gi|00000000|ref|CP009209.1|  Burkholderia pseudomallei strain BDP chromosome 1, complete 4056147, gc%: 67.82%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(384313..384774)         DNA binding, excisionase family domain protein; JE55_334                             N/A                 MNTTVTPAALPSEHEAELARESRRNLVTVVNSHAETQQFDFKDEKGETHTVTLPTSALRLLDEILHQIGNGNAVSIIPIHAELTTQQAADLLNVSRPYLVQLLEQGEIPFRKVNTHRRVMYLDLIQYKNKIDANRLDALAELTAQAQELGMGY
385822..386049                     putative aTP synthase F0, B' subunit; JE55_335                                       N/A                 MSQDIVALQLEAKKQLAQKTDLTSKQQLEAKKQLAQKADLVSRQQLEAKKQLGQKADLLSRQQLEAKKQLAQRSD
386509..386889                     hypothetical protein; JE55_336                                                       N/A                 MKRTVTVLLLVAASAAFAAPQRAQWTEIGHGAGGSLAYETTTLKHQGSRVLVWVRLTYIPDQHDATGTYDGQLYHVSIDCANDMIGFRGVSNTLRGVTVSSSDLQTDGDQIEPDSVFYYVEQAVCK
387287..387712                     PHAGE_Burkho_phi6442_NC_009235: gp28; JE55_337; phage(gi134288620)                   1.38e-18            MVKRAIICVGDTTTHGGKVLEGAPTFTLNGRNVAGVGHKVLCPRCKGIFPILPDLLGRRYPHTIGERDTAVEGMRTACGAELIASQGTGTIDDVGAGERGDGGSPSGSAAAAAAAVAPSPTLCLECLKAAAKNAATMVARG
387709..388215                     PHAGE_Ralsto_RSA1_NC_009382: hypothetical protein; JE55_338; phage(gi145708076)      9.93e-23            MMTPPNIEAHFEMRRQQITLPARLFAMVDALLFAEASDAPPLRRSNYSIALFDRTPDASLAEHGPWLIDYALTPGPIRRVLAELAAGPIGMSWLISAYSFERLAAELREHLDVRLPDGRTALFRFYDARIMPDIARVMSDAQRSHFFVATYDWLVEIDGRLTGVHPHA
388208..388681                     hypothetical protein; JE55_339                                                       N/A                 MLELSAEQVAGLAQIDERGFVERVRQDLVKENPAFADDGGLSSRLWTAYRAARALGIERDENVVAFLRLEAYAPGFYEKPATKAWLMRPGRSADARFHDYLRVIKWRIEHPDGGLEHGGIGISGNRSGGGGAWADLGARWRRLVGRGNGGGNGESVG
388818..389168                     PHAGE_Ralsto_RSA1_NC_009382: hypothetical protein; JE55_340; phage(gi145708077)      9.41e-09            MYQGRVTGRPYSVDERWSEEWKWFGTDFDGFVPAECLLQEAKSRYAKFLRRNVEGELQPRKWFEGFADMQDNLIRQATIVNANPPARLKWYFEEADAREYMLPALIRNKVQSVVQP
389180..389890                     PHAGE_Ralsto_RSA1_NC_009382: hypothetical protein; JE55_341; phage(gi145708078)      2.60e-49            MDISLQFKDASLTPTSFEEILSRIHVVTSALTALNPKFNTWFAQGSSRDEALLYPVFEEGHPTTAILAVLKQKFSKNPPTSYVALWDGDENEDQGATIACHVSSAGLPNTFELSLFDAPILRDLNAVEKIVRATITAFGPAYVCVAPRSYVTKQVFDDKPGVGWMLYLPRVITQQQVPEARALIPVTTDGKKQQGTIIVSTTDAPFSMKVPEHVEVANRIEIRLVDQDLLPAFSDI
complement(389931..390719)         PHAGE_Burkho_phiE125_NC_003309: DNA adenine methylase; JE55_342; phage(gi17975188)     0.0                 MANPIIPWIGGKRRLADHIIPRFPKHDCYVEVFAGGAALYFMRPPARVEVINDINGELVNLYRVVQHHLEEFVRQFKWALTSRQVFEWLKHTVPETLTDIQRAARFYYLQKSCFGGKLEGQTFGTRTEHPPGLNLLRIEEELSAAHIRLANAYIERLDWATCIDRYDRPYTLFYLDPPYFETEGYGVAFPFTEYEKMAERLRSIKGRAIVSLNDHPEIRRVFAGFHIESVPIQYTIGGGKGVERRELIIFSWDDAAQPAGLF
complement(390863..391408)         PHAGE_Burkho_phiE125_NC_003309: hypothetical protein; JE55_343; phage(gi17975187)     2.16e-116           MPKAAPYLLAALLGMAAGAGVEHLIGAHRLADEQAARALDAQRHAEALGTISRAALDAEQRAIAAHDAAASAVAAVDQRTTKERNEHEAESRSLRAALAAGTERLRVAVRHCTAAGGDGVPGASSATGVGDGAAAYADVDAAVAERVFGVAGDDQREIDKLTALQGYVCAVRPMTPGCEQK
complement(391408..391905)         PHAGE_Burkho_phi6442_NC_009235: gp25, phage lysozyme; JE55_344; phage(gi134288680)     4.19e-84            MAKLPKKTLAGVVGAIAAGVLTVIVPKFEGVKLAGYLDPVGIPTKCMGDTRDVIVGRTYSEAECRQSLETQLIAHAEPVLRCTPGLKDRPYQLAAAVSFAYNVGANAYCASTTARRFNAGDLRGACRAINEADDGRPQWVTARGRVLPGLVKRRAEERAICERGL
complement(391898..392092)         hypothetical protein; JE55_345                                                       N/A                 MKSEIAASAAKSAPPVASSLWLWASGHDANWWASLLVSILTGGYICLQCYYLIKNKGRRGGKHG
complement(392168..393220)         PHAGE_Entero_PsP3_NC_005340: tail protein; JE55_346; phage(gi41057378)               1.86e-49            MQAIFQIIANGADITRTIQDRVLRIRTTDKPGLEADECEIELDDRDGVIRFPPKGATLKISLGWAGQGLSLLGEYAIDEIVLRGPLATVAIRGRPANLRATSKTHRYGSWSNAKLADVVGDIARRNKWAAACSIDVVVPRADQFGESDLHFVTRIARQYGATATVKAGKLIVTPIGGGKSASGKVLPALLLTPEQLIDYEISFPDRASFAAVRTKVHDAKSGKKIDLVIPNPDAPPGAAAVHTERHAFASPQAAKAAASARLAKLNRHTATSRLRMLGRADVSAEKTVTLKGFKRDADGDFLVESVTHEYAGRSWETEVVLNAGNKGKAKAGHGKKQAKKINLVIPAPQR
complement(393230..393436)         PHAGE_Entero_P88_NC_026014: tail component protein; JE55_347; phage(gi744692729)     7.93e-10            MARTLRTSDGDVLDTLCYAAYGTLSGTVEAVYEANPGLAREPQPFRAGVLITLPDLDAPRDEPIQLWS
complement(393411..394292)         PHAGE_Escher_vB_EcoM_ep3_NC_025430: tail protein; JE55_348; phage(gi712913218)       1.79e-23            MDFVKSITQAATQASIAAERVQHVSRVYERNRAASQNTVDTLTKLATGNLTSAAELLNGASSALSVATDLSPKVGEVTRGFRATAGAVGSVLRIANASNHPQIHAAAQTVTTALKGVETQFAAVVGTDTAKAVKSVLQATGLGAVFDALGGDASSATPHLLTLTTEEGRGFNFGLSTAAFDKLRRTTRYKVASQERLNRPEALQAVSQGGETIVLSGVVFAALGAGARQLEALRAIGGRMKPVQLTAGTGDVLGRWYLQSVEEEQEALMSDGAPRKQTFSLEFGRYGEDFKNI
complement(394301..396715)         PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail length tape measure protein; JE55_349; phage(gi971741542)     1.79e-14            MAREIALGIVIGGAVSATFGKAISDTQSKIVGLRKTAAEKGMWQRQIGETIKLQDEFRRLRRAGDSAAETIRRKLDSNLRTLRDAGIEVDRLDRAYARLGRTARGLELRAMGHERLSGGREAMRGAIGDSMKLTAAIAVPTMVSAQYQAIIRDIAIKAGIARTGEERAMSDRIRRDALANGMNRNELAEAVNQMVAAGMDVDRALGFAPAVAKFAIGQGATSVETAKMIQALEQNADIKDPAAMLKALEAIAYLGKEGSFESVDMARWFPVLLAEMKKIGITGQDSVTQLGAMLQVQMKTAGNADEAANNLKNWFSKIGSGETERNYKKAGVDYEAKMKEAIGKGWSTLEASFVLARAYIERVDSAKAKQLAETAKSINAELDPAKRQKQIRAFEETMKTGDLFNDMQVKAALTAYLQNADLYSNLKRNAASASGEIEKDLKDRRDASKQIWKEVADQWDEAMRSIGDALRPVTDLAGEQAKKAGGKVRDIVDASPRAAAAVIGVAGAAIAYRGARAAWSIGRGVLDVARGGWLARGGERSGKGGKGAKPGRGAQALDALGAAASGVQRVFVVNMPGGGIGGGSVGDLIEGAAGVASGRVGKAGRFGRLGRALGGIAGRVLPYAGKIALAGTVLKLGLAAKDAYAVAAGDDPRARKAENFAGIGGSLAGGVVGAKLGASIGAFGGPLGAAIGGVAGGAIGTFAGQKLLGALTRWAFQQRGDTPEAARAVANAKALVEPGVAERRAFKVEQQNSFAPVFNIKLEGGSDQEMADRLLARINPQIQRAMTQSMNNNNRSALFDAPHL
complement(396803..397105)         PHAGE_Escher_vB_EcoM_ep3_NC_025430: hypothetical protein; JE55_350; phage(gi712913216)     1.93e-07            MDTITIKLEYPITLDGVLRDTLTMRRPKVRDVRGASKRAQDDDELREITLFAMLADVAPDELEQMDMADYVAMQRAYDSFRTSGPIARKDRQGDGEAPAA
complement(397175..397678)         PHAGE_Escher_vB_EcoM_ep3_NC_025430: tail protein; JE55_351; phage(gi712913215)       2.29e-50            MIPETLFNLAMYVDGRGFVGRTTEVTPPKLKIKTDDFRAGGMDAAVKTDQGMEALEASFAMSTLERDVLKFFGVADGTAFNAAFRGSFRDIKGGSKAVAVHMRGMLTEVDSGSWKPGEKAEIKYAASLNYYKLEIAGAVMHEIDVFGFVRVIDGVDQLAQVRRDLGM
complement(397689..398858)         PHAGE_Escher_vB_EcoM_ep3_NC_025430: tail protein; JE55_352; phage(gi712913214)       2.30e-79            MGATSFYHGVTTTIVDVGPRTIAVPSSSVVGLVDTYAPGADLVQPNVPVRLTNEHDAAQAFGEHSAVARAARAIFAQSKAAIVAVGVEKKGDAAQLASDVIGGVSAAGKRTGLQALLDGKSLFNLQPRLLIAPGHTSKQAVATAADALANKLRAIAILDGPNTDDEAAIAYAKNFGSKRLYLVDPGVRYWDTGANVDADAPASAYAAGMFCQTDAAIGFWASPSNKEIVGITGTSRPIEFLDGDETCRANLLNNAFVTTIIRDGGFRLWGNRTLSADPKWTFVTRVRTLDIVMDAVQAGHKWAVDRGITATYVKDVTEGLRAFMRDLRTQGAVINFEVYADARLNSASQLEQGKVYWNIRFTDVPPAENPIFRFEITNQWLTEVLDTQQ
complement(398924..399376)         PHAGE_Erwini_phiEa2809_NC_027340: tail fiber assembly protein; JE55_353; phage(gi849120318)     7.53e-17            MAQKFAAHDSKNFITAFYDSVDSPAPAGVTCTEITDEQWKMLLDGESRGKRMALDDNGMPVLLDPPPPTIEQIIVSNTAMRDRLLERASVALTPLQTAIMLGDATDSEAQQARAWIAYTRAVKGIDLTRREPTWPEQPEMARERSSSTRP
complement(399392..400855)         PROPHAGE_Salmon_Ty2: variable tail fiber protein; JE55_354; phage(gi29143754)        2.74e-14            MANLKEQAQWEDGVYQLETSDPVIGGPDGIDNLQAKQLANRTKYLKQQQESHASAVDPHPQYATKTDLSQRLADLVGQSPSTLDTLNELAKALGNDPNFATTMTNALSQKAPLDSPTFTGAPKGTTPAPLDSSTRMATTEFVRRALGNVNFASYISSQKLTASQAGSCINFWGGAAATFALPAVSTMPLGGTFLFNNSSDAPLTIVRDGNDSILLNGGNPSATLTLGDSLLLVAVPPGQWIAAGGSAQLPFSSVMAGPNWSTASQFDNSARLATTAFVQRALGSFSGAVDAEGAITLKAGQAGMVVYSTKSPTVTLPLVSTVPEGAAFFIAAAGTIVTQGSDVIYNASGSAVGASYVTGPTPTSPAPALVVRNGGVWQILMGSSALKGDNLFAATLAIPGFSKFPNGLILQWGSFMSSGTGNPNATVTFPIAFPNACLGLSPTIGGGSIGNFTVQTYAAFRTGATLSCQNNAGMSGGVGGNYFAIGF
complement(400843..401418)         PHAGE_Burkho_phiE255_NC_009237: gp25, tail fiber; JE55_355; phage(gi134288819)       8.97e-40            MSERLLPSNQTPLEAALARVLRPSVDPEILRTLMDVDRCPAAFLPWLAWSVAVDGWELAESDDARRALIKGSLALHRRKGTPWAVREIVRRLGFGEIEIQEGRIAKRRDGTARRDGNYVHGRASAWAEYIVTLKQPITRGQGQALMRAIERYAPARSQLVKLDYSAIAIRHNGTAVRNGQYSRGVVAAWQT
complement(401411..402304)         PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995: putative phage tail protein; JE55_356; phage(gi937533298)     4.74e-61            MTMIDLSLLDPPDLVETLDFEAAYQMKLAYFKRIYPDWSAALESDPAVKLIELAAYDEIRLRARLNDAARATMLAYATGADLEHVAALMGVEKALVDPGDPDATPPRSPIYERDERFRLRTQLAIETSTDAGPIDAYRKHALDVSPEVLDVQVDRPEPGTVRVTVMSQSNGGIANDALLAKVRAALPAEDVRPLNDTVLVVPARPVAYAIEADVYVGRGPDPAVVLAERRRDLDAAIDAARRLKLGMARSAIAGALHPRGSSVARVDLKAPLGDVTCNGQEFADCTSVVLNLKVLDE
complement(402301..402645)         PHAGE_Escher_vB_EcoM_ep3_NC_025430: tail protein; JE55_357; phage(gi712913207)       2.71e-20            MSDIDEMVGMDRWTGAPLRGLAHLKQSIGDILGTRRGTRRERPEYGSDIPAMVDLPITRGWISSAQAEAARAIGRWEPRIRLDRVAALAVVDGRVTFEIRGHVDGKAEIFEVTV
complement(402642..402848)         hypothetical protein; JE55_358                                                       N/A                 MAKEPSHTSAPLVQPRATFVDTRFRTRVIVFPDGSVLRVIKGEVLASVASHIEYLDAHPDFKRLEGRA
complement(402913..403593)         PHAGE_Burkho_phi52237_NC_007145: phage baseplate assembly protein; JE55_359; phage(gi72537705)     4.40e-36            MLEYEIGEIDRRLACLVQQGTVDAVSYDPPRCRVRVGDWVSDWLPWFTVAAGAVRFWRPPSEGEQASILSASGELSSAYAVPGYYAEQHGGAARRSPNETAFDFPDGASQVYDHASHEYRVDVPAGGRIVFRIGETELELRADGVTLRTEKLLGDVPDSTFTGNTTTGQRLTFNGGMQGRAGANGGPAVEVDGGARYTGDVEIGGKSFLGHSHREQGDGAPVSPPL
complement(403596..404129)         PHAGE_Escher_vB_EcoM_ep3_NC_025430: hypothetical protein; JE55_360; phage(gi712913205)     2.59e-12            MLDNLKLLHDAIVKGLREALPTFERIEAYPKIGAQIRTPLIAVELSEMEPGHDDGTGCISLIARMQARIIVDPYGAEHELHVREIAARLALAVHMQTWGLPIVPGRVVQVGEDPFRPQLDTYLVWLVEWTHEFGIGGEPEAIPDGSTLVWGVDPSTGPGNESSYWDPAQDAPADYPE
complement(404119..404649)         PHAGE_Vibrio_VP58.5_NC_027981: gp09 protein; JE55_361; phage(gi937456080)            3.24e-24            MNRLKVEIDVGAVTAVLQGLSPSAMQAAWRRTLRKTAAWIKSQTAKEVSAATRIPQKTIRRRLYFFLRSADTGKVWLGLNPIEAHRLGSVAKTRKGMRAGRTSFEGAWRQSKRQPDGPIFERVGKARLPYRVVTVNWHETGEPAFRRAAKACEERLLTILRQEVNYELQKVMGRAR
complement(404651..404941)         hypothetical protein; JE55_362                                                       N/A                 MAFHDLMTDVDAAVLRDLGDDDVFVDGRPVRGMFNAPWLGPDLGSQRTNLVAPMLHVIDADAAGIQPGSVVTARSGRYRVVEAQPDGTGWTILTLQ
complement(404945..405940)         PHAGE_Vibrio_vB_VpaM_MAR_NC_019722: hypothetical protein; JE55_363; phage(gi428782731)     7.61e-39            MADIAIFNDDAFSLSSMTAAINEQPHVPGRLGEAGLFDEEGITTTTVQIERDGDTLALVQSGVRGQPAPNVLGSKPSLIPFNTVHLPQRAVIKADEIQNLRAFGDDSELETVQRYVDKRLAKMRRQLEATHEYHRLGAVRGVILDADGKHVVANLLDRFGIEQQVIEYELSNAKTEIRIKNEDTLEAIEDALGNVPFSSVRAFCGRNFWRKLLTLPTVKETFLNTAAAAALRGDPRGAIELDGIVFERYRGKIGGIPFVGDDEAYAVPESVPDLFISRFAPGDYVDAVNTIGLPYYARQEIMPFNKGVEIEAQSNPIHLCTRPRACIRLKA
complement(406005..406349)         PHAGE_Aurant_AmM_1_NC_027334: head decoration protein D; JE55_364; phage(gi849119857)     4.05e-08            MSNIQTMGALPAEFLISEGPGQISRDAILVAAGPALPAGCVLGTIGTGEYAPYDNAATTGAEVAVGILYAPLPASDKPRPAVAIKRLAEVDARLLAGLDAPARDDLAAHHIVIR
complement(406376..407455)         PROPHAGE_Escher_Sakai: putative protease/scaffold protein; JE55_365; phage(gi15832214)     2.72e-49            MKRNRKWWDIRAQAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAADASSITVAINSMGGDVFDAFAIYNALRRYAGKVKGRVDGIAASAASLVLMACDEIEMPENALLMIHHPHTVAAGESKDLRRVAELLDNASAGILAAYAQRSGLSEDDVRAMMDAETWLTAAQAKEKGFCDVIEAPVKLAASAGTAPLLARFSAVPEQVRALLDAAGESDAEPPTDPTPDPEPEPPSQTPDVTALAAHVFNSLREANLAACAEGVIAATGLRDCETVDRAIRNATDIAGICLAANQTDLTAQYVADGLTPDQVRARLFERLTASSARINSRPDPAQQQTQPQARGRTLRTSDIYAARRVAK
complement(407452..408945)         PHAGE_Vibrio_vB_VpaM_MAR_NC_019722: portal protein; JE55_366; phage(gi428782728)     6.53e-91            MSRAYPMLARRGFVVPTRLKAAAYESASTGGARARSWKASSAGPNAAAAQNLPLMRHRARDAIRNDPWAKAAITRLVSNTIGSGIQAHPRHPDEAMRNAQKQLWEDSTEEIDADGLFDMAGLQTLAARAFFSDGEVLVRRRLRSWHDGLAVPLQVQLLEADHLPVSKSERLPRGEIVNGVEFDDDGRRIAYHLLTRHPGEYGRQAGDSTRTVRVPADEIAHVFLALRPGQVRGVPELSTVLLRLHSLDNFDDAVLFRQEVSNLFAGFITKPHAELGPMGDPVSGAPMRYDDDGFSPVVSLEPGGMQELAPGEEVRFSEPPGAGNDYVPFMRQQLMASAASVGMPYEVLTGDLRDVSDRVLRVILNEFRRSVEQIQWNVFIHQFCRKVWRWWVDACALSGAMPMPNYFRRRRDYLRVRWVPQGWPYIHPVQDVTAKRMEIRAGLASRTGAVLARGDDPEQVDAENAADLAREQRLGLRYDTQLAIEDGNGSVLKEDGE
complement(408942..409148)         PHAGE_Stenot_S1_NC_011589: putative peptidase b; JE55_367; phage(gi213163904)        3.65e-05            MAYTRQDLDRIQSAIAKGELEVQYADRRVKYRSILELREAQTEIIRALDGASGRSRIVRLRHAGKGVR
complement(409159..411144)         PHAGE_Escher_vB_EcoM_ep3_NC_025430: large terminase subunit; JE55_368; phage(gi712913196)     2.40e-76            MSAKATASPGRYNPNITPWVFGMHAALDDPTVQKVVCMKSAQVAWTDGVLLNYIGRRIDVDPCPMIVMFAKEKSAKKFNMEKFEPMVEVTPRLSAKLPVHASRDKNNLWDHKTFPRGFLKFITSNAPDDVKSTPAPVVAVEEPDDANQNVREQGDSITLLEERNKSYSDSRRKVIFGGTPTVDGFSRIQQAYEASDQRVYLVPCPDCGEEHELVWENVTWTDDAEIAHEVYGRARPESARYTCPHCGSLWDDSMRIRAVRRGRWVATAPFHGVAGFRLNELVSPFPGSRMAELVKKWLTAEKALRAGDDTKMRSFVNNSKGRPYKYKTDLPEIDALAERALPYPAFVVPAGGLLLTLGVDVQHDRLAIVLRAWGRGEESWLVVWDEIFGNVMDQREDPLTGGVWGALTTLITHAYRHETGGLLRVRATSIDSSDGSTSDAVYKYVRAAQRRGLNVLAIKGSTDANAEIFSTPRASVDSTRNNSKAAKYGLRPYMVGVSKAKDLILDNRLKLEGDGPGRMHWYRDVRFDYLSQLTAEVKVPARIGTKRVWQKKAGARNEALDCEAYALHAARSVKTHLMTELHWQVEQQRLSQVSLFEAVPVLDALPSALPVEVLPDPPDDHGTDTAPPPQQAAQPIETPPPSGVSRIQGRRVGRSAYLTRR
411275..411754                     hypothetical protein; JE55_369                                                       N/A                 MLVQPFEVNFNVIQRAQFLNQLVGEREQFRLKGTDHLAICLLKLRCVDQMPFLFRQRQQFDFAIDTFGHRAFGHKIDAGLARATGRHLSQVPKVSDADLIHRRRPIVDVESVNQTRNRRPFKVEVLRDLLLSQHVNVPPYRDSTVEKKRGCAPPHAPAP
complement(411772..411960)         hypothetical protein; JE55_370                                                       N/A                 MRSESTHDGRGEVWSAWDEDRSTGRVTARGFVFDDAMDRIVWAMDHAGDRAVAVLAIGAAAA
complement(412765..413352)         hypothetical protein; JE55_371                                                       N/A                 MMDLMERAGIAMSVRGQFTDPIADPKVTLGALAFANDLGRSLFRIKAGQQVTRESIRHATLLLAQMIRTSGRFKRSRFTGLKRDERRDQRVGHSVERAKVDIIERFALRLLDEWVNDQCMRCEGRGVVRTGGRYICPDCAGSGRRPIDDAARAHALGIPLDEYRRHWSRRFHDMLALLDNVKGSTFDTMSRQLRG
complement(413562..416054)         PHAGE_Staphy_StauST398_2_NC_021323: virulence-associated protein E; JE55_372; phage(gi509139907)     2.88e-55            MSTLDQIVQQLRNADHPELPSGHPVADGKHHRYGPRKKYWYQLREVVSKGAVIGYTGTFGHFSGDDPGTERFQWNGAPLSEEALAETRRRQEAAERAEAERAARAARMAANRACDQWARASEQGASAYLERKQVTAEGVRFDSDGTIFVPMYQYGDEARLVGLQKITPEGAKRFNKGMEKKGAACLLGEVKADDQLVMIAEGYATSRSVRMATAEAFALCVCFDAGGILSTARYLRDAHPNAHVLICADDDWKIEQRMRDWLAEEFDFRSELPFDVAPIRIEAKKTWYMVAAHRRVDDNGVAYVEVTYGNDVLPQRRKRFENAGLKRAYEAAAEVDGVSVVYPTFADRGERKLTDFNDLHVEEGLEAVTRQVQAAILSVLAPASEDVRTAAVDVERPTPAAASAAAGQAEWDGREAENGAHTWERDLARSDKGTLLPTLGNVHLILSNHKAWRGVIEQDDFGGRVMKRKAPPFPQGAVGEWTDMDDQRCVLWLSQRYGISVRTDIVMNAVLLVADATHFHDVREYLGRLEWDGVPRVRSMPSTYLRVADSEYVQLAFMKWMIAAVARVMQPGCKVDNVLILEGKQGARKSTALKVLAGGQWFTDTPIQIGNKDTYAVMAGKWVIELAELDSLNKADSSAVKSFFATAVDRFRNFYGKRATDVPRQCVFAGSVNFDTYLKDESGNRRYWPLRVGGLVDIDGIARVRDQLWAEAVHLYRSGVVWHVTEQERPLFEIEQAERYEGDVYEDKIAKALEYVSHTTMETILADILKLDTSKWTLAEQRRIGKALKSLGWVRKRESTGSRGWYYVREEQEPEAALEAVAAGDDDSPL

#### region 2 ####
618309..618322                     attL                                                                                 N/A                 CCGCTCGCGCGGCA
complement(632210..632515)         PHAGE_Burkho_KS9_NC_013055: hypothetical protein gp28; JE55_554; phage(gi255033760)     1.26e-34            MLGPCVWQRISVADRPTMCVAGIWRILMDQDGSDRNVMSMITVNADGHPLMSRMHKPVDEKRSVVILRPDDWEEWLTTSNVEAARAMLQLYPADEMVSSPK
632976..633365                     hypothetical protein; JE55_555                                                       N/A                 MRTIAEEFSDCDDDWFGFASAQDRKDGHSLRAYLLRYADRIPEYHVVVSVELVLRTEYPPRGVRPPYLSVIHFDPGHSTDLSLTWKRSIEDLKFDSTITYVECGYDIFDSFSDAKMDLTAHGFYIEPFN
complement(633472..634359)         PHAGE_Burkho_KS9_NC_013055: hypothetical protein gp26; JE55_556; phage(gi255033758)     1.20e-110           MNKKLLATLCVALALSACGGGDDAAPANSGPAIRMTYSGAPIIATRVARAMAAVDASSPVVPSAVNAQATIDALQAAFKARGADVGVYPGVIDGTTLHQLVQAENGGVGPTQADVINSKTNISEWVLMNFELDDMTGYVDAPEKIAAVDQFRSDLQIYAAREYLKGRVVHAVLPIVSCAPVRTERITGESGSTYNQLYFPASRELYTAINMASTGGVVGFRTVGGQWQSDPAHMGADCSTPDQVAQDAQINSIVDPLTINYKAALETIDQCKHNPEAIPEYIRGAQCWGIEPVKK
complement(634470..635258)         PHAGE_Burkho_KS9_NC_013055: DNA adenine methylase gp25; JE55_557; phage(gi255033757)     4.85e-173           MANPIIPWIGGKRRLADHLIPRFPSHDCYVEVFAGGAALYFLRPPAKVEVINDVNGELINLYRVVQHHLEEFVRQFKWALTSRQVFEWLKLTVPETLTDIQRAARFYYLQKSCFGGKLEGQTFGTATTTPPGLNLLRIEEELSAAHLRLANTFVERLDWTTCIDRYDRPHTLFYLDPPYYETEGYGVAFPFAQYEKMAERLRSIKGRAIVSLNDHAEIRRVFSGYHIETVPIDYTVGGGKGVSRSELIIFSWDDAAQPAGLF
complement(635426..635920)         PHAGE_Burkho_KS9_NC_013055: Rz gp24; JE55_558; phage(gi255033755)                    1.58e-30            MIWIDPRFWLAVIVTIVIGSAGGYFKGHDDGVRTTTLAAQRDKTKAVEAARAEEQRRTAAQMEIAKHASKQRDQARADAAAAASAADGLRKQVAVLGTVACRPAASVGSAPAVDPIGVLADVLGRIDDRAGELAKVADERGIAGQQCERSYDALMGDARTERPQ
complement(635917..636411)         PHAGE_Burkho_BcepC6B_NC_005887: putative endolysin protein; JE55_559; phage(gi48697212)     4.15e-93            MARISVAAAGGANRIAFLDMIATSELSSALLAKSDDGYNVLVGSTSSRPLLFASYATHPNVLNRQIAVPSTAAGRYQILTRWWRIYQTQMKLPDFGPVSQDRYALQQLRERGALPLIDAGNFVEAVAKVRTVWASLTGAGYGQHEHDIEYLLAAYRAAGGEVAA
complement(636414..636698)         PHAGE_Burkho_KS9_NC_013055: holin gp22; JE55_560; phage(gi255033753)                 2.02e-52            MQEHEKTILELILMGGLIGIAKVLVGNEPLSFRLVVGRAVLGSATSMVAGIALLQIPDLPPIALLGLGSAFGIVGSQYLEVLLRRKAKQLFGEK
complement(636756..637493)         PHAGE_Burkho_KS9_NC_013055: hypothetical protein gp21; JE55_561; phage(gi255033752)     1.91e-72            MGVGFQAFTDGGVFQIDGLTPNYQLIQRLEAVSQQTTVETVYNNASIQYVGTYWVCSFSFTADQPLYAFSADPSVGVSLWDAKASKDGRTYTVRFITEGQATVRLFVFSNVPATGSRYGLQVFSPNGTLIADAASPFFRVLDVIESRYMGDTGWTVTGSPNPAWEQRAYGRPVLISGMWPSHYIWGSSNSNQRLWDILEVGTVRVNGDVVSWGTRIYNGGRTPNITTFRECWHTRFMVLDGTGIV
complement(637493..637798)         PHAGE_Burkho_KS9_NC_013055: hypothetical protein gp20; JE55_562; phage(gi255033751)     1.72e-29            MPAGLQIFDGNGRLLLDGTTRCGRLRGMLWIDGADGSQSADLSGGEPFWAFMPAWLFKHISMKAPVPNIEINAGGVRWWYSMDGGSDYRTPVVGWLIYGVF
complement(637798..641169)         PHAGE_Burkho_KS9_NC_013055: tail tip fiber protein gp19; JE55_563; phage(gi255033750)     0.0                 MRGGGIRDVVGFKKSGGGRAPIEASDTARSVSYARVLDILSEGEIEGPVNGLKSVLLDGTPLAGDDGSINFPGASVEFRTGSQDQDYIPGFPAVENEIGVSVELRGDTPYSRAVTNLELSAVRVRLSTPQFQRVDPHTGDVKGYRVDYQIEIATDDGAYEIALKAAFDIKVSGKYERSHRVNLPPARRGWMVRIRRLTPNANSTTIADTTTVESVTEIIDAKLRYPNTALAGVMIDASQFQRVATRSYHMRGRRVRIPSNYDPTTRGYSGDWDGTFKVGYTNNPAWVFYDMATHPRYGMGHRIAANQLDRYQLYKIARYCDELVPDGKGGQEPRMTCNVYLQSRADAYKVLADLASVFRGVTYWSASQIWAVANMPAEPVYTYTAGNVIDGKFVRQGTDRKTRYTVALVSWSDPANHYQQAVEAVEDRDGKLRYGVRQTEITAIGCTSQGQAQRVGKWALLTSRMETQEVTFSVGLDGIFALPGQIIRVADSALAGRPISGRVHAVAGRTITVDRDVKVKPGDRLIVNLPSGRNETRIVYGVSGRDVTVSSDWSASPQPEAVWAVESDDLAVPMYQVVSVAERTDDQSLRFEITVVQHEPGKFDNVDFGTRIEERPVTVIPPSIQPPPANVRLSSYSRIDQGAASTIMVVAWDAVQGAVQYEVHWRKDNGDWNFAGRTGSVNADVPGIYAGAYMARVVAINAMNVPSLPAFSALTNMQGKTTPPPAVTFLRATSQIMGIGLEWGFPEGALDTQRTELWYSTTSDRSTAKKLGDFAFPQHLYTMDGLHAGASFFFWARLVDRSGNVGPWYPDGVGVNGQSSSDATAILDYLKGEIGKEELTKELQSEIKGATDFIGDAKHQLEQLAEAVGDVKSNVERVDGVVAQWSPEWAGATDGYAGDTKKLAGVWTQWSALTDKISALARRVDRVASVAGESAAQVRVEQITRVDENTAMAQRIETTEASVGTVSAAVQENSQAIASVDGRVKAYYTLKVQAAVGGGMYVAGMSVGIDNNNGVTQSQILFQADRFGLLSLANGSWYTPFVIENGEVFINRGFIGKGWITNLMIGDVIQSNDYVAGQRGWRIDKNGSIEMNDADGGGRTVINRFGGQVYGPNGGLLVRWGRW
complement(641166..641747)         PHAGE_Burkho_KS9_NC_013055: tail component protein gp18; JE55_564; phage(gi255033749)     9.17e-66            MSEKVRPIRLYGYLGARFGRVRKLVVSSPAQAIRALCVMVPGFERELMESREKGITYAVFAGRRNLGVGDLKFPCGDEDIRIAPILQGAKAGGLFQTVLGAVMAAVGYYFGWTGIGAVIGNMGVAMMAGGISQLLAPSPRGLSAKDSPQNQASYVFNGPVNTTAQGGPVPVLYGELEIGSAVGSAGIYAEDQL
complement(641744..642208)         PHAGE_Burkho_KS9_NC_013055: tail component protein gp17; JE55_565; phage(gi255033748)     1.33e-43            MPWHIVEVRRGDDGVVRSGALVTVEPVGFQVPLVGRSFAHGVLDCYTLVRDWYRIEQEIWLPDFDRRDSWWENGGDLYMQHYRDAGFVALPGSDPVPERGDVILMQIRAPVPNHAGVYLGDGTMLHHLYDRLSSRDVYGGYWREVTRLILRFEG
complement(642480..643172)         PHAGE_Burkho_KS9_NC_013055: minor tail protein gp16; JE55_566; phage(gi255033747)     5.69e-98            MSITADVQQLEPGRLIELFELDATEIGGQVAYFHAHRQAGSIVWRGVAYSPWPIVAEGFERTSAGRQPVPTLKVGNVDGSISSLCLALADLVGAKITRRRTLTKYLDATNFPNGQNPSADPNEEMPLEVWLIERKSHEDNESVEFELSSPLDFDGEQLPRRQIIPNLCIWLYRGPECGYTGGPCADANDAPTDDPAKDRCSQSLRGCKLRYGVNNPLPYGGFPAAGLVRT
complement(643169..644572)         PHAGE_Burkho_KS9_NC_013055: hypothetical protein gp15; JE55_567; phage(gi255033746)     3.82e-14            MGQLEKIDLGAEGTGIGGDSPRSANERMNRNVDVLSHQLPVQSAATVTSSQTLTADHIGKRISVNFAVEGGVIKMRRASTCEPDSVVWIVNVGTKVFGIGVDDNSGDSIALRSLNPGEAAVIDTDGVRAWRVLLRGRAWAGDENVGGKLTVGGDLSVASQNDEGHIWLGKMPGYFYGNSGSVGWWSPDAGGSYQYLLNDHTFRVNGEVVAVCDKGNALRFDWGKKTAGQLGATVDGKYLGYLWHSGNLAQPMTLDTPQYVGTKKTFTQAQEIAVGATGLHTQASLYLNGMGGLSYLGFSGLNNTVGAQFRISSNTSVAELQCVNYNATTFGVLTASNFNQASDRAFKSDIQTLENVMARLRGKRGVTFLQKNNPEAGRQAGVIANEWWDFPELLGEGPEIDEDGDFIVHQYDESGKEIFGASGQPKGRPSLTFRYTNAVGVLLAGLLETDAALQDAIRRIAELEAAK
complement(644902..647703)         PHAGE_Pseudo_vB_PaeS_PM105_NC_028667: putative tail length tape-measure protein; JE55_568; phage(gi966198725)     7.85e-30            MKGTSGNLGQLVVQLTMDPATYRASLRTAENDTKAFSDAVDKSAQKAGQSMNSVGVHAAGARRELMVMAHEVVTGSWKNLAGSAMVFAEQIDLMSVALSPVGLAVGAVAATIGTFAVGIYKGAQEVSTFNKSIQLTGNYAGMTTSSIAAMSVAVADATHASVGSARQSVQALVSTGQIAGEALQVLGQSMIRQHELTGASLDDLAKDYARMPEGVAKWAEEHNRSMHFMTTAQYEHIRAIEETGDRQKAMLETAKLLDAHLRGESLSNLGALERAWRGVGSAIDGAWEWLKSIGKAETTAERVAAAKADLRHVEDAARSGTVAMRPGAMDAARARLAEAEKAAADEAAAAKKKSDDARTQEAGIAASDYLKRLRDEARGISRVNEALDDYKRKVADYNKANPENKVSAGQMAADMAEIRKKYADRSGASDANRIRKSLLDAALQETKNSLELIQNAHKNSDDQLQALHKATLISDHAFYSAQIALADDSAAKKIAAYEREKKTLQSAYWKAPADERIRLTKEIGEVDTKISKVREENASRDLVLLTQQEDAQRRYLKSISDTRDALLAQAGVSVPRAMHEYDDRNRGALLQAASTGDVQGAAFIEQNRQLTKLSAQYNDIIAQASCVQRKISLDQQEGLTGWIDGLSQLRANSADTVASLQALYDEVNRLSWQTTDEGVLRSLDVMRDRIRQSMLDSSNYLKEFTDAGRSAFSGLFQDIAAGTKTPAEAVRSMVISMLGSFAQLFANKAYTGLMGMLFDGALSSAGGMGGSAYGFTALSSIAGSGALFGVGAGMKFAGGGLISGPGTGTSDSILARVSNREFIVRADVVSQPGVLPLLEDLNNGRGLSRLASFARGGLVSRWRAAGGDYSDVGLNLSVSAPVYVQSSDEEQSTQSSTSAAQALADGLKQKMRALVLGETRPGGIIYSFVKNGR
complement(647727..647918)         PHAGE_Pseudo_PS_1_NC_029066: hypothetical protein; JE55_569; phage(gi985757709)      1.24e-09            MTTQWRVTGISGFGGASMLHTGLDYSALESVFRLLGVKRKRRAALFQQIRVMEEAALEVLLSD
complement(648104..648442)         PHAGE_Synech_S_CBS3_NC_015465: hypothetical protein; JE55_570; phage(gi331028019)     2.20e-11            MSYCLTKAPTFTMKVTVVEPGTSSSGDVETHEFVAVFKRISMTEWDEMRASGRADQSIIADLLVGWHGLVDATGNDVPFTSETRDALLSIPHALRGTVVAFMTGASGAGLKN
complement(648501..649439)         PHAGE_Synech_S_CBS1_NC_016164: hypothetical protein; JE55_571; phage(gi356870806)     4.01e-61            MGSPKSMRNSVVLAALQTAVGTPAVPKGATDAILVSNPSAKPISAEYTGRDLVRPYFGSSEQLPAGAHAELDFEVEVAGSGTAGVAPAWGRLLVACNFAETVTDKVDVKYRPVSTAVQTPLTLYYYLDGLLHKLTDARGTVSWDFTVKQIPKMKFHFMGVYNPVIDSPLPADTDFSKFLRPKLASTEATTWAMHGYTGPLQALSLDLANSLTWAALIGYEGAEINDRQPTGKITMQLGSVADKNWWQSVKDATTGALTITQGNVPGNIVQFDAPKVQLTDPSYSDQDKKVMLDATLTINPDRGNDELVITVK
complement(649470..649895)         PHAGE_Synech_S_CBS1_NC_016164: hypothetical protein; JE55_572; phage(gi356870805)     5.37e-06            MTTLRERFIEQLMAALSADESLRDKGVVIERSLFAAFASSEPRVIVVHRGSDPVVEENIGVTTRECGVAVSAVVHADAPDREADVMFEVVHPIVMAFQADGLVGVREAGTDEPQAGDAEGGVGVVTMRYLFLYQTRAGHLD
complement(649892..650188)         hypothetical protein; JE55_573                                                       N/A                 MYNPSVIWAAIGAVGMLKTAIIEESGAELQVGLFAPEEIDLDGRVTVSRHRIEYQTADAPDLRRSIIVVIDSVRYSIYRPPRRTDDGFFSVAELEVKQ
complement(650191..650526)         PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; JE55_574; phage(gi169257303)     9.86e-05            MRNYIQDGDILTVTLTKAVASGDLVLLGSSKTPAVAYGSYAANVPGEYALDGVFELPAVAADAAVVGDLAYFDEATSNVTAKADGATPIGIYADTKAANVGRARVRLLRTQ
complement(650592..652670)         PHAGE_Stenot_S1_NC_011589: putative major head protein; JE55_575; phage(gi213163906)     1.04e-94            MPRSTNSPMSPQARGTSMPLMSRLMPVSSFNAEARTVEVTWTAGAQVMRYDWMRDRPYLEELSTAPGAVRMDRLSSGTAPVINNHERWRGLDGVLGVVQAADLDSAAGTGSATLRFSRRDTAEPYFQDVQDGILRNVSVGYRTYRIEMIQPGQEGNEMWIYRAVDWEPTEISVVDINADAGSTTRNDPSQPFTGQIPTFPCEFVERGAAVQPTGAAAPLINQGAETQMHVQDNTRTQSTPVQAPTQASDNVTTTSSADNARAEGERAERQRIIDIGAAVRASTLDGQQALIDGFIERGIGIDAVRAEVLRMQAERSNASNIRGQANIQTVSDETDVRRAAMTDALMHRLNPRHTLTDAACQYRGMTLRELCRVGLEAAHIDTRGMDVRALAGVALGMGERGGYHTTSDLPVVFGNVINRTLRDAYTAAPRSFSAWARQGVLTDFRAATRVMVDGNLKLEKVNEAGEYKTGTLVDAGEVIQLGTYGKVISFTRQMIINDDLSALERVPLFFGRAAANLESDLVYSALTGGGKMSDGKPLFDAAHNNVGTAAAISIDSLSEARKMMRTQKAPGDDSVVNVTPKFLLVPAALETVAGQYTSNQYTPTVAKEQNPFYGVLTPVVEPRLDALSSTAWYLAADPATIDTVEFCYLEGEQGLYTEQSLDFDVDGLKVKARLDFAAKAVDHRGLFRNAGK
complement(652660..654183)         PHAGE_Stenot_S1_NC_011589: putative portal protein; JE55_576; phage(gi213163905)     4.87e-101           MRANILEKMIAVVSPVWGVRRAQARMALDAVRGFDGAKRGPRAVGWRASGASASAELAPALATLRNRSRDLVRNNGYIKHALNVKVANLIGTGIRAKFDNKVLQKMWKRWIKECDAAGLLDFNGIQAQCYRAMDEAGEVFVRFRTRFPDDGLEVPLQLQVLEAEYLDSTKTGPTNTGGFVITGVQFDAIGRRVGYWFFDRHPGEIALVPRDMQSHFVPASEVIHLFDAIKRPGSVRGFPEFSTSIWKVRDLDEYQDAELVRKKIEACFAAFVKTNDESYQPGRPVAVAGAKQDAPRVEALSPGMIEYLRNGEEIQFAAPAASDGYEEHVRIELRAIAAGCDITYEQLTGDYSQVNFTSGRMGKMEFKRIMEQRQWLIVIPMLCERVAMRFVSTAFLAGKTKLATCDVTWTPERIEFIDPAREANGLIALIEARLKSRKQGIRELGDDPEEVDEEIAADPLNASELLPGGRSSGTGATRSSPEARSRTFSTHKRPRKRAFSFGGKHAP
complement(654185..654391)         hypothetical protein; JE55_577                                                       N/A                 MAFTQNDLIAVERAIASGALTVEYNGKKTTFRSIADLLAARDLIKADVDAASGGQRRPRSSIAIIERF
complement(654394..656463)         PHAGE_Stenot_S1_NC_011589: putative terminase large subunit; JE55_578; phage(gi213163902)     2.50e-101           MGAIEAFLKTIKEAIQPDERIGIAEWSERHRILPENSPEPGQWRNSRTPYLVGIMDALSGMSSNVTRYAHDDQRPFDNSWVVIVGLQKGHQLGGSALGENFIGRSITTAAGNILCVFATKDDAEKWEMDRFEPMRLATRALRRRVKDSIRKNSANTKLRKRYPGGMMNLVSATRAGRLKSTTVRYALLEEVDEYELNVDGQGNPIDLAVNRTSNFGRRAKVFANSTPTIKRRSQIEKLYEQGDQRRYFVPCPHCGHPQFFDWHKGMKYTSGEPETVRYYCESCGAGGREHEWKRGYDNAYWMPTAKGDGKTASFHLSAIYAPLGWRPWVEMAADHEAGNLDVEKKIAFLNNGLAETYEDKAAEMKWQTIKRRAQPYKLRTIPLGCLVLTAAVDTQNDRLEVEIGGWGRGMRNWTIDHVVLRGDPATKAPWEALDKLLEMPIVNAFGVPMRIELCAVDSGGGRTQDVYDYCRLRKHRGVFAIKGARDKHKPIIGRPTDQDVMKNGRTHKGGVQLWPVGTDTAKSRIYSALSRDEELEVADQQMLFSTDLEDEYFEQLCAEAYNAAKDRWDKLRKRNEALDLKVYNLACAYHPKLRLNAFQEADWAAVEAVVEPRVRDLFAELAAEVEPDSVRAASDTESDAGDPALEQHEVEAAVIEVEPVVSALEPVEPEPRPNATGWVPRRDNWLTRR
complement(656411..657040)         hypothetical protein; JE55_579                                                       N/A                 MAEMSQRAFARHMNVALNSVQKAIKAGRISLNANGKIDSEAAEAAWRRNTDESRRSFEDLSRATPALSSASLPSSLGDDDDDFPAGAKNEDPHMAKYRAARAHREETRLERERMELARELGNTLALADAQRIAFTAFRTVRDNVMNVPVRVKDILAAEDSAARVESILEEELARALSSVDVDTLMQDQDGDADGSDRSLPEDDQGGDSA
complement(657222..657980)         PHAGE_Pseudo_MD8_NC_031091: hypothetical protein; JE55_580; phage(gi100064)          5.07e-40            MSGRSFSLRVDTSKLEASFDDHVQRQLPFAISKTLNDTAQAAKAALADTMREVFDRPTPYTMRSLRIRSATKQRLEARVGFIDESFKGTPATTYLMPQVSGGPRSVKRVEVLLRARGLLPSDMYVVPGAAAQLDQYGNFSRGQYSKILAQLQASRDRTQNETVRSRQRRKRDPLRDARYFVGRPGGGKMPLGVWARYQFAAGYAVRPVLMFVRAPRYGVRFPFDRIVETASARTLPTAFDAALTLAMSTRRR
complement(658199..658963)         dnaJ central domain protein; JE55_581                                                N/A                 MNVQSQLNDQAVDGEPTLAALAFAGELGKLLWHMKYGQDVSYVHDVKRSPFRRAILLLSHRIRTSRKFSRAKFTGLDHQQAVDKRRGLKVEVAKADIIERFARRVIVEWCADICTDCDGHGVVGRSRRDEPTDRDIECPACNGRRKVVDDEQRVPFAHNGRSPMVFREYGECPECDGVGKIRVSESGVRVGRQICKSCAGSGKAAIDEPARASALGISLNLYRSQWPRHFVAALALLDGVDGRVSDTVRRKMQR
complement(659276..662014)         PHAGE_Staphy_StauST398_2_NC_021323: virulence-associated protein E; JE55_582; phage(gi509139907)     1.31e-53            MSTIDQIIAQLDAAGHPRLPDGHPIADGKPHRYGPKKKHWYSLHEIVRGGQVVGYTGAFGEWGGDDNGAQKFVWQGGALPPDVLAETRRRQEATERAEEEKRRNAAKLAANRARQQWGEAAEEGTSAYLERKQITAEGVRFAEDGTLFVPLLRYTVDDVRMVGLQKITPDGAKRFNKGTEKKGAECRLGTLSGDDKIVMVAEGYATGRSIRMATDEAIPLSVCIDAGNIMSAARALRDAYPDVHILICADDDWKVEQQMRGWLADKLGYRGDLVVGADPVAIEHRGVVHHVSAEVAQINGGVPFLELRITTESRPEQIKRFENTGRARAEEAAAAVGNASVTFPVFSNREDRKLTDFNDLHCEEGIHVVKEQIACAILSALAPAASDVKPFPHLHAVERGADPMFDQAVAAVREAHRVSVSLVQRQLKIGYNRAARLLEDMEKAGIVSEENDKGSRRVLDAGGEFSPSSAGAAADELPPEEERQPRSWYADLRRTNSGALLPTVDNIFAILSNDPKWDGVLGFELFALRIVKLKPPPFPGGEVGEWTDRDDARCALWLGQRYAVSPRADLISDAVFLVAERNSYHEVRDYLASLTWDGTPRLKNWLVTYLGAEDTEYVRLAGFKWLVASVGRVMKPGCKMDNVLILEGAQDAGKSSAFRTIFSQRWFTDANIIIGDKDSYAVMAGKWVIELAELDALSKSESSNSKRFFSTAVDTYRPPYAKRAIDVPRQSVFAGTVNFDTYLKDESGNRRYWPVKVADVLNLKGLAADRNQIWAEAYQTYCEWDAANMEADGVLPAPWQVLPEEKPLFRVEQDARYEGDVFEPMIARFIELRDKVTMEEILGECLKLDISKWTPAEQRRIGKAIKSIGWVRKRESKGARGWYYERPEEVEIVARPASAVRAAAEVGDESCF
complement(662570..663094)         PHAGE_Burkho_KS9_NC_013055: hypothetical protein gp44; JE55_583; phage(gi255033727)     1.69e-40            MTCRYSGTEWLDVLYTSIRNTPGGVADAANFLTARRGRSISAEALRLRLRAVDENRLSMEMFELLIEWMDERRSTYALDALYALNERFGLRASEAHAMPTGDPAEALVDEALQIAKHTGEVADSVRAALEDKVVSECEATTITTAARSQQRALDRLIRLVRIAVRATKPPFNRD
complement(663169..663375)         PHAGE_Pseudo_PAJU2_NC_011373: putative repressor Cro; JE55_584; phage(gi209552479)     2.57e-13            MKSNREPMLETVLRRLNQVKGDWPRIADESTVPYQTITKIACGFVRDPRVSTVQALYDYFDSRPEHAA
663469..663996                     PHAGE_Escher_TL_2011b_NC_019445: helix-turn-helix protein; JE55_585; phage(gi418487631)     1.25e-08            MSKDLSMRKFLADKVRLWMGRVPAADTQAKLAARAKMSQSSIHRVLHQDTEPELTTAYKLASAFGISIAQLLDDSDAEGIAALPVDPKRFARLPASEKEKIRAFAEFVVAAYEASTGGADELKSLSETIPAKDDERSLVERVAQRDLTTDTLSEHETNSQPARKRRKIRGASNSH
664563..664778                     hypothetical protein; JE55_586                                                       N/A                 MKPLFDAHSAARRAAIQRMQQSYFPPVKPIESSIAWRFVMVAAVVVILVNLLPGNDTASSSPTRTHSRVQV
664781..664933                     hypothetical protein; JE55_587                                                       N/A                 MGRNRKSQTGAARTTIALLVIFIAVAVSTFRSEMSMVNHVAVVNSSSHAG
664941..665150                     hypothetical protein; JE55_588                                                       N/A                 MTAVDLISDEEIAREHRLRCLPGPASASLTNPALRICLANRAALRTRDQQPHARHVDLKSRAAGESEQE
665155..665514                     putative beta-hexosaminidase; JE55_589                                               N/A                 MPRPIKRFETDAPRGNTLSLRTIVRYDREARRPSTPIPVGQTVVMRRPIADSIYTEYLIMDGLDVIRTQISIPCEADCESAINAFRRQRKAAEQAAQVAIATAAQQAKRRSKRGAKEVA
665511..665957                     putative holo-[acyl-carrier-protein] synthase; JE55_590                              N/A                 MKRATTYMPPTTYSEIVAAANRQHERRIAELKRAAKHIIAVERDLTKLAESTIYVDIDRYSMHLVDCRKIGDNAGRAQWGLRILPSVSLGNVPDRLVAGFLSLGWRVERVDLDGHYTKVVLRRPKTQLRLRLDCSLAYASSLELQEVA
665957..667273                     PHAGE_Burkho_AH2_NC_018283: transcriptional regulator; JE55_591; phage(gi399529067)     2.29e-24            MNDRTQQLDLTAPIQTGNTKAAAAQAGATSADLWMVPYDQIHYDPADNIRAVDLAWVLELSVLMIQHGYDKGSPLHCYVRKVDGKDLFYVYKGQHRYLAAGKAIKAGKDLGKIPLVVRDSREVDRAKMVVDGYHNNRQKAASPLDLASAIAELRDIHQYDPKRICLELNITEQTIRDAALLEKAPAELHDLVRGGAIAGTLAIEEIRAHGGDKALERIVSGLSKAKDAGKTKVTKKHLHTASPKSVAATAAAEPQRKIGEQHAKQLLQALQSVLHDPGFGKLSPGTIAGVHRALTGFEDLLDAVPTRRPKYPIAKANEHGVYEPSEILSAPISKRTGRASVEIRLAQIAEGDWEFGFSYAFNSAGGSSPCKRIDGESPGRYRTRVEAIRAAVQVLTRTLESTSASKAKEMAGVRRWLDKLFTMPDPDWTPEMAREAAQ
667270..667713                     hypothetical protein; JE55_592                                                       N/A                 MTPRPALSTPRPLPRKREHRKQRTAIALASVEGKAIATEQRGRAPAKAIQKDEATLARRTIQVNDASAVARRGRAERIEALRATIRDLVVEISHAADVELLDLMADEVGSFARHKAAQEARTWAATAGVTLETGLMQLDRAIPFNLK
667724..669337                     PHAGE_Pseudo_KPP25_NC_024123: hypothetical protein; JE55_593; phage(gi639163140)     1.28e-36            MTIDKNRADALLYEHDDGRYAVASTAEDATFTRDDPAWHRLGPVIVYGSTTASLVEGPAPLTAQAEQHADWRGDFERQANAAGFDLSREEWGGEYCHPDSADAFRWYYTGRLDEACSGTPSSQPAAAPIDTLPNAQWTRHGSGSSEWWSFKGYKARKDAADQWVLRKGGDELYRHTFLQVVMAHAEHAILATSANETGAEGTTSDSWARRFEQCMHSLVPALNYIQAHPGQFDARPDDDLLRIIGAWFPKLSAVVSSPATAAAVPADEWAALLDRAETIVVDAIRRMRAAHVHCQDLLRDAESFMEDKSRAAASATASIPAGWILVRRKPNETDIEALGDLKPFDNDVYVVDVWDLVINQAMLPCPADPAATDSEAAYSAASQPAQADELTAERIDAVIASGDYVPGQYGWLIHKSGRVEIRGVTASPPYRSTAAADVIVERRRQILKKGWTAEHDDGHACGEIAALAAYYAMPAGARDWPATDTGYGATFGQAILPDGWSAKIGDDRRRELVKAGALILAEIERLDRAVALAGGSR
669334..669594                     hypothetical protein; JE55_594                                                       N/A                 MTTPPKRAVQFRLELQADTVVHLVAALTDLATQICADRLSAHAISGGAFSSHECWLTVADHPTHAEYIEQLKQWRDRITADRGGNA
669591..669917                     helix-turn-helix domain protein; JE55_595                                            N/A                 MRTLDLIECAEFLKIDRTTLLDIVHRGDILGAKIGRAWVFLEDDVVAYLREQVQAQTQKRIEQIRGGSSSSTDDRVHRAITKQLSATDPRRPGRKARPLPRLPDAIAA
669901..670908                     phosphoribosyl transferase domain protein; JE55_596                                  N/A                 MPLRRKVRGAPYRLQLYTDIMAAPPKPTNRPPSRPARLTTLLGKRAAGRPPHREFGFPENVDVPLFLWTEDGPLKEHPDYRAAKAGDTDAAIRLVAAVGTPIARQIKEKQEAGAWPANCIFVAPHAREALGDNAIPQTFAVLLSLTTGGQLDLEIIQTAKVYHTGADAMERMIARPSFSGQVVRDGRYVLVDDVSTMGGTLCDLADHIRRGGGTVVGVVVLVNASRSGRLFPAKKTVSRLEKEYGNDIREIFGIEPAALTADEAQYLVGFKTADEIRGRCAKARETTDQRLRSRGILGDELEVGKRTQIIASSARDAAFRSRRWIGGRNTKKDRN
670773..670786                     attR                                                                                 N/A                 CCGCTCGCGCGGCA
complement(670925..672124)         PHAGE_Pseudo_PAJU2_NC_011373: putative integrase; JE55_597; phage(gi209552450)       1.04e-13            MANKRLRPSGTWEYTIKRAKLLPKPLSLTFETEEEGDAYVARLEQLLDAGIVPDEVVEQREAIATTGDAIRAYLRRVSVPDSEVQVLNALLGRAAIKAKSLATLDYQWVEQWVTTMKRHDHLSPSTIRHYVGALARCFDWVVRSGTPLLATNPLRLLPKRYATYTDEDRVAVEAQDVDAKEDVHRDRRPSEAEQTEIRRLMAGGKPNGRERAFDLPYRPALVFLFELGIESAMRMREMYTLEIDQFEVGRRTVALEKTKNGSKRSVPLTTIAIAAYERYVAAVNGGDPEMSGFTFDAGRLFPWVDDMEASMRAEGVPLLKRKVLARVSSRLSAQFGRIFDAAGCSDLVFHDLRHEATSRLYERTTLSDVQIAKITGHTNPKVLMRYANLRGSDLAERLW

#### region 3 ####
complement(3072969..3073286)       PHAGE_Pseudo_PAJU2_NC_011373: hypothetical protein; JE55_2738; phage(gi209552427)     2.23e-08            MAIKQLVSFNRALSHLRVEAGEDDDAIKDLIDAASGIVVDYLKLEEIPETWALEDDNTTSTVPGPVRSAVLLVLGTLYDDREGTTDPLTPAVESLLMRLRDPAVA
complement(3073276..3074565)       PHAGE_Pseudo_PAJU2_NC_011373: putative portal protein; JE55_2739; phage(gi209552425)     3.49e-101           MRLLSWIRKAAPPIPVGGGNSIAGVVREPFAGAWQAGMGIDSRHDLLAFSAVYACVDRIASDISKLGIRYVKQVGNIWQDASAPRFTGPLRRPNPYQNRIQFVKAWQVSKLLAGNTYVLLVRDMLRNVTAMYVLDPARVIPLVAPSGAVFYQVAADPLRGVPEQVTIPASEIIHDRGICPWHPLIGVSPIVAAAAAGTMGNRIQQNSRKFFGNMSRPGGILSAPGKISDETANRLKTHWETNYGGENAGRLAVVGDGLKYETVMMTATDAQLVEQLRWAVEDVARCYHVPLYKIGADPTGSKTAANIGALEQSYYTDCLQAPIEELELCLDDGFEVPDGQGFDVDVRGLLRMDPAARYDAHSKAVGGGWMAPNEARAAENMPPVPGGDTPYLQQQNYSLGALAKRDTNPAPSSATLTSAPESKEPTNGN
3074265..3074276                   attL                                                                                 N/A                 GAATTCGATTTT
complement(3074565..3074744)       hypothetical protein; JE55_2740                                                      N/A                 MQTYEVAVAFPYKGRMRQVGERIEVEQEQHVALLRLLGKIRDVAPKRSTYKRRDMRPGD
complement(3074757..3076088)       PHAGE_Pseudo_PAJU2_NC_011373: structural protein; JE55_2741; phage(gi209552422)      1.14e-92            MTIAQQLAALAKKRADHLARQKALMDGAAADGARTLNENEATEYDQIGLELKSLDTHEARLKEQQAIEAKSAVPVAGGPAAHSPVIVKPNVTKGTAFTRYAIALARSKGNLMQAAEIAKQWKDSTPEVEIVLKAAVAAGTTTDPAWAGPLVQYQDMASEFIELLRPATIVGRIEGMRRVPFNVRVPGQTTGSSVGWVGEGKPAPVSALAFNTTTLGFSKVAGIVAITEELARFSTPSAEGVIQQDLISTISQFLDQQFIDPAVAAGANGLSPASITNGVKAIPASGKDAAAVRADVKKVFQAYIAANLSVAGAVWIMSETTALSLSLMLNALGQPEFPGLTMAGGTFFGLPAILSQTVGDNIVLAKASEILFADDGGVTLDVSREASLQMDSAPVAGATELVSLWQNGFIAMKAERFINWKRRRVEGVQYISGAAYGDAAQAG
complement(3076703..3078223)       PHAGE_Pseudo_PAJU2_NC_011373: putative terminase; JE55_2742; phage(gi209552421)      0.0                 MGTPRVKRVSRGERNIRWIEEHCRIPEGRLVGQPVKLTKEQRGWIKRIYDTPTRTFILSMARKNAKTALSAFLVLLHLVGPEAQPNSQLYSAAQSRDQAAVLFELAAKVVRMSEDLSQYVTIRDTAKELLCHDLGTIYKALSADAATKFGLSPALTIHDELGQVKGPRSELYEALETASAAQESPLSIVISTQAPTDGDLLSLLIDDALSGADPRLKVALYTAPLDMDPFSDEAIRLANPHFDVFMNREEVRRMASDAKRLPSRESAYRNLVLNQRVEARNPFVARAIWMENSGEPAELDGEDVYGGLDLSSVSDLTALVLVSEAGDVHPTFWLPEDGLEAKARADRVPYDVWARDGLLQTTPGRAIEYEFVAEHLRGVFDRCNVRALAFDRYNMLFLKPWLERVGFSEEELSRFVEFGQGFISMSPAIRELEARLLARKLRHGGHPVLQMCAVNTVAVSDPAGNRKFTKQKSTGRTDGMVALAMAVGVTQQNATESEIEPQMFFI
complement(3078205..3078645)       PHAGE_Pseudo_PAJU2_NC_011373: hypothetical protein; JE55_2743; phage(gi209552420)     4.60e-34            MAQRGRKSAASIVTAPAAPVASEQRLAPPLHLSDGERAVWVEVVNDQPASAFTATHSPLLELYCRHITNARVLADEVLNFDRAWLADDDGLKRYDRLLAMSERESRAASSLATRLRITRQAVEHPTTVGRAQANQKKAKKPWELPA
complement(3078749..3079042)       PHAGE_Shigel_SfII_NC_021857: HNH endonuclease; JE55_2744; phage(gi526244692)         4.25e-16            MMSARVQQRTRGSKWMKIRARILRRDPVCVLCAEQDVVRESVVVDHITPLEHGGTDADDNLRGLCADHHDEVTRQQFGYRERKAFGPDGLPIDGSWS
complement(3079039..3079341)       hypothetical protein; JE55_2745                                                      N/A                 MPLYEQILAVFAPLTQPTEIPELGNKVSVRSMSGTDRDRYFDWVRANESEGEPYFDAATAHALNARGELERVLFCWSRASTMGSQPSRRFLPLPPPRSMR
complement(3079811..3080056)       hypothetical protein; JE55_2746                                                      N/A                 MDATRIMYPCISCGRQFQFGPDRYDGRVAKLYGNAPVCNTCWNANFDGWGPSVQSKLLAVLEEMGLPVPPRNKNGWLPRGD
complement(3080232..3080780)       hypothetical protein; JE55_2747                                                      N/A                 MAKKAWSDPLGPHVRIYHSLLNTPAWRVLGPSAVKLYIDMRMMLNGSNNGSIGASLSLMKHKGWTAPTTLAKALYELRALGFIAVTIEGGLRQGSRVPSLYRFTDVEVYEQPKTGVQAIKATHDYRAFESVREAERALTEGLERLRTEGRQKQQSKKKSPVQNSYPSNTETVPEPKNFQYRN
complement(3080780..3081007)       transcriptional Coactivator p15 family protein; JE55_2748                            N/A                 MSTYDSGETIADVQKSATQRIRISHRWYRGRRYVDVRLVVVDHDGDFVPTRQGISIRPELLAQVIQGLLLASREG
complement(3081004..3081240)       hypothetical protein; JE55_2749                                                      N/A                 MPDQKMPRVERAVLEARDKFAQLEALFHVIKERLEDDCTYEWLLADLGAATAAQYAVEMNQIDQQHSGKQSSQSEVIA
complement(3081233..3081511)       PHAGE_Burkho_Bcep176_NC_007497: gp21; JE55_2750; phage(gi77864646)                   7.56e-28            MANLRCRPGDLARVIRAWNPALVGRIVLVGALHSIRESEWNVTLLGAPSMTLTKNRKRLRIGNRMLAHDSYLEPLRGEELLGHVSEREASHA
complement(3081504..3081755)       hypothetical protein; JE55_2751                                                      N/A                 MVNTIKSLDDALRESIDESNIAIEGFQRIRDLLKVIEHLASTNGVAHITILAKEASLIALEYGDIASTGRGAFEASRKEVLHG
complement(3081748..3081930)       hypothetical protein; JE55_2752                                                      N/A                 MSDISIEGKAAQLSALLTSMYGEGFVTFKRLYDHDQEALIWLAADLVDEIKSAVAEARHG
complement(3081927..3082109)       hypothetical protein; JE55_2753                                                      N/A                 MRANAPARPEQSQLPSSYREIINHALREAALAPTVFDALDICGAVMAQLAELCRQAEVSA
complement(3082401..3082766)       helix-turn-helix domain protein; JE55_2754                                           N/A                 MSAKKMADPQASHQEHNLNSETHVNTLFGKKALGKIDRVLLELRRGISLNRFDAERLGDHCLNTTISTLRGEGWLIAGEWETIPTRFGKTARVLRYRLTGYHNPAEVADEIAAILGEGRAT
complement(3082768..3082998)       hypothetical protein; JE55_2755                                                      N/A                 MSHFANAPLSKALVSFDSLPNSAHVDVRTVAGLYGCSVPTVWRRVAAGLIPAAKKFGHSSRWNVGELRKYLMPEAA
complement(3083214..3084059)       hypothetical protein; JE55_2756                                                      N/A                 MEKIEFGRADLPPQFDLTRYRTCETWGASEWWHALAQRYRVRLFSTLTPEEMAEDEDNPDLLETLQAHSLAFLENPLPITEGERRPFPAFGLDSPIRDLTGTDYYDGLLKLNSAWYEGSAALARRALIDNADGVSARAQLANTPAWSIHREAGEPSDKFWIEVNLTASDESLVKEFKAWLKRLRKEAGIPQIPKAFDESHFADWHEKRLLPYLDLTLWAHLHGGPLNLSALGNALFPDEAQRGAKMRDVEPMIRRTTAPRARALMCLETIATLNRQVWPTA
3084042..3084053                   attR                                                                                 N/A                 GAATTCGATTTT
complement(3084151..3085386)       PHAGE_Burkho_BcepC6B_NC_005887: putative integrase protein; JE55_2757; phage(gi48697215)     4.41e-93            MAKRQTNLLSDIELKHLVRAGSPVAKSDGAGLTFTLSAAGTATWVLRFSHGGRRHELTLGNYPDLTLTAARKLAAAKRVEVQQGTNPAVEKRKEKARKDWSVRQLIADYRERVLVTLADSTQRSYGRNLIRVERGMGSLSVRIVGAADVVAEIERTKLGWVEAFTLWCVLKAIFKHAVGKRLIDANPCAGIVLEAIIGKRPPVRQRLMLTHEELNVLMNANMRDVNLYAVRIALATGVRISELYTSLRANLHLDEARWHIPASKTGPAMDIPLAPIVIEWFEHLVDRAGTSEFILPARLSNRLHRHDGDTHVSKDAIREAIDYWIDNHEPQIRRFTPHDLRSTMKSHMRKLGVSRDISEMCLNHKLAGVEGIYDQYTYWDERKVALELWAAYLTTRMRNEEWNVTPMKRSA

#### region 4 ####
3936276..3936290                   attL                                                                                 N/A                 GCGTCGATGAAGGCC
complement(3937811..3938695)       PHAGE_Mycoba_Bactobuster_NC_031279: prohead core protein protease; JE55_3438; phage(gi100061)     2.58e-07            MKPERALDRDAARGDAAGTRYSIYPPQAGEACETVVLIHGVGMNHSVWSPQIDALTARHRVVAYDMLGHGGSALPTVAPTLDEYASQLERLLDALQIEQAHVIGHSMGALVALEFALTHPNRTISVVALNAVYDRTPGQREAVMNRAATLGDAPAAAGIDVTLERWFGDPIPAHLTKAAEAVRDLLLTVDPVGYARTYELFARSDDAHVGRLSNLAVPALFLTGEYDANSNPAMSLAMAAAAPYGRAQIIANERHMMNVTNPAQVNERLLEFLLSASAVSTVGDRHGDAGGCHD
complement(3938685..3939272)       amino acid synthesis family protein; JE55_3439                                       N/A                 MKLEVRKVVTYLEDTFIEGGKAAPRPLKLFAVAAVLRNPWAGRGFVEDLKPEIHGLAPQLGELLTGEILRVTGSGEAIEGYGKAAIVGTSGELEHASALIHTLRFGNHYRKAVGAKSYLAFTNVRGGPNCTISIPLMHKHDEGMRSHYLTVQFSIVDAPAPDELVVALGASIGGRPHHRIGDRYQDLKELESNEA
3939606..3939908                   PHAGE_Shigel_Sf6_NC_005344: gene 56 protein; JE55_3440; phage(gi41057344)            1.03e-14            MVRRAFSEEFKEEAIRLVVEQGYPFSKACGAVGIGETALRRWVAQWRAAHSLDVPSPAQLSADARRIKELEARVAELEREREVLKKSTAFFVKELERSWK
3940145..3940765                   PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; JE55_3441; phage(gi41057343)     2.11e-55            MRQARLVRSKRVHRYRAAQAESLIAPNLLARRFDPAQRDQVWVGDITFVQTRQGWLYVAVVMDLYARRVVGWAFSQHADTDLALKALRRAYDHRRPPPGLMFHSDQGCQYTSTRFLAELRARGTIQSMSRRGNCWDNAVVERFFRSLKNEWIGDQLYVDHRHAEQDITDYLVDFYNHRRLHSAAKGLPPARFEALAAYPGAVSKVA
complement(3940806..3941504)       PHAGE_Strept_phiC31_NC_001978: gp26; JE55_3442; phage(gi40807292)                    1.38e-05            MSNLKIERNAKTLRELTLDKLRGAIVQGYFRPGERLVERTLCDELGVSRTVVREVLRHLETEGLVEIAVGHGPIVARLDPALIGEIYELRGLLEANVARACAERATPELVAKLRNIRTMIEDAFDKEDLSRVLEHTEQFYDAMFEGAGKQVSLTVVKSLNARINQLRALTIAVPGRSGESNREMNALLDAIERQDPEGASAASAAHIRRAAELALNALEEKQKEEEQVRSKA
3941806..3941991                   putative transposase; JE55_3443                                                      N/A                 MDMPMKKKRTVASQAAARGPLPELPKALPDQLVKGPMTPAEVWDLMLAFNKAVIERAMSAR
3942301..3942579                   PROPHAGE_Escher_CFT073: transposase; JE55_3445; phage(gi26246249)                    1.59e-22            MAEALSWQNRPLEAIYPVVFFDALRVKIRDDGVVRAVYLAVGVQADGQRDVLGRWIEQTEDAKFWLDAFNEPKTRGCQDSQSSLITASSFGK
complement(3942554..3942850)       PHAGE_Burkho_phiE12_2_NC_009236: gp8, bacteriophage protein; JE55_3444; phage(gi134288703)     1.44e-53            MTLCLEDWQAALNRGLDVLSFSVPPAFLTVCPNVFQPLFAQAVDDLDAVHGHAGYAVNLSLLRRDPNAASEYFLARRYGPGLDVGDPVLVVTSRMTRP
3953120..3953134                   attR                                                                                 N/A                 GCGTCGATGAAGGCC
