gi|785752771|ref|CP009042.1|  Vibrio cholerae O1 biovar El Tor strain FJ147 chromosome I, [asmbl_id: NC_000000].3045476, gc%: 47.68%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1647401..1647412                   attL                                                                                 N/A                 ACATACATAATA
complement(1647439..1647663)       PHAGE_Vibrio_CTX_NC_015209: RstC; IR04_12500; phage(gi332672298)                     2.99e-48            MSLKPYTLMDVYDSLEDLNNMALYLRSGAYTDEIAHQVQNLICDKIIDLQGIVNFIRLSPSLNPQLKALTEPSL
complement(1647757..1648107)       PHAGE_Vibrio_CTX_NC_015209: RstB; IR04_12505; phage(gi332672297)                     4.57e-82            MKSRFVVFGASHSEGVSKTGAPYLIPVLFVGKPIRQWKNDKGQCLTFGLQHQEVKFVSSDAMTRKLEQTAFPVLVTFDNEPDPEDPSRNLVIDYQVVCSLFDNVPGGKPLDKPNKI
complement(1648109..1649188)       PHAGE_Vibrio_CTX_NC_015209: RstA; IR04_12510; phage(gi332672300)                     0.0                 MKKQIFTLDELQLDTNASPFVFVDYLAWSVPYASFRHAHKSDLSSLIWAPLPKPDYRMARTPEQKEKLIELYKQKWNVAMMERLEVFCLHVLGLRMSPWRDKGLYGYENSCHLMSKYSNKHVGFVALGGNRNTCYFQIEGVGCRTVLEHTSLFRLHWWLDLLGCSRLSRIDLAVDDFHGLFGREYAKKAYSDDAFRTARAGRAPNGGERLVSEPNGKIINESFEVGSRESRIYWRIYNKAAQLGLDMHWFRNEVELKDMPIDVLLNIEGYFAGLCAYSASIINSLPVKVVTKKRQVALDIHSRIKWARRQVGKTLFDISKHFGGDLERVFGALISKEIHDDSLNLPDSYMKLIDEIMGD
1649314..1649652                   PHAGE_Vibrio_CTX_NC_015209: RstR; IR04_12515; phage(gi332672299)                     1.19e-76            MKIKERLANQRKAINKTQAQMADEIGISLTSYKKYESGEGLPTMENLVKIADALEISIDELCGRWATDENQELMLRLKKIQQLDEEEQKAISMVLESMLIRHSTKSILNHGA
complement(1650254..1650628)       PHAGE_Vibrio_CTX_NC_015209: CtxB; IR04_12520; phage(gi332672307)                     8.50e-90            MIKLKFGVFFTVLLSSAYAHGTPQNITDLCAEYHNTQIHTLNDKIFSYTESLAGKREMAIITFKNGATFQVEVPGSQHIDSQKKAIERMKDTLRIAYLTEAKVEKLCVWNNKTPHAIAAISMAN
complement(1650625..1651401)       PHAGE_Vibrio_CTX_NC_015209: CtxA; IR04_12525; phage(gi332672306)                     0.0                 MVKIIFVFFIFLSSFSYANDDKLYRADSRPPDEIKQSGGLMPRGQSEYFDRGTQMNINLYDHARGTQTGFVRHDDGYVSTSISLRSAHLVGQTILSGHSTYYIYVIATAPNMFNVNDVLGAYSPHPDEQEVSALGGIPYSQIYGWYRVHFGVLDEQLHRNRGYRDRYYSNLDIAPAADGYGLAGFPPEHRAWREEPWIHHAPPGCGNAPRSSMSNTCDEKTQSLGVKFLDEYQSKVKRQIFSGYQSDIDTHNRIKDEL
complement(1651500..1652699)       PHAGE_Vibrio_CTX_NC_015209: Zot; IR04_12530; phage(gi332672305)                      0.0                 MSIFIHHGAPGSYKTSGALWLRLLPAIKSGRHIITNVRGLNLERMAKYLKMDVSDISIEFIDTDHPDGRLTMARFWHWARKDAFLFIDECGRIWPPRLTVTNLKALDTPPDLVAEDRPESFEVAFDMHRHHGWDICLTTPNIAKVHNMIREAAEIGYRHFNRATVGLGAKFTLTTHDAANSGQMDSHALTRQVKKIPSPIFKMYASTTTGKARDTMAGTALWKDRKILFLFGMVFLMFSYSFYGLHDNPIFTGGNDATIESEQSEPQSKATVGNAVGSKAVAPASFGFCIGRLCVQDGFVTVGDERYRLVDNLDIPYRGLWATGHHIYKDTLTVFFETESGSVPTELFASSYRYKVLPLPDFNHFVVFDTFAAQALWVEVKRGLPIKTENDKKGLNSIF
complement(1652696..1652980)       PHAGE_Vibrio_CTX_NC_015209: Ace; IR04_12535; phage(gi332672304)                      1.51e-61            MMDTLYDWLIDGFTWLVIKLGIMWIESKIFVIQFFWEMSQKVIDMFTIYPLIQQAIDMLPPQYSGFLFFLGLDQALAIVLQALMTRFALRALNL
complement(1652986..1654173)       PHAGE_Vibrio_CTX_NC_015209: hypothetical protein; IR04_12540; phage(gi332672303)     0.0                 MRYFLLFLTLLFLSPSVTASAINCDPNTTTSHQLLFGFGSPIVQSVLFDGCMLDIEKDDYGFVWSCLSNENGDYCKGLYKPRFSQGVSPNWPMCDLSGASAERCIYPYCPEGEECVPLPPSPPSDSPVDGLSSSFKSAFNQVYKNQSEMASTLNHVSGQVSHSQDMVQLNTKFHADRVLESVTAVNNRLGGQMEYLEEIRIDVWDTQREVRKAKDELYSRVAAVSYDVLYSELNVLRAIDELKDSLGGTVVPPNPDQPNPTPPDSSSPNYTGALNTISKKLNTLETISQQLDTMNTALSGRCSNPERCQFPIREAETELETAQQNLKQMINEKITQSALHQFKGSAAVPSFCSYVEAFGYNLCFDFSLFSENLHIIRMIVLAMAYILAAMLILFR
complement(1654280..1654528)       PHAGE_Vibrio_CTX_NC_015209: Cep; IR04_12545; phage(gi332672302)                      1.78e-49            MFSSLKNKLNTFKSTLSLGVFLLFSAFANQALAAADAGLVTEVTKTLGTSKDTVIALGPLIMGVVGAIVLIVTVIGLIRKAK
complement(1654664..1655023)       PHAGE_Vibrio_CTX_NC_015209: RstB; IR04_12555; phage(gi332672301)                     4.10e-84            MKSRFVVFGASHSEGVSSKTGAPYLIPVLFVGKPIRQWKNDKGQCLTFGLQHQEVKFVSSDAMTRKLEQTAFPVLVTFDNEPDPEDPSRNLVIDYQVVCSLFDNVPGGKPLDKPQPIKS
complement(1655025..1656104)       PHAGE_Vibrio_CTX_NC_015209: RstA; IR04_12560; phage(gi332672300)                     0.0                 MKKQIFTLDELQLDTNASPFVFVDYLAWSVPYASFRHAHKSDLSSLIWAPLPKPDYRMARTPEQKEKLIELYKQKWNVAMMERLEVFCLHVLGLRMSPWRDKGLYGYENSCHLMSKYSNKHVGFVALGGNRNTCYFQIEGVGCRTVLEHTSLFRLHWWLDLLGCSRLSRIDLAVDDFHGLFGREYAKKAYSDDAFRTARAGRAPNGGERLVSEPNGKIINESFEVGSRESRIYWRIYNKAAQLGLDMHWFRNEVELKDMPIDVLLNIEGYFAGLCAYSASIINSLPVKVVTKKRQVALDIHSRIKWARRQVGKTLFDISKHFGGDLERVFGALISKEIHDDSLNLPDSYMKLIDEIMGD
1656230..1656568                   PHAGE_Vibrio_CTX_NC_015209: RstR; IR04_12565; phage(gi332672299)                     1.19e-76            MKIKERLANQRKAINKTQAQMADEIGISLTSYKKYESGEGLPTMENLVKIADALEISIDELCGRWATDENQELMLRLKKIQQLDEEEQKAISMVLESMLIRHSTKSILNHGA
complement(1657058..1657495)       hypothetical protein; IR04_12570                                                     N/A                 MNPCIFHYWLSVLEKRVLPRSGLEGKRWQGWYFDEGKLVTPLGHRLGAAQIEDQQNQINQTRAVYRQAHKVREHAKSGLHEAGESWFGWQFKGGFLVSPDERKIAADELYVMMVGYDAMTYAKAYKKPPIDTAKATVLNLETKCS
complement(1657635..1657802)       helicase; IR04_12575                                                                 N/A                 MQGHHTREDAKTTEATEQRLLQVFKRDKELSAALGVFERKLGIPEQETVIRICYD
complement(1657880..1658572)       DNA-binding protein; IR04_12580                                                      N/A                 MNLNQLTGADLMAARTHIGLSISAVAKLTGINRNTLSQFEQEKASLSGSEKKRLAGCYEERGYHFDEPQTTDETVLATRYDDARERLVDAAYDVNMNGLGEAVLALADASHDLLSMLARPMDVAQEEVELDAVELPESYLEMHNVLQRHFLADKAGQMQGKVGFFKEDADERSAKLIAYMAQQYLTLLHAEMPEVVSLERDSLDDDSDNARVLDALANWTFYDALKEMTV
complement(1658702..1658971)       hypothetical protein; IR04_12585                                                     N/A                 MGISHRKGISNKGLGKPYEMHKIHFATPIETIDTPNMSLSGRGLQEQTLDIDPLCLPQFDKVSPLSEVNVSVEPKPSNFTQTWVVGLTQ
complement(1658991..1660505)       PHAGE_Entero_Ike_NC_002014: replication initiation protein; IR04_12590; phage(gi9626233)     1.49e-73            MGDCGFVDFAKLAEKTELKIACGNVEFSVVNDQKKVRTDDLYHPWSTIPSSYTDIACKVFDAEPRANVFWGYLQLKASPAKVMQGHNVYGSEDFRLCVEYLLDSLQKAQPELWELLDVGLAEMTRIDCTYSIKCANPDILRQTIKQMGNVSNRYIKPARNSDFETTLYFNRATKANPGAGRSFELCIYTKHDEIAHQLADLKRRARQGDSDRFNRIIDELSKPELQAFAANRLRFEGRAKKRFIQKHVGSANLWQVIRHAEQFEAKNGYRFCEWMFKTLFHDLLESLKGEELELYNDSKIKQLLRDAYSTMTPKGNISYAKADRLFRFYMTLCDRGYQELKAHSSKATLHRNMRDLMAIGFSKADLQNLSEGERMPLAQVLNFNFDNQRPANYVEPVSPTAHIQDMSHLAVAYGVSKRLAHELGLAEDPIHNLKEKLGLKDDIDIDALIEGQSIPISPRRALSLVIWPDGEMILTEHDITPDLFTGGVNPVNHRNRKAANQPRG
1660736..1661287                   XRE family transcriptional regulator; IR04_12595                                     N/A                 MSEVSIADRIKKAIIDNGGYQNISDVTGISKSTLARMAANQTEPKLKDVMAISKATGVSLNYIAYGMLTEDEEESALNEKKMFNLILNLVNHVSREVEELRAKVGVNDPKGNLNARRTIDGLSKDITDSVTDGADINNLSPEALGIDSKEHIELLFDLLNEESKRRNSNLDTMLEPTQPHKSK
complement(1662486..1662653)       helicase; IR04_12605                                                                 N/A                 MQGHHTREDAKTTEATEQRLLQVFKRDKELSAALGVFERKLGIPEQETVIRICYD
complement(1662731..1663423)       DNA-binding protein; IR04_12610                                                      N/A                 MNLNQLTGADLMAARTHIGLSISAVAKLTGINRNTLSQFEQEKASLSGSEKKRLAGCYEERGYHFDEPQTTDETVLATRYDDARERLVDAAYDVNMNGLGEAVLALADASHDLLSMLARPMDVAQEEVELDAVELPESYLEMHNVLQRHFLADKAGQMQGKVGFFKEDADERSAKLIAYMEQQYLTLLHAEMPEVVSLERDSLDDDSDNARVLDALANWTFYDALKEMTV
complement(1663553..1663822)       hypothetical protein; IR04_12615                                                     N/A                 MGISHRKGISNKGLGKPYEMHKIHFATPIETIDTPNMSLSGRGLQEQTLDIDPLCLPQFDKVSPLSEVNVSVEPKPSNFTQTWVVGLTQ
complement(1663842..1665356)       PHAGE_Entero_Ike_NC_002014: replication initiation protein; IR04_12620; phage(gi9626233)     1.49e-73            MGDCGFVDFAKLAEKTELKIACGNVEFSVVNDQKKVRTDDLYHPWSTIPSSYTDIACKVFDAEPRANVFWGYLQLKASPAKVMQGHNVYGSEDFRLCVEYLLDSLQKAQPELWELLDVGLAEMTRIDCTYSIKCANPDILRQTIKQMGNVSNRYIKPARNSDFETTLYFNRATKANPGAGRSFELCIYTKHDEIAHQLADLKRRARQGDSDRFNRIIDELSKPELQAFAANRLRFEGRAKKRFIQKHVGSANLWQVIRHAEQFEAKNGYRFCEWMFKTLFHDLLESLKGEELELYNDSKIKQLLRDAYSTMTPKGNISYAKADRLFRFYMTLCDRGYQELKAHSSKATLHRNMRDLMAIGFSKADLQNLSEGERMPLAQVLNFNFDNQRPANYVEPVSPTAHIQDMSHLAVAYGVSKRLAHELGLAEDPIHNLKEKLGLKDDIDIDALIEGQSIPISPRRALSLVIWPDGEMILTEHDITPDLFTGGVNPVNHRNRKAANQPRG
1665587..1666138                   XRE family transcriptional regulator; IR04_12625                                     N/A                 MSEVSIADRIKKAIIDNGGYQNISDVTGISKSTLARMAANQTEPKLKDVMAISKATGVSLNYIAYGMLTEDEEESALNEKKMFNLILNLVNHVSREVEELRAKVGVNDPKGNLNARRTIDGLSKDITDSVTDGADINNLSPEALGIDSKEHIELLFDLLNEESKRRNSNLDTMLEPTQPHKSK
1666483..1666800                   PROPHAGE_Xantho_33913: ISxac3 transposase; IR04_12630; phage(gi21231087)             2.63e-08            MTKRTKRTRRLFSAEFKLEAAQLVLDQNYSVTEAAQAMNVGKSTMDKWVRQLREERQGKTPKASPMTPEQIEIRELKKKLARLEEHNEILKKATALLMSDSLNNS
1666797..1667669                   PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; IR04_12635; phage(gi41057343)     1.69e-145           MIIKKLKQSHSVKILCEVFNVHRSSYHYWLKRPALINAETIKLRSLISEAHAASNGSAGARTIADIVTNQGVKLSRYRATKLMRTLGLVSCQEPKHRYRKASQEHIDVPNHLSRQFAVTAPNEVWAGDVTYIWTGNRWMYLAVVIDLFARKVIGWSMSLSPDSRLTGKALSMAYESRGKPKGVMFHSDQGSHYTSRKYRQLLWRFQIKQSLSRRGNCWDNAPIERFFRSLKTEWVPTVGYRSFAEAQQEITRYIIGYYCQLRPHQYNGGLTPNESERLYWENSKTVANFS
1668526..1668537                   attR                                                                                 N/A                 ACATACATAATA

#### region 2 ####
2016659..2016670                   attL                                                                                 N/A                 AACGCCGCACTT
complement(2019086..2019262)       PHAGE_Entero_P4_NC_001609: transcriptional regulator; IR04_14105; phage(gi9627517)     3.08e-13            MRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR
2019406..2019882                   hypothetical protein; IR04_14110                                                     N/A                 MTHFPRHRYLLSQRAYEHRVLEEAAEILEQRYVRGETFARTENTTEYLRCKLAGYEHEIFAVLFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADRRITQRLKDALSLVDIRVLDHVVVGKSSVSFAERGWL
complement(2020112..2020678)       chemotaxis protein; IR04_14115                                                       N/A                 MIGDMVLGGKKGAAGAGSLSALGATPVYVVNMPNGGLGGPDVNFPDNKKPNKSLFNASNLANIPLIGWASYELADLTDSVLSSNFDGYREADAKFTTKMKAFFGDKEAQAQDVQYYGADPAKYEVKPMSPPEYMTGGYNRSPISTPSSYLAAQAGEMKLKVEVSDDRVKVTPTYLPKGFSVDPDTGIN
complement(2020804..2021676)       PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; IR04_14120; phage(gi41057343)     1.69e-145           MIIKKLKQSHSVKILCEVFNVHRSSYHYWLKRPALINAETIKLRSLISEAHAASNGSAGARTIADIVTNQGVKLSRYRATKLMRTLGLVSCQEPKHRYRKASQEHIDVPNHLSRQFAVTAPNEVWAGDVTYIWTGNRWMYLAVVIDLFARKVIGWSMSLSPDSRLTGKALSMAYESRGKPKGVMFHSDQGSHYTSRKYRQLLWRFQIKQSLSRRGNCWDNAPIERFFRSLKTEWVPTVGYRSFAEAQQEITRYIIGYYCQLRPHQYNGGLTPNESERLYWENSKTVANFS
complement(2021673..2021981)       PROPHAGE_Xantho_33913: ISxac3 transposase; IR04_14125; phage(gi21231087)             2.12e-08            MTKRTRRLFSAEFKLEAAQLVLDQNYSVTEAAQAMNVGKSTMDKWVRQLREERQGKTPKASPMTPEQIEIRELKKKLARLEEHNEILKKATALLMSDSLNNS
complement(2022024..2022983)       PHAGE_Rhizob_RHEph06_NC_027296: putative tail protein; IR04_14130; phage(gi848469511)     2.81e-28            MTTLATRSKAAFSMISSSAIAASRGIDTFGNRLLFITGAAAVGFERTFVKTAAEFERYQTMLNKLQGSPEAGAKAMAWIEEFTQNTPYAIDEVTQSFVRLKAFGIDPMDGTMQSIADQAAMIGGTAETVEGIATALGQAWTKGKLQSEEALQLLERGVPVWDYLIKSSKELGMNNGRGFTKEELDDMSSKGKLGRDAIRALIKQMGKESAGAAKEQMNTWNGMISNMGDHWKLFQKDVMGSGAFTVLKDQLGEFLGMLDEMKKTGEYDEFVDKVGRDLVEAFKSAAAAAREIKEVGEELWPVIREIGSMACSGIVNLVT
complement(2023199..2023558)       PHAGE_Vibrio_12B12_NC_021070: extracellular solute-binding protein family 7 protein; IR04_14135; phage(gi481019155)     1.05e-38            MAVMTFNLEDGFKVGDAQCHEVGLKELTPKDVFDAQLASEKIGILNGRPHAYTSDVQMGMELLCRQVEFIGNVQGPFSVKEILKLSSRDFATLQQKARELDDIMFSDDALEGLEARGRD
complement(2023607..2023978)       6-phospho-beta-glucosidase; IR04_14140                                               N/A                 MEHVYQLVDGIVFKGKLQKQVTLHPIDSVSYDLVEQLVEEQLQHIQNQADVVLVNDSHLQGLKGYMLLNESAASSISKIGDENVDLMFFDLCQLKISAQDWNVILTANLAIAEYYANQAAMLA
complement(2024039..2024617)       glyoxalase; IR04_14145                                                               N/A                 MSLSTLQAELASAKTEYEAKELEIRNLFSEKNTQERRLQTLVAQVAAKRKELSNALSQSSAETLTSELQSLESQYQACQTLINNISNYLTVKAGLDKKNASELVERAQKNLLNFIYNSIKSELKVLTDEQVELMKDFVVIEKLIRSELSDSVRQSYFLGCVFDELYGQLKGSDFTSHKEKMLKKYDAESSIG
complement(2024636..2024956)       transcriptional regulator; IR04_14150                                                N/A                 MAPTDNQRSLVISKLTPSAQVLYRALDEAIKQSAGKPDALKIVIELSEKLGGRTFYFSLGTVARRTQRNIDLFADHESGMSVRELSKKYKLSFVSVFNVIRKFKTS
complement(2024943..2025317)       PHAGE_Entero_Mu_NC_000929: Mor; IR04_14155; phage(gi9633507)                         4.07e-09            MLAIERAIPLVVDALSKDSGLFSFDDLESGDALYPELLSDVHDIFLGVIEDAGIEDNGLALHLVFKLMEYGNGVQFYLPKPDSIVKTIIKKMMKNDFNGSNYVELAKRYQCSTNHVRRVINGTH
complement(2025897..2026130)       hypothetical protein; IR04_14160                                                     N/A                 MNNHHLSAAESHELATRVSALGAKQVLLILRQIQDQSLDSSMKNRGLIYERALRTKTEAGSTAKIGHALLDHHTRPH
complement(2026127..2026588)       hypothetical protein; IR04_14165                                                     N/A                 MNNQNDNGLLPFNVGELVSAVHFDCNDFDTADYIPSVQLRQDLHDKLGCAVSNLNSILSIYNQWKQGQLSCNWSAVSELTLRTQVVSGQFKTISQMCRNDRNGMVYNPLLNDGIPDLSKGLTPLECSELKALLDGLHPIELLQLLRHQKGSLV
complement(2026591..2027433)       PHAGE_Pseudo_B3_NC_006548: putative transposase B subunit; IR04_14170; phage(gi56692579)     4.55e-54            MLTQEAMKHFKLFRNPFINDIRAVRDIYMNEDSRYVLAAMKDVARNQGILAVVGDSGAGKSVLRRLLLDELHNDGDISVIQPKIIDKTRATAAGICDAIISDISSEAPKRSMEAKARQVERLLMTAFKGGQRHVLIIEEAHDLTIPVMKYLKRFWELEDGFSKLLGILLVGQTELFHRLDERRHYELREFIRRCMVIEVPPLDNDIEAYLKHKFERAGCEYERIMDDSAVPALKLRLQTRRNQSGSLVYPQVINNLVTKAMNLCASLGEDKVNEDIIKEL
complement(2027672..2029429)       PHAGE_Pseudo_B3_NC_006548: putative transposase A subunit; IR04_14175; phage(gi56692580)     5.16e-110           MNALELERAQYLKRLMSDLDRSGRGQKGVIVQAAMDHLCISKSKLYQELTDLGWTSGRKTRADNGDLALTKEETELLSNMIRQSKRESGKALMTVRDAVDIALANGELTRHVSESTVLRAFKRFRVHPDQLDMMETTMSQRSLFPNHAWQFDVSICVLYYLRGGKGLQVMSKDEFYKNKPKNLDRIVNERVLRYLATDHYSGAFFLRYYLAPGENTETITQFLLEAFCERDTGELMYGVPQILIWDAGSANIAHQTRHMLDMLEVKHIAHTPGRPWAKGQVESTHNLVERRFEGRLAFMTVQSIEELNRHAVQWSIGFQSLKEHSRHKNSRFGLWQTIRAEQLRLIKDVNLVKSMMQQTKPEVRKVRPNELSISFAPKGYASMDYSLAHIPHLIAGDEVKVFANPYKAPAIRVISVDDSGQEHTHEATPIERDAAGFNLLAPIIGAEHKSVRETDADHNRKRLDIQAWGTDNPRDIKKLRKGKVAAFDGRINPMADIEQQVVPSFMPRRGTVMSMEGQPLTEQKMSFIGALNRLQRRLNPTKEELAVMRKVLKQQYPDGMTDNELQVFTEQWEQKGNEHAQSATR
2037449..2037460                   attR                                                                                 N/A                 AACGCCGCACTT
