gi|00000000|ref|CP009041.1|  Vibrio cholerae O1 biovar El Tor strain FJ147 chromosome II, 1046459, gc%: 47.02%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
708466..708480                     attL                                                                                 N/A                 TATGAATTGCATCTC
708533..709912                     PROPHAGE_Xantho_306: integrase; IR04_03440; phage(gi21242250)                        5.11e-06            MTHQENLSNPQEVNKKVTKRSHYDSLSLSVFSSNPINPDCRNGINPHIRDTQKIYFTTLKKHNTFYLRVSQRAKQAQRAKQAHREHLKNESVTVSLRTESRREAKMRSDYLKDRLLEQAGSFIDFNHMRETLKEIAKAELLRRPKVDWFYRGNIIVAQEALQEAQTVEQVRFIQSYSDIMKKGLQSDTEGLLSIIDSVDSEQSKHSEPQDHKEHKEHKESLTIDELIDNYIADKISSGEWMESTKEKKGAKLQHLKTIFEACSLKDKPIDKLTRNDLLEVRTALINRGLKTLTVNGYMQDIRAIFNNAEALGLIGKSPAVKLNIKDRDIKEPKALTESEVIALIDYFKHGYFTEARRSKKTLEGMKYLKWVPQIAAVTGARLNEILQLRKGDIRQSANGLCWYIDINDRGDNVVKNKSSNRIVPLVDGAYGFDLELFLSEIVNTCNEDSDNIFRLVVVN
complement(709905..710777)         PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; IR04_03445; phage(gi41057343)     2.35e-145           MIIKKLKQSHSVKILCEVFNVHRSSYHYWLKRPALINAETIKLRSLISEAHAASNGSAGARTIADIVTNQGVKLSRYRATKLMRTLGLVSCQEPKHRYRKASQEHIDVPNHLSRQFAVTAPNEVWAGDVTYIWTGNRWMYLAVVIDLFARKVIGWSMSLSPDSRLTGKALSMAYESRGKPKGVMFHSDQGSHYTSRKYRQLLWRFQIKQSLSRRGNCWDNAPIERFFRSLKTEWVPTVGYRSFAEAQQEITRYIIGYYCQLRPHQYNGGLTPNESERLYWENSKTVANFS
complement(710774..711082)         PROPHAGE_Xantho_33913: ISxac3 transposase; IR04_03450; phage(gi21231087)             2.94e-08            MTKRTRRLFSAEFKLEAAQLVLDQNYSVTEAAQAMNVGKSTMDKWVRQLREERQGKTPKASPMTPEQIEIRELKKKLARLEEHNEILKKATALLMSDSLNNS
711195..711677                     PHAGE_Shewan_1/40_NC_025470: Rha-like protein; IR04_03455; phage(gi722121079)        8.19e-05            MNKKEIQAYQSAFEKFNPFYGVDFPITSVKLCELINKMRNDHNEKVVELRHDHLMNKIREFSEQVNAPNFRVVESSYKDTKGEDRKCYLLGKTECRAIAATESKSVCYMIMVYLDQLEQIFEKAKEAKATEFDRKLSKQGVTWREACRTVGIEHPDLALK
711678..711971                     hypothetical protein; IR04_03460                                                     N/A                 MIKRGFFKRDFDGGLVVKPSLLADKSFKKADNLGINKEGFRVLTNGFKKLQEAAERIKWQCLQFSDRPKLQAMYKAKLEEHMKNQPKVYDEQGFEVE
712294..713142                     PHAGE_Ralsto_RSM3_NC_011399: hypothetical protein; IR04_03465; phage(gi209901327)     2.06e-21            MKYSLIKLSAMNSYSDCQQAIEDIEADPENYTTETRAAARIGGHCELLKGAKEKIKALEKKADSFIPSDDSEEVNTVSETSQRTYGYGRVSTDEQTTSQQLTAIREAGHKVSDNRFIVDEGVSGGVCAMERPAFRNLVENKLEKGDTLVIAKLDRLGRDNIDVQQVVQMLTDKGIKLFILDLPVADLSSPEGKLMLQMFATFAEFEKNRISERIRDKLKQLKQEGKALGRPTKNVYDDVQELKAQGISQRTIADKLNVSLSTVRRNWVDTKRSLEVVTESGQ
713223..713237                     attR                                                                                 N/A                 TATGAATTGCATCTC
713380..713601                     transcription initiation factor TFIIIB; IR04_03470                                   N/A                 MNNRLVEETIAEETIDCCPLCQHDEFFISADKEKFYCAKCGFHTNTLTSIQPMLAAKANLTHRFVHTGIKTRQ
complement(713797..714477)         HAD family hydrolase; IR04_03475                                                     N/A                 MTESRVKCVIFDCEGTLVDSERLCCEALVQVFGELGVALSYQQVAEHFSGGKIADILHAACQLAKITADIDLLEQRYRSIVAATFRRKLSPMGGARALLNYLKRNQIEFCVASNAPREKIAMTLTLAGLEHYFEGRIFSAFDANSWKPEPDLIRYCAMNMGFTLDECIYVDDTPKGVEAGLNAEVLTFQLSPLNPQHRSHSQQVIVLSNLLQLAEYLSGSVMRQSA
complement(714616..715122)         hypothetical protein; IR04_03480                                                     N/A                 MIYSPSPVVAAKNQWLSSQVDVEFPTAQSLEGRDIYHALSRHTEVSLFQPQACDAPLLQEIYLVDFHRLTVWFALLQATRSSTQHEQERLVEFFTQIIYSPPCQLFLGFHLGEPVAAGMVTEHEHMVLLSDLVVKPNPLFDTREAFAQALYAKWQAITASDATPYIEL
715444..715926                     PHAGE_Aeromo_phiAS5_NC_014636: hypothetical protein; IR04_03485; phage(gi310722759)     6.03e-09            MLNSIRTALLLSFAFVLSGCDRSEVGDVSLGMFTLKDIKINNLTDPVVTGVTCHVASIEADLSLADPSDSSISCRQTGEITPEMIAQIDKSSSGEVVFQKSKSIFFKSMKIRRIFDAKNQTLMYLSYSTKETSGSFKHSLSTVPLWGTQAYNAFPETQNK

#### region 2 ####
872002..873123                     PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; IR04_04150; phage(gi371496158)       8.54e-33            MASVTLKNVCKAYGDVLISKNVDLEIQEGEFVVFVGPSGCGKSTLLRCIAGLEDITSGDLYIGEQRMNDVEPSKRGVGMVFQSYALYPHLNLYDNMSFGLKLSKADKSEIKKRVDHAAEILQLSHLLDRQPKALSGGQRQRVAIGRTLVSQPNVFLLDEPLSNLDAALRVQMRSEITKLQRKLGCTMIYVTHDQVEAMTMADKIVVLDAGFVSQVGKPLELYHYPQNRFVAGFIGSPKMNFMSVFIEGVEKDRVQVQLSNGTTFWIPVDGTTVTRGERMSLGIRPEHLVEAEHGDAKIEGKVMIVEKLGNETQVYMNLKGSDSDVIYRQPDTLDVETGDTLTIGIPAHRCHLFHSDGRACRRLHKEKGVDLPA
873346..873867                     PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; IR04_04155; phage(gi9630137)     2.10e-11            MNSQLTLRALERGDLRFIHNLNNNRNIMSYWFEEPYESFDELEELYNKHIHDNAERRFVVEDAQKNLIGLVELIEINYIHRSAEFQIIIAPEHQGKGFARTLINRALDYSFTILNLHKIYLHVAVENPKAVHLYEECGFVEEGHLVEEFFINGRYQDVKRMYILQSKYLNRSE
873872..874117                     transcriptional regulator; IR04_04160                                                N/A                 MVSCSQYDYIELACLFHLPVKLTMKSGEVYYGVAADTQRNSQKQECIALRGEEETWLLETDQLSSMEALSEQPHFSVIHFK
complement(874255..874863)         PHAGE_Cyanop_P_TIM40_NC_028663: hypothetical protein; IR04_04165; phage(gi966198291)     1.19e-05            MALDGLMDAIADRGWYVWDDFLNPQEVQALRECIPERWKRAKIGRNEEIQRAADIRSDKIQWLDLSMGQPVQDYLERMEQIRCEVNRHFFLGLFEYEAHFAKYEAGDFYLKHLDSFRGNENRKLTTVFYLNENWTPADGGELKIYDLQDNWIETLAPVAGRLVVFLSERFPHEVLEAHADRVSIAGWFRTNGVSGNKLDIAN
875079..875399                     PHAGE_Rhodov_RS1_NC_020866: hypothetical protein; IR04_04170; phage(gi472342875)     3.81e-19            MIVTTTPNIEGKRIVRYCGVIAGEAILGANIFKDLFAGIRDIVGGRSGTYERELEKARAIALEELQQHAVALGANAVVGIDLDYETFGKANGMLMVSVSGTAVVVE
complement(875566..876240)         PHAGE_Altero_vB_AmaP_AD45_P1_NC_021532: hypothetical protein; IR04_04175; phage(gi514051613)     4.30e-06            MKDENKLNVRMLSDVCMQSRLLKEALESKLPLALEITPFSELWLEENKPESRSIQMLVIDYSRISDDVLTDYSSFKHISCPDAKEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIKGMSKILQDEMWLTRKLAQEYILHYRAGNSVVTSQMYAKLTKREQQIIKLLGSGASNIEIADKLFVSENTVKTHLHNVFKKINAKNRLQALIWAKNNIGIEEVNS
complement(876818..877096)         peptidylprolyl isomerase; IR04_04180                                                 N/A                 MARTAAALHILVKHKEQADDILAQLKKGAKFHVLAKKYSTCPSGKKGGDLGEFRQGQMVPAFDKACFQGEVLTPQLVKTKFGWHVVKVLYRT
877271..878191                     chemotaxis protein CheW; IR04_04185                                                  N/A                 MAKVVSKANQSQGMLMFTLSAQQQLFAIGTLKVREIVTYQPMTQIPYSHHHVIGTVTIRNLTVPVIDMAAAIGFRPIQPSEYQKCYLIVTDCLRTVVAFMVRTIEKIIECDWRQIESSPETAGHDVFVTGITRFQNKIVQLLDVELLLSKIYPQYESTKVPMLTDIERERLKPLNILLVDDSSIARKQLSDALDSINIPYHICKNGSEALDLMRDMARDHRAIDILVSDIEMPGLDGYELAFEMQNDPQLNHAYCILHTSLSSEICVDRAHQVGAHEALEKFNATELVEAMLRGAKKLQTQRLQKS
complement(878267..878791)         MarR family transcriptional regulator; IR04_04190                                    N/A                 MDSVQKSVMEWANELPELNTLPMSVLHRLQRLARRIELKMEAFYQQAGLTAGEFEVLMTLRGVGHPYCLNPSDLQVRLLLSSGAMTNRLTRLERKGLVERNLSRYDRRNVEVTLTEAGRQRIELWLPEYCDLQSSLLAKFSEVEQETLSTQLQEWLSHHEQLWCIPDLLNSRQR
878963..879979                     PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; IR04_04195; phage(gi100150)      1.87e-18            MTTEDFKKSTANLKKVVPLMMKHHVAATPVNYALWYTYVDQAIPQLNAEMDSVLKNFGLCPPASGEHLYQQYIATKAETNINQLRANVEVLLGEISSSMSDTLSDTSSFANVIDKSFKDLERVEQDNLSIEEVMTVIRRLVSDSKDIRHSTNFLNNQLNAATLEISRLKEQLAKVQKDALFDSLSGLYNRRAFDGDMFTLIHAGQQVSLIMLDIDHFKALNDNYGHLFGDQIIRAIAKRLQSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRRSIEKLTVKDRRSGQSVGSITASFGVVEKIEGDSLESLIGRADGLLYEAKNLGRNRVMPL
