMEASVPAHAAGVPIIADGGMQFSGDLAKALAAGASSVMLGSMLAGTAEAPGEIVVVGGKQYKRYRGMGSMGAMQGRGLSGEKRSYSKDRYFQADVKSEDKLVPEGIEGRVPFRGSIEAITHQLVGGLRASMGYTGSATINDLWNARFVQITSAGLRESHPHHIQQTVEAPNYH
605699..605923                     hypothetical protein; CPTB_00570                                                     N/A                 MPRDPFADDPNDPASFLDEDEPLPPLSEAEKRHIEEDLRLVQRFKKVLQPRVASTEFSSSAKTATRNTITTGTS
605920..606063                     hypothetical protein; CPTB_00571                                                     N/A                 MMENIRATLNGELSPVHEPSLNPNPQAYVPWDYCLGYLDGLEAPRFF
complement(606077..606958)         hypothetical protein; CPTB_00572                                                     N/A                 MTERRWARDGVEAAQSVEQLRADDQFLTHLSQGVDPTDGQDPLARLFLDARAEIQTNVPQAPTLAMLGLGSAEEFPTGELAPVTNESVDSSQLIDAPAAKVIELPRRRWNNAFAHALVGAAAATLIIAGGGTAIYNAGEGSALYALNQKFFGQTTNTEAVVALASKLDQANDLNAKGDKEGARQLLEQARELVNMLNARDRAQAEERIKEAERGSNVAPVPPPAEPEASSETVVTTMTTTVTETVTVEPTPARSTSTAPSTDRSATSSTSPVASTPSLTPAFELPQPEHSQAH
complement(606961..607551)         PHAGE_Bacill_Glittering_NC_022766: RNA polymerase sigma factor; CPTB_00573; phage(gi568191091)     6.21e-05            MRMMEEKGLAVAETETELSSLVPRAAGGDSRSLQRVISIIYPKVLSYARIRLSGGRHPTPEDVAQEICLAVATSISKFVDQGKPFMAFVYGIASNKVADAHRAYSRDVANPTEDVPETEVELETPESFALVAAGSNRVKELLDLLGDKPREIITLRVFVGLSAEETAEIVGSTPGAVRVAQHRALATLRKALEQEN
complement(608229..609851)         PHAGE_Cellul_phi14:2_NC_021806: chaperonin GroEL; CPTB_00574; phage(gi526178751)     3.11e-96            MAKLIAFNQEAREGILKGVDTLANAVKVTLGPRGRNVVLEKAFGSPTVTNDGVTIAREIDVEDRFENLGVQLVKSVAVKTNDIAGDGTTTATLLAQAVITEGLRNVAAGANPVELNRGILAAADKAVEKLGERAAEVASAADIANVATVSSRDAEIGDMVAAAMEKVGKDGVVTVEESQSIESYLDVTEGVSFDKGYLSPYFITDTDSQRAELDDPYILLVRNKISSLPDFLPLLEKTVEANKPVLIIAEDVEGEPLQTLVVNSIRKTLRAVAVKSPYFGERRKAFMDDLAVVTNATVVDPEVGINLNEAGVEVFGTARRVTVTKDETIIVDGAGTSEAVENRRQQIRREIENTDSSWDREKAEERLAKLSGGVAVIKVGAATETEVSERKLRVEDAINAARAAAQEGVIAGGGSALVQIAKELRVYAEEFEGDAKVGVNALANALSKPAYWIADNAGLDGAVVVSKIADLPNGEGFNAATLEYGNLIEQGIIDPVKVTHSAVVNATSVARMVLTTEASVVEKPVEAKPQAGGHHHHHHH
complement(609863..610159)         PHAGE_Bacill_0305phi8_36_NC_009760: GroES; CPTB_00575; phage(gi156564025)            3.07e-17            MANVNIKPLEDRVLVQISEAETTTASGLVIPDSAKEKPQEGVVVAAGPGRFDGDDRVPMDIKEGDTVVFSKYGGTELKYNGEEYLLLNARDVLAIIEK
complement(610321..611376)         PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; CPTB_00576; phage(gi16130960)     5.54e-75            MIVLGIESSCDETGVGIIELSPDGSMRILADAVASSMEEHARFGGVVPEIASRAHLEAMVPVMRQALDAAGVDKPDAVAATVGPGLAGALLVGASAAKAYAAAWDVPFYGVNHLGGHVAVANLEGEELPHSIALLVSGGHSQLLEVQAVGKPMKELGSTLDDAAGEAYDKVARLLGLGYPGGPVIDKLAARGNRKAIRFPRGLSRADDLRGEHRYNFSFSGLKTSVARYVEKAEREQSVISVEDVCASFQEAVCDVLTHKAILACQDTGAKVLLLGGGVAANSRLRELAAARCQTAGIELRVPRFKLCTDNGVMIAAVAAQLIHEGAPQSGLRIGTDTSLEVEIPLVYAAT
complement(611378..611869)         Ribosomal-protein-S18p-alanine acetyltransferase; CPTB_00577                         N/A                 MFLRELTAADAPRCAELETLLFSEENPWSVEDLRAAINHPHTLYIAVVDSLEKGLILGYAGLAMLGPAHDPEFEIHTIGVDPQFQRQGVARLMMDNITFVADRAAGPVFLEVRTTNEPAIRLYESYGFERQGVRKNYYQPSGADAYVMMRTPSAVESNEESGK
complement(611870..612544)         PROPHAGE_Escher_MG1655: protease specific for Gcp(YgjD), essential for nucleoid maintanence; CPTB_00578; phage(gi16129761)     7.95e-13            MLVLALDTATPDLIVGLVRVPSDTDTGVVVAQRILTDSRQHNELLTPTVVEILEESGQKFADIDRIVVGCGPGPFTGLRVGMVTAAAFGDALGIPVHGVCTHDAIANQLDGQALVATDARRKEIYWSLYSDGVRTMGPGIVAPTELSIPSRISTVSIPEKLGQLLPGPLRDVPQVNLRPLPECLVAVADFSQTPEPLEPLYLRRPDAKEPAPKPRSSAIPKVEI

#### region 2 ####
complement(1541801..1542631)       PHAGE_Bacill_G_NC_023719: gp283; CPTB_01478; phage(gi593777739)                      1.02e-102           MDTLRDTIKNRLRTRSAIDPAEEITARVDFLAQYLSASGARGFALGISGGQDSTLAGRLAQLAVEKLRKEGYPAEFWAIRLPYGVQADEEDARIALAFIRPDHSVTINIKPATDACAADVAQALGLETLNDFNKGNVKARQRMIAQYALAGEKGLLVIGTDHAAENVTGFFTKFGDGAADILPLAGLSKRQGAQLLQALNAPDSTWLKVPTADLEEERPALPDEVALGVTYSDIDTYIEGSGEVSEKAAARIEHLWKIGEHKRHLPVEPGDTWWRR
1542866..1542988                   LSU ribosomal protein L36p; CPTB_01479                                               N/A                 MKVRKSLRSLKNKPGAQVVRRRGKVYVINKKDPRFKARQG
1543470..1543703                   PHAGE_Mycoba_Adler_NC_023591: glutaredoxin-like protein NrdH; CPTB_01480; phage(gi589892251)     4.29e-25            MSITVYTKPACVQCNATKKALDRAGLDYTLVDISIDDEARDYVMALGYLQAPVVEVNGEHWSGFRPERISSLVAQVA
1543829..1544266                   PHAGE_Bacill_SP_10_NC_019487: ribonucleotide reductase stimulatory protein; CPTB_01481; phage(gi418489617)     5.19e-17            MLVVYFSSATENTKRFVQKLGFPAKRIPLHKSSPELVVDEPYVLVCPTYGGGASISGGNTRPVPAQVIRFLNNEHNRSLLRAVIAGGNSNFGLDFGKAGDTIAAKCKVPYVYRFELLGTDEDVRLVRDGLLGNAAALGLLPEPVA
1544417..1546576                   PHAGE_Entero_phiEF24C_NC_009904: putative ribonucleotide reductase; CPTB_01482; phage(gi158079505)     0.0                 MSQSLGKHVAEPVSRTEQLDYHALNALLNLYNADGKIQFDKDREAANQFFLQHVNQNTVFFHDLEEKIEYLVENNYYEPGIIEKYEFAFIKDLFKQAYAHKFRFKSFLGAYKYYTSYTLKTFDGRRYLERFEDRVCMVALTLADGDQNLARNLVDEIMTGRFQPATPTFLNSGKAQRGEPVSCFLLRIEDNMESIGRSINSALQLSKRGGGVALLLSNLREAGAPIKKIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDILNFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGKAFADISVSEHYAEMVEDPRIRKSKINAREFFQTIAEIQFESGYPYIMFEDTVNKANPIEGRVNMSNLCSEILQVNTPSLFNDDLTYEEVGEDISCNLGSLNIAMTMDSPDFAKTIETAIRGLTAVSEQTAINSVPSIRKGNDAAHAIGLGQMNLHGYLGREHIYYGSEEGLDFTNAYFAAVLYQCLVASNKLARERGRTFVGFETSKYATGEYFDGFDPADFAPKTEKVAKIFADSSIYTPTAADWADLKDSVAAHGLYNRYLQAVPPTGSISYINHSTSSIHPIASKIEIRKEGKIGRVYYPAPHMDNENLDYFADAYEIGFEKVIDTYAVATKYVDQGLSLTLFFKDSATTRDINRAQIYAWRKGIKTLYYIRLRQVALMGTEVEGCVSCML
complement(1546649..1547170)       Putative bacterioferritin; CPTB_01483                                                N/A                 MTHPILLLSIASMSINEKLAAALNNQITAELEASMVYLQLSYILDDLSLTGMRNWMQAQHKEELDHAAQFSKHLLDRDYRPQIGDIAPPKLDANSAVEAFEASLAHEQKVTAMIRELAEIADSVKDYDSRPLIDRFLEEQIEEEANVKEILDRLRIADTGSGILRIDAELAER
1547580..1548566                   PHAGE_Mycoba_PegLeg_NC_021299: NrdG; CPTB_01484; phage(gi508177953)                  0.0                 MESYDSYLESHKKPVSAINWNSIPDEKDLEVWDRLTGNFWLPEKVPVSNDLKSWGTLNDLEKTTTMRVFTGLTMLDTIQGTVGAVSMIPDAITPHEEAVYTNIAFMESVHAKSYSNIFMTLASTKEINEAFRWSEENENLQKKAKIVLSYYEGADPLKRKVASTLLESFLFYSGFYLPMYWSSHAKLTNTADIIRLIIRDEAVHGYYIGYKYQQAVREQTPERQEELKEYTFDLLYDLYDNEIQYTEDLYDDLGWTEDVKRFLRYNANKALNNLGYEGLFPADECKVSPAILSALSPNADENHDFFSGSGSSYVIGKAENTTDDDWDF
1548682..1548861                   hypothetical protein; CPTB_01485                                                     N/A                 MLWGGKGELTLYSSFGLITAGGEVGELVGVMYKYVPTLLCGAYHWNYLENAVFLAELIV
1549035..1550756                   PHAGE_Flavob_6H_NC_021867: cytochrome c oxidase subunit I; CPTB_01486; phage(gi526120183)     8.04e-13            MTAVAPRLEDYSEPTRPAPTGGARKGTLAWKMLTTTDHKQLGIMYIIMSFVFFFLGGLMALLIRAELFSPGLQYLSNEQFNQLFTMHGTVMLLLFGTPIVWGFANYILPLQIGAPDVAFPRLNAFGFWVTMIGAAAMLSGFLTPGGAADFGWTMYLPLADSIHSPGIGSDMWIVGVGATGVGTISSAINMITTILCMRAPGMTMFRMPIFCWNIFVASVLVLMIFPLLTAAALGVLYDRKLGGHLFDPGNGGAIMWQHLFWFFGHPEVYVLALPFFGIVSEIVPVFARKPMFGYIGLVFATLSIGSLSMAVWAHHMFVTGAILLPFFSFMTFLISVPTGVKFFNWLGTMWKGHVSWETPMTWTMGFLVTFLFGGLTGIMLASPPLDFHISDTYFVVAHFHYTLFGTVVFASFAGVYFWFPKMTGRMLDERLGKIHFWITFVGFHGTFLVQHWLGNEGMPRRYADYLDSDGFTTLNQISTIFSFLLGMSVLPFIWNVIKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTSLPRIRSERPAFELHYPHMVERMRREAHVGHHVEPVTVKAK
