gi|00000000|ref|CP009360.4|  Mycobacterium avium subsp. hominissuis strain OCU464 chromosome, 5178488, gc%: 69.04%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
313310..313321                     attL                                                                                 N/A                 TCGCCCGATAAC
313330..314232                     PHAGE_Mycoba_Pumpkin_NC_042027: tail tip protein; KV38_01555; phage(gi100054)        3.30e-41            MycobacteriumaviumsubsphominissuisMTEYLESLRGSFNRSLRVEGKADRTLVLYGQSITYFSDWLRTRGQPADLSSLDRDTVLQWLDHLRRRGLTTGTIRTRWRGLRRFVNWLLAEDIIRTDPLAGIVIDKPEPAPVPVLADEELAALIGACKGKKFVDRRDEAVIRLLIDCGLRVSELTGIDLEHLDLDAESVVVTGKGSRVRPAYFGARTGQALDRYLRERRNHRHASNSALFLGERGRFTPDGVRERLKVRADMAGLDSTKIHPHRFRHTNAHDFLLAGGQERDLKRLMGWRSDTMLERYGASAADHRAREAARRLKRGDRV
315716..317074                     PHAGE_Mycoba_Redno2_NC_022066: DNA helicase; KV38_25010; phage(gi530546711)          1.88e-91            MycobacteriumaviumsubsphominissuisMNVDDELVARGKALGESGKYRPTSQSLGQGDGQPATELALVEHPDAADAPSVGTNTDPDNAIDGAMFILDQPEGIPTIWGRGTQVLWPKGEALMIAGGQGLGKTTLAGQVTAGLLGVGERSVLGLPVTDMGCKVLYLAMDRPRQIARSLRRQFGPEDRDILSERLVVWEGPPPRDLAANPTLLAKMAKYYQAGVVVVDSLKDAAVRLAEDSVGAQWNRARQHLLSQGCQLLELHHSTKRGPAGAPITGVADVYGSTWLTSGCGSIILLVGEPGDPIVSFRHVKQPAEEVGPYQLLHDQSAGHLSIDFQVDLVELVKLSGADGLTAKEAATVITGKDKPSGAEVEKARRRLNQKVSEGMLVRLGGDRGRGSTAAWFVADQEITRKSRDSENRWSENHADFGPNGNHAEITQITLDGETAGQKITHVNHGGHAPGNHENHRPFRDGVSGTGEGR
317071..317346                     hypothetical protein; KV38_25015                                                     N/A                 MycobacteriumaviumsubsphominissuisMTDYEGDIVDTARSVNLDDVGLPGYRAATTVSTDGTVHLILARRDRLGDDNTRYDPGCSVAEHEALGALPLEYIRRLTVARRRHRNDGAGK
317613..317933                     hypothetical protein; KV38_25020                                                     N/A                 MycobacteriumaviumsubsphominissuisMTTSADGSASTAPHQTPSPPTDEQALAALQAAALGLLLAGLANDGRLATEVERMIAAGAKVTAGVLGFMTAAAANGYEYEHGSREAAIDAVSADLAAVLLTAGEKS
318326..318529                     hypothetical protein; KV38_01575                                                     N/A                 MycobacteriumaviumsubsphominissuisMKTMNLLGRKMLKAHVRPFVGNDRLIRLRIGADVFVMDRDEAIDLARQLVAAVDKANSAGEVVDGLR
318516..318962                     helix-turn-helix domain-containing protein; KV38_01580                               N/A                 MycobacteriumaviumsubsphominissuisMGCDDQRELYPAIFAAVRVGLISIEAPLLRLVIHWLGDYARLKQQPGQAGVPEGLPAALTALAEAYAAVSDSRQRQEFCADAAGVVRSGYDLELGTTEAAAELGISAGGVRWHCAHGNLEHRKVGRQLMISTASIKRLKSRLDEQRGA
318964..319692                     hypothetical protein; KV38_26640                                                     N/A                 MycobacteriumaviumsubsphominissuisMADKIVRVPRAEIVRLLGLSPDVDDVTLQREMDSALARIRTDKAAAAVSAAEQRARAEDRRIVIAAYNEGKITQSRIDFWCSAMQRDRAGNRAVLASLAPGLPPAEKLPVDPDVEHVHGKVLTRLGIAPRPATARPQAVTASSQPPSPNSTMRDSLGLPIPGVPAPVRLVHGRDPATWTRQERDDAVLYALGGRFAAAAAARGIPRPPGSAGYYQPSPNDVSYYDEAAQEWRPNPNYQPRGD
319695..320135                     hypothetical protein; KV38_01590                                                     N/A                 MycobacteriumaviumsubsphominissuisMPYRMKPHVELLIVKDQNGVLWHHYQNPSAATGARNLGPIIAWIGPEYLDRWLRLGLVEEISDESAAAQNRSTSAQFGGAPEPNSEFVGECIAALDRFDVPSDAGAPTCRKALRDRGLSFGNDCIAVAVRHRKTRAASLAETRAAP
320266..320538                     hypothetical protein; KV38_26315                                                     N/A                 MycobacteriumaviumsubsphominissuisMDLSTLITVTIGTTPTQIWPAGNGYEHRFLIVQNSGDTAVFVGDDSVSANGQMPALPLHPGANLTVPRRGGLCGVVESGTGTVTCLPIEA
320545..320727                     hypothetical protein; KV38_01600                                                     N/A                 MycobacteriumaviumsubsphominissuisMDNEAAQDQRFAAMATHHALDGLSDGPGQHRQDPMRSLLNQCRRARDGVDDGPSYMTMPF
complement(320961..321164)         PHAGE_Escher_phiV10_NC_007804: putative anti-immunity protein; KV38_01605; phage(gi89152443)     6.72e-09            MycobacteriumaviumsubsphominissuisMFTYDGTARIRTVTIEGKRWAVAVDICAALDIKNARDAVTRLDEADVATTDVRSGAAQQFEGCFSDA
complement(321364..321873)         hypothetical protein; KV38_01610                                                     N/A                 MycobacteriumaviumsubsphominissuisMTDWTVTIGVPDDEVTPEMMIGWEEELQGFDASVARPRDGEVTVHLHLSAPDAMKATCVAYDAVVDHVGRRPIEIETLTEAEFARRAEEPTLPELMSAAEIADELGVRRQRVHQLRHLAAFPAPLAELRGGAVWDAAAVRKFADNWTRKPGRPRSHTADSHHRDYALGN
complement(321870..322118)         PHAGE_Microb_Dismas_NC_042099: hypothetical protein; KV38_01615; phage(gi100029)     1.60e-06            MycobacteriumaviumsubsphominissuisMNSDIKKIAKWAQSQGWTVSDDTKGYTHFYDPNGDHRAYYPATPSNPYRRMKDLETDLKAAGLQIPPPSKKEQRAKRKETES
322767..327149                     PHAGE_Mycoba_Porky_NC_011055: gp22; KV38_25030; phage(gi194303318)                   2.07e-72            MycobacteriumaviumsubsphominissuisMGIGLTEFARKAGDFQQSIIKLGAAADVPVGQLKAVSDGLLKLTGQVPYSAQELADAFYDVAKAGYKGADGLKVIEVGAQLASVEGADLKEVINGLTTTVNDFHIPAEKLAETASKINVAVGDAKTNLQAFSGSLHNIEPVASIANNQMEQVYAAMARFSQSGFSMDQGTQNLAQVYRNFLGPNQQMRDAVGKLGLSMNDLQAKIADPNVGVIGVLQILSDTIRSKTAPDGQVAIDTFYKNADASNALREAYGALTGRSKEMADAINSGVVPNMRQLHQQMELDPKLAQWDTARHKVDGLSSNLRKLQGDLEPVQQLWKEVTGTAEGFNMAATLVGSPEALQATIDEWKKLQGVVAGANDPVKGFTDTNKGLNAQLKEAKDKFGAAAIEIGTAFVPAITEAAHGAKWIGDELAKHPGIAEAAAVAVGGVGAAWLAIKGYNVVSTVLSPIASGLGTLTTRLGETRAAALLFNESLAAAGPAAQAGAAGVEVAAAGEIAAENRVRDAALEADAALDAGGGGLPGGNGGGRVARSIKAGARALPFVGTAMAVQDVATSVNPNNDPTNRSDQGWGHLLLGQSWDWITGHTEGGPLHAPGPKGRDSALFWGADGEHVLTHPEVQRMGGHSAVYQFRSDLMNGRIVLGRQFGGPLGRDDGGAVSRLYQEAEALNGGPYVWGSTDCSGAVSMLVNAALGTSGRMSTATAAQWLSERGFQPGYGPPGSLQIGWYNGGPGGGHMAATLPDGTHFESGGQHGGIMLGGQAAGAESSQFTHHMYLPLQGFYPDGPAAAGGAGMPGMGFGMGTGMGGGGGIPPGARAGTGPGGQPGYYTANPQRVAAAEERLRHLDAEIDNAEKRKAELKATAKQSERDRLDEEIRHLKQERAQAQQRLTEAEQGTFHAMHGRRGAGGGSPFLPVPLADQFGLSKGLPGLAEWTVGFLEDLVLGPMETAAWAALGGRPPGGGLGGGFGPAGLGFPNPAPFGAPGASGAVGAGGDAAAGLGGPARGNEMAAARGGSAAALSTPGSWNEPYWTKKPTSPTGAPASPSGPRSAGPGIHTQNDYRLFQAGVLDADGNVISGPVGPGLSALLNPSGFSSGAGTSPMLAPGDPGLLGGGSDRGPQGLQGQPPAIVQGPASHAPSNTLLPPLYRATGGPSGTDTIPAWLSPGEQVEQKSAVDKYGSRFMTALNQGLVDPAIVQYFDEGSNGPVEPPGQQQQPSPPQQPPQMLKAPGGPGGPQQPKPPGGPQPGQPAGPKPGDVAQTPGSQQGLSDTATPGADIHQLGSDLPAQPGIGFSGGIIGGLEGAASQAAAMGADMGTFGGAGGAVSSAMNIGFQELNRAAAYGAQAAGIGVEGILEALIPNSDATGADWSKTIPGRLLMGVTGVRPAGQQNTAGQTQQPFASNAPGDQYAQPGGNTTPGAPIQILGPVHIQANDAHQMHESLNQQTNMAAATVGVQRSASQAYW
327283..327468                     hypothetical protein; KV38_26645                                                     N/A                 MycobacteriumaviumsubsphominissuisMTSFTAKAEGAIGVLLVVLVVVEILVLVVIDENEVVSGEGLGELPPRIGLIGGHSWSLSGR
complement(327492..328238)         PHAGE_Mycoba_FlagStaff_NC_028861: hypothetical protein; KV38_01630; phage(gi971750087)     2.29e-10            MycobacteriumaviumsubsphominissuisMPTNDNHDDEQQPCAAGGDETEVGPPADETELAAQVTAAAAELAWSREDSDPGDYSWGRAAERASIIVLACAAAAVVIGLLTWLGMQLHEQTKPTAAPNTARPVTIEPAAALPTVTAVQAPAAAPPATVTVTPPPPATVTVQAAPPPAPTVVKPAPAVAPPGGATVFSICPDGHEGVVGGHTSCAFAENVRRTFYASGMADTFTAFSPVTGDAYEMTCAGRYPAYFEDGSTMISTRCYGGNNAEVVIW
complement(328335..329387)         PHAGE_Mycoba_32HC_NC_023602: integrase; KV38_01635; phage(gi589893371)               2.04e-69            MycobacteriumaviumsubsphominissuisMDAWEIHMRGAGRSERTIRDGRLRIEHMERFTGKTVATMTPLDVSQFLARPTLNAWSKASYFGSIASFYRWYGVNGGVDITARLPRPKMPKSTPRPISDAQLRELLATNMRPKTRVMIMLAALAGLRVHEIAQVRGEDVDIEARTLRVTGKGNRTETLPLHPLLVEVARVMPRRGWWFMGNSKRPGQPIARRSVSEIIQMAMERAGIPGGTAHRLRHWYGTKLVADGADLRTVQGLMRHANLNTTAVYVQVVDGKRAEAIDRLTLPLSEASEPVHAEAASALERCNRSITRVLGRLEPGAQMSRTKLSQALRSDVRPHIDAAIDALSADGVLVAATTGRGRVYRLSSLPQ
complement(329438..329908)         hypothetical protein; KV38_25040                                                     N/A                 MycobacteriumaviumsubsphominissuisMRCKRFWVTPRWRQRSGIPRWLMMRSARRRPPRGTRADRERRMRPHAASGRDLIDQLPPEQVAPDGTVEPIDAAFGAIVATIGARLRCEMRTLSADTCRRDARWRVDLHGCEQVNMCGQHKSAWVREMRAQEGNPRCAHCGHEFDSLDDAVRITAI
complement(329790..330683)         PHAGE_Gordon_Twister6_NC_031052: recombination protein; KV38_01640; phage(gi100049)     2.96e-82            MycobacteriumaviumsubsphominissuisMSRKGPARKPVPEAWAWAIDDYLHAIAAEGQRQATLRLRRDQLQHMARCLGCAPDEVTAERLIEWFGKQTHWSAEHRRSNRSAVRGFFSWAHKSGRVQVYLGDVLPKLPQAKMVPRPVPDDVWVYALAMADTRTALMMRLAAEAGLRRAEVAQVPTRDVFMGSGGPQLLVQGKGGRRRIVPISEDLARLIRRGAAGHTPALAAYDWGSSGWLFPDGEGCHLSAARVGAVVARALPGGYSMHSLRHRFATRAYRGSRNLLAVQTLLGHASVASTQRYTEVADDEIRAAAATAWDESRS
331063..331074                     attR                                                                                 N/A                 TCGCCCGATAAC

#### region 2 ####
1530407..1530420                   attL                                                                                 N/A                 GCCTTCACGTTGTA
1530487..1532046                   PHAGE_Mycoba_Smeadley_NC_028860: integrase; KV38_25305; phage(gi971749971)           6.45e-135           MycobacteriumaviumsubsphominissuisMDDDKDNTRKVSHLAQTEEGERWAEAHDYTIVGRFEDLGISAGKTTPFERPDLGKWLDPERLHEWDVLVFSKIDRAFRSTNDCVEFAKWTKTNRKILAFAGDGVVLDYLHPKKDSLDQMMSEFFIYVGSFFAAIELSRFKTRATDRLDYLRMTDRVSHGVPPLGYQTVPHPSGKGKALKRDPEGYKLLHEIKTKLVDENQSLTSIARWLNEEGKTTSVSKARGGGKWSVTTLKRVLTSQRTQGYRVMSVFEPAPTESNPDRKRRTGEKLVLDAEGQPIRMAEPTFSEEDWTRIQAALGDRTASGTARQMTPNPLAGIGYCVCGYSLALHRRKSSSGKLHTYVRCGRSPDGCRGAVKLADTELILEENFLDAYGDREMQRLVFVPGEDHSQELAQTEQSLERLRWESDNGLVDDDALYKSRLSALVARKAELTANTVVPARWEPVGTGKTYRELWTDEATDRRQVLRDSSIRLVLHCPPRGTTTQTKVIPWEIQVPPEWPEPTLTEEQQAIRDALGQSAL
complement(1532072..1532347)       hypothetical protein; KV38_07490                                                     N/A                 MycobacteriumaviumsubsphominissuisMTNPWSLKKSTAKVLLVVGIVIWLAAMYYIWKGTGLHDVAGQLGITAAVTYGVITTVVKMIESTNASHTESRGNKTTLYFWDDDEDKPMPS
1532984..1534269                   PROPHAGE_Xantho_306: transposase; KV38_07505; phage(gi21243165)                      1.22e-72            MycobacteriumaviumsubsphominissuisMGRSSKYPDELRERAVRMVAEVRPQYRSQWAAITAVAGMLGIGTPETLRTWIRRSDVDGGVRPGVTSQMAEENKALRKQVAELRRANEILKAAANFLRGRARPARETVIRFIAEHKDHQVPGPDGGAGLRWGVEPMCAVLSEHGVPISASTYYEWITKTPTRRQMRDAELVEIITAARKDRTTGKFVQTLGSRKLWIWLRGQGHDVARCTVERIMREQGWQGARYGSKHKTTVTDETHVRHPDLVDRRFYACAPNRLWVADFTYVSTWSGFVYVAFVIDAFSRRIVGWRAATSMTTDLVLDAIEHAFFTRAAEGNTTLRGLIAHSDAGAQYTSVAFTHRLIDEGVDPSVGSVGDALDNALAETTVGSFKNELIRRQGPWRDVNHVEIATAHWVQWFNTERPHEYLDDFTPEAVERLHYDHRRTPPKAG
1534346..1534939                   hypothetical protein; KV38_07510                                                     N/A                 MycobacteriumaviumsubsphominissuisMSDDEVIGTQLEVAHFLTDPNFGEKYHVALELYVAHLTEQQARVRFILLVIAMEALADKSPKHQVALDLLTRWKQELETEKVKYNDPSEEYYSLQALSNEIDFRGEDSIGNQIRKLFAGLPGTSDEERAELQRRAVRVYHKRSKLVHDGFLPPEELPGLEAEARELLETLFLAAIQQSKPADDRFRIEIEDPPGPRS
complement(1535875..1536669)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; KV38_07520; phage(gi557307613)     5.91e-40            MycobacteriumaviumsubsphominissuisMTTAAKPVAPSSAAPLAADLDAALRRLKLATVRRNAAEVLQVAKTQRWTPEEILRTLVEAEIAARDASNTANRLKAAAFPVTKTLDGFDVTGSSITAATFDYLSSLEWIRAQQNLAVIGPPGTGKSHLLIGCGHAAVHAGFKVRYFTAADLIEVLYRGLADNTVGKIIDTLLRADLVILDEIGFAPLDDTGTQLLFRLVAAGYERRSLAIASHWPFEQWGRFLPEHTTAASILDRLLHHASIVVTSGESYRMRHADHKKGAAKN
complement(1536666..1538246)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; KV38_07525; phage(gi557307612)     2.07e-12            MycobacteriumaviumsubsphominissuisMSFPGAEGLGGDGDSANCHLITAQGALLKSARERMNIISAYHQVGSYRGAAELCGTTHKTVKRVIERAEAGGAPPREPRPRNLDAFTDLVATRVEKSHGKMSAKRMLPIARAAGYQGSARNFRRLVAEQKVLWRNANRHQRRPAVWSPGDYLVMDWAEAAPGLMVFCAVLAYSRWRFVRFAADEKASTTLAMIAEALEAIGGVPAKILADRMGCLKGGVVANVVVPTPDYVRFASHYGFVPDFCHGADPQSKGIVENLCGYAQDDLAVPLLTEAALAGEQVDLRALNAQAQLWCAEVNATVHSEICAVPNDRLVDERTVLRELPSLRPTIGSGSVRRKVDGLSCIRYGSARYSVPQRLVGATVAVVVDHGALILLEPATGVIVAEHELVSPGEVSILDEHYDGPRPAPSRGPRPKTQAEKRFCALGTEAQQFLVGAAAIGNTRLKSELDILLGLGAAHGEQALIDALRRAVAFRRFRAADVRSILAAGAGTPQPRPAGDALVLDLPTVETRSLEAYKINTTDGTAS
1539105..1539371                   hypothetical protein; KV38_07530                                                     N/A                 MycobacteriumaviumsubsphominissuisMNIRSTKLEDWAIPEDAKQYIRDLRQENGRLRTQLKGKGMQIRPGVDVLPVKTRNELKRLRDEAGKWRRQFRAAQAELSELKAARADV
1539364..1540251                   helix-turn-helix domain-containing protein; KV38_26400                               N/A                 MycobacteriumaviumsubsphominissuisMSEFSKLTWLRESRPIIRTLTTTQRDVLDVIFDHANPDGTNAFRSQEQIAEAIGKRERQVRNVLGQLRELGLIVRTERGNRRLGKADVYALGSPAISDHRQSKVAGNDADGITGTPTLPVKPETEADYRQSADALPAISGVITGNPALPPNRPCTPDPGPIDPGIGKGEDDPRGESEHSAEFASCTQPGDYEPDPFRSDSPSGGDAHRRIADPFASLPSGSSAQGDSWGYSSGEHETSSEDAAGVRGSNFSSAESSAGSDDPEPGEPESVSRPGMSGDSRPWEDSRYGTFEQVPR
1540223..1541508                   PROPHAGE_Xantho_306: transposase; KV38_07540; phage(gi21243165)                      1.22e-72            MycobacteriumaviumsubsphominissuisMGRSSKYPDELRERAVRMVAEVRPQYRSQWAAITAVAGMLGIGTPETLRTWIRRSDVDGGVRPGVTSQMAEENKALRKQVAELRRANEILKAAANFLRGRARPARETVIRFIAEHKDHQVPGPDGGAGLRWGVEPMCAVLSEHGVPISASTYYEWITKTPTRRQMRDAELVEIITAARKDRTTGKFVQTLGSRKLWIWLRGQGHDVARCTVERIMREQGWQGARYGSKHKTTVTDETHVRHPDLVDRRFYACAPNRLWVADFTYVSTWSGFVYVAFVIDAFSRRIVGWRAATSMTTDLVLDAIEHAFFTRAAEGNTTLRGLIAHSDAGAQYTSVAFTHRLIDEGVDPSVGSVGDALDNALAETTVGSFKNELIRRQGPWRDVNHVEIATAHWVQWFNTERPHEYLDDFTPEAVERLHYDHRRTPPKAG
complement(1541718..1542530)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; KV38_07545; phage(gi557307613)     5.91e-65            MycobacteriumaviumsubsphominissuisMATKRAPAPGEADKLIAHQARLLKAPRIAAHYSRLAEQGRAAGWSLEDYLAAVLAVESNARAESGARQRIRYAGFPAIKTITDFDFTAQPHVDRAQIARLEAGGWLAEARNIVLLGPPGTGKTHLATALAIAAAQAGHRVAFAPATGWITRLAEAHRIGRLDAELRKISRIGLIVIDEVGYIPFDTEAANLFFQLVSTRYEKSSIILTSNLPFSRWGQVFGEATIASAMIDRIVHHADVIALKGASYRIKHTAIESLPSVEADRQADSTP
complement(1542530..1543747)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; KV38_07550; phage(gi557307612)     5.40e-17            MycobacteriumaviumsubsphominissuisMEDWAEIRRLHRSEKLSQAAIARRLGLSRNTVAKALDSESPPRYERAPVMTSAWAQIEPAVRAVLSEYPTMPATVIAQRVGWAGGHSWFSENVARIRSEYAPVDPCDRLVHLPGEQVQCDLWLPGRVVPDHAGVLRSFPVLVMVAAYSRFIAAVMLPSRVTGDLLAGMWLLLSQCIGAVPRTLLWDNEAGIGQRGRLAEGVAGFCGVLGTRLIQARPYDPETKGLVERANGYLRSSFLPGRQFGSPAQFNTQLADWLAQVANPRTHATTRMIPAQALGADRAAMAGLPPVAPSTGTTMTTRLGRDYYVSIGGNAYSVHPEAIGRMISVSASLDRVVARCGDRVVADHQRLWGTAGLASDPEHRAAASRMRETFRNRPAVAAHLDIEVQVADLGTYDAVFGTGEVA
1544188..1544382                   hypothetical protein; KV38_25310                                                     N/A                 MycobacteriumaviumsubsphominissuisMTFEEWLIHHEPYDAAIRADGDVPWHERPEHLARITERLGLPAGTPAIDVRRTLFNRSKKETNR
1544379..1544843                   PHAGE_Strept_phiSASD1_NC_014229: gp26; KV38_25315; phage(gi298103491)                3.11e-05            MycobacteriumaviumsubsphominissuisMTVEATTVEAVIPGAESPVDGQTIPGQGIARDGDSEAPKGNREARYRVERNEAREALAQAQARIEQFQLREVERFAGDLAQPSDLLEIGGNSLADFIREDGEVDPELVAEAVAALVEARPGLAKNPRQPAVDPSQGLGGHSGKASPTWGDLLKS
1545104..1546374                   PHAGE_Entero_BP_4795_NC_004813: putative transposase OrfB; KV38_07570; phage(gi157166063)     1.58e-67            MycobacteriumaviumsubsphominissuisMPKKYDEEFKARAVRLVSDHAEEYATRTACLTAVAKRLGVSYESLRRWINQAEVDTGVRDGAPTDTVRELRELKRKNRELEETIEILKAATKFLRAGERPATPLICAFIAEHRARFGVAPICRVLTEHGCVIAPRTFYAWLARPPSARALWDTVITEVLAGYYEPDEHGRRKPESLYGATKMWAHLQRQGITVARCTVERLMRVNGWRGVTRRKKVRTTVADPAATRAADLVKRQFRVRAPNVLLVADFTYVRLATGVFVYTAFAIDAYAGRIVGWTCSASKEDRFVRQAIRHAAQLRFNEGNPLMGNTIHHSDAGSQYTSVRFGETLTLSGLVASIGTVGDAFDNALAETTIGLYKTEAVRADSPFRRGPLQRLTDVELLTADWVHWYNTSRLMHRLGRIPPTEYETIYYATNTAQSEAAHP
1546576..1547397                   phage major capsid protein; KV38_07575                                               N/A                 MycobacteriumaviumsubsphominissuisMSMKRADQAQSWLPEDFGKMLDLVVQAKSVAALASTLFPTNKQKVAFPLWVADPAVGWYNELDEITAADGDTDEVEVTPSKTAGLTLVSNELADDSDPAVANQIASALANQIAHAIDAAYFANTTAKGPNGLLSLASTAVDPGTSVANLDAFVSARYAAEAHGAKLTHWLLSPAVAETLSKLKIQSGSNQSLIQFVEDGITVAGLPVITSTHVDADTVAWGVDKTQQRYVLRSGTTVERFDSVTNDGLYIRAISRIGVGFLNPAGVVRLYHAS
complement(1547507..1547851)       hypothetical protein; KV38_26405                                                     N/A                 MycobacteriumaviumsubsphominissuisMSSSVMLAASLICGLIAAAIGHSKNRGILGSFLLGALLNVIGIVVVAMLPSGVPKAPPGLRAVRCQNCNAVQNIPEADTTFECWQCKRVNAAPDTRRRGPEDTREWLNRVKKRP
1548342..1548566                   PHAGE_Mycoba_Bernal13_NC_024135: terminase small subunit; KV38_25320; phage(gi640883689)     7.40e-06            MycobacteriumaviumsubsphominissuisMAGFLWVGKLRPCSGPIEENMRKPTGLGTAGSKLWRTVTDTFDFEDEPAKVHILEQACRVADIVAVTALTEIPH
1548675..1550036                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; KV38_07585; phage(gi557307612)     2.02e-22            MycobacteriumaviumsubsphominissuisMLTWEDDVEVHALRKRGWTISAIARHTGFDRKTVRKYLAGDGKPGVRARPDPDPFDPYVDYVTARLTEDPHLWARTLYDELEDLGFVLSYQSLTRNIRIRGLRPVCEACRTATQRPNAVIPHAPGDETQWDWLDLPDPPASWGWGKAAHLLVGSLSHSGKWRGYLAPSEDQPHLVAGLDRVTRGLGGCTRVWRFDRMATVCDPGSGRVTASFAGVAKHYGVSVAICPARRGNRKGVVEKVNHTAAQRWWRTLADDLTVEQAQASLDRFARVRGDTRLRSTADGRSSVAVVAKTEPLQPVPAQAYPVIVAEIRTASRQAMVSYRGNRYSVPPELAAANVVVSHPVGGQFCDIATMSGIVIARHRLAADGLGVMVRDSGHVIALDAVAMATAATGRPHRRKERIPPGPAAKAAAAQLLALKQPSNTSSETSTPSTDSTVIDLSAYERAAQNRTIQ
1550033..1550884                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; KV38_07590; phage(gi557307613)     6.71e-53            MycobacteriumaviumsubsphominissuisMTPTPRTNKAPTRTEESPSAAASRYQQLRSHLAELKLAAAAEALPAVLDQATAEGLSLTVALERLLAVEVEASTARRLAGRLRFACLPTPATLADFDVDAAAGIDRKLIDELGTCRYLETATNILLIGPPGTGKTHLSVGLARAAAHTGYRTYFTTAADLAARCHRAAIEGRWATTMRFYAGPTLLVIDELGYLPLPAEAASALFQVVSQRYLKTSIVITTNRGVGAWGEILGDTTVAAAMLDRLLHRSVVINLDGESYRLRDHHDAAETLRRTTTGTRQPLH
1552529..1552542                   attR                                                                                 N/A                 GCCTTCACGTTGTA

#### region 3 ####
2790109..2790120                   attL                                                                                 N/A                 GCCGGGCTGCTC
complement(2801497..2802659)       PROPHAGE_Xantho_33913: ISxac3 transposase; KV38_13100; phage(gi21231086)             8.20e-43            MycobacteriumaviumsubsphominissuisMARPYPREFRDDVVRVARNRDDGVTIEQIATDFGVHPMTLQKWLRQADIDEGTKPGKSASESGELREARRRIKLLEQENEVLRRAAAYLSQANLPKRVYPLVKELAADGIPVAVTCRVLKLSRQPYYRWLADPITEAELIEAYRANALFDAHADDPEFGYRYLVEEARDAGEPMAERTAWRICSQNRLWSVFGKKRGKNGKVGPPVHDDLVERDFTAEGPNQLWLSDITEHRTGEGKLYLCAIKDVFSNRIVGYSIDSRMKSQLAIRALHSAVARRGDVAGCILHSDRGSQFRSRKFVHALNQHEMVGSMGRVGAAGDNAAMESFFSLLQKNVLDRRRWDTREQLRIAIVTWIERTYHRRRRQSGLGRLTPIEFEAIMTTPASQAA
complement(2802824..2803675)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; KV38_13110; phage(gi557307613)     6.71e-53            MycobacteriumaviumsubsphominissuisMTPTPRTNKAPTRTEESPSAAASRYQQLRSHLAELKLAAAAEALPAVLDQATAEGLSLTVALERLLAVEVEASTARRLAGRLRFACLPTPATLADFDVDAAAGIDRKLIDELGTCRYLETATNILLIGPPGTGKTHLSVGLARAAAHTGYRTYFTTAADLAARCHRAAIEGRWATTMRFYAGPTLLVIDELGYLPLPAEAASALFQVVSQRYLKTSIVITTNRGVGAWGEILGDTTVAAAMLDRLLHRSVVINLDGESYRLRDHHDAAETLRRTTTGTRQPLH
complement(2803672..2805033)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; KV38_13115; phage(gi557307612)     2.02e-22            MycobacteriumaviumsubsphominissuisMLTWEDDVEVHALRKRGWTISAIARHTGFDRKTVRKYLAGDGKPGVRARPDPDPFDPYVDYVTARLTEDPHLWARTLYDELEDLGFVLSYQSLTRNIRIRGLRPVCEACRTATQRPNAVIPHAPGDETQWDWLDLPDPPASWGWGKAAHLLVGSLSHSGKWRGYLAPSEDQPHLVAGLDRVTRGLGGCTRVWRFDRMATVCDPGSGRVTASFAGVAKHYGVSVAICPARRGNRKGVVEKVNHTAAQRWWRTLADDLTVEQAQASLDRFARVRGDTRLRSTADGRSSVAVVAKTEPLQPVPAQAYPVIVAEIRTASRQAMVSYRGNRYSVPPELAAANVVVSHPVGGQFCDIATMSGIVIARHRLAADGLGVMVRDSGHVIALDAVAMATAATGRPHRRKERIPPGPAAKAAAAQLLALKQPSNTSSETSTPSTDSTVIDLSAYERAAQNRTIQ
2805158..2805391                   hypothetical protein; KV38_25610                                                     N/A                 MycobacteriumaviumsubsphominissuisVSAVKADRSADDDGDDTDFWLALPGFRDSLIAAEADHGAGRTFSEEEIYAYVGLPQRDTDQEELRRRCMAHGKWMSDH
2805443..2806728                   PROPHAGE_Xantho_306: transposase; KV38_13125; phage(gi21243165)                      1.22e-72            MycobacteriumaviumsubsphominissuisMGRSSKYPDELRERAVRMVAEVRPQYRSQWAAITAVAGMLGIGTPETLRTWIRRSDVDGGVRPGVTSQMAEENKALRKQVAELRRANEILKAAANFLRGRARPARETVIRFIAEHKDHQVPGPDGGAGLRWGVEPMCAVLSEHGVPISASTYYEWITKTPTRRQMRDAELVEIITAARKDRTTGKFVQTLGSRKLWIWLRGQGHDVARCTVERIMREQGWQGARYGSKHKTTVTDETHVRHPDLVDRRFYACAPNRLWVADFTYVSTWSGFVYVAFVIDAFSRRIVGWRAATSMTTDLVLDAIEHAFFTRAAEGNTTLRGLIAHSDAGAQYTSVAFTHRLIDEGVDPSVGSVGDALDNALAETTVGSFKNELIRRQGPWRDVNHVEIATAHWVQWFNTERPHEYLDDFTPEAVERLHYDHRRTPPKAG
2807598..2808868                   PHAGE_Entero_BP_4795_NC_004813: putative transposase OrfB; KV38_13135; phage(gi157166063)     1.58e-67            MycobacteriumaviumsubsphominissuisMPKKYDEEFKARAVRLVSDHAEEYATRTACLTAVAKRLGVSYESLRRWINQAEVDTGVRDGAPTDTVRELRELKRKNRELEETIEILKAATKFLRAGERPATPLICAFIAEHRARFGVAPICRVLTEHGCVIAPRTFYAWLARPPSARALWDTVITEVLAGYYEPDEHGRRKPESLYGATKMWAHLQRQGITVARCTVERLMRVNGWRGVTRRKKVRTTVADPAATRAADLVKRQFRVRAPNVLLVADFTYVRLATGVFVYTAFAIDAYAGRIVGWTCSASKEDRFVRQAIRHAAQLRFNEGNPLMGNTIHHSDAGSQYTSVRFGETLTLSGLVASIGTVGDAFDNALAETTIGLYKTEAVRADSPFRRGPLQRLTDVELLTADWVHWYNTSRLMHRLGRIPPTEYETIYYATNTAQSEAAHP
2809054..2809251                   hypothetical protein; KV38_25620                                                     N/A                 MycobacteriumaviumsubsphominissuisMIERDGFEKPNQFGYFPDGYHIQIKAAYPPDYPPTIVATSPCFPGDLRRDGLPVPKVIQQGSPGS
2809377..2810684                   PHAGE_Pseudo_Littlefix_NC_048697: portal protein; KV38_13140; phage(gi100069)        5.54e-11            MycobacteriumaviumsubsphominissuisMSDVEPSALAAVLAGEDSSVRRAVQLVGQILTGSVTTQVTLAGFLHAMLGRSGSDLVCESRRLSSIGHVAAGLALAALIDRFDPPIGPSDDDEPPTWAHIEIGDKHLAPPARLSAFFTAGQLAPAPVVVRLSSSTLYSDTPRLQVYTTPADRGHAVAVIEAIMTDADGAKNLYRGRALTASENNGLVLEVTDIPTLSRTNVVVPESVWEEIDLNIAALTTHRQLMTQLGLGVRRGILLAGPPGVGKTAISQTIAAELVGPFTVINVDARAGKSVLSAVYKEARALGPTVIVLEDIDLIVGNRRHHGEVRPLSEFLAVMDTDPSAPILTLASTNDVAALDAAAIRTARFDSIIEIGYPTSEAAAQILTTYLRGIPGAESIDASQVAAHFNAETNGADIREIVRRTVLATGTVSDTALLATIRSGRFKPELPQGNYL
complement(2811153..2811431)       PHAGE_Strept_PH15_NC_010945: putative transcriptional repressor; KV38_25625; phage(gi190151419)     1.67e-06            MycobacteriumaviumsubsphominissuisMPTRPSQNSPERVAQWERWRSVVGHNIRELRIQQGMTQEALALRSGVTRNVLIDVEHGRRGLLYERLFDIAEALQVPVNELLVARARRRNKR
complement(2811994..2812287)       hypothetical protein; KV38_25630                                                     N/A                 MycobacteriumaviumsubsphominissuisMSGSKRGRRSGSERRRLTETVVVRLAPAEKKILEEAAARMGISIVRLVRESINGHIREPVLATGERNGPPNIKKSERGSATADSAYAEEVVVPLGQD
2813652..2814086                   septation ring formation regulator EzrA; KV38_13150                                  N/A                 MycobacteriumaviumsubsphominissuisMETLARLFLSSDYQCKTLLQSLVHRHASGDIGDELRSAMEQFAASVDLHRVLSEDPSYRQARDEIETLRKRLRLDVDAADQRDQELARLRRESEELRRLRIRVAELESVVASAAYPLHQAGQHDVMLSRQQRRAVERAARKGRY
2814291..2814500                   helix-turn-helix domain-containing protein; KV38_25645                               N/A                 MycobacteriumaviumsubsphominissuisMALLDGHWYSSAELAELLHVDASTIRRWRTSHPPKGPAFVRVSDRVYMYNSNDVEAWLSSRHVDPGEVA
2814564..2814575                   attR                                                                                 N/A                 GCCGGGCTGCTC
2814680..2815705                   PHAGE_Gordon_Attis_NC_041883: holin; KV38_13155; phage(gi100034)                     2.07e-15            MycobacteriumaviumsubsphominissuisMERAAAHGVDPKTATTTLAEYGTTNMALALRGLESKTTDPYLAGWRKRVVPTLGHLPIAMVTNGAVDRAVHAWIADECSRSTVKNSLAVLVRIMEQALRDGIIDRNPARVSGWQRQYKLAEDELDDPRALALPNWTALTTLADALVARSAGRYRGWGDAVIFEACTAARIGEVAGCLVRDINTHEWIWTVRRQTTPSPGGLVDKNTKGKRAREVPLIPAVRELVQRRMDVVASNPDARLFVGPRGGRITTATLRDATSWDAVVTQLGYEKLTRHGLRHTGLTWMADAGVPVHILRKIAGHGALTTTQRYLHPDRQSVIKAGDLLERHLWSPNGPQLRVISS
