gi|00000000|ref|CP009360.3|  Mycobacterium avium subsp. hominissuis strain OCU464 chromosome, 5178230, gc%: 69.05%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
313160..313171                     attL                                                                                 N/A                 TCGCCCGATAAC
313180..314082                     PHAGE_Mycoba_Mindy_NC_029093: integrase; KV38_01555; phage(gi985759813)              2.39e-41            MycobacteriumaviumsubsphominissuisMTEYLESLRGSFNRSLRVEGKADRTLVLYGQSITYFSDWLRTRGQPADLSSLDRDTVLQWLDHLRRRGLTTGTIRTRWRGLRRFVNWLLAEDIIRTDPLAGIVIDKPEPAPVPVLADEELAALIGACKGKKFVDRRDEAVIRLLIDCGLRVSELTGIDLEHLDLDAESVVVTGKGSRVRPAYFGARTGQALDRYLRERRNHRHASNSALFLGERGRFTPDGVRERLKVRADMAGLDSTKIHPHRFRHTNAHDFLLAGGQERDLKRLMGWRSDTMLERYGASAADHRAREAARRLKRGDRV
314861..315100                     PHAGE_Mycoba_Pumpkin_NC_042027: hypothetical protein; KV38_25000; phage(gi100055)     3.10e-08            MycobacteriumaviumsubsphominissuisMRSQIAAHESWARTPDRSARTANARKAMLDKFEHQVDPDGTLPAAERARRAEHARKAHFKRLALKSARARRRRAGGDAA
315259..315579                     hypothetical protein; KV38_25005                                                     N/A                 MycobacteriumaviumsubsphominissuisMPCTRSCQQDTASQLSRRREAARRSVPLHCNCRDPWVCRCAEAPPSDATVDAGRAAAEHLLHAGCVPLLETKVLQALWRRGGDDRAFAERLHQLTGGLIRMRHERR
315566..316924                     PHAGE_Mycoba_Redno2_NC_022066: DNA helicase; KV38_25010; phage(gi530546711)          1.36e-91            MycobacteriumaviumsubsphominissuisMNVDDELVARGKALGESGKYRPTSQSLGQGDGQPATELALVEHPDAADAPSVGTNTDPDNAIDGAMFILDQPEGIPTIWGRGTQVLWPKGEALMIAGGQGLGKTTLAGQVTAGLLGVGERSVLGLPVTDMGCKVLYLAMDRPRQIARSLRRQFGPEDRDILSERLVVWEGPPPRDLAANPTLLAKMAKYYQAGVVVVDSLKDAAVRLAEDSVGAQWNRARQHLLSQGCQLLELHHSTKRGPAGAPITGVADVYGSTWLTSGCGSIILLVGEPGDPIVSFRHVKQPAEEVGPYQLLHDQSAGHLSIDFQVDLVELVKLSGADGLTAKEAATVITGKDKPSGAEVEKARRRLNQKVSEGMLVRLGGDRGRGSTAAWFVADQEITRKSRDSENRWSENHADFGPNGNHAEITQITLDGETAGQKITHVNHGGHAPGNHENHRPFRDGVSGTGEGR
316921..317196                     hypothetical protein; KV38_25015                                                     N/A                 MycobacteriumaviumsubsphominissuisMTDYEGDIVDTARSVNLDDVGLPGYRAATTVSTDGTVHLILARRDRLGDDNTRYDPGCSVAEHEALGALPLEYIRRLTVARRRHRNDGAGK
317193..317405                     hypothetical protein; KV38_26310                                                     N/A                 MycobacteriumaviumsubsphominissuisVTAALAGLLDAIGAAPSLPGARCRGRSSEFDETDCPETIEYALNLCRSCPALTACTAWVASLPPRKQPPGV
317463..317783                     hypothetical protein; KV38_25020                                                     N/A                 MycobacteriumaviumsubsphominissuisMTTSADGSASTAPHQTPSPPTDEQALAALQAAALGLLLAGLANDGRLATEVERMIAAGAKVTAGVLGFMTAAAANGYEYEHGSREAAIDAVSADLAAVLLTAGEKS
318176..318379                     hypothetical protein; KV38_01575                                                     N/A                 MycobacteriumaviumsubsphominissuisMKTMNLLGRKMLKAHVRPFVGNDRLIRLRIGADVFVMDRDEAIDLARQLVAAVDKANSAGEVVDGLR
318366..318812                     DNA-binding protein; KV38_01580                                                      N/A                 MycobacteriumaviumsubsphominissuisMGCDDQRELYPAIFAAVRVGLISIEAPLLRLVIHWLGDYARLKQQPGQAGVPEGLPAALTALAEAYAAVSDSRQRQEFCADAAGVVRSGYDLELGTTEAAAELGISAGGVRWHCAHGNLEHRKVGRQLMISTASIKRLKSRLDEQRGA
complement(318952..319167)         hypothetical protein; KV38_25025                                                     N/A                 MycobacteriumaviumsubsphominissuisVDVFDIGVDRQLFSWRQTRSQGRQHRPVAGAVTLHCAAPEVDPTLGDLAFVVGGDDDAAIFCAGPLLGRRYR
319267..319542                     hypothetical protein; KV38_01585                                                     N/A                 MycobacteriumaviumsubsphominissuisMRDSLGLPIPGVPAPVRLVHGRDPATWTRQERDDAVLYALGGRFAAAAAARGIPRPPGSAGYYQPSPNDVSYYDEAAQEWRPNPNYQPRGD
319545..319985                     hypothetical protein; KV38_01590                                                     N/A                 MycobacteriumaviumsubsphominissuisMPYRMKPHVELLIVKDQNGVLWHHYQNPSAATGARNLGPIIAWIGPEYLDRWLRLGLVEEISDESAAAQNRSTSAQFGGAPEPNSEFVGECIAALDRFDVPSDAGAPTCRKALRDRGLSFGNDCIAVAVRHRKTRAASLAETRAAP
320116..320388                     hypothetical protein; KV38_26315                                                     N/A                 MycobacteriumaviumsubsphominissuisMDLSTLITVTIGTTPTQIWPAGNGYEHRFLIVQNSGDTAVFVGDDSVSANGQMPALPLHPGANLTVPRRGGLCGVVESGTGTVTCLPIEA
320395..320577                     hypothetical protein; KV38_01600                                                     N/A                 MycobacteriumaviumsubsphominissuisMDNEAAQDQRFAAMATHHALDGLSDGPGQHRQDPMRSLLNQCRRARDGVDDGPSYMTMPF
complement(320811..321014)         PHAGE_Escher_phiV10_NC_007804: putative anti-immunity protein; KV38_01605; phage(gi89152443)     4.86e-09            MycobacteriumaviumsubsphominissuisMFTYDGTARIRTVTIEGKRWAVAVDICAALDIKNARDAVTRLDEADVATTDVRSGAAQQFEGCFSDA
complement(321214..321723)         hypothetical protein; KV38_01610                                                     N/A                 MycobacteriumaviumsubsphominissuisMTDWTVTIGVPDDEVTPEMMIGWEEELQGFDASVARPRDGEVTVHLHLSAPDAMKATCVAYDAVVDHVGRRPIEIETLTEAEFARRAEEPTLPELMSAAEIADELGVRRQRVHQLRHLAAFPAPLAELRGGAVWDAAAVRKFADNWTRKPGRPRSHTADSHHRDYALGN
complement(321720..321968)         PHAGE_Microb_Dismas_NC_042099: hypothetical protein; KV38_01615; phage(gi100029)     1.16e-06            MycobacteriumaviumsubsphominissuisMNSDIKKIAKWAQSQGWTVSDDTKGYTHFYDPNGDHRAYYPATPSNPYRRMKDLETDLKAAGLQIPPPSKKEQRAKRKETES
322617..326999                     PHAGE_Mycoba_Porky_NC_011055: gp22; KV38_25030; phage(gi194303318)                   1.50e-72            MycobacteriumaviumsubsphominissuisMGIGLTEFARKAGDFQQSIIKLGAAADVPVGQLKAVSDGLLKLTGQVPYSAQELADAFYDVAKAGYKGADGLKVIEVGAQLASVEGADLKEVINGLTTTVNDFHIPAEKLAETASKINVAVGDAKTNLQAFSGSLHNIEPVASIANNQMEQVYAAMARFSQSGFSMDQGTQNLAQVYRNFLGPNQQMRDAVGKLGLSMNDLQAKIADPNVGVIGVLQILSDTIRSKTAPDGQVAIDTFYKNADASNALREAYGALTGRSKEMADAINSGVVPNMRQLHQQMELDPKLAQWDTARHKVDGLSSNLRKLQGDLEPVQQLWKEVTGTAEGFNMAATLVGSPEALQATIDEWKKLQGVVAGANDPVKGFTDTNKGLNAQLKEAKDKFGAAAIEIGTAFVPAITEAAHGAKWIGDELAKHPGIAEAAAVAVGGVGAAWLAIKGYNVVSTVLSPIASGLGTLTTRLGETRAAALLFNESLAAAGPAAQAGAAGVEVAAAGEIAAENRVRDAALEADAALDAGGGGLPGGNGGGRVARSIKAGARALPFVGTAMAVQDVATSVNPNNDPTNRSDQGWGHLLLGQSWDWITGHTEGGPLHAPGPKGRDSALFWGADGEHVLTHPEVQRMGGHSAVYQFRSDLMNGRIVLGRQFGGPLGRDDGGAVSRLYQEAEALNGGPYVWGSTDCSGAVSMLVNAALGTSGRMSTATAAQWLSERGFQPGYGPPGSLQIGWYNGGPGGGHMAATLPDGTHFESGGQHGGIMLGGQAAGAESSQFTHHMYLPLQGFYPDGPAAAGGAGMPGMGFGMGTGMGGGGGIPPGARAGTGPGGQPGYYTANPQRVAAAEERLRHLDAEIDNAEKRKAELKATAKQSERDRLDEEIRHLKQERAQAQQRLTEAEQGTFHAMHGRRGAGGGSPFLPVPLADQFGLSKGLPGLAEWTVGFLEDLVLGPMETAAWAALGGRPPGGGLGGGFGPAGLGFPNPAPFGAPGASGAVGAGGDAAAGLGGPARGNEMAAARGGSAAALSTPGSWNEPYWTKKPTSPTGAPASPSGPRSAGPGIHTQNDYRLFQAGVLDADGNVISGPVGPGLSALLNPSGFSSGAGTSPMLAPGDPGLLGGGSDRGPQGLQGQPPAIVQGPASHAPSNTLLPPLYRATGGPSGTDTIPAWLSPGEQVEQKSAVDKYGSRFMTALNQGLVDPAIVQYFDEGSNGPVEPPGQQQQPSPPQQPPQMLKAPGGPGGPQQPKPPGGPQPGQPAGPKPGDVAQTPGSQQGLSDTATPGADIHQLGSDLPAQPGIGFSGGIIGGLEGAASQAAAMGADMGTFGGAGGAVSSAMNIGFQELNRAAAYGAQAAGIGVEGILEALIPNSDATGADWSKTIPGRLLMGVTGVRPAGQQNTAGQTQQPFASNAPGDQYAQPGGNTTPGAPIQILGPVHIQANDAHQMHESLNQQTNMAAATVGVQRSASQAYW
complement(327055..327294)         hypothetical protein; KV38_25035                                                     N/A                 MycobacteriumaviumsubsphominissuisMTTDQPNPRRELPKTFAGHNLIFIDDDEDEDFDDDEYDEEHTDCAFCLGREAGHRGESEDRNPYPDTDARPGSIDWYETD
complement(327342..328088)         PHAGE_Mycoba_FlagStaff_NC_028861: hypothetical protein; KV38_01630; phage(gi971750087)     1.66e-10            MycobacteriumaviumsubsphominissuisMPTNDNHDDEQQPCAAGGDETEVGPPADETELAAQVTAAAAELAWSREDSDPGDYSWGRAAERASIIVLACAAAAVVIGLLTWLGMQLHEQTKPTAAPNTARPVTIEPAAALPTVTAVQAPAAAPPATVTVTPPPPATVTVQAAPPPAPTVVKPAPAVAPPGGATVFSICPDGHEGVVGGHTSCAFAENVRRTFYASGMADTFTAFSPVTGDAYEMTCAGRYPAYFEDGSTMISTRCYGGNNAEVVIW
complement(328185..329237)         PHAGE_Mycoba_32HC_NC_023602: integrase; KV38_01635; phage(gi589893371)               1.47e-69            MycobacteriumaviumsubsphominissuisMDAWEIHMRGAGRSERTIRDGRLRIEHMERFTGKTVATMTPLDVSQFLARPTLNAWSKASYFGSIASFYRWYGVNGGVDITARLPRPKMPKSTPRPISDAQLRELLATNMRPKTRVMIMLAALAGLRVHEIAQVRGEDVDIEARTLRVTGKGNRTETLPLHPLLVEVARVMPRRGWWFMGNSKRPGQPIARRSVSEIIQMAMERAGIPGGTAHRLRHWYGTKLVADGADLRTVQGLMRHANLNTTAVYVQVVDGKRAEAIDRLTLPLSEASEPVHAEAASALERCNRSITRVLGRLEPGAQMSRTKLSQALRSDVRPHIDAAIDALSADGVLVAATTGRGRVYRLSSLPQ
complement(329288..329758)         hypothetical protein; KV38_25040                                                     N/A                 MycobacteriumaviumsubsphominissuisMRCKRFWVTPRWRQRSGIPRWLMMRSARRRPPRGTRADRERRMRPHAASGRDLIDQLPPEQVAPDGTVEPIDAAFGAIVATIGARLRCEMRTLSADTCRRDARWRVDLHGCEQVNMCGQHKSAWVREMRAQEGNPRCAHCGHEFDSLDDAVRITAI
complement(329640..330533)         PHAGE_Gordon_Twister6_NC_031052: RNA polymerase sigma factor; KV38_01640; phage(gi100049)     2.14e-82            MycobacteriumaviumsubsphominissuisMSRKGPARKPVPEAWAWAIDDYLHAIAAEGQRQATLRLRRDQLQHMARCLGCAPDEVTAERLIEWFGKQTHWSAEHRRSNRSAVRGFFSWAHKSGRVQVYLGDVLPKLPQAKMVPRPVPDDVWVYALAMADTRTALMMRLAAEAGLRRAEVAQVPTRDVFMGSGGPQLLVQGKGGRRRIVPISEDLARLIRRGAAGHTPALAAYDWGSSGWLFPDGEGCHLSAARVGAVVARALPGGYSMHSLRHRFATRAYRGSRNLLAVQTLLGHASVASTQRYTEVADDEIRAAAATAWDESRS
330913..330924                     attR                                                                                 N/A                 TCGCCCGATAAC

#### region 2 ####
1530260..1530273                   attL                                                                                 N/A                 GCCTTCACGTTGTA
1530340..1531899                   PHAGE_Mycoba_Smeadley_NC_028860: integrase; KV38_25305; phage(gi971749971)           4.66e-135           MycobacteriumaviumsubsphominissuisMDDDKDNTRKVSHLAQTEEGERWAEAHDYTIVGRFEDLGISAGKTTPFERPDLGKWLDPERLHEWDVLVFSKIDRAFRSTNDCVEFAKWTKTNRKILAFAGDGVVLDYLHPKKDSLDQMMSEFFIYVGSFFAAIELSRFKTRATDRLDYLRMTDRVSHGVPPLGYQTVPHPSGKGKALKRDPEGYKLLHEIKTKLVDENQSLTSIARWLNEEGKTTSVSKARGGGKWSVTTLKRVLTSQRTQGYRVMSVFEPAPTESNPDRKRRTGEKLVLDAEGQPIRMAEPTFSEEDWTRIQAALGDRTASGTARQMTPNPLAGIGYCVCGYSLALHRRKSSSGKLHTYVRCGRSPDGCRGAVKLADTELILEENFLDAYGDREMQRLVFVPGEDHSQELAQTEQSLERLRWESDNGLVDDDALYKSRLSALVARKAELTANTVVPARWEPVGTGKTYRELWTDEATDRRQVLRDSSIRLVLHCPPRGTTTQTKVIPWEIQVPPEWPEPTLTEEQQAIRDALGQSAL
complement(1531925..1532200)       hypothetical protein; KV38_07490                                                     N/A                 MycobacteriumaviumsubsphominissuisMTNPWSLKKSTAKVLLVVGIVIWLAAMYYIWKGTGLHDVAGQLGITAAVTYGVITTVVKMIESTNASHTESRGNKTTLYFWDDDEDKPMPS
1532837..1534122                   PROPHAGE_Xantho_306: transposase; KV38_07505; phage(gi21243165)                      8.80e-73            MycobacteriumaviumsubsphominissuisMGRSSKYPDELRERAVRMVAEVRPQYRSQWAAITAVAGMLGIGTPETLRTWIRRSDVDGGVRPGVTSQMAEENKALRKQVAELRRANEILKAAANFLRGRARPARETVIRFIAEHKDHQVPGPDGGAGLRWGVEPMCAVLSEHGVPISASTYYEWITKTPTRRQMRDAELVEIITAARKDRTTGKFVQTLGSRKLWIWLRGQGHDVARCTVERIMREQGWQGARYGSKHKTTVTDETHVRHPDLVDRRFYACAPNRLWVADFTYVSTWSGFVYVAFVIDAFSRRIVGWRAATSMTTDLVLDAIEHAFFTRAAEGNTTLRGLIAHSDAGAQYTSVAFTHRLIDEGVDPSVGSVGDALDNALAETTVGSFKNELIRRQGPWRDVNHVEIATAHWVQWFNTERPHEYLDDFTPEAVERLHYDHRRTPPKAG
1534199..1534792                   hypothetical protein; KV38_07510                                                     N/A                 MycobacteriumaviumsubsphominissuisMSDDEVIGTQLEVAHFLTDPNFGEKYHVALELYVAHLTEQQARVRFILLVIAMEALADKSPKHQVALDLLTRWKQELETEKVKYNDPSEEYYSLQALSNEIDFRGEDSIGNQIRKLFAGLPGTSDEERAELQRRAVRVYHKRSKLVHDGFLPPEELPGLEAEARELLETLFLAAIQQSKPADDRFRIEIEDPPGPRS
complement(1535728..1536522)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; KV38_07520; phage(gi557307613)     4.27e-40            MycobacteriumaviumsubsphominissuisMTTAAKPVAPSSAAPLAADLDAALRRLKLATVRRNAAEVLQVAKTQRWTPEEILRTLVEAEIAARDASNTANRLKAAAFPVTKTLDGFDVTGSSITAATFDYLSSLEWIRAQQNLAVIGPPGTGKSHLLIGCGHAAVHAGFKVRYFTAADLIEVLYRGLADNTVGKIIDTLLRADLVILDEIGFAPLDDTGTQLLFRLVAAGYERRSLAIASHWPFEQWGRFLPEHTTAASILDRLLHHASIVVTSGESYRMRHADHKKGAAKN
complement(1536519..1538099)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; KV38_07525; phage(gi557307612)     1.50e-12            MycobacteriumaviumsubsphominissuisMSFPGAEGLGGDGDSANCHLITAQGALLKSARERMNIISAYHQVGSYRGAAELCGTTHKTVKRVIERAEAGGAPPREPRPRNLDAFTDLVATRVEKSHGKMSAKRMLPIARAAGYQGSARNFRRLVAEQKVLWRNANRHQRRPAVWSPGDYLVMDWAEAAPGLMVFCAVLAYSRWRFVRFAADEKASTTLAMIAEALEAIGGVPAKILADRMGCLKGGVVANVVVPTPDYVRFASHYGFVPDFCHGADPQSKGIVENLCGYAQDDLAVPLLTEAALAGEQVDLRALNAQAQLWCAEVNATVHSEICAVPNDRLVDERTVLRELPSLRPTIGSGSVRRKVDGLSCIRYGSARYSVPQRLVGATVAVVVDHGALILLEPATGVIVAEHELVSPGEVSILDEHYDGPRPAPSRGPRPKTQAEKRFCALGTEAQQFLVGAAAIGNTRLKSELDILLGLGAAHGEQALIDALRRAVAFRRFRAADVRSILAAGAGTPQPRPAGDALVLDLPTVETRSLEAYKINTTDGTAS
1538958..1539224                   hypothetical protein; KV38_07530                                                     N/A                 MycobacteriumaviumsubsphominissuisMNIRSTKLEDWAIPEDAKQYIRDLRQENGRLRTQLKGKGMQIRPGVDVLPVKTRNELKRLRDEAGKWRRQFRAAQAELSELKAARADV
1539217..1540104                   helix-turn-helix domain-containing protein; KV38_26400                               N/A                 MycobacteriumaviumsubsphominissuisMSEFSKLTWLRESRPIIRTLTTTQRDVLDVIFDHANPDGTNAFRSQEQIAEAIGKRERQVRNVLGQLRELGLIVRTERGNRRLGKADVYALGSPAISDHRQSKVAGNDADGITGTPTLPVKPETEADYRQSADALPAISGVITGNPALPPNRPCTPDPGPIDPGIGKGEDDPRGESEHSAEFASCTQPGDYEPDPFRSDSPSGGDAHRRIADPFASLPSGSSAQGDSWGYSSGEHETSSEDAAGVRGSNFSSAESSAGSDDPEPGEPESVSRPGMSGDSRPWEDSRYGTFEQVPR
1540076..1541361                   PROPHAGE_Xantho_306: transposase; KV38_07540; phage(gi21243165)                      8.80e-73            MycobacteriumaviumsubsphominissuisMGRSSKYPDELRERAVRMVAEVRPQYRSQWAAITAVAGMLGIGTPETLRTWIRRSDVDGGVRPGVTSQMAEENKALRKQVAELRRANEILKAAANFLRGRARPARETVIRFIAEHKDHQVPGPDGGAGLRWGVEPMCAVLSEHGVPISASTYYEWITKTPTRRQMRDAELVEIITAARKDRTTGKFVQTLGSRKLWIWLRGQGHDVARCTVERIMREQGWQGARYGSKHKTTVTDETHVRHPDLVDRRFYACAPNRLWVADFTYVSTWSGFVYVAFVIDAFSRRIVGWRAATSMTTDLVLDAIEHAFFTRAAEGNTTLRGLIAHSDAGAQYTSVAFTHRLIDEGVDPSVGSVGDALDNALAETTVGSFKNELIRRQGPWRDVNHVEIATAHWVQWFNTERPHEYLDDFTPEAVERLHYDHRRTPPKAG
complement(1541571..1542383)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; KV38_07545; phage(gi557307613)     4.27e-65            MycobacteriumaviumsubsphominissuisMATKRAPAPGEADKLIAHQARLLKAPRIAAHYSRLAEQGRAAGWSLEDYLAAVLAVESNARAESGARQRIRYAGFPAIKTITDFDFTAQPHVDRAQIARLEAGGWLAEARNIVLLGPPGTGKTHLATALAIAAAQAGHRVAFAPATGWITRLAEAHRIGRLDAELRKISRIGLIVIDEVGYIPFDTEAANLFFQLVSTRYEKSSIILTSNLPFSRWGQVFGEATIASAMIDRIVHHADVIALKGASYRIKHTAIESLPSVEADRQADSTP
complement(1542383..1543600)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; KV38_07550; phage(gi557307612)     3.90e-17            MycobacteriumaviumsubsphominissuisMEDWAEIRRLHRSEKLSQAAIARRLGLSRNTVAKALDSESPPRYERAPVMTSAWAQIEPAVRAVLSEYPTMPATVIAQRVGWAGGHSWFSENVARIRSEYAPVDPCDRLVHLPGEQVQCDLWLPGRVVPDHAGVLRSFPVLVMVAAYSRFIAAVMLPSRVTGDLLAGMWLLLSQCIGAVPRTLLWDNEAGIGQRGRLAEGVAGFCGVLGTRLIQARPYDPETKGLVERANGYLRSSFLPGRQFGSPAQFNTQLADWLAQVANPRTHATTRMIPAQALGADRAAMAGLPPVAPSTGTTMTTRLGRDYYVSIGGNAYSVHPEAIGRMISVSASLDRVVARCGDRVVADHQRLWGTAGLASDPEHRAAASRMRETFRNRPAVAAHLDIEVQVADLGTYDAVFGTGEVA
1544041..1544235                   hypothetical protein; KV38_25310                                                     N/A                 MycobacteriumaviumsubsphominissuisMTFEEWLIHHEPYDAAIRADGDVPWHERPEHLARITERLGLPAGTPAIDVRRTLFNRSKKETNR
1544232..1544696                   PHAGE_Strept_phiSASD1_NC_014229: gp26; KV38_25315; phage(gi298103491)                2.25e-05            MycobacteriumaviumsubsphominissuisMTVEATTVEAVIPGAESPVDGQTIPGQGIARDGDSEAPKGNREARYRVERNEAREALAQAQARIEQFQLREVERFAGDLAQPSDLLEIGGNSLADFIREDGEVDPELVAEAVAALVEARPGLAKNPRQPAVDPSQGLGGHSGKASPTWGDLLKS
1544957..1546227                   PHAGE_Entero_BP_4795_NC_004813: putative transposase OrfB; KV38_07570; phage(gi157166063)     1.15e-67            MycobacteriumaviumsubsphominissuisMPKKYDEEFKARAVRLVSDHAEEYATRTACLTAVAKRLGVSYESLRRWINQAEVDTGVRDGAPTDTVRELRELKRKNRELEETIEILKAATKFLRAGERPATPLICAFIAEHRARFGVAPICRVLTEHGCVIAPRTFYAWLARPPSARALWDTVITEVLAGYYEPDEHGRRKPESLYGATKMWAHLQRQGITVARCTVERLMRVNGWRGVTRRKKVRTTVADPAATRAADLVKRQFRVRAPNVLLVADFTYVRLATGVFVYTAFAIDAYAGRIVGWTCSASKEDRFVRQAIRHAAQLRFNEGNPLMGNTIHHSDAGSQYTSVRFGETLTLSGLVASIGTVGDAFDNALAETTIGLYKTEAVRADSPFRRGPLQRLTDVELLTADWVHWYNTSRLMHRLGRIPPTEYETIYYATNTAQSEAAHP
1546429..1547250                   phage major capsid protein; KV38_07575                                               N/A                 MycobacteriumaviumsubsphominissuisMSMKRADQAQSWLPEDFGKMLDLVVQAKSVAALASTLFPTNKQKVAFPLWVADPAVGWYNELDEITAADGDTDEVEVTPSKTAGLTLVSNELADDSDPAVANQIASALANQIAHAIDAAYFANTTAKGPNGLLSLASTAVDPGTSVANLDAFVSARYAAEAHGAKLTHWLLSPAVAETLSKLKIQSGSNQSLIQFVEDGITVAGLPVITSTHVDADTVAWGVDKTQQRYVLRSGTTVERFDSVTNDGLYIRAISRIGVGFLNPAGVVRLYHAS
complement(1547360..1547704)       hypothetical protein; KV38_26405                                                     N/A                 MycobacteriumaviumsubsphominissuisMSSSVMLAASLICGLIAAAIGHSKNRGILGSFLLGALLNVIGIVVVAMLPSGVPKAPPGLRAVRCQNCNAVQNIPEADTTFECWQCKRVNAAPDTRRRGPEDTREWLNRVKKRP
1548195..1548419                   PHAGE_Mycoba_Bernal13_NC_024135: terminase small subunit; KV38_25320; phage(gi640883689)     5.35e-06            MycobacteriumaviumsubsphominissuisMAGFLWVGKLRPCSGPIEENMRKPTGLGTAGSKLWRTVTDTFDFEDEPAKVHILEQACRVADIVAVTALTEIPH
1548528..1549889                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; KV38_07585; phage(gi557307612)     1.46e-22            MycobacteriumaviumsubsphominissuisMLTWEDDVEVHALRKRGWTISAIARHTGFDRKTVRKYLAGDGKPGVRARPDPDPFDPYVDYVTARLTEDPHLWARTLYDELEDLGFVLSYQSLTRNIRIRGLRPVCEACRTATQRPNAVIPHAPGDETQWDWLDLPDPPASWGWGKAAHLLVGSLSHSGKWRGYLAPSEDQPHLVAGLDRVTRGLGGCTRVWRFDRMATVCDPGSGRVTASFAGVAKHYGVSVAICPARRGNRKGVVEKVNHTAAQRWWRTLADDLTVEQAQASLDRFARVRGDTRLRSTADGRSSVAVVAKTEPLQPVPAQAYPVIVAEIRTASRQAMVSYRGNRYSVPPELAAANVVVSHPVGGQFCDIATMSGIVIARHRLAADGLGVMVRDSGHVIALDAVAMATAATGRPHRRKERIPPGPAAKAAAAQLLALKQPSNTSSETSTPSTDSTVIDLSAYERAAQNRTIQ
1549886..1550737                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; KV38_07590; phage(gi557307613)     4.85e-53            MycobacteriumaviumsubsphominissuisMTPTPRTNKAPTRTEESPSAAASRYQQLRSHLAELKLAAAAEALPAVLDQATAEGLSLTVALERLLAVEVEASTARRLAGRLRFACLPTPATLADFDVDAAAGIDRKLIDELGTCRYLETATNILLIGPPGTGKTHLSVGLARAAAHTGYRTYFTTAADLAARCHRAAIEGRWATTMRFYAGPTLLVIDELGYLPLPAEAASALFQVVSQRYLKTSIVITTNRGVGAWGEILGDTTVAAAMLDRLLHRSVVINLDGESYRLRDHHDAAETLRRTTTGTRQPLH
1552382..1552395                   attR                                                                                 N/A                 GCCTTCACGTTGTA

#### region 3 ####
2789753..2789764                   attL                                                                                 N/A                 GCCGGGCTGCTC
complement(2801141..2802303)       PROPHAGE_Xantho_33913: ISxac3 transposase; KV38_13100; phage(gi21231086)             5.93e-43            MycobacteriumaviumsubsphominissuisMARPYPREFRDDVVRVARNRDDGVTIEQIATDFGVHPMTLQKWLRQADIDEGTKPGKSASESGELREARRRIKLLEQENEVLRRAAAYLSQANLPKRVYPLVKELAADGIPVAVTCRVLKLSRQPYYRWLADPITEAELIEAYRANALFDAHADDPEFGYRYLVEEARDAGEPMAERTAWRICSQNRLWSVFGKKRGKNGKVGPPVHDDLVERDFTAEGPNQLWLSDITEHRTGEGKLYLCAIKDVFSNRIVGYSIDSRMKSQLAIRALHSAVARRGDVAGCILHSDRGSQFRSRKFVHALNQHEMVGSMGRVGAAGDNAAMESFFSLLQKNVLDRRRWDTREQLRIAIVTWIERTYHRRRRQSGLGRLTPIEFEAIMTTPASQAA
complement(2802468..2803319)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; KV38_13110; phage(gi557307613)     4.85e-53            MycobacteriumaviumsubsphominissuisMTPTPRTNKAPTRTEESPSAAASRYQQLRSHLAELKLAAAAEALPAVLDQATAEGLSLTVALERLLAVEVEASTARRLAGRLRFACLPTPATLADFDVDAAAGIDRKLIDELGTCRYLETATNILLIGPPGTGKTHLSVGLARAAAHTGYRTYFTTAADLAARCHRAAIEGRWATTMRFYAGPTLLVIDELGYLPLPAEAASALFQVVSQRYLKTSIVITTNRGVGAWGEILGDTTVAAAMLDRLLHRSVVINLDGESYRLRDHHDAAETLRRTTTGTRQPLH
complement(2803316..2804677)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; KV38_13115; phage(gi557307612)     1.46e-22            MycobacteriumaviumsubsphominissuisMLTWEDDVEVHALRKRGWTISAIARHTGFDRKTVRKYLAGDGKPGVRARPDPDPFDPYVDYVTARLTEDPHLWARTLYDELEDLGFVLSYQSLTRNIRIRGLRPVCEACRTATQRPNAVIPHAPGDETQWDWLDLPDPPASWGWGKAAHLLVGSLSHSGKWRGYLAPSEDQPHLVAGLDRVTRGLGGCTRVWRFDRMATVCDPGSGRVTASFAGVAKHYGVSVAICPARRGNRKGVVEKVNHTAAQRWWRTLADDLTVEQAQASLDRFARVRGDTRLRSTADGRSSVAVVAKTEPLQPVPAQAYPVIVAEIRTASRQAMVSYRGNRYSVPPELAAANVVVSHPVGGQFCDIATMSGIVIARHRLAADGLGVMVRDSGHVIALDAVAMATAATGRPHRRKERIPPGPAAKAAAAQLLALKQPSNTSSETSTPSTDSTVIDLSAYERAAQNRTIQ
2804802..2805035                   hypothetical protein; KV38_25610                                                     N/A                 MycobacteriumaviumsubsphominissuisVSAVKADRSADDDGDDTDFWLALPGFRDSLIAAEADHGAGRTFSEEEIYAYVGLPQRDTDQEELRRRCMAHGKWMSDH
2805087..2806372                   PROPHAGE_Xantho_306: transposase; KV38_13125; phage(gi21243165)                      8.80e-73            MycobacteriumaviumsubsphominissuisMGRSSKYPDELRERAVRMVAEVRPQYRSQWAAITAVAGMLGIGTPETLRTWIRRSDVDGGVRPGVTSQMAEENKALRKQVAELRRANEILKAAANFLRGRARPARETVIRFIAEHKDHQVPGPDGGAGLRWGVEPMCAVLSEHGVPISASTYYEWITKTPTRRQMRDAELVEIITAARKDRTTGKFVQTLGSRKLWIWLRGQGHDVARCTVERIMREQGWQGARYGSKHKTTVTDETHVRHPDLVDRRFYACAPNRLWVADFTYVSTWSGFVYVAFVIDAFSRRIVGWRAATSMTTDLVLDAIEHAFFTRAAEGNTTLRGLIAHSDAGAQYTSVAFTHRLIDEGVDPSVGSVGDALDNALAETTVGSFKNELIRRQGPWRDVNHVEIATAHWVQWFNTERPHEYLDDFTPEAVERLHYDHRRTPPKAG
2807242..2808512                   PHAGE_Entero_BP_4795_NC_004813: putative transposase OrfB; KV38_13135; phage(gi157166063)     1.15e-67            MycobacteriumaviumsubsphominissuisMPKKYDEEFKARAVRLVSDHAEEYATRTACLTAVAKRLGVSYESLRRWINQAEVDTGVRDGAPTDTVRELRELKRKNRELEETIEILKAATKFLRAGERPATPLICAFIAEHRARFGVAPICRVLTEHGCVIAPRTFYAWLARPPSARALWDTVITEVLAGYYEPDEHGRRKPESLYGATKMWAHLQRQGITVARCTVERLMRVNGWRGVTRRKKVRTTVADPAATRAADLVKRQFRVRAPNVLLVADFTYVRLATGVFVYTAFAIDAYAGRIVGWTCSASKEDRFVRQAIRHAAQLRFNEGNPLMGNTIHHSDAGSQYTSVRFGETLTLSGLVASIGTVGDAFDNALAETTIGLYKTEAVRADSPFRRGPLQRLTDVELLTADWVHWYNTSRLMHRLGRIPPTEYETIYYATNTAQSEAAHP
2808519..2808701                   hypothetical protein; KV38_25615                                                     N/A                 MycobacteriumaviumsubsphominissuisMHRTRGGSTIGGSNFGCDANYTGPGPTEFSLFAKVIGPAGVKGQISSHTPESFGEAGASR
2808698..2808895                   hypothetical protein; KV38_25620                                                     N/A                 MycobacteriumaviumsubsphominissuisMIERDGFEKPNQFGYFPDGYHIQIKAAYPPDYPPTIVATSPCFPGDLRRDGLPVPKVIQQGSPGS
2809021..2810328                   PROPHAGE_Escher_MG1655: protease, ATP-dependent zinc-metallo; KV38_13140; phage(gi16131068)     3.96e-17            MycobacteriumaviumsubsphominissuisMSDVEPSALAAVLAGEDSSVRRAVQLVGQILTGSVTTQVTLAGFLHAMLGRSGSDLVCESRRLSSIGHVAAGLALAALIDRFDPPIGPSDDDEPPTWAHIEIGDKHLAPPARLSAFFTAGQLAPAPVVVRLSSSTLYSDTPRLQVYTTPADRGHAVAVIEAIMTDADGAKNLYRGRALTASENNGLVLEVTDIPTLSRTNVVVPESVWEEIDLNIAALTTHRQLMTQLGLGVRRGILLAGPPGVGKTAISQTIAAELVGPFTVINVDARAGKSVLSAVYKEARALGPTVIVLEDIDLIVGNRRHHGEVRPLSEFLAVMDTDPSAPILTLASTNDVAALDAAAIRTARFDSIIEIGYPTSEAAAQILTTYLRGIPGAESIDASQVAAHFNAETNGADIREIVRRTVLATGTVSDTALLATIRSGRFKPELPQGNYL
complement(2810797..2811075)       PHAGE_Strept_PH15_NC_010945: putative transcriptional repressor; KV38_25625; phage(gi190151419)     1.21e-06            MycobacteriumaviumsubsphominissuisMPTRPSQNSPERVAQWERWRSVVGHNIRELRIQQGMTQEALALRSGVTRNVLIDVEHGRRGLLYERLFDIAEALQVPVNELLVARARRRNKR
complement(2811638..2811931)       hypothetical protein; KV38_25630                                                     N/A                 MycobacteriumaviumsubsphominissuisMSGSKRGRRSGSERRRLTETVVVRLAPAEKKILEEAAARMGISIVRLVRESINGHIREPVLATGERNGPPNIKKSERGSATADSAYAEEVVVPLGQD
complement(2811997..2812128)       peptidase; KV38_25635                                                                N/A                 MycobacteriumaviumsubsphominissuisMLTHWGSRRPAQRGPSALPTVGDASFPVLETLPEKAANRSAPY
2813296..2813730                   septation ring formation regulator EzrA; KV38_13150                                  N/A                 MycobacteriumaviumsubsphominissuisMETLARLFLSSDYQCKTLLQSLVHRHASGDIGDELRSAMEQFAASVDLHRVLSEDPSYRQARDEIETLRKRLRLDVDAADQRDQELARLRRESEELRRLRIRVAELESVVASAAYPLHQAGQHDVMLSRQQRRAVERAARKGRY
2813935..2814144                   DNA-binding protein; KV38_25645                                                      N/A                 MycobacteriumaviumsubsphominissuisMALLDGHWYSSAELAELLHVDASTIRRWRTSHPPKGPAFVRVSDRVYMYNSNDVEAWLSSRHVDPGEVA
2814208..2814219                   attR                                                                                 N/A                 GCCGGGCTGCTC
2814324..2815349                   PHAGE_Gordon_Attis_NC_041883: membrane-associated initiation of head vertex; KV38_13155; phage(gi100034)     1.50e-15            MycobacteriumaviumsubsphominissuisMERAAAHGVDPKTATTTLAEYGTTNMALALRGLESKTTDPYLAGWRKRVVPTLGHLPIAMVTNGAVDRAVHAWIADECSRSTVKNSLAVLVRIMEQALRDGIIDRNPARVSGWQRQYKLAEDELDDPRALALPNWTALTTLADALVARSAGRYRGWGDAVIFEACTAARIGEVAGCLVRDINTHEWIWTVRRQTTPSPGGLVDKNTKGKRAREVPLIPAVRELVQRRMDVVASNPDARLFVGPRGGRITTATLRDATSWDAVVTQLGYEKLTRHGLRHTGLTWMADAGVPVHILRKIAGHGALTTTQRYLHPDRQSVIKAGDLLERHLWSPNGPQLRVISS

#### region 4 ####
complement(3078486..3079771)       PROPHAGE_Xantho_306: transposase; KV38_14070; phage(gi21243165)                      8.80e-73            MycobacteriumaviumsubsphominissuisMGRSSKYPDELRERAVRMVAEVRPQYRSQWAAITAVAGMLGIGTPETLRTWIRRSDVDGGVRPGVTSQMAEENKALRKQVAELRRANEILKAAANFLRGRARPARETVIRFIAEHKDHQVPGPDGGAGLRWGVEPMCAVLSEHGVPISASTYYEWITKTPTRRQMRDAELVEIITAARKDRTTGKFVQTLGSRKLWIWLRGQGHDVARCTVERIMREQGWQGARYGSKHKTTVTDETHVRHPDLVDRRFYACAPNRLWVADFTYVSTWSGFVYVAFVIDAFSRRIVGWRAATSMTTDLVLDAIEHAFFTRAAEGNTTLRGLIAHSDAGAQYTSVAFTHRLIDEGVDPSVGSVGDALDNALAETTVGSFKNELIRRQGPWRDVNHVEIATAHWVQWFNTERPHEYLDDFTPEAVERLHYDHRRTPPKAG
complement(3079841..3080131)       IS1634 family transposase; KV38_14080                                                N/A                 MycobacteriumaviumsubsphominissuisVAYVRTVKTSSGAMAVQVVWSSRRGSRRIEHLGSAHDEAGVAALKAAAAQRLAAGQAQLDLGLAERSAAEPLPITSSKSALLWEALCAAYDKVGFAN
complement(3080487..3080705)       glycosyl transferase; KV38_25670                                                     N/A                 MycobacteriumaviumsubsphominissuisIVVARYNDMTGLSMRESTDREFRKRLPMYFWVAAWETGRRMMGFFKQRENRRLALRAFVIRTRAASHARARR
complement(3080739..3081904)       PHAGE_Shigel_SfIV_NC_022749: ISEhe3 orfB; KV38_14090; phage(gi557307549)             8.63e-36            MycobacteriumaviumsubsphominissuisMPRPYPREFRDDVVRVARNRDDGVTIEQIATDFGVHPMTLTKWMRQADIDEGTKPGKSTSDSAELRELRRRNRLLEQENEVLRRAAAYLSQANLPKRLYPLVKELAADGIPVAVTCRVLKLARQPYYRWLADPITEAEYVEAHRANALFEAHRDDPEFGYRFLVDEARDAGQSMAERTAWRICSNNGWWSAFGKRQRGKNGKPGPPVHDDLVGRDFTADTPNQLWLADITEHRTGEGKLYLCAIKDEFSNRIVGYSIDSRMKSQLATQALNSAVARRGEVAGCILHTDRGSQFRSRKFVRALSRHDMVGSMGRVGAAGDNAAMESFFSLLQKNVLNRRRWDTREQLRIAIVTWIERTYHRRRRQLALGRLTPIEFEAIMTTPASQAA
complement(3081957..3082556)       PHAGE_Staphy_phiN315_NC_004740: probable ss-1,3-N-acetylglucosaminyltransferase; KV38_25675; phage(gi30043988)     1.30e-07            MycobacteriumaviumsubsphominissuisMPAPMFSIIVPTYNAAATLQMCLESIICQTNSDLELVLVDGGSTDATLGIAQAFAGKLGPRFVVHSGPDQGPYDAMNRGVGMATGEWLLFLGADDALDQPDTLARVAAFIDEHETCDLVYGDVVMRSTGTRHAGPFDLDRLLFETNMCHQSIFYRRKLFEGIGPYNLRYPIWADWDFNIRCFSNPALVTCYMDMGLLHG
complement(3082616..3083323)       PHAGE_Prochl_P_SSM2_NC_006883: hypothetical protein; KV38_14105; phage(gi61806138)     1.89e-11            MycobacteriumaviumsubsphominissuisMIARNIPSEALRYLSERHWKRHFVKQLAAHQVTVVFDVGANTGQYTEGLRKAGYQGRIISFEPLSQPFSRLENRAAKDALWNCSRYAIGDFDGTIRVHVAGNAGQSSSVLPMLKSHQDAYPPANYVGVEEVPIHRLDSVAPQMLHSTDVSFLKIDVQGFEKQVLEGSKETIENRCAGLQLELSFLPLYEGSMLIPEALELVYSLGFTLTGLLPCFTDPRDGKMLQADGIFFREDN
complement(3083493..3084455)       PHAGE_Synech_S_CAM7_NC_031927: minor capsid protein inhibitor of protease; KV38_14110; phage(gi100226)     3.41e-98            MycobacteriumaviumsubsphominissuisMDTPLGVLDRTLPVYIAGHRGLVGSALVRKFQGEGFTNLLLQTHSELDLTDRAATFDFVVESRPQVVIDAAARVGGIMANNTYPVDFLSENLRMQVNLLDAAVAARVPRLLFLGSSCIYPKFAPQPIKESALLTGALESTNDSYAIAKIAGILQVQAVRRQYGLAWISAMPTNLYGPNDNFSEAGSHLLPALIRRYEEARRSGRPEVTNWGTGNPRRELLHVDDLASACLYLLEHYDEPTHVNIGTGIDHTIREIAEMVASAVGYAGETHWDTTKPDGTPRKLLDISVLRQAGWEPRIGLRDGIESTVAWYRENAGAVRQ
complement(3084464..3085486)       PHAGE_Synech_S_SKS1_NC_020851: GDP-D-mannose 4,6-dehydratase; KV38_14115; phage(gi472340900)     1.14e-131           MycobacteriumaviumsubsphominissuisMKRALITGITGQDGSYLAEFLLSKGYEVHGLIRRASTFNTSRIDHLYVDPHQPDARLFLHYGDLTDGTRLVTLLSTIDPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSIRLLEAVRLARVECRFYQASSSEMFGASPPPQNEQTPFYPRSPYGAAKVYSYWATRNYREAYGMFAVNGILFNHESPRRGETFVTRKITRAVARIKAGVQSDVYLGNLDAVRDWGYAPEYVEGMWRMLQSPDPDDFVLATGRGYTVREFAQAAFEHAGLDWQKHVKFDDRYLRPTEVDSLIGDATKAAESLGWKATVHTGELARIMVDADVAALECDGKPWIDTPTSPGWG
