gi|00000000|ref|CP009115.1|  Klebsiella pneumoniae strain blaNDM-1 plasmid plasmid2, complete 118061, gc%: 52.69%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
8460..9728                         PROPHAGE_Brucel_1330: transposase, putative; FH42_25770; phage(gi23501616)           1.01e-33            MATDTPRIPEQGVATLPDEAWERARRRAEIISPLAQSETVGHEAADMAAQALGLSRRQVYVLIRRARQGSGLVTDLVPGQSGGGKGKGRLPEPVERVIHELLQKRFLTKQKRSLAAFHREVTQVCKAQKLRVPARNTVALRIASLDPRKVIRRREGQDAARDLQGVGGEPPAVTAPLEQVQIDHTVIDLIVVDDRDRQPIGRPYLTLAIDVFTRCVLGMVVTLEAPSAVSVGLCLVHVACDKRPWLEGLNVEMDWQMSGKPLLLYLDNAAEFKSEALRRGCEQHGIRLDYRPLGQPHYGGIVERIIGTAMQMIHDELPGTTFSNPDQRGDYDSENKAALTLRELERWLTLAVGTYHGSVHNGLLQPPAARWAEAVARVGVPAVVTRATSFLVDFLPILRRTLTRTGFVIDHIHYYADGHCCK
9775..10185                        PROPHAGE_Brucel_1330: transposase, putative; FH42_25775; phage(gi23502708)           7.58e-38            MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNKGSDAQWNENSR
complement(10296..11156)           PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; FH42_25780; phage(gi100066)       5.20e-57            MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGASLIKHW
complement(11339..11590)           PHAGE_Salmon_SJ46_NC_031129: prohead core protein protease; FH42_25785; phage(gi100061)     4.13e-06            MGQMVVTILSAVAQAERRRILERTNEGRQEAKLKGIKFGRRRTVDRNVVLTLHQKGTGATEIAHQLSIARSTVYKILEDERAS
complement(11856..12233)           oxacillinase-carbenicillinase; FH42_25790                                            N/A                 MTQSWLMSSLTISPKEQIQFLLRFVAHKLPVSEAAYDMAYATIPQYQAAEGWAVHGKSGSGWLRDNNGKINESRPQGWFVGWAEKNGRQVVFARLEIGKEKSDIPGGSKAREDILVELPVLMGNK
complement(12740..13528)           adenylyltransferase; FH42_25795                                                      N/A                 MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPHSDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAKRELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQPVILEARQAYLGQEDRLASRADQLEEFVHYVKGEITKVVGK
complement(13598..14203)           PHAGE_Staphy_SPbeta_like_NC_029119: bifunctional AAC/APH; FH42_25800; phage(gi985761240)     4.80e-16            MSIQHFQTKLGITKYSIVTNSNDSVTLRLMTEHDLAMLYEWLNRSHIVEWWGGEEARPTLADVQEQYLPSVLAQESVTPYIAMLNGEPIGYAQSYVALGSGDGWWEEETDPGVRGIDQLLANASQLGKGLGTKLVRALVELLFNDPEVTKIQTDPSPSNLRAIRCYEKAGFERQGTVTTPDGPAVYMVQTRQAFERTRSVA
complement(14386..14943)           PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; FH42_25805; phage(gi100036)       3.74e-27            MRIFGYARVSTSQQSLDIQIRALKDAGVKANRIFTDKASGSSTDREGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVAVRFIDDGISTDGDMGQMVVTILSAVAQAERRRILERTNEGRQEAKLKGIKFGRRRTVDRNVVLTLHQKGTGATEIAHQLSIARSTVYKILEDERAS
15107..15325                       transposase; FH42_25810                                                              N/A                 MPVDFLTTEQTESYGRFTGEPDELQLARYFHLDEADKEFIGKSRGDHNRLGIALQIGCVRFLGTFLTDMNHT
15507..16769                       PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; FH42_25815; phage(gi100067)       3.19e-53            MINKIDFKAKNLTSNAGLFLLLENAKSNGIFDFIENDLVFDNDSTNKIKMNHIKTMLCGHFIGIDKLERLKLLQNDPLVNEFDISVKEPETVSRFLGNFNFKTTQMFRDINFKVFKKLLTKSKLTSITIDIDSSVINVEGHQEGASKGYNPKKLGNRCYNIQFAFCDELKAYVTGFVRSGNTYTANGAAEMIKEIVANIKSDDLEILFRMDSGYFDEKIIETIESLGCKYLIKAKSYSTLTSQATNSSIVFVKGEEGRETTELYTKLVKWEKDRRFVVSRVLKPEKERAQLSLLEGSEYDYFFFVTNTTLLSEKVVIYYEKRGNAENYIKEAKYDMAVGHLLLKSFWANEAVFQMMMLSYNLFLLFKFDSLDSSEYRQQIKTFRLKYVFLAAKIIKTARYVIMKLSENYPYKGVYEKCLV
17025..17900                       PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; FH42_25820; phage(gi100066)       1.60e-170           MVKKSLRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILYRADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGGYGTTNDIAVIWPKDRAPLILVTYFTQPQPKAESRRDVLASAAKIVTDGL

#### region 2 ####
79418..79431                       attL                                                                                 N/A                 GCATCAGCATCCGT
complement(86391..87242)           PROPHAGE_Escher_MG1655: IS150 transposase B; FH42_26230; phage(gi16131429)           0.0                 MKVLNELRQFYPLDELLKAAEIPRSTFYYHLKALSKPDKYADVKKRIGEIYHENKGRYGYRRVTLSLHRDGERINHKAVQRLMGTLSLKAAIKVKRYSSYRGEVGQTAPNVLQRDFKATRPNEKWVTDVTEFAVNGRKLYLSPVIDLFNNEVISYSLSERPVMNMVENMLDQAFKKLKPHEHPILHSDQGWQYRMRRYQNILKEQGITQSMSRKGNCLDNAVVECFFGTLKSECFYLDEFSNISELKDAVTEYIDYYNSRRISLKLKGLSPIEYRTQTYVPRV
complement(87239..87760)           PROPHAGE_Escher_MG1655: IS150 transposase A; FH42_26235; phage(gi16131428)           1.23e-116           MSKPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVALYEKHGEKGLIPKPKGVSADPELRIKVVKAVTEQQMSLNQAAAHFMLAGSGSVAKWLKVYEEHGEAGLRALKIGTKRNITMSVDPEKAALALELSKDRRIEDLERQVRFLEMRLTYLKKLKALAHPAKK
complement(87964..88338)           hypothetical protein; FH42_26240                                                     N/A                 MRYWLLVILMNVLFYFIVKHVAPEWYDSPGYYAGQIICTLIAAVITWRDPPDWLDGILLGVIKFGVLIAGIIFFVWGIGYKLAFWGQHDPNTIYASANDVILPNLALGTGVLIAAWVYIRYLKR
complement(88394..88720)           PHAGE_Rhodob_RcapNL_NC_020489: hypothetical protein; FH42_26245; phage(gi461475014)     4.51e-17            MKWRYSLRWKLPHRPCPGPRELISVVVEAGQAAPEEVMSRWVAGSGYAVCVDFLGQKQIQRWSDERKAAVRRRNMQARIHRVAPLFADELIERELAARPEYFNGKSAR
complement(88717..89445)           recombinase; FH42_26250                                                              N/A                 MIPSSSALVSLKPARQAALQAIMTVEEARQRGARLPSMPHVRTFLRLLTGCSRINSDVARRIPGLHRDPKDRLSSLKQVEEALDMLISSHGEYCPLPLTMDVQAELFPEVLHTRTVRRLKRQDFAFTRKMRREARQVEQSWLLRQNLLGQAVTELNFQSPETVCTWYTRWSDEFDAAELAAPFWRWQSRFASLKELDWLRISGEPLYAVMYEIPFIVRETPEHIRVAERWQVPNKLADRSGV
complement(89442..89873)           plasmid SOS inhibition protein B; FH42_26255                                         N/A                 MKTLLTLDVLKTMSSDELEDYRAAGEDFRRELSHAVMRDLTSPSGWSVNAEYRCEFGGFFPVQIRFTPPHGHFDVAVCSPGELNPRWIVVFVTRDGQPFSVVRVMDAFNPELITHTLDLIECLDAGGYSFASIISTLSQEGAQ
complement(89918..91975)           PHAGE_Gordon_Hedwig_NC_031099: RNA polymerase binding protein; FH42_26260; phage(gi100054)     5.84e-06            MSATESKVKTAPKTSKKSVKPAEAAALKAALDAAPIEYVPVTALVKSPLNVRTIPYPVEKVRSMADSIEALGLLQNLVVHNLPDGRCGVAAGGRRLKALQLLQSENRIDAGYQVMVKKVPDELAVAASMAENEQQMAMHPSEQIAGFRTLAVQGKTPAQIGDLLGFGTRHVQRMLKLTELAPEILAALAKDEITTEHCQALALESDQKRQVEVLESARKRSWNNEVSVSSIRNLITSEEVSTNGDKFRFVGEAAFSPDEIRVDLFSSENGGYVKSASLDTALLEKLQNIAEHLREAEGWSWCDGRLDPISHYGKDTKIWRLHAAPPVEYTEAESERLAELEALEAKYEDENPGVNDDVVAGALEAVWEEQQTIAHRAKHRAWTDEMKQSAGVVVSWTGQEVKVQRGVVLCADEKMKEKDASTNQAPEKVDPLDAVSVPLLTRLSSERTLAVQAALLQQPQKAVALMVWKMCNSVFHTTTSVKEPFCISVSVSHYALTREAPDGENSVAFQAIQSEKERLEALLPENWQKDMTTFFTLDGATLMALMAFCTACSIDGVQGKDEFSRKHQSSLDGVENAIQFDLRDWWKPTADNLFSHMKLPHIVQALSQAGLTGAAQDAAKMKKKDAAEHAEHFLSKIRWVPEWMTSADNQKQLAAKSELSLATSQNDTDADAGDVTDHNNPACAA
complement(92045..92293)           transcriptional regulator; FH42_26265                                                N/A                 MDHNVLSPLVSLPDGTFTREQAQVVAAQYQNVAIEDDQGTHFRLVVRHQDDGSMIWQVWNFEPGGEDMMNRYIRDYGVRKTK
complement(92342..92884)           PHAGE_Entero_P1_NC_005856: Ssb; FH42_26270; phage(gi46401640)                        3.15e-63            MAARGVNKVILVGHLGQDPEVRYMPNGGAVVNLTLATSETWRDKQTGEMRENTEWHRVVMFGKLAEVAGEYLRKGAQVYIEGQLRTRNWQDDAGVTRYVTEVLVGQNGTLQMLGGRRESGVPESAAQPQNPATPAQPAQAAAKSPKAKGGKKGRQDAAPSQQPPQPLPDDFPPMDDDAPF
complement(93680..93997)           membrane protein; FH42_26275                                                         N/A                 MRMSLMFAAVTLLTGINLFFIPFQPVPALWGAILAVAFVLINVVADKLRLWSGIAWIIVAGIIITLMLKGKEPGDEFRVLITVFAFLASIWYSVAQFRKENKLRS
complement(94032..94286)           PHAGE_Entero_P1_NC_005856: Hot; FH42_26280; phage(gi46401721)                        2.09e-22            MSKWNIASFSKEEQDKVAVDKVAAAVAWQERMNKPVVPELVEREQPELLREYFHERLRVHRLNSQQLPRANAPEYNKPGDEQQK
complement(94474..94665)           AreA; FH42_26285                                                                     N/A                 MKLAPQSRDILRQYKALINARRRDAGQRELTTAQVMDEICEYMTCQCAVYIGGHFILQGGKAR
complement(94708..95214)           PHAGE_Rhodoc_CosmicSans_NC_028677: ArdA; FH42_26290; phage(gi966199624)              1.84e-12            MTSSVTVPAVYVGTYHQYNGGSIFGKWFDLTDFDDEDEFYDACRALHAAEDDPEFMFQDWEGIPSQFASESSVKWAFIEAFRQAQDEGRAAAFVAWADYTGECDYDAFDEAYCGEAESEEDFAYGFVEDHGLLNEVPESLRVYFDYEAYARDLFSSGYVFHEGYVFSN
complement(95257..95685)           PHAGE_Pseudo_YuA_NC_010116: hypothetical protein; FH42_26295; phage(gi162135127)     1.06e-13            MQYVNTCPVLNVEESDRLSFMPYLFGTDFMLAELQVYALAKKWMPEYEGGFWHFIRLPEGGGYMMPDCGRVHLVSSENWFDRTVSADAAGIILTSLAINRRLAAHHDSSNPALTRLYMLRDAQLWNHITFHPECSAIYAALD
complement(96318..97085)           membrane protein; FH42_26300                                                         N/A                 MMKKETLNTLILRHGDRMLRQAGWPDTVDMAPVAPETVPGWLAACGSLSGVEILTLTEQLCQPLTYGRAALLLASARRLAGTPARLHLFPVQAYPHPERLADCQVIRLPYAQEWLTAAECDDLLAFLKASLTQISEIVHRDTKRIAAALTPSVIPRLMDRRIGDWRLLAVEYDHDNCLDEDETDRLDQVLDAILIRDARFCPVLLTLVNEREETIRSAGVIADQLRFTDTPVRRWFDRRVLREMVREARASRTQE
complement(97139..97558)           hypothetical protein; FH42_26305                                                     N/A                 MYGTREDLCRMLNEQYPAETPLNLIIWTPADIEALADGMEYSFSEHDVRAVLERMDTIPEEQRLESGVSAGLVMALIDQVKENGQRVTVPVDLLETLLITAEQALWDREWTARDRNLPVPESVMRRLADTAKVRALLKS
complement(97568..97789)           PHAGE_Entero_N15_NC_001901: gp50; FH42_26310; phage(gi9630517)                       6.40e-06            MNYDGHEALRRDMAGLANNLCDLKTTLKVLEDTYHYRYDGLAERLAGISLRRLSVLMDEAFNIALMLDESFLD
complement(97789..98490)           PHAGE_Staphy_Stau2_NC_030933: hypothetical protein; FH42_26315; phage(gi100063)      3.58e-27            MSRFILGNCIDVMRGFPDRAVDLIVTDPPYLVGFKDRQGRQIAGDVTDEWLQPATLEMYRVLKKDALMVSFYGWNRVDRFMAAWKAAGFYAVGQLVFTKNYASNRRNARARRGFVDYCHEGAYVLAKGRPVPPLKPLPDVLPFPYTGNTLHPTQKPVEALQPLIESFSAPGAIVLDPFAGSGSTCVAAYRAGRRYIGIEMLAQYHRAGTERLAAMHRAVNTPAANDEWLPEAA
complement(98927..99157)           hypothetical protein; FH42_26320                                                     N/A                 MSPGFRNVLRLARIPVDSSEPVRRKFGSRLIGIVTVCLLPLLVFDVPQWVFILSQVIWGAGVYIGLSLAGDKSLNR
complement(99218..99889)           Mediator of plasmid stability; FH42_26325                                            N/A                 MPDGQYSFYLHSDDRTDIAAMATISTISQPLRGEFIRTAATAGAVVYQVDARLPALIPVFFAGQLSAVRLCAVMALVSGTWSSLTGLPDEPENGGAALPVSPETEYQRRRYTLTLQNGRSGERVESVLTEASSRLRGDLLRNLIITGLALHTTAPELPRLLASMPVPPTSVSELQALVQQMAGTADVNRAAAAVPDTPTASAAPVSGSDTREIKKNMRRAFGD
complement(99892..100866)          PHAGE_Entero_P88_NC_026014: recombinase; FH42_26330; phage(gi744692717)              6.40e-77            MMNIYCDDGSTNVKLAWFEGDELQTRVSANSFRHGWKVAEFSAATFNYQVGTLKYTWDSVSRDAIPTTNVEYQYGDLNLLAVHHALLNSGLEPQPVSLTVTLPLSEYYDGDCQRNEENIRRKRENLMRELVLNKGRAFTVTDVKVMPESLPAAFSRLAELKPGPAETTLIIDLGGTTLDAGVIVGQFDDISAVHGNPSVGVSQVTRAAAGALRAADSETSALIADTVIRNRNDRQYLQRVINDAGKIDEVRNKITEAITSLGARVTSELTAFRNVNRVFLVGGGASLIEEAIRQAWPLAHDRIEVIGDPQMALAREIALYNKED
101095..101526                     PHAGE_Entero_P1_NC_005856: HumD; FH42_26335; phage(gi46401723)                       5.87e-23            MKLQLFSTGKELPPQAHPLFADLASCGFPSPAADYVESDLDLHDYCIRHPSATYYLRASGDSMSDGSLYNGDLLVVDCAEKPRHGDIVVASVQGEFTVKRLLLTPRLTLQPMNAAWSPIYPDPDDLDIFGVVTHIIHRPREMY
101526..102797                     PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; FH42_26340; phage(gi431811050)      0.0                 MFALADVNSFYASCERVFRPDLKGKPVVVLSNNDGCVIARSAEAKPWIKMGTPWFQMKNERYPEKIYAFSSNYELYASMSARVMSCLEELAPGVEQYSIDEMFLDLTGVEHCMDLEDFGRQLRQHVYDCTRLTIGVGAGPTKTLAKSAQWASKEWKQFRGVLALTRGNPQRTRKLLSLQPVEEIWGVGNRIARKLNVLGIKTALDLALTNPAFIRKNFSVVLERTVRELNGESCMSLEEAPPTKQQIVCSRSFGEKITEYDSLRQAVCQYAERASEKLRKERQYCRHISVFIKTSPFAVKEPYYGNVATEKLLTPTQDTRDIIAAATTALERIWKDGHRYAKAGVMLNDFTGSGVSQLQLFDERPPRPHSAELMKVLDGINHSGLGQLWFAGRGIAPSWQMKRDMLSPAYTTRWKDIPIARIS
103198..104094                     PHAGE_Entero_P1_NC_005856: RepA; FH42_26345; phage(gi46401683)                       9.11e-91            MYKKSVDLSLESVLVEIDENKKLMPSRNATVQPVALMRLGLFLPSLKRKGKDTENISIDASSELQSLELARAEGYTDIRITGPRLSMETDFKVWVGIILAFSKYGLNSSTIELPFSEFATFCGFSSKDKDKGLRTRLADSLIRLRSTTIKLASEKDRNGVVSGLLSRGKWDEKDDIMELTADESLWELYQFDRQVLLQMFIIRQLANKGTAQALYTFIESLPERPIPLSFARIKRRLMLTSPNNQQNRVINKAIDELKAVGYLDGDVVKKDGEWHLIITRRTPRPDIKAMSEALKDGE
104170..104183                     attR                                                                                 N/A                 GCATCAGCATCCGT
104416..105621                     PHAGE_Entero_P1_NC_005856: ParA; FH42_26350; phage(gi46401682)                       7.35e-172           MKRDYGGVGSIARRAGILLESMSRDIEDQRKEFNLTEYFQTFTRNAVAKLPKLSRRIVEQAIKEMEDAGYDFNKKRVGNVEQYALTVQNVIDIYAHRKIPKYREIHQSPYVIFVVNLKGGVSKTVSTVTLAHALRVHQDLLRHDLRILVIDLDPQASSTMFLDHTHSIGSILETAAQAMLNDVDAETLRNEVIRPTIIPGVDVIPASIDDGFVASAWKELVSEHLPGVNQYEVLRKIIIDRVADDYDFILIDTGPHLDPFLLNGLAASDLILTPTPPAQVDFHSTLKYLTRLPEMLETLEEEGIEPRLAASIGFMSKMTGKPDHLVSHSLAREVYTSSILDSSLPRLDGFERCGETFDTIISANPASYPGSNDALKKARTEAEHFTKAVFDRIEFLRSQSA
105618..106592                     PHAGE_Entero_P1_NC_005856: ParB; FH42_26355; phage(gi46401681)                       1.43e-64            MKKKIVARGRNILGSDSSDFIRSLETKEAEKVFTLKSGNQAKFTLSTILNGDIEEKTFVDPAVNGRDQRYVTPESVSDITRTINLQQFFPAIGRVINGCIEVLDGSRRRAACIFSGAKFEILVTEDEISLEDARQLAKDIQTAREHTLREIGQRYQFMYANGMSKDEIARVEDVSPASVSRAFQAASVPAEMVELFPVINELSLADYQLLLKISEDLDSKGVPLSDLLGKVQADISAAKVESVSKSLIMDSFKRHSKQLKPAPVKTVQTEKLREFEDKKQFARKKTDPSKRLVTYEFARLPASVQAELDKAIRLVMGNMQSFEK
