gi|00000000|ref|CP009610.1|  Haemophilus influenzae strain Hi375, complete genome. 1850897, gc%: 38.16%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
642088..642104                     attL                                                                                 N/A                 CGGACTCTTAATCCGTC
complement(642241..643266)         PHAGE_Escher_HK75_NC_016160: phage integrase family protein; NF38_03165; phage(gi356870702)     6.52e-67            HaemophilusinfluenzaeMPIRKNKNGVWQIDFTTPSGERVRCSSKTTDKKLAQHLHDKLKHEAWQVEQLNKKPEKTVEQALILLLKDAEHKKDKLTKIQHAKYWRDEIGNKLLSSLTSEDIQNAIPTHVVRTGKILSPATQNRYRSSIMRAINLAKQAGWIDVVPYIAKNSEPKKRIRWITEKEAERLLDSLNLNWMKDVCQFALLTGARMTEILSMTWDKINFANKMAIVTGDIAKSGRGRSLPLSDDAINLIKERMKYQVSPYVFHSGTGKLRDDISRRDFKRALQRANIKNFRFHDLRHTWASWHIQRGTPLMVLKELGGWETIEMVQKYAHLNADHLLSYVNQVKFSSNTRLAR
complement(643164..643478)         hypothetical protein; NF38_03170                                                     N/A                 HaemophilusinfluenzaeMEQTLTIRDVAKCLNLSETTVRKNKLKWGFFQMEGSRMWRVFKSDLDRNRKKAENLSDLYAKVGDTQEKQKCRSAKIKMACGKSILPHQAASEFDAVVKQLTKN
complement(643605..643892)         hypothetical protein; NF38_03175                                                     N/A                 HaemophilusinfluenzaeMAKYLYRYALESNNPTNNDDGNTWEDESRCFDNVALHIAKENAYSWDMFEEPEREVMYVWRDGDFENRLRFLAKFEVIQRLDVIELEEDDDPNDF
complement(643896..644165)         hypothetical protein; NF38_03180                                                     N/A                 HaemophilusinfluenzaeMSENNGWINCANELPEPFSTDLEYRNATNKHLIYFTEDGDHWAVGLGWYLYDDKSDCEGCLIPYWESDENPGEEVEVIYWQPLPQPPEE
complement(644430..644918)         hypothetical protein; NF38_03190                                                     N/A                 HaemophilusinfluenzaeMKVLDEHILEYIWDETLDRIAQHTLVTYIGGSVGTYSDDHAEKRAEDFAILSVRHLIEGSGLSESQFRRRVKKLMAQGVLLQRIGPNSFVINSDVVKDAAVHAARCWRAIGVPYGMDDTGRACKTLPINALPRSIFELKTNCYRILRSEYPSYKGKGVGNEQ
complement(645035..645451)         PHAGE_Acinet_Ac42_NC_014660: Arn.3 conserved hypothetical protein; NF38_03195; phage(gi311992576)     1.57e-13            HaemophilusinfluenzaeMDIINLIKQQTPEERQTLFNEFIKLLNQKREYVDIPERIVCSACQVFVDERDGTNEDGGEIIHEVYGLRHYDPFMRKQIKELEKQYKYALLDWEQGFLTNKGRFVGRKEAMEIAKAQNQVIRLSGSPNSDILFSEDLY
complement(645455..646108)         PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956: pyruvate kinase; NF38_03200; phage(gi971760525)     2.10e-07            HaemophilusinfluenzaeMKEFNLDAALNGEPVKLRNGLKAIVYYRIPDEFSYPGGSTEIYPLLGIIFNKDGTIKGASENWKDCGAYCSCQGGLDIVGMWEEHKLTSEQVLEKAYKENFLVLCDGNPDLPLKVIAKTKNGEFVMQPEDGIIQPWLANLTMEWFFVKKLDPKFDTSTLPKPFKPHIGDEFFYLSDGVIRYFSFYADCAANLMINGQCFRTKEDAQKWLDFMKSMME
complement(646159..647322)         PHAGE_Burkho_Bcep22_NC_005262: putative DNA methylase; NF38_03205; phage(gi939482376)     3.92e-110           HaemophilusinfluenzaeMFTYGSICSGIEAVSVAWKGLSKPLWFSEIEPFPCAVLAYHYPNIPNLGDMTTLPEKILNREIPAPDVLVGGTPCQAFSVAGLRNSLDDDRGNLTLTLIHILEAIDYVRYQDGKQPCVLLWENVPGVLSTKDNAFGHFLAGLVQERQPLQPTGRKWTNAGLLHSARTVAWRTLNAQYFGLAQRRKRVFLVASARERSVAQILFERKSLQGYSQSCGKTQQGFTCYAEGSFGTYRQSVLGGLVKASGGALGGGSETIVVHGTQDPIISTSTAHCLGRNNGQENVLFDISDRRDVVRIQKDGTTPTLTARMGTGGNNIPCMSINQNIRKLTPSECEKLQGFPPGYTQISYRNKPAEDCPDSPRYKAIGNSMAVPVIKWIGERMINYLNK
complement(647330..647689)         hypothetical protein; NF38_03210                                                     N/A                 HaemophilusinfluenzaeMNEINIKLPLHKFQNLMISHVRYSLPRHTYIVSETIHDVKTYWSVLSSNTREVITRDINEHLKRWASDRNNAFHKLDYDSWEELFDWINESRSSTSTTVTTAKPLVPVLPVINPKQRKK
complement(647686..647931)         hypothetical protein; NF38_03215                                                     N/A                 HaemophilusinfluenzaeMRLLKRLAEKVLIDDLRRLDKHIDKSIELHELKLRKLGELIKSLEAENNQLKRENATLETELRAIKQERIFSKRKKKSKRK
complement(647928..648824)         PHAGE_Vibrio_VHML_NC_004456: ORF10; NF38_03220; phage(gi27311176)                    4.96e-70            HaemophilusinfluenzaeMYWFRNAIIYQLTKQIDFENIEKQLKECEFTPCGSADVSHFGWSAPLVTSENLAHQANGKILLVAKREEKILPVEVVNRELNKRITALEEKEQRKLKKVERSSLKDDVIATLLPQAFSRIKTTALYIDTLKQLIFVDTASSKTAEDVLALLRKSLGSLPVVPLAFNCAPCEVMTRWVTDTAPDWLILRKEVEIREKEDLGVIHCKQKDIEDEEIIDLVQNGLISKLALEWENNLKFILVEDGTLKRLKFDDNITEQNDDIVKEDVTARFDVDFVLMASVLGKTVDSLIKEFGGIRDRL
complement(648949..650025)         PHAGE_Pseudo_phi2_NC_030931: hypothetical protein; NF38_03225; phage(gi100013)       7.06e-138           HaemophilusinfluenzaeMTEENKEIIAYKGFNQDWTCRGYQYEIGKTYEHKGDVKACKSGFHACEYPLDVLSYYSPAVSKFAVVKMSGETSKDSDDTKIASAKITIETEINLPEMVKKAVEWIKGKVDWDAAEKSNTGNGSVATNTGYQSVATNTGDRSVATNTGSWSVATNTGYQSVATNTGDLSVATNTGSWSVATNTGYQSVATNTGNRSAATNTGDQSAATNTGYWSAATNTGYRSAATNTGYWSAATNTGYQSAATNTGYRSVATNTGDQSAATNTGDQSVATNTGDQSAATNAGDQSVAEVSGKQSIAVALGWQSKAKASINGAIVCVYRNHDGELIHIKASKVGENNIKADTWYTLDEIGEFVEVKDD
complement(650088..650522)         PHAGE_Vibrio_VvAW1_NC_020488: single-stranded DNA-binding protein; NF38_03230; phage(gi460042909)     2.70e-25            HaemophilusinfluenzaeMARNTNTVILVGHLGSDPEIRQFQNGGQIATFNLAIGDDYRDKQGNTVKRTHWIPIVVHGNSADVARQYLQKGSKICVTGKLVQESWLDQNGNNRTALKVATQSFEMLDSKASNETQQPSKDKEKPDPLSAAAEQDGLDDDIPF
complement(651196..651696)         PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; NF38_03240; phage(gi195661233)     1.32e-23            HaemophilusinfluenzaeMKLYEITEQLENIKELLENPEFADNADIAKALDAVQQDFDKKAENVVYVIKNTEGDIEVIDAEIKRLQAMKKQRQNGIEQIKNYLKHNMEATGTAKINCPLFTISYRESKQSAVQLDEDLFLANNCDETLVNVKITANKTEIKARLKAGEEIPGAKLVDSQVLTIR
complement(652027..652215)         hypothetical protein; NF38_03245                                                     N/A                 HaemophilusinfluenzaeMRLTYKTYAESAVKAEKKGHYLETAKNWADAKRHTAVQKNIEYCQHRIDFCERHHFRLKSMS
complement(652215..652514)         hypothetical protein; NF38_03250                                                     N/A                 HaemophilusinfluenzaeMQKFTDVFTEIIPFLCKTAIAFAIAFLIGGIAHCFVDEPTDWHDNELSEQIQQEARCELKGGIYENGVCLPPNLTLATEKELQDYTAQKQAEINRTWSK
complement(652610..652900)         hypothetical protein; NF38_03255                                                     N/A                 HaemophilusinfluenzaeMSLLISALVAFITAIITSLILYRLKSHVAQKDNSDDLHRLKIDSLRTQLQSQETAGENLHTECKGAPLNQPTHRPEPDSIQTTDEPKASPPYSKHQ
complement(652985..653638)         PHAGE_Aggreg_S1249_NC_013597: hypothetical protein; NF38_03260; phage(gi100056)      8.04e-58            HaemophilusinfluenzaeMSNLTILKTSIRSYENLFSLNDLHIASGGLEKHRPSLFARNEQTKELIKEIENDRSTKTIFALKTIRGGSDISKQGTWACEELVLSYAMWISPKFHLIVLRAFLAMHRNQPQQLALPEPEKFTFEFTEYELQQLAWLWFAFKRGVGTFQHIEKAFNVLGSNMSGQIYGQAYEYLSVLRSTNQILNRITSDFNIDPMTNWRVLKHLRGFNPKAVKIDF
complement(653909..654154)         hypothetical protein; NF38_03265                                                     N/A                 HaemophilusinfluenzaeMLFGWLCYIGAVVSIGYGLSKIMMYKNFGPDLSSLNVNAYVGGDGYNYIINGTYATTFCALAAALAIIGSTCFIVNAINKK
654488..654754                     PHAGE_Staphy_StB20_like_NC_028821: CRISPR-associated endoribonuclease Cas2; NF38_03270; phage(gi971746517)     3.52e-13            HaemophilusinfluenzaeMANLILTYDLRNQRDYKSLIEAIKSYGTYAKLFESVWYIRSRTHTAEQCRDYLLQFIDNDDRLGVFDCSNNDFATMRALNKVSNLWSN
complement(654740..654979)         PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: hypothetical protein; NF38_03275; phage(gi971749635)     6.42e-17            HaemophilusinfluenzaeMEEKRYSEAGSVTSNTITEIQKEHIRACILKAIENGAYHPGLEERACQAISYINRFSDAQTKEELIDNKTGEVYVLVRP
complement(655306..655527)         hypothetical protein; NF38_03280                                                     N/A                 HaemophilusinfluenzaeMQDEMKRYAISYYFDGKRWATDVYAHSFEEAEEKLKAMSQGTVDGEIHLSVYIPENPLSKVSRLITRIAKKFM
complement(656268..657116)         PHAGE_Aeromo_phiO18P_NC_009542: hypothetical protein; NF38_03285; phage(gi148727147)     3.15e-75            HaemophilusinfluenzaeMSKTYIVYLDEFGHIGPYLSSTHPKHNTHPAFGLGGFVLPINAVRPFSSFFFELKLKLFENFDIKQAKEKARSKGERFQLSTWEKKGSKQYSVINLKKYKQLIVESTSRIINRITSKGGFLFYVGEAKFRNPEQHNPQEVYKSSLTEIIKRLDDEFHSEEAHFLIFMDDSEGSADLVKRSIYEMHQNGRYQLIEAPMQVDSELYQTIQCADWLCAIYGKIAYYQIEPEAKPDYELFVRYFGDKIARAQKRSNVRNNLPKPASKEKLLKLKDKFDNRCCKYSK
complement(657377..658078)         PHAGE_Mannhe_phiMHaA1_NC_008201: CI repressor; NF38_03290; phage(gi109289970)        1.01e-30            HaemophilusinfluenzaeMKTLGERVKARRMELGITQKELGDLVGISQNSITKIENGGNTIHIAKLASALGVSVAWLSIGVGDRDDDIVDNSGLDKQLVSSEPDLLHKHRIDYYDVRAAAGLNGFENSDYPEIISSLFLTDEGIAQLVGKKSADGICLVNVPTDSMDPTIRKGDIVFLDTKVNAYCGDGIYAFAIDGALFIKRIQKMIGGGYRMISDNEIYPPEQISDDVCENAKFIGRFIRTIHIEAVNL
658227..658442                     PHAGE_Escher_PA28_NC_041935: hypothetical protein; NF38_03295; phage(gi100029)       5.60e-15            HaemophilusinfluenzaeMMNKTILKAIKIFKSQQALAAACGVSQNAVSKWLNGGSISLENALKIEKATNGKVKAEMFSKEFSSLLARN
658630..659223                     PHAGE_Aggreg_S1249_NC_013597: dsDNA binding protein; NF38_03300; phage(gi100047)     3.23e-43            HaemophilusinfluenzaeMQRRISEYGFVENQDFVVLLKNEKNPIGGRPSREWFISIDMAKELSMVERNEKGKQARQYFIEMEKVAKNQQKPTALIPQSFSEALMLAAQLQAEKERNAPKVAFVDHYVEVGTSKSFRETAKILKMPERALVNRLVEDKYLYRQSGVLLPYQSAHTKDLFTVKTGTAEHGHNYTQTRVTSKGIEFIASRYASELML
659220..659978                     PHAGE_Aggreg_S1249_NC_013597: late promoter transcription; NF38_03305; phage(gi100046)     5.30e-85            HaemophilusinfluenzaeMSMRLMVQAMNCKVGNPARKLVLLKLADNANDDGICFPSYQYIADKCEMTRRSAINHIEYLIKMGLVSKKERKNKDGSISNLYFLHLEQGSENFALGSENISLGSENFALGGSEKFAPITSHSLEPVNEPKKTTQKSESEILLERFGITGQLAKDFITHRKTKRGAISETQLSRLQKQADKAGISICEVVEICIERNWQGFNASWDWRDEKLRPNSPHLGQSHRNKPKFDDTQTGWSAGMNFIVDGTQWQIP
659963..660598                     PHAGE_Aggreg_S1249_NC_013597: loader of DNA helicase; NF38_03310; phage(gi100045)     4.41e-25            HaemophilusinfluenzaeMANSITQNQINTLPPERTQRAEETINWLFQELKSIFPGWRAAFETEADYLSAKKTWLRVLVREKITRPQLENGICEAEKSLDKFLPSVGLFVYWCKAYDYHALGLPNEAELYQRYNTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKAIPKLLIEAAEKVRSNFPFEDIPKMIPVKPSFYDKAKADKARDSLMAMMKGVLQ
660595..660819                     PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: hypothetical protein; NF38_03315; phage(gi971749649)     2.81e-13            HaemophilusinfluenzaeMTSYKCPKCGAELEDFYTPDYFISSSEWDDDRFRCNGHLIEPIPFPQVSKYSAVNRTKSCGYFGLEDLGVEYKE
660856..661275                     PHAGE_Aggreg_S1249_NC_013597: RNA polymerase binding protein; NF38_03320; phage(gi100043)     1.05e-87            HaemophilusinfluenzaeMSQYKPFFLRDQRIKNNCLDLIKELPTDDKKPLVVKIQPITRSLEQNSKLHALLSDISKQCEFNGKKRDIDTWKMIMVSAHKIATGGQAEMVIGLEGEVINLRESTAQMSVKRLASLIEYVQSWGVQNGVRFNDRWGFK
661364..661900                     PHAGE_Aggreg_S1249_NC_013597: RegA; NF38_03325; phage(gi100039)                      1.36e-98            HaemophilusinfluenzaeMAKEYKCKVCGKAFVKTFSSTQKVCSPECAIKLARDNAQKAQERAEKKKQRERKAKLKSRSEWLKEAQSAFNKFIRLRDKNEPCISCGRYHQGQYHAGHYRSVGACPELRFCELNVHKQCAPCNDHKSGNIIEYRINLVNKIGADKVAWLERQDHEPKKYTIEDCKAMIKYYKAKLRS
661909..662427                     PHAGE_Escher_HK639_NC_016158: Q antitermination protein; NF38_03330; phage(gi356870666)     5.02e-25            HaemophilusinfluenzaeMRKFSELSELTIEQEEFVDRYMYQWGAWVRSGRLDKPQLNIIAKLMQSVIPAEPNEPICDDETGFMISQTIEMFFKKNDQILHFIVFAYYVNKRTINFIAEHLHGKSKAKEMRPCAGKSNVRVPSFRTIYREVEKEIHFAKAIIHELLITCFIIQRTSRERATNIKKIKITY
662549..662622                     tRNA                                                                                 N/A                 AAGGGCGTAGTCTAATGGTAAGACAGCGGTCTCCAAAACCGCTAATTGAGGTTCGATTCCTTGCGCCTTTGCCA
662688..662939                     PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: holin; NF38_03340; phage(gi971749660)          5.33e-14            HaemophilusinfluenzaeMLKDAGSQSIFWSGFGAFWAMYSFQEWLAIMGLVIGLISGLVNMYAKCQEGKVRKNEERRAEEIHRVKMKRLSLGFDDDFDKN
662920..663462                     PHAGE_Mannhe_vB_MhM_587AP1_NC_028898: endolysin; NF38_03345; phage(gi971753872)      1.93e-57            HaemophilusinfluenzaeMILTKTRKALGVCSVITVMGLMYAQFGGELRLSPVGAEIIGNAEGCRRDPYQCPADVLTVGIGSTEYGGKKINPKHRYTDLEIAERWKNDIVIAERCVNKYGNGEMLPQSVFDSAVSITFNVGCGAVSKSTMFKYLRAKQYEKACGEFPRWVYASGKKLAGLVVRREKEKALCLADLKLP
663459..663770                     PHAGE_Aggreg_S1249_NC_013597: hypothetical protein; NF38_03350; phage(gi100032)      7.04e-42            HaemophilusinfluenzaeMKLTALCLILGLCGWTWFQSQKISSLKAENQAQAQTIQQQEDANKALAITLQQERDAVIEQQERNNEIERIATENAESVKTIIKTQPCAHTRLPQSVLDRLYK
664234..664707                     PHAGE_Entero_c_1_NC_019706: terminase small subunit; NF38_03355; phage(gi428781736)     9.87e-54            HaemophilusinfluenzaeMDNLYDLKLNINQIAELVGMHRQTVSQRLAGLTPAIGSNSKLKLYALSDLIKIGLAEKMTADVDSLSPVERRAFWQAENERLKYERDTGELVPSFEVAQEMGFLAKAVVQSLDTLPDILERDCALTPAQLTRVIQVIDDVKSQMSLHIQASDNKSEE
664710..666833                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, large subunit; NF38_03360; phage(gi169257299)     0.0                 HaemophilusinfluenzaeMFASAKDIRRDIANLLKPPRRMKVSEAVAEYMRVPVGGGNSVKWDKDTAAYMLDPMDCLNSREYDAVIFVGPARTGKTIGLIDGWITYAIICDPSDFLLVQLTQEKASEHSRKRLDRTFRCSPEIAKRLSPRKNDNNVHDKYFRAGNLLKIGWPSINVLSSSDYKYVALTDYDRWPDDVDGEGDGFSLASKRTTTFMSAGMTLVESSPGKDIVDIKHHPKTTHEAPPTTGILSLYNRGDRRRFYWQCPHCKEWFEPSMANMVGYRDDTDYVKASENARLQCPHCQSLVDPDKKRALNIGGKWLKEGQTIDKDGVIHGEGRNSRIASFWLEGPAAAYQTWAQLTYKLLTAEHEFEMTGSEETLKAVTNTDWGLPYLPRSALEQRRSDELMERREDTEKRTVPYGCRFLLAAVDVQGGRNRRFVVQIVGYGENSERWLIDRYNIKSSMRSNSDGESLPIDPSAYPEDWDLLISDVLNKQYRIEGLDGGVMPILAMAVDSGGEDGVTDNAYKFWRRCKRDGISKRVYLVKGDSTKRQKLISRTYPDNTSRSDRHAKARGDVPLYLLQTDQLKDRISNALSRETIGANYIHFPSWLGEWFFDELTYEERGQDGKWRKPGKGNNEAFDLFCYAHAIAILRGYERIKWGDEDNVPYWAKLPGLNPDVIRKETTALEEETESAVEIEQVKLQPKPKTKSNWLNGGVSKKKGGWL
666830..667048                     hypothetical protein; NF38_03365                                                     N/A                 HaemophilusinfluenzaeMIYDKDELEEKIRTLDEKIENAQSQVSFNGRSVSYQVSEWTKQRDRYQQMLNELLAETRQRVKRHRIKYARF
667052..668575                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage portal protein; NF38_03370; phage(gi169257301)     0.0                 HaemophilusinfluenzaeMGILDKAIAAISPKWGAQRAKSRYVMNAYEAAMPSRTHKAKRESQGANVSTKQSAVSLREQARALDQNHDIVIGILDKMEERVIGSRGIHIEPQPMNLNGDVNETLAEQIRKKWAEWSICPEVTGQFTRPELERMLLRTWLRDGEVFIQLVRGSVAGLNHSTKIAFSLEALEPDFVPMNTLDTANLIQGVELDAWRRPKSYRVYMDNPQENNRTYGRVKSVPAENMLHLAFKKRLHQLRGVSMLHGVIIRLADLKDYEESERVAARIAAAFTMYIKKGDAALYGDNEDYSADSPERDFEIAPGAIIDDLKPGEDIGLINSNRPNVNLETFRNGQLRATAAGTRSSYSSIARDYNGTYSSQRQELVESFEGYSVLQDTFVAHISRPIYREWLKMAIVSGEIDVPVDIDPASLYNAVYSGPVMPWIDPTKEAQAWKERIKGGLATESQAVRASGSNPAEVKRRRRVEVEENRKFGLKFDTDLTNTGTTNDKTKNDSVAGGDGNERNKDE
668511..670553                     PHAGE_Pseudo_MD8_NC_031091: DNA topoisomerase II large subunit; NF38_03375; phage(gi100005)     0.0                 HaemophilusinfluenzaeMTKQKMILSPVAMATSATKTNNQSWYSIKAKANDTAEISIYDEIGFWGVSAASFAQDLKDCGNNIKQINLHIHSPGGDVFDGIAIYNLLKNHPAKVTVYIDGLAASMASVIAMAGNEVIMPENAMMMIHKPWGIQGGDAEDMRKYADLLDKVENTLIPAYANKTGKTPEELAEMLSAETWLNGKECVEQGFADKLAEPLVAMASIKSRKLEDFENMPKAMKDMLFKPQGNAGASAPQATPTPAQPAPTEPVNQAPTAPVDNTAQVQAELNKRNADIKAVFAPFGTTHNDLLVECLGDLSITADQAKDKLLAKLGAGTTPSAAVTPYADNGNIVGDSVKQSLLARAGIDKDKVNAKDNAYNAMTLRELARASLVDRGISVSGQNAMSMVGLAFTHSSSDFGQILIDVAHKSLLKGWETAAENFDQFTSRGTLTDFRAAKRVGLGDFGYLPQVGEGEEYTYGTIGDEGASVALATYGQLFSITRQAIINDDMHLLTKIPEKMGQAARATIAKLVFALLTGNAIAQDGKALFDASHKNTLTGAALDVTNIDKAIQMMNGFVNTRGEPLAIEPDFMLLPTSLYTRAKQVLGSASVEGADINSGIINPIRDIVPTVKSARLQVADPKSWYLINKEAIEVSYLDGIDTPYMEQQQGFTVDGVSTKVRIDAGVNVIDYRGVVKVTNK
670632..670955                     PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NF38_03380; phage(gi428782322)     2.03e-19            HaemophilusinfluenzaeMAKNYMQDGNTVRFTAAAAVKSGDVVMLENLAVIAVSHVAQNETGVGLTTGVFTVKAKAEDDIKQGAIVYWSATDGATITAGSNKRLGIAWHASGVSMGTVDVKINT
670936..671247                     hypothetical protein; NF38_03385                                                     N/A                 HaemophilusinfluenzaeMSRSTLSPFDDALAQADKVISDVMMSVYVINGKKYKAVLDESPKLMSGNYTDDYLINGTTRTLTLFKASGYKPKLGDIIISSTEEYVVRGFSFEDGKIVLQLE
671250..671780                     PHAGE_Entero_mEp237_NC_019704: minor tail protein Z; NF38_03390; phage(gi435439275)     1.70e-36            HaemophilusinfluenzaeMAVKIEGMAALQANIQKLANQVAPKAAAKAINKVARSAIKNGTKNVSKEIHVPAKLIRKRTRLSQKATANRPVAKIRVDRRNLPLIRLLENPRRTMRASKGQIRIGKYQIQRGFIQTLANGRKHVMQRQGKERYSIDVVKIPLSRPLTTAFHNELKDYSSQIKVELTRELSDILKK
671789..672199                     PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage minor tail protein; Lambda gpU homolog; NF38_03395; phage(gi169257192)     1.32e-11            HaemophilusinfluenzaeMLIHKKIRHQVSDMLKSSIKGVENIYSGRPLFIDIDQEKTAIAVFLDEISCEEVDLCHHEYTAALNIAIYLKTALGDDTLDDIADKIKERLSVAISNDELSENISEMTLISYEYEQDTTNRTWFVSNLKYQIKYED
672202..672852                     hypothetical protein; NF38_03400                                                     N/A                 HaemophilusinfluenzaeMPTQTTPFQGTKFYLGTGLTEGKAVTAVTVKPNATITSAGHGAKVGDFIKLTGLGALDGYYPVKAVTNDLITLADEVDWTSQDAPASYAAVKVSTVKWSSNFCAIKQIEGDGDTLGEEDITTMCSEGTETEAGEIEYGSIKLTFFYAPATAMQADLRKKFYAKETFPWMMILKNAQGSLYGTGFIQTSPNFSGEVKGKFESGVTIKKAKRDYHLPA
673127..673534                     hypothetical protein; NF38_03405                                                     N/A                 HaemophilusinfluenzaeMNLREKLLANKPKITPIIINGENYYIREITVGEMNRVLYGQQQELVHIAESQGIELNFNDEKHLTEQLAKIYDPNRLTRTLAMRLCDQDGKNLFDMDNPDDLTALSKLDKVVFEQLTQAIVEDEPKNSQAEESSK
673579..673803                     phage protein; NF38_03410                                                            N/A                 HaemophilusinfluenzaeMPERHLQEYEIFYQEQPFGLWREDYRTAQVSHLLAMINRDPKSKPPELSDFMPFYQEKMDDEDDDGVADYLANR
673872..674255                     diaminopimelate decarboxylase; NF38_03415                                            N/A                 HaemophilusinfluenzaeMKQEWEVILQDPLLNWLETLAEDDVLKIYAALELLSTEGPQLSRPYADTLQGSKYTNLKELRVQSKLSVFRLFYIFDPVRQAIVLCGGDKKGKKEKLFYKEMIALAEQTYDDYLSELTKEQENEREI
674239..674541                     Cro/Cl family transcriptional regulator; NF38_03420                                  N/A                 HaemophilusinfluenzaeMSVKFKDLMNNLPAEKQAKVKAMADDMRMELQLYRIREELELSQKQMAEALSISQPSVVALEKRGNDIKLSSVKRYIEAMGGVLNLSVELPTGKTVTFNL
674599..674793                     hypothetical protein; NF38_03425                                                     N/A                 HaemophilusinfluenzaeMLIALGTLFLLFAVDFIYILAFIGVYVAIFATCLVVAIIKENNRIKKLRIVEQDKNRVKYVIIN
674845..677985                     PHAGE_Pseudo_JBD93_NC_030918: loader of DNA helicase; NF38_03430; phage(gi100045)     3.81e-54            HaemophilusinfluenzaeMSSLGSLNILLSLDSIQFNQALDKSSYQTQKFAKQFELNFTKAQAKAKQFSERTTQYLNNIEKAANTINKTTSRTFWAGIVSSGGSYLSSGISDVIKYADSYTELQNRIRLVTNSQTAMVAATESVFDISLKTNQAVGATAQIYQRFAQNADRLNLSQLQVSELTETVAKSVAISGASAGAAEAALMQFGQSLASGIFRGDEFNSVMEQTPGLADAIAKGLGTTTGELKNLAKAGQLDIHTVIQALVKARDTVDNDFNKRVKTLSMSFTNLETSITKFSGEANSALGVTQKLATGVDFVSDHLQELIIGLGSLTAALAIGHLSKYGLELLKTGYASAKNALAHIAEAKAIAIKATAMRTAAQVEMASLNAQFKLAQSEQTRFALRERMKVQSAQIIALAQAEATAKRNLATATNLATMAAKGLQSVMALLGGPAGVIGIAATSLIFFSSRAAEARQWALDTTTANQGLAESYNELSEAALSLKVEKQLEDIEKYYKEIEKAKASAKSKNINGDFDGFTVVNSISDKELEHLQNEIKSIEENASLAEKALVKMLAPLAENMLRAGKSLDDVRQKFKLLGVDAVTANNIIANLPKSFSGAANGAKNATDKTLDLKDAIDKLNGKSTMLAQKLEVAKLKQQGQAKSAYVLAGLYELLGKEGAEYNEVLIGIATGTITAANAADKAVGLSVETLKKILDGKAQLEQDFTKENQINKIETSLKENGRQSKGSKTDYVKQFTSDNSEKLRAMEFELTLLGKTRQEQELIQYNHQLDLEAARLKNGMSQKNIAKLDEEIAKLKERRRIIQQQTEESRGSAILGFQQGMKTIEDQVSDVVGNISNITVNAFNGMSDALTDFIMTGKTDFNSLAKSIIKDIVQMTTKMIIFASLKAAFGGTSFGKFMGFSGGGLVPELKYTGGLVGFDEGGFTGIGGKYTPAGIVHKGEYVITKEATARLGRGFLDHLNYGSVRRGFANGGGVGVPRLPTMAYQPKSSGNIAVKVINNGEPMDATVSQQSRNGQLEITVELVRQIAQAEAGTMLQKNMRPGGLLS
677994..678326                     PHAGE_Stx2_c_1717_NC_011357: minor tail protein; NF38_03435; phage(gi209447191)      1.95e-21            HaemophilusinfluenzaeMALKTLSWCPQPKYTVEEEPRRKVLNFGDGYQQRMVDGLNPLLRKFNLTYKLNHKSAVEFDRFLTSHGGVTAFFFREYENGDLIKVVCPKWSKTVTKRHTEISCTFEEVV
679071..679448                     PHAGE_Entero_ES18_NC_006949: gp20; NF38_03440; phage(gi62362233)                     3.65e-15            HaemophilusinfluenzaeMKKLLLIAGLGAILAGCAQLTQEQIKNADYGQYPTNYERIVKEYYETVAKDPDSLKYKEISTPEKSWVNDFGDHKFGYMSCVTVNGKNSYGAYVGYETDGILIKNGKVIHIINNIDQYNRDFCKK
679802..680689                     PHAGE_Aggreg_S1249_NC_013597: hypothetical protein; NF38_03445; phage(gi100037)      5.90e-107           HaemophilusinfluenzaeMSNQISTQTISFNNQSLITVEQNGNHYVAMKPICENIGLTWEPQVLRIKRDEVLSQGMIVMIIPTNGGNQNMICLPIEYLNGWLFGIDINRCNPEIRDTLIKYKKECYQALHDYWFNGKAERKTTVDDRTGLRNAVNMLVSKKGLIYSDAYHLIHQRFNVESIEDLTLEQLPQAVEYVHRIVLEGELITEQKKDKLFTREFTEHDLQQLVWAWFALLRGTELCQVLHPALKQIGSHYAASVYGVAYEYRSTLRQAHNVLTRITEQFECEQGNNWHVLKYLRAYNPKATGFQLDIL
681106..681624                     PHAGE_Entero_UAB_Phi20_NC_031019: ssDNA binding protein; NF38_03450; phage(gi100044)     8.96e-36            HaemophilusinfluenzaeMQTLTAEFLGKEVTLVDNNGVAYVAMREIVEGIGLSWGTQSIKLNENSKKFNCFHIETVGADGKNRQMLCMPIKKLNGWLFSINPNKVRADLKERLENYQEECFLALWDYWTEGIARRDEVKNKLALWQQKKAEYTQRAGERGKLLQQCKSEKQDLERELLQIKQLDLFVNL
681668..682318                     PHAGE_Salmon_SSU5_NC_018843: putative minor tail protein L; NF38_03455; phage(gi410491427)     4.23e-48            HaemophilusinfluenzaeMSIYGQLQQYASHGWIELFELDLTKFGDIVYRFHDGLNPLGQAIVWQGLEYTPYPVKAEGFAVDGLNPVRPRITFSNLGGAITLVLAKLKGIEGARLTRKRTKIIYLDAVNFENGNLTADPNAHLPDDIFYISQKTSEDHLTVSFELLPATDLEGVKLPRRQIVAQYCTHKYKGQFCGYTGDKATCAKTLADCKAHFGEHSELPFGGFPSAAYMRI
682320..683027                     PHAGE_Burkho_phiE125_NC_003309: putative tail component protein; NF38_03460; phage(gi17975180)     2.59e-61            HaemophilusinfluenzaeMKHIDDAIAHAKQSYPRESCGFFVLKNGKLQYVACTNLAAETEDEFLIGIEDYARAEGVGEIRTVVHSHPDESCLPSIADQDAHKMSGLEWCIIGLEGDEVSTHFMPALTEVPDLYGRKFIHGMTDCYGFVRDWYRQELGINLPNYNRIDGWWDNGGNLYVDNFEDAGFYPVKDLKIGDMIVMQINANVPNHAGVYLGDGLIGHHLYGRLSSKDVYGQFYRERTTHIMRHKENTP
683065..683685                     PHAGE_Edward_eiAU_NC_042029: DNA topoisomerase II large subunit; NF38_03465; phage(gi100005)     2.87e-31            HaemophilusinfluenzaeMAVKTPAEAIRALCVLKRGFKEFLLESEKHGIVYRFLVQREELTTSSDEFQMRYGAQAEFHLIPIIRGSKRGGFFQLIAGAAMIGLAFWNPLGWATIGGTGFLSSAATLPLTIGASLVLGGISQLLVPVPKVSGPQERPENKPSYLFNGAVNTTEQGQPIPLLYGELIVGSAVVSAGLTDKEIPIRTNSTSNNETRGKLKFKRVSG
683689..687339                     PHAGE_Burkho_phiE125_NC_003309: putative tail tip fiber protein; NF38_03470; phage(gi17975182)     1.14e-154           HaemophilusinfluenzaeMQIVGRKGGGKGGGGGGRAPVEAPDSLKSCSYAKFIDVISCGEIEGPVNGLNSVYFGDVQLQDEKGKFNFNNVAIEWRPGSVRQAPSEICQTNEVTTDVNTEVKKDKPITRSIIAPEADIVRVTITVPGLSHQNKSNGDINGTKVELKVEYQANGSQWIDAGNIVIEGKTTSSYNREHSFRLTGEAPWNIKVTRLTDDSDSQVLQNKTIFSKITTVFEEKLTYPGVAYVGVQIDAEQFSSIPSRGYHCRGIKLKVPSNYNPETREYSGDWDGTFIVKYSNNPVWIYFDLLTNEEYGAGEYIKEDMLDKWSMYQIAKYCDELVPDGFGGREPRFTCNVYIQTKQEAFKLLRDLTSVFRAMSYWSSGTQMLVQDSPKEPIYQFNNTNVIGGKFSRSGSNIKTRHNVVLVTWNDPKKYFKQSVEYIEDSEAIVKMGYISQTEVVAFGCTSRGQARRLGKWLLYTEQYESEVITFSCGQDGAIPIPGEVIQVSDVHRSGERRGGRVKDGSTVNRIILDAEVEITKESTISIVNEKGELEQRAITQRGKLTEIEVNPGFTSVTENSTWIIASSDIKPELYRVISIVESDDGSYTITASDYNPSKFEHIENGNELIEYDTTNNTLDTGVKNVVITDEIYRGLGGSIQTKIVVSYEPATSLTSRYQIEYREGNGNWKQMEPTTLTSVDIPNVKDGVLYQIRIKTSNVLGVWSDNPIQNYEPIGRLRPPHNVSNLRHKAIAQEGAFLIWDLSPDIDLEYYEIKKGDTYKSSKPVGKIKANEFNLGFIRAGEHKYWLSAVDSSDVRSESPTAVTFNISGGQVENLVAEIVGDEVLMTWGETKNNSFSTELYEVKKDDDVLALVKSTSFKFKADFNGNKKFTVTAIDLGGNRSESAQAQLIVHRPTPVSISQQVIDNYVMLRWQSAKATLPIVYYELRKGETIENSEFITNIDGLAFPQFETVGGLYKYWIIGVDSAGNRSEPQYTLSNVAQPPDYILKYDYNSSYDGIKNGSDKIDGKLYLPVRRDTWAEHFRSNNLATPKSQINRGFPLYLQPIDESGYYEEEMDYGTVLASSKITLTPKVISSGSYDINYHIAVKENAKDNWREHDQQSVYETNFRYVKFRITVSNAQKPVVIESLNLKLDQKQKTDGGTVQANASDIKGTWVNFATEFIDASVPVLTPQSKQPLFATSDFKDEPKPKGFYVFLFDKNGNRVSGKVGWVVKGV
687536..689158                     PHAGE_Haemop_HP2_NC_003315: tail fibers; NF38_03475; phage(gi17981847)               0.0                 HaemophilusinfluenzaeMATEYKLPVDYNSLKNKPLPNSAVDDESDTKFASSAAVKTAYDKAAEAKEAASAKQSPATTLAGYGIGNFKVEQGQGDANGYKTDGNYYLASGQNLPENGEWHIEVVSGGATNAVRQIARKANDNKIKTRFFNGSNWSEWKDAGGDGVPIGAVVSFPRSVTNPVGFLRADGLTFSQQSFPDLYRTLGDSNQLPDLTRSDVGMTAYFAVDNIPTGWIAFDSIRSTVTQQNYPELYRHLVGKYGSLSNVPLAEDRFIRNTGNGLNIGQTQSDEIKKHVHKVRTHWVNSSDSNVFYDKTKTVIDSRLRSATVTDDNLGDNGFMHPLLDSPMATGGAETRPRAIALKLCIKAKNTFDDVQFWVKAFGVVENAGILDAGTLVQNMQALSARVEQKIKENKQSTLLEINNAKADINQKFLQAQESLSQISTLKTVWQGNVSSGRIDISEKCFGKTLILYLQSSESHSLDDNNNIEPVSFEVGAEIEGKRGGGVYFSSIRQVIPHNSGGTRVYHVEVKKFAVTVDRNGTTIHIEELAGRFVKRIDIR
689170..689772                     PHAGE_Haemop_HP2_NC_003315: tail collar; NF38_03480; phage(gi17981848)               1.91e-124           HaemophilusinfluenzaeMKVYFLKENLNSYQIFPIPQNLNDFVEMEVENESELETKQLIDFKSQYILVDRQPTELHIWNGNSWVIDEEKQTEIKRELIKRLVDSIDDTAASISAKWTRFAEEYKERESAALAFKEANFTGEVSIYISSFATVAGLDNKSATLLILKQAEGLRTLQEQLAVQRMRKYELKHEELSEEELQQIHNDIIRKMKALTEVQQ
689769..690227                     PHAGE_Haemop_SuMu_NC_019455: enoyl-CoA hydratase/carnithine racemase-like protein; NF38_03485; phage(gi418489075)     1.96e-53            HaemophilusinfluenzaeMTEGKVYLALYKGKKTGWTPKAILARLSDWLTRKLTKGLYSHCEIVVNKGFKVCYSSSIRDGGVRSKIMYLEHEKWDLIELQNITEERIKAYFEQTKNMRYDWWGALGIVLGIKQKRSKYFCSEWCFNAICGGENGWRFSPNQLGAMFKHDD
690717..690733                     attR                                                                                 N/A                 CGGACTCTTAATCCGTC

#### region 2 ####
complement(1286089..1287099)       PHAGE_Mannhe_phiMHaA1_NC_008201: portal vertex protein; NF38_06260; phage(gi109289937)     1.99e-152           HaemophilusinfluenzaeMSKKTKKSTALSTGNQAQAFSFGEPIPVIDRAEVLNYFESVVMYEKYYNPPINLSYLAKALNASAHHNSAITVKKNILLSTCKTTALLPRTQLEKLVQDYLVFGNAYVEKTVNSFGKVVSLKSSLAKYMRVGVETGVFYQIVNGFDEYEFKKGSVFNLINPDVNQEIYGVPEYLAALQSAFLNESATLFRCKYYLNGAHAGSIIYMTDPTQNKDDIEAIKTQIRQTKGTGNFKNLFVYIPNGKKDGMQVIPLSDAIAKDDFLNIKNASRDDVLAAHRVPPQLMGIVPNNTGGFGDVEKATRVFFINEIIPLQERLKEINSWIGEEVITFSDYKLLN
complement(1287109..1288890)       PHAGE_Mannhe_phiMHaA1_NC_008201: terminase ATPase subunit; NF38_06265; phage(gi109289938)     0.0                 HaemophilusinfluenzaeMDEQVINQPSPEVTVEIKRKAQQMYFSGYKIAEISRQLNTPASTIASWKDREKWDDIAPVGRVELALETRLNLLIAKEEKSGSDYKEIDLLGRQMERMARVKKYSFGDGNEVDLNPKLANRNKGERKKAEPNAIDQEQEELLINGFLDGMFNYQRIWHKAKEHRIRNILKSRQIGATYYFAHEAFIDALTTGHNQIFLSASKKQALQFRSYIVNYAKQTADVDLKGETIKLPNGAELIFLGTNSATAQSYHGNLYFDEVFWVPKFDVMRKVASGMAAQKMYRQTYFSTPTTIAHPAYAFFSGKAFNRNRAKSEKIEIDISHENLKSGKLCADRQWKQIVSIYDAMEGGCNLFNIDDLIAENSKEEFEQLFLCQFADDNSSAFKFSDLQLCQVDSLEEWHDYKPFYQRPFGNREVWLGYDPAFTGDRAALVIVAPPKVEGGDYRVLHKQTFHGMDYETQASRIKQFCDDYNVTRIVIDKTGMGSGVYQEVRKFYPMAQGLEYNADLKNEMVLKTQNLIQKRRLKFDSGDNDIVSSFMTVKKRITGTGKITYVSDRSEDASHGDLSWAIMNCILNVPYGLGGDVSSNKSTIFTFE
1289055..1289879                   PHAGE_Mannhe_phiMHaA1_NC_008201: capsid-scaffolding protein; NF38_06270; phage(gi109289939)     1.90e-91            HaemophilusinfluenzaeMAKTSKWFVVATEGATTDGRTINRTWIEQMAANYDPKKYGARVNLEHIKWRYMWNDDPHSKCYGDVVGLKTEENAEGKLQLLAQIDPTDDLIKLNKDRQKIYTSIECDPNFADTGEAYLVGLAVTDNPASLGTEMLVFSAGASANPLNNRKEKAENLFTAAIETELEFEEVKEKGLSVFAKIRALFADKEKTDNERFADQTQAIELLAEQTKETLEKLTALSDDLAKQKAEIEEMKASNAEIQATFAELQKPVEPENPRPLVYGEQPETDGRFF
1289900..1290949                   PHAGE_Mannhe_phiMHaA1_NC_008201: capsid protein; NF38_06275; phage(gi109289940)      3.66e-115           HaemophilusinfluenzaeMNKFTKQKFNTYLAGVAQDNGEDVAFIANGGQFTVEPTIQQKLENAVLESSDFLKRINVVMVQEMKGSALRLGVLSPVASRTDTNTKARETTDIHSLQENTYSCEQTNFDTHLNYPTLDSWAKFPDFAARVGKLKAERIALDRIMIGWNGTSAATTTNRTSNPLLQDVNKGWLVQIEDKAKARVLKEIEESSGKIEIGAGKTYKNLDALVFALKEDFIPAQYRDDTKLVAIMGSDLLADKYFPLINQEKPSEILAGDTVISQKRVGGLQAVSVPFFPKGTVLVTSLDNLSIYVQEGKVRRHLKDVPERNRVEDYLSSNEAYVVENYEAVAMAKNITILEAPTPISPVAA
1290961..1291611                   PHAGE_Mannhe_phiMHaA1_NC_008201: terminase endonuclease subunit; NF38_06280; phage(gi109289941)     2.58e-57            HaemophilusinfluenzaeMRPTKRHFLEVSAAIANAAETEDLSDFTEYEKMCRILARHRKDLKNIQSTERKGAFKKQILPDYLPWIEGALSVGSGKQDNVLMTWCVWAIDCGEYHLALQIADYAVFHDLRLPEPFTRTLGTLLAEEFADQAKAAQAANKPFEVAYLEQVQRITADCDMPDESRARLLRELGLLLVEKHPEQALAYLERALGLDQKIGVKGDIKKLKKQLSATEC
1291905..1292411                   PHAGE_Mannhe_phiMHaA1_NC_008201: head completion protein L; NF38_06285; phage(gi109289942)     9.25e-46            HaemophilusinfluenzaeMSDGAISVKLAPDYEMGEVQQQLNDYDTSDDIISNDGFFPDMSLSQFRNQYRADGTITTQRLQDALIEGMASVNAELSTFKTQSKRDSLEQIIAPSINGESVLIYRYKRAVSCLALANLYERYASYDSTNDGEKKMAQLKDSIDELRRDARFAISDILGRKRVDAELI
1292411..1292620                   PHAGE_Mannhe_phiMHaA1_NC_008201: tail synthesis protein X; NF38_06290; phage(gi109289943)     1.70e-15            HaemophilusinfluenzaeMQVYAQQNDNLDAILYRHFGRSEGLLEITCELNPHLMDKPIIPIGTPVILPDADTEKISVANDTIQLWS
1292622..1292843                   PHAGE_Mannhe_phiMHaA1_NC_008201: possible holin; NF38_06295; phage(gi109289944)      1.17e-06            HaemophilusinfluenzaeMHDAPSKASYTSGIFAFLIGRIADMFSNVNWADVASITGIVIGVATFLVNWYYKKKDFELKEKELKQRIHHHD
1292836..1293354                   PHAGE_Mannhe_phiMHaA1_NC_008201: endolysin; NF38_06300; phage(gi109289945)           2.25e-47            HaemophilusinfluenzaeMIKRSAKYICAISAVVGLVIASHGNEIRTSEKGLLLIGNAEGCMKKPYQCPADVLTVGIGITDAVEKIDRNKIYTLQEIAELYVKGIKQSEKCVNQYANGKTMPQGAFDALVSITFNVGCGKLKNSSLFKMARQGYSKAMCGQFERWIYAAGKPLKGLIERRQKEKNLCLIS
1293339..1293689                   chemotaxis protein; NF38_06305                                                       N/A                 HaemophilusinfluenzaeMFNFLTAKERGIFLIGPILLVLLIVFLGFKANYWRKEMLKEEQLKLKWQNAYIELNHSVQNFAEQQAQLIQAVNNLKANQNQQTQDLKNVLKSNQDWANRPLPDDVKRVLNSAGSH
1293864..1294079                   PHAGE_Mannhe_phiMHaA1_NC_008201: DksA-like zinc finger domain containing protein; NF38_06310; phage(gi109289947)     1.65e-16            HaemophilusinfluenzaeMTDQFDRAQQLEEMQREIALKKHRTFKAVSRLYCEDCDAPIPEKRRQMIQGVTRCVTCQQRFEIQQRNFRK
1294076..1294339                   hypothetical protein; NF38_06315                                                     N/A                 HaemophilusinfluenzaeMRRTTLFLAIAAALPCLANTYTVPFRDGPFGKYSNYPDGRITEVCIHQVGYLMTDTGHLIVAVDKDNRPLICRDTQNEKAQPTAQNP
1294305..1294775                   PROPHAGE_Salmon_Ty2: putative phage tail protein; NF38_06320; phage(gi29143748)      5.93e-40            HaemophilusinfluenzaeMKKPNQLRKILEQSHPDFVKNPDHLQLYVDGGQIVATGAASFSFEYRYTLNVVVTDYAGDIATLIVPMMAYLRTNQPEILENPQIRENAFKFQIDYNNNNTADISFEIQLTERVVSKKDGNNVQIHYAKEPVWDEPNRVKVYLENRDSPIFEGDTV
1294775..1295236                   PROPHAGE_Salmon_Ty2: putative phage tail protein; NF38_06325; phage(gi29143749)      6.42e-34            HaemophilusinfluenzaeMATVEEVQAKLTALIANLSPQARRQLGRKIGQALRKSQSNRIARQQNPDGSAFEPRKPRKEFGKKKGRIKRKAMFAKLRTARHLKVRSNGNEVSVGFNGSSAAIAAVHQYGLTARPSKEKDFKVRYAQRELLGISEQDLSMLNELVIEQISKS
complement(1295237..1295584)       hypothetical protein; NF38_06330                                                     N/A                 HaemophilusinfluenzaeMKNKRTSRTLIMLNIAMWSLVIISTCLHYQFNPFSFIWFDVIAPVGHFFAVVFSALSSFTVSMYELFKPETFWGWVWFVMFVVPIICLPLYVVLLVLFAGKLSHHDTVVPPSYLK
complement(1295881..1296192)       hypothetical protein; NF38_06335                                                     N/A                 HaemophilusinfluenzaeMEIFVLLIGLPIIVGLLIAFGTAVLAAFSYIFVGALSLAINFWYITLAVMLVLLAPLIYLNSWLFWILAALVIFFTVAWFFGGDTEQIKAEIERKRIAKEHKL
complement(1296446..1296706)       hypothetical protein; NF38_06340                                                     N/A                 HaemophilusinfluenzaeMIAILSLFILFVGLLGLAIGFGVIAVPWFVSLVIAAPAIFIYMLMIGSVLWLVEVNFFLGMAALVVYAYWIHIIRKHLKSKGLISQ
1296777..1299584                   PHAGE_Pseudo_PPpW_3_NC_023006: putative tail protein; NF38_06345; phage(gi564292502)     7.45e-113           HaemophilusinfluenzaeMNNLQLTVLLNAIDKISAPVRSASKSVNELSAKLKESKSIHRQLNQQNKQHQAAMKQYASTINPLKSKLDSLNQELEQAKQKAASYAQYMKNAQHPTAGLQKEVEKAKSAVKKLKQEQIDAANKLQQARQELAKSGISAEKLAQKQRELQKNTKSATDQIKNQEAALKKLNAKQAAYNQYRGQVETLKSISGKAQIIGAQASAAGTTITAPIVNSIRDFMSFEDVMAGVARQVPGLKDKFGQFTPKYDEWKNKIKQLSTELPLTTNQIGDMVTAAARMDIQENELEDFIRLNTQMATAFDAENPDELVELFGKVQKNFKLTTKDAKELADTINYLDDNAISKGTDIINFLNNTSGIGNLVKISEKNLAALGSTLLTAGNEASTSAKAIESTFNRLSKATRMKPVNNGLKALGLDPKAIQKAMVKDAQGTLMMIVEKIKKLPKHLRAGVISDIAGGNYNTQLAGLVANTEEWRRQIELANSEEAKNSMAREFQTRMTTLSAKWQLFKNRLFNVNSSVGASLKDTMTSLMDGVGYLLDKIQTWIDKHPKLTSTIAKTAAAIGGSLSLLGALSLALSFILYPAARLFLGLSKLNVILPKFSGHLSSAGRLILRGLLSPLKLIALAISPLGIALLTLATLIYKYWQPIKAFFGGFWEGLKSGLAPVLEKFQPLGTAFGVVVGWIEKAVKWFTDLLSPVQSTKEDLEAATSAGKKFGNGMAKAIEFILTPLTRLMDGIKWISENMPSWEGIKNSVSSAWESTKNTSSNAWQSTKETAGSAWQSIKETAGSAWESFKDFTGFGSNGKKLPSQNWSGGYTGNGGKYEPMGIVHGGEYVMTKEATSRLGVNTLNALNYGKRALIAGGLGISVATAAPVQVDTRAPIFARPMMTQTSQPMSVNITINAAQGMDERAIAQQVAKQIQRIENQRQARARSSMWDRA
1299806..1300258                   hypothetical protein; NF38_06350                                                     N/A                 HaemophilusinfluenzaeMLERKHIKFVEIHHLFTQISLALGFTEQDIDKHSTNLAELIALWQQQEFVEVYVENKDRLFGRAKDSSLAYGASPYYIGLYHARLSYEENDPLVVLTFNYEDNPEQTTVSVRFMVDHDTLFGTKEEKFIQQRMKDIRKRIDDFIQLGNKK
1300356..1300913                   hypothetical protein; NF38_06355                                                     N/A                 HaemophilusinfluenzaeMTNLSLNPIFESFAPIFKQLKTVAMSALFIAPLAINHPVRHTTHTVNIFSVQTDENKSINQQDIEKIIDMVKAVSAITDFVIASITAESLSYIDLSDVLRLESKINKYDDLANNIMVNNKTPELSTTLQSFSNKMHTLCNMMKSEKYKQQSDEVVLSRLYRKSEDAGYTYKSSHSFDDFKKAVMM
1300922..1301350                   hypothetical protein; NF38_06360                                                     N/A                 HaemophilusinfluenzaeMKIELSKQFQEGRLNTPFFKDIQAMSDEELQLIFDFMQSIKQGKLLRGKNKPSWLDDNLNDIPNTEVYQQNEIWHYHCGPYNKGSRYCPMSGLKINLNGETSGPVIHYQKISDEHIVIIAFSPQHEPFPREWDTPNPIIDRA
1301454..1302053                   PHAGE_Mannhe_phiMHaA1_NC_008201: baseplate assembly protein V; NF38_06365; phage(gi109289954)     1.50e-78            HaemophilusinfluenzaeMPMSAELQRKLDNIIRFGVIAEVNHATARARVKSGDILTDFLPFVTFRAGTTKTWSPPTVGEQCVMLSVSGEFTTACILVGLYTQNSPSQSPDEHVIEFADGAKITYNQSSGALVVTGIKTASITAANQIDIDCPAINIKGNVNIDGSLSTTGTSTTKGNISTQGSVTASGDIKGGSISLQNHVHLEQGDGQRTSNAKA
1302055..1302393                   PHAGE_Mannhe_phiMHaA1_NC_008201: baseplate wedge subunit; NF38_06370; phage(gi109289955)     1.10e-27            HaemophilusinfluenzaeMNRYTGETLKNESDHIKQSIADILLTPVGSRIQRREYGSLIPMLIDRPISHTLLLQLAACAVTAINRWEPRVQITQFKPELVEGGIVASYVARSRKDNQEMHNEKLFLGHKQ

#### region 3 ####
complement(1418021..1418197)       PHAGE_Aggreg_S1249_NC_013597: hypothetical protein; NF38_06840; phage(gi100023)      2.00e-29            HaemophilusinfluenzaeMKFTDKTTQAATQRTITKDGFLVVPATISKVGVFDYLATELGLKEDGIKKVARTEKSL
complement(1418338..1419519)       PHAGE_Aggreg_S1249_NC_013597: hypothetical protein; NF38_06845; phage(gi100026)      8.54e-111           HaemophilusinfluenzaeMTDDVERAMQQPQGSFFMDDAKGFQAISAKALMKVLEKYEKSDRTSQAENIANGFVGRGDAQNHAEVSTNLKNQTGIDLSAYLRNSPNIAERVNALTAGNIQLIKSIRSQYLDKVQNTVMQAMVRGSLNKDLAAQVKDLGKTTEKRAMFIARDQSSKLNAALTQARHEEVGIKKYMWSTSGDERVRESHAEKDGQIFEYANPPADTGHPGHDVNCRCVQIPVLDDVVNLKSEETELSYQAAEPNKTGKMDLDELFESSIGGGGNKSFSNFGGVNSELITLAKESIGLDITDWQHSIDESSIRHILKQHGNEKAENKRGQRAVTKKDILLLPLVVSAFDSIEYTGTSDSGNETFLIKKEIDDEIFSVQEVRKRHKKIAVKTMWIKRKKKATSSA
complement(1419548..1420882)       PHAGE_Aggreg_S1249_NC_013597: hypothetical protein; NF38_06850; phage(gi100027)      0.0                 HaemophilusinfluenzaeMNILDGIKSLALKLGSKQDQTYYARGLSLTDDLMQIEALWRDNWIANKVCIKRSEDMVRNWRDIFSNDLKSEQLDEFTKLERRLKLRETLTKALQWSSLYGAVGLLLVTDTINITSPLQPTERLKRLIILPKWKISPTGQRDDDVFSPNFGRYSEYTIIGGTQSVLVHHSRLLIINANDAPLSDNDVWGVSDFEKIIDVLKRFDSASANVGDLIFESKIDIFKIAGLSDKISAGLENDVAHVISAVQSIKSATNSLLLDAENEYDRKELSFGGLKDLLTEFRNAVAGAADMPVTILFGQSVSGLASGDEDIQNYHESIHRLQETRLRPVLEVLDTLLCNELFGGQPDDWWFEFLPLTVVKQEQQVNMLNTFATAANTLIQNGVVNEYQVANELRESGLFANISAEDIEEMKNVNEFAGNFEEPENTEDAQVQASEDEQENGALV
complement(1420884..1422227)       PHAGE_Acinet_AbP2_NC_041998: hypothetical protein; NF38_06855; phage(gi100055)       5.17e-159           HaemophilusinfluenzaeMSQLNIQFPTKFRPLFESIWPFIIFYGGRGSGKSFSIARALVLRAYQSPVRVLCCREIQKSISDSVIQMLADQIEMLGLQNFFDVQKTQIIGQNGSRFTFAGLKTNITSIKSMTGIDVVWVEEGENVSKESWDILIPTIREDGSQIIVSFNPKNILDDTYQRFVIHPPERCKSVLVNWQDNPYFPKELMEDMEQMRERDYELYRHVYEGEPVADSDLAIIKPVWIECAVDAHLKLGFTAKGMKKVGFDVADEGADSNDNAFVHGSVVLDIEVWKNGDVIDSANRTNQSAVKFKADLIIFDSIGVGAGVKAHFKRLPKSLQVEGFNAGGAVAYPEREYIKGKKNQDMFSNIKAQSWWALRDRFYKTYRAVKHGDVYPDDELISLSSNIKELEYLKAELSRPRVDYDNNGRVKVESKKDMKKRGIPSPNMADALVMCYATTKPKSLLDL
complement(1422214..1422726)       PHAGE_Acinet_WCHABP1_NC_041966: late promoter transcription; NF38_06860; phage(gi100046)     5.89e-29            HaemophilusinfluenzaeMSDVKGKSTSGRGLTPKQEKFCQLYIELGNASEAYRQSYDCQDMKSESINRLAKKELDKIKIRSRVDVLQQEHRQRHNLTLDNIIADLQEYRDICMGRKPLTITTVVKNAQEGTAQSVNTECFVFEPTGANKALELLGKHLGMFTNKVDVTTDGKPLPTVINVTFSDEPA
1422771..1423049                   PHAGE_Burkho_phi1026b_NC_005284: gp80; NF38_06865; phage(gi38707970)                 1.88e-05            HaemophilusinfluenzaeMNHLLTFYEKIIFTNPLETGIPEAVAKLALLNDYSALRAWREHLGLTQAEVASRLGISQAAYSQHENSQTLRKSTRIKIATALGINSAQLDF
complement(1423051..1423332)       PHAGE_Aggreg_S1249_NC_013597: hypothetical protein; NF38_06870; phage(gi100031)      3.78e-34            HaemophilusinfluenzaeMLNQLKQSLRLNLVLTLVCLSLFLTACTNKITTKPEYIYPPQAYTAPCVKTAFTGETYGDVVIQLVKVTAERDKCASQVDHLNKWINQAKGGK
complement(1423244..1423567)       PHAGE_Aggreg_S1249_NC_013597: hypothetical protein; NF38_06875; phage(gi100032)      1.19e-33            HaemophilusinfluenzaeMTKYIYMALAGVVVVLIGALRYQSSVIDELEITTKQQENTIQQQEDANKSLSLALQQERYAIIEQQERNNEIERIATENAESVKTIIKTQPCAHTRLPQSVLDRLHE
complement(1423560..1424162)       PHAGE_Aggreg_S1249_NC_013597: replication and recombination DNA helicase; NF38_06880; phage(gi100033)     3.82e-71            HaemophilusinfluenzaeMTMMISEVTFNKIFPHAVKGVYQAISAQIEKAGCVNKMQQAMFLAQCGHESGGFTRFKENLNYSWLGLSKTFRKYFPDPLIAKKYERKPELIANRVYANRLGNGDEKSGDGWKYRGRGLIQITGKDNYAAFRKWLGRDIEPDDVAGNLDLSVKTAVWYWKCYELAELNSVEKVTRRINGGLNGIDERCKLYRALMVTDND
complement(1424131..1424487)       PHAGE_Pseudo_MD8_NC_031091: dihydrofolate reductase; NF38_06885; phage(gi100060)     3.91e-07            HaemophilusinfluenzaeMPIKEPDVWALIWSWLQTNLSSSSAQSAFWALFISLLRFGFMRKKPAIRYVLIDAAMCASIAGVAVPICTHLFGHTEYSSFLGTMIGFVGTEKIREFLFKFINRRIEKDDNDDFRSDI
complement(1424824..1425492)       PHAGE_Aggreg_S1249_NC_013597: hypothetical protein; NF38_06890; phage(gi100056)      1.66e-86            HaemophilusinfluenzaeMTTQIQFSIFNFKNSPVRTITDPNSEIWFCGTDVCDILGYVNAPDAMKKHCKEAGIAKRYISYPSGRKEAIFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQLALPEPEKKFSFEFTEYELQQLVWLWFAFMRGIVTFQHIEKAFRVLGSNMSSQIYGQAYEYLSVLRSTNQILNRITSDFDIDQMTNWRVLKHLRGFNPKAVKIDF
1425850..1426815                   PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NF38_06895; phage(gi157166018)     4.49e-116           HaemophilusinfluenzaeMVSTSLTAEKRKERAEKAALARWEHKKALEELPLAIHEGVLSIGDKSLDVAVLQNDLRIISSASVFEALDRPNRGSRGGAITENEELIKLPAFMDANNLKPFINQDVIDVIKGVKYRTKDGKIKEGYDATILPVVCDIYLRAREEGALVGKQQNTAQKAEILIRSLAKVGIVALVDEVTGYQDARAKDALAKIFEAFVAKELQPWVKTFPLDYYKELCRLYGVQFPPKNNNQFPQFFGHITNNAVYARLAPELLPELKKSASKQAKKVKLHQFLTEDVGHPKLREHLSSIVTLLKLSKDKDNFYEMLDKIHPKLTLQEGQE
complement(1426865..1427236)       hypothetical protein; NF38_06900                                                     N/A                 HaemophilusinfluenzaeMNIDVISVEFGYWATPRYETEFPRVAAGFAEMKCDARYAEKYRMRPISDELGMEIDGYLGVIRKVTPELYDVFVLTYIKRWEKQEIWRYLHISRREYFNRLKTVKTSLLLLLSTEGKQCLFIA
complement(1427267..1427932)       PHAGE_Strept_BillNye_NC_042105: RNA polymerase binding protein; NF38_06905; phage(gi100043)     2.25e-05            HaemophilusinfluenzaeMKCKIDGCNREAMYKADCVCQMHYFRFMRNGTYDLLPKPIRKYRRHNGKGYQLIFEPRHQLAMSDGYVYEHRFVIYSIYQNNLPNCKLCGCKLTWSSCHIDHIDNDITNNTLENLRPICRACNVMRSHTLIPKYTHKGHSKITFNGLTMTAAEWARQDGVTVAGNTILRRIRDGWSIERALFETSSTHPNAAVKHTTTKYKNRFEVKSTGISLDLRLQGDD
complement(1428562..1428978)       PHAGE_Aggreg_S1249_NC_013597: RNA polymerase binding protein; NF38_06915; phage(gi100043)     2.05e-85            HaemophilusinfluenzaeMSQYKPFFLRDQRIKNNCLDLIKELPIDDKKALVVKIQPITRSLEQNSKLHALLSDISKQCEFNGKKRDIDTWKMIMVSAHKIATGGQAEMVIGLEGEVINLRESTAQMSVKRLASLIEYITSWGVQNGVRFNDRWGL
complement(1429015..1429239)       PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: hypothetical protein; NF38_06920; phage(gi971749649)     2.81e-13            HaemophilusinfluenzaeMTSYKCPKCGAELEDFYTPDYFISSSEWDDDRFRCNGHLIEPIPFPQVSKYSAVNRTKSCGYFGLEDLGVEYKE
complement(1429236..1429871)       PHAGE_Aggreg_S1249_NC_013597: loader of DNA helicase; NF38_06925; phage(gi100045)     4.41e-25            HaemophilusinfluenzaeMANSITQNQINTLPPERTQRAEETINWLFQELKSIFPGWRAAFETEADYLSAKKTWLRVLVREKITRPQLENGICEAEKSLDKFLPSVGLFVYWCKAYDYHALGLPNEAELYQRYNTFLGYARFNRDEFQYRSKVEFWLLKNLYEKCKKKSEEDTLKAIPKLLIEAAEKVRSNFPFEDIPKMIPVKPSFYDKAKADKARDSLMAMMKGVLQ
complement(1429856..1430614)       PHAGE_Aggreg_S1249_NC_013597: late promoter transcription; NF38_06930; phage(gi100046)     7.65e-88            HaemophilusinfluenzaeMSMRLMVQAMNCKVGNPARKLVLLKLADNANDDGICFPSYQYIADKCEMSKRSAISHIDDLIKMGLVTKKARKNKDGSSANLYLLHLEQGSEKSALGGENISLGSEKFALGGSEKFAPITSHSLEPVNEPKKTTQKSESEILLERFGITGQLAKDFITHRKTKRGAISETQLSRLQKQADKAGISICEVVEICIERNWQGFNASWDWRDEKLRPNSPHLGQSHRNKPKFDDTQTGWSAGMNFIVDGTQWQIP
complement(1430611..1431285)       PHAGE_Aggreg_S1249_NC_013597: dsDNA binding protein; NF38_06935; phage(gi100047)     7.53e-111           HaemophilusinfluenzaeMNQLLTISKENTSTLTMSSREIAELINKNHSDLCRSIERLIAKEVIWGYQPMAYTHPQNGQTYYEYHLTKRDSLIVVAQNCPEFTAAIVDRWQALENQQKPTALIPQSFSEALMLAAQLQAEKERNAPKVAFVDHYVEVGTSKSFRETAKILKMPERALVNRLVEDKYLYRQSGVLLPYQSAHTKDLFTVKTGTAEHGHNYTQTRVTSKGIEFIASRYASELML
complement(1431334..1431774)       PHAGE_Entero_mEp390_NC_019721: hypothetical protein; NF38_06940; phage(gi428782704)     1.10e-14            HaemophilusinfluenzaeMEMKKVIIEMVDRIPGGRSAVAGFLGFTESELKNRLYQTKGQRFKNEELIAIQQEYGCTQFIDELCRLAGGRFVPDVAENELDKVELANLQLHELSARGLLFAALETALEDGEITSKEEDKIRQALSKHLAATQHSIECAIVLHKK
complement(1431823..1432011)       PHAGE_Aggreg_S1249_NC_013597: RNA polymerase sigma factor; NF38_06945; phage(gi100049)     8.53e-07            HaemophilusinfluenzaeMLPIEKAYEIVGGISAMARHFNLTPWAVSKWREKVPAERCAKIEELTDGKVKKSELRPDLWD
1432122..1432820                   PHAGE_Haemop_Aaphi23_NC_004827: putative CI protein; NF38_06950; phage(gi31544010)     1.31e-149           HaemophilusinfluenzaeMTDLASRLNELMAKQGKNIVDLQKAVGVTYEMARRYTLGTATPRDNKIEAIAKYFGVTPAHLKYGTVDSLENQVTSNVKDVGSFDLWDRNTPLNSDEYAVPFYQDIRLAAGNGFADDIADYNNFKLRFSKSTLRKQGVQYENAVCVIADGNSMEPVIPDGTTVGIDLGNKTIRDGKIYAINHGGLLRIKLLYNMPNEQVKIRSYNTEEHPDEIAELQDISVLGKVFWYSVLL
