gi|00000000|ref|NC_000000|  Yersinia pestis CO92, complete genome. [asmbl_id: NC_000000].4556337, gc%: 47.58%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
523541..524749                     PROPHAGE_Escher_CFT073: transposase; AK38_463; phage(gi26246249)                     0.0                 MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNTPKSGSNTRNGYSSKTLLCDDGEIELNTPRDRENTFEPQLIKKNQTRITQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRQLDALYPIVYMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSDHL
complement(524970..525389)         PHAGE_Bacter_APSE_2_NC_011551: tail fiber; AK38_464; phage(gi212499733)              1.47e-11            MKKLNKLDSDGFYIEDYIDGYLPKNWTADLVGDGYYKAQYQNADIDPDTGEWTGGVWAETSGPSTIDISAQKAEFVTQAKLKKSKLISDASDRIEILKDRIELGQDRAAELKLWKSYRIALDDIDVSAAPDIEWPLKPE
complement(525400..526317)         PHAGE_Edward_eiAU_183_NC_023555: putative tail protein; AK38_465; phage(gi589889269)     7.48e-14            MAWYRSGTVTSEAAQNIVTGTGTQWANNVMGVAPGMALFIPDSAGNTLIYEILAVDSNTQIRINGNIKESVADSSYAIMTTVSNSYSALARETSAQLAMYQQLLKNWQQITTGTGDVNIIAPDGSVVIIPSLNSLMPKSGGAFTGPVSMFHDATDPLEPVTFQQFKQTGGELATQMTQLASRTTTLEADAFTASRIANTPWIPLTLQNGWLPLQGYHNAIYRKINGVVYMEGVITGGTHADGTVIAILPDGYRPALDQVSVQPISGSTLGGITAQSRIALWTDGALRIYGITGNGDIGIKSSWVI
complement(526334..527332)         PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; AK38_466; phage(gi401817612)     1.02e-22            MAEPILYISPSDGGKGINMTSGTRLLKFLGYYDTNGTGNPPSAVLNGYTGGALYLVPSDFGGVIQPLGSSAVWAWWVTGYSMSGNRITFTTSESNKGWVRFSAFEIPQSPAVGTYGLLLQDSANFMAITESSELGFCTWRGNVNISGVWSIPAGIQNRDNAIVFANWDNPNVSLYYDSANKTINCYQINSTGSTSSGSVNANICVFTTGFFPEPPSPGTAGLAIFNTSGQCTYSSRYAPLIIGGNMALSNQPNVWVNTGITRPMIPLPSAGGLPAGNINNGNYRGWYKSAMRMSGSSITAGQGAYVNSSNTLDYPYGISPISIPVLNADIYF
526687..526698                     attL                                                                                 N/A                 TTGGCGGCTCAG
complement(527332..530535)         PHAGE_Cronob_phiES15_NC_018454: putative host specificity protein; AK38_467; phage(gi401817611)     0.0                 MARKPIKGRKGGGSNATTPVESPDSIQSTARAKILIALGEGEFAGGLDGTNIYLDGTPIKNSDGTSNFTGVTWEYRPGTQAQDYIQGMPNVENEITVNTELKSDTPWVRSITNTQLSATRVRLGWPSLQRQADNGDVGGYRIEYAVDVATDGGAYQTLLDTAIDGKTTTLYERSHRINLPKATAGWQVRTRRKTANANSGRIADKMNVEAISEVIDAKLRYPNTALLYIEFDATQFQNIPIISCEPKGRIIRVPTTYDPVTRTYSGVWDGSFKWAHTNNPAWVFYNIVLADRFGLGHRIEVSQVDKWELYRIGQYCDQLIPDGRGGSGTEPRFTCDVYIQSQAEAFTVLRDLAAIFRGMTYWGNNQLCTLADMPRDVDYIFTRASVIDGRFTYGGGSEKKRYTTAMVSWSDPANNCQDAIEAVSDNDLVRRYGVNQLDMTAIGCIRQTEANRRGRWALLTNSKDRTVNFNVGLDGAIPLPGHIIGVADDMLSGRKMGGRISSVSGRNITLDRVADVKAGDRLLVNLPNGVAQGRTVQVVNGKVITVTTAYSEVPAAESGWSVDADDLAIQQYRVTGISDNDDNTYSISSVQHDPDKYERIDTGARIDERPISVIPPGVQPPPTNVVIDSFSALSQGLAITTLRVTWEPAASAIAYEAEWRRDNGNWISAPRTSAQGFQVEGIYAGQYQARVRAINPSEISSIWANAQETTLNGKEGNPPMPVGFTATGILFGITLNWGYPEGAEDALKTEIEYSLSADGTDAMLLSDVPHPQRNYTMQGLRAGQVFWFRARIVDKSGNQSPWIDWVRGMSSTDTSAILEAIGDDFINNTVAGQQLINDDFMNAEGILETAKANNASIWQQWAQHGENKAGVIHLTTTVADAERAFAEFETLVTATFEDQTAAIDQKMTAVVDANGASATYSLRAGLNYNGQFVSAGMVIGAEFINGVAKSSIGFTADQFILLSGPTGNLFSPFAVVNGQVFMNDAFIAKASIGRGKITDTLDSDNYVQGISGLKLDFKNGNAEFNNVNLRGNITMDNTINGIRTIVDYRGQRTYHANGQPAIICGYF
530711..530932                     hypothetical protein; AK38_469                                                       N/A                 MSKYTISSITELSQLQDLKPPFHTNITVNLRTAAGQTAVSFDPHGMDIMNMTVSEIGEAAYKIFIDRLSANNK
complement(530901..531065)         hypothetical protein; AK38_468                                                       N/A                 MTQEQRIEALEQQVSDMQQQITSIQEAVICYQDLNQLNFNELRAAICCLQKADQ
complement(531107..531703)         PHAGE_Entero_mEpX2_NC_019705: tail assembly protein; AK38_470; phage(gi428765633)     2.59e-72            MTPIKLSGSLAKMFGRDHQRLVGSSGEVIKALCVTIPGFEQYLMTAKQRGLTFAVFKNKRNVGKDELELASGGQEIRIVPVIIGSKRGGLFQTILGVALIGMATFMSGGLAVAFGAGGVWGGAMAMMGASMALGGVIQMLSPQQSGLAMRQSPDNKPSYAFGGPVNSTAQGNPVGVLYGKRRIGGAVISAGIYAEDQM
complement(531783..532133)         PHAGE_Entero_HK140_NC_019710: hypothetical protein; AK38_471; phage(gi428781958)     1.21e-16            MKQIIISLVVLVLAGCSSISEMRERGPHSEFKSKKEAQVLATCITMEWQKFKVVGGGATDVSMSLLPNGFSVFTPNQTEVADVHNIDNGSTVNFFVQTGLFDWRINQRVDGIKKCI
complement(532141..532677)         PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; AK38_472; phage(gi401817606)     1.24e-10            MEIIIAAIFLGLIPAIIANSKGRSFGLWWLYGALLFIVALVHSIVMSSDNKTIEQKQIDNGMRKCPFCAELIKPEAIKCKHCGSDVKPADEVISSNLEYGFNPSDLPFDSFFIRRKVGFDINDHAVMEMVNKLKRINPGMHPMNIQTRYANDFDKLKNKLPSSIRDEFDARYKYWMDK
complement(532791..533798)         PHAGE_Edward_GF_2_NC_026611: putative antirepressor protein Ant; AK38_473; phage(gi764162270)     2.71e-44            MNSLAKSNANNTQTSAISQFHFDTHAVRVLSIHNEPWFVAADLCRVLELSNPTKSIMNLDDDEKALTSIQGLSRGNEEANIVSESGMYTLILRCRDAVKPGTIPHRVRKWVTAEVLPAIRKTGSYDSPRKATKKALPGKITIEQQEAVKQLVMNRGKALPKENQAKAMITMWSALKTHFGCSYKEISEDQFTEALSLAARVTIEGEFLGKQEALPVPKLEVSLPIQWWFDNNPAVKYGNRENITKMKQNHFCFTPSLNVTIDMLCGDSDTSAAIQLINIMEMAGYDVSAPKAEIVAMRKHIANVEYGMKAISDACIRAKNKKVIFRGKKADITIN
complement(533872..534039)         PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; AK38_474; phage(gi418487672)     3.49e-19            MQKAKDMYQRKIRFPEEICLAIQNNGENQSRQFNTEVIYQLRKVYGLIEKRNDEA
534163..534594                     PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; AK38_475; phage(gi418487671)     6.59e-42            MSREDPQLRIRLPVELKEKIEGSAKENNRSMNAEIVQRLDASYLSEFPEDGVLSAKDALQIANNAKESLSNLIFTRTFAEISKKVRIGHKSFCIDLDDLELEVLSDDDFNYVLKRTFSRLTELGYILSEKSLDSGGFMIEIPE
complement(534673..535305)         hypothetical protein; AK38_476                                                       N/A                 MNKYIANEKMPLLIPAAGFDAKLSMTEKNIEHTEAFMASGVKEFSLPGFVTPHGYRLLVSVNGEHYRLVTDAAIPETVYAVKLAFLEHIVPTRKTCTQILVWRTVQPQHDSAVHGLPQEFFRHFLTQYSIVVSDSEQTNEGRRFWERMIAWAIQAEGHYVYVSNGSEEDRPLTFMTNWDDFYGTWADFCWGDDRDCHCHRLFVISTEQLH
complement(535566..536276)         PHAGE_Entero_HK140_NC_019710: minor tail protein K; AK38_477; phage(gi428781957)     5.15e-132           MRDKTLKAILAHAEAEHPKECCGVVAQKSRVEKYFPCENLATNPTEQFHLDPTGYVEAEDWGTITAIVHSHPDATTQPSELDMAQCDNNELPWHIVSWPEGDLRTIQPRGDLPLVGREFVLGHTDCWGLIMSYFRQTHDIELKDYRVDRHWWESGTENFYMDNWYECGFREFSGPAQPGDLIIMQVSAPVANHGGILLEDGMLLHHPYGQLSQRVPYGGYWQERTMKVVRYEISQL
complement(536279..537031)         PHAGE_Entero_mEp235_NC_019708: minor tail protein L; AK38_478; phage(gi428781827)     3.04e-128           MTINTDLQRLEPGNRVRLYEVDGSKFDGPLLRFHADTLPHTPEEIAAANGDESKLPAKSIWWQGEEYSAWPVQVEGIEMSSDGQSAQPKLSVANLDGTITALCLAFDDMVQAKVIVHDTFKHYLDAVNFPEGNSDADPEQEKVQVYYIDSKSTETNEIVEFTLSSPADLQGLLIPTRQIHSLCTWCMRGDYRSGNGCDYAGTLYFDEKGNPTDDPSKDKCSGLLVDCKKRFGADNPLPFGGFPGAALIKR
complement(537152..537610)         PROPHAGE_Salmon_Ty2: transposase; AK38_479; phage(gi29143766)                        9.61e-106           MRDEKSLAHTRWNCKYHIVFAPKYRRQVFYREKRRAIGSILRKLCEWKNVNILEAEYCVDHIHMLLEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTARIQEYIKHQLEEDKMGEQLSIPYPGSPFTGRK
complement(537915..538256)         PHAGE_Cronob_phiES15_NC_018454: putative minor tail protein; AK38_480; phage(gi401817607)     5.97e-39            MAIETFLWRTQGVPEGSFNQRVRTAQFGDGYKQVTGDGINPETQSWPLTFQGLEKEMMPILAFVRRHTTKSCQWTAPYGVVGLWRVSVDSIKAVPVGGNVMSVSFTFEQAFAP
complement(538259..541762)         PHAGE_Entero_c_1_NC_019706: tail length tape measure protein; AK38_481; phage(gi428781748)     7.00e-159           MADIATISLKVNTSEVERGSNELDKFQVAAAGAAKSADGFGDSGKDVSKITAEVAKEVEETHRRVAEYTEALNKNQVNTRAATQATSEQQQQLRTLLTQINPVTAAFEKLDDMEQRLRDFNAKGMIDPESFHAAADAIQRTRDELGRVAEARTEEGAAAASAAAADKKATDAKEAFLTKLRDQSALYKASASDSAAYRAAQLGITTEAAPLIAAIKQQEEATRRDAEQKRLAAISARGLKDAIKQLGAEERAAAQATKAQENADLSAATAKENFIQRLKAQADLQGKTASEIQAYKAAQLGVTEQAAPFIAKLKEQESAWQNGALSAKQYRLALRQLPSQFTNIATSIAGGMPLWMVVTQQGGRITDSFGGLPGIFAAIKKELFGVSESADESSDSLSENANNLAENADNAKKLIGPLGFVKFGIIGVVAALGASSIAYYKAYQEQEKLNKSVIMTGEYSGLTARQLSGMAYEVSKSSGTISQASAVLSQLAGAGLSSAVDFKSATQAIVDFSDASGESIDNLVKQFSQLSDDPAGGSLALTKNMHYLTAAQYENIAALQAQGDKAGAITAATDALSGAMTRRSQEIKESMGTLPKFFDDVADSAKKMWDGIMGLGRETSDAETRAKLVTQIKSAEEYQRRLALQGKVAVMPKNYDEWKKQIAAIDSENIKKVNGAKLDQDAIDAQVGINNLAQKGLTQAEKRVKAEQELNRWIESNKKAAAAGKATLFTAQDIENARSGIDNEYKDRSTPKIKAYQDDIATRELLDSQARVAALKEQSNLIDTMTDQENRLLKFTQKIADLKSKTILTADQKSLLSRSSEIIASIKLEAQLSRENVERKKATEALKKMEEYTASIVAKNKQNQDRFGLTSKQAGRVDQETQLDNTFRKDTKGINDAEQLAKITAEYNKAKAELHAGFEQEDLNEGNWLAGMTQGLEQYGETANNVFSATAQLAQTTMGSMTSMANQMMTTGSANVKQFATNFMSSIVDIINKLLLAQMIQTAMGWIGGAVSGGNDPGAVPMGLYNGGYVPEFAGGGYTGEGGKFEPKGVVHGGEFVFTKEATNRIGIDNLYKMMRGYADGGVVSNAVTATAPMLGMQGGETAISVDLSGMTITTQGNQQQDTGANNGELVSKAARNEVIAIVTQQLDRAMGQSGRITNFVTNRAGR
complement(541763..541930)         PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; AK38_482; phage(gi401817604)     2.64e-11            MSTQWRTGMSGPTGLDYGCLSQVMDWSGVESKATVFEDVRHMESVALSVIHKRSK
complement(542071..542382)         PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; AK38_483; phage(gi401817603)     2.24e-41            MAVKFTLVPSPTFKVDVTIPRAGLDDGILTFTFRHMPVNEVINMEKVEGQSGLDFAEKFIEGWALPEVFSRENLEVLANNYPKAIEAIVGAFYRELLGNREKN
complement(542395..543315)         PHAGE_Cronob_phiES15_NC_018454: putative major tail protein; AK38_484; phage(gi401817602)     4.43e-87            MGFALPNGAGIYLAKTYETEVAVTAVSNAVDAVLTVATGHDIAEGDIVQLTSSWGALNDLAAKVTASTTTSLTLGSIDTSNTDRFAVGGGVGTVKKIASWIEIPQITEVANSGGDQQMIQIQFLSDTRQRNLNTFKAAQSQTLTLAHDYSQPVYPVLRAADESEQTLATYMYVPKAKENRYSTVKVSFNDIPTTAINAIETVAVVFNLQSQAMTFYKAGIAVPVTGVTLNKTTTILAVAATETLTATVAPANATNKSGAWSSSAPTKATVDPVTGVVTGVAAGSVNIIYTTADGAKTATCAVTVTA
complement(543381..543788)         PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; AK38_485; phage(gi401817601)     4.56e-21            MSTQRITALLEKRLGEWAAIKGIPLAAENVSFDDTGTMYLQSHVMPATTDAIDLAQVSRVFRGVYQININVKAGGGKSKSHIIAAELIELFNLNTELTDGVVTCYINSVPSQFPSITNGISYTTPISMSYRADVI
complement(543785..544369)         PHAGE_Entero_EK99P_1_NC_024783: putative tail protein; AK38_486; phage(gi682122969)     9.74e-34            MADNSSFMASINAFIEKGKRNQELVVQKGAIKILNRLVTMSPVGNPDLWAINNTAVSYNDAVFEHNEELKKDSANLTKTGRLKKRARVTDSMDVKAPAGYTGGRFRGNWQVSLDVQQEGETGRKDPNGNITIAVGNYMIEQFKVGTKAIYFTNNVPYAYPLEFGHSSQAPSGMIRITAEDAVKYFTEAANEVNK
complement(544371..544721)         PHAGE_Cronob_phiES15_NC_018454: putative structural protein 2; AK38_487; phage(gi401817599)     1.10e-41            MAINYPRMRATATRLFTENGATYQLTRGGGVEFVGGVEVDIPLESFPVIGVISSYSPGEIDGTLIQNGDVKMSATADVEIRIGDLIMVDGKKHRVIKPNPVKPAALLICYKPQLRA
complement(544723..544977)         PHAGE_Salmon_SSU5_NC_018843: hypothetical protein; AK38_488; phage(gi410491538)      1.28e-26            MTAKLNIIQFAGYDKADHNKANVIRLLKEALEFAENGNPQSIAIIMISNGDVMDCYHHGGAPYVMVGAIESLKTDYIHSQIERR
complement(544974..545456)         PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; AK38_489; phage(gi401817598)     5.88e-28            MLVTDPTSPDFNSYASAENLTAFALARAMHLPTETEPLLIKAMDYLNGLNWYGSRAKLTQPLPWPRSDIIFDGFSYPSTNIPPQLITAQCMLAVEAIDGELLGSNREAAIKSEAVSGAVSITYAVSDTESFTPNYPAVMAILRGFVAGSGFAINAIARRE
complement(545504..546709)         PHAGE_Acinet_Bphi_B1251_NC_019541: major capsid protein; AK38_490; phage(gi423262007)     3.56e-143           MTTTVNSDLIIYNDLAQTSYLERRQDNLDVFNASSNGAIVLDNALIEGDFRKRAFYQLGGSIEHRDVDSTGKVTGKKIGAGESVGVKAPWKYGPYQTTEEAFKRRGRDVSEFSEIVGVDVADASLEGFIKYGIQALSASIGANPDMVVTANIEVDGKKTLTKGMRKYGDRFGRIALFVMHSSTYFDIIDQAIAAKIYEEAGVVVYGGQPGTLGKPVLVTDTAPIDAIFGLLPNAVVITESQAPGFRSYPINDEENLGVGYRAEGTINIDLLGYSWDETNGGKNPSLTEIGATNSWKKHATSNKVTAGVMIKLVAEDVVAAGVILNKSTTSLVVGAEETLVATVAPSDAANKAVTWASSAAAKATVDANGKVTAVAAGSATITAKCVDGNFTATCVVTVTAA
complement(546723..547496)         PHAGE_Xantho_Xp15_NC_007024: putative phage structural protein; AK38_491; phage(gi66392059)     9.52e-19            MLFRNIARKYYAEAGEGGEGGGGAAAAITPEIQALIDARVNESVTGLKTKNSELLGKLKEQGENLKRYDGIDPDAVKTILQRFSDDEEAKLIAAGKIDEVLDKRTERLRADVDKKLKVANERAEKAENFSKKFSDRVLGDAIRSAALKTGALPGAADDIILRAKGVFTLNDEGEAVAVDKDGSALLGKDGKTPLTPHEWAESLKDVAPHLWPQAEGTNAGGHKPNSGALKRSTMTSAQKADFIRANGSQAFLKLPKE
complement(547618..548730)         PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; AK38_492; phage(gi401817594)     8.71e-159           MATINERLRDEVIAHSLFQSRYGAGVARKMVKVLNESDAELSARLIVALDELNPNSVTVKRLESLLASVRQVNKQAVDAMYTSLSDELLDFAKHEVSYQLSLFDSLLPGPVLNHFPLASITKEQVYAAAMAQPFQGRLLRDWAENIEADRMTRIINTVKNGYLAGDTVEQMARKVRGTRARNYQDGAIEAGRKNVTAVVKTAVTHMAAVARDKFADNNSNIIDAKQWLSTLDNKTSHDCIIRDRLKYTLEGKPIGHKIPYLQGPGRIHFCCRSMETLITKSWRELGIDIDEMDEGTRASMDGQVPAGTTYSEWLQRQSYRRQVQVLGETRARLMQDGGMRTDEFFTDKGEWITLQQLRDIDGRAFSDAGL
complement(548731..549372)         PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608: portal protein; AK38_493; phage(gi764162030)     1.09e-40            MALTEINLGHYRNSADYEDSLFFCGQVQPWISGLTEEWRDWLQKAGVALGSRSPILLPKDGASGFNQAQPNMIAKEGMDSKRDYMISLGARLVEQNSAVKTATQATGDQAASTSVLGICCANVSEAYTQALLWCAKYMGDKDAEVAYSISQEFIQRVADSGMLAAIVAAWQSGAIRDADMIRAMQKLDIIDPESNPNDVLDELKNQSPSLTGG
complement(549391..550119)         PHAGE_Rhodob_RcTitan_NC_029097: portal protein; AK38_494; phage(gi985760152)         3.48e-40            MANNDITFIRPEHGAASPLWETVRDVCRGPDVVKRRRHKYLPKLDPTNNSEENNRRNDDYLRRAVFYAITGHTKNGLIGMAFRRDPTVTIVDKMEYLKTNANGAGISIYQQAQSVLESVLEVAREGLYVDYSADMKGAIILNYRAEDIINWRTERINGRDKLVLVVLRECVEEPDGYGFKDRIQYRELAMDGGRFVCRVWRNVGPKKSGVYVVDSEYYPVIQFGGAWDEIPFTFVGAQNNDP
complement(550119..551093)         PHAGE_Cronob_phiES15_NC_018454: terminase large subunit; AK38_495; phage(gi401817592)     9.73e-177           MAVTQNYGQAPEGRAGYFFDYCQDAEKSQLQGKLLSNLDWKFFFFSWWKNPQYAIDPVEALPQRLVDYFSEMEAKHGVQLNERQKAWYYAKEKTLGDDMKREYPTIPAEAFQQSVEGAYYAKQFRWLYTNKRICKLPDNSHLPVHTFWDIGVGDSTAIWFVREVGEEFHIIDYYENSGEGLRHYMKVLKDRGYTYGDHWGPHDIENREFGSDAKSRKELAREGYEIDGQVYSMTFKVVPKTGVDTGIESVREILSKCVFDEEKCAEGITHLEGYRKEWDDKRGCWKDKPLHDHTSHGSDGFRYFAVAKNNKRQEAFSINMRTAY
complement(551098..552306)         PROPHAGE_Escher_CFT073: transposase; AK38_496; phage(gi26246249)                     0.0                 MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNTPKSGSNTRNGYSSKTLLCDDGEIELNTPRDRENTFEPQLIKKNQTRITQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRQLDALYPIVYMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSDHL
complement(552354..552932)         PHAGE_Cronob_phiES15_NC_018454: terminase large subunit; AK38_497; phage(gi401817592)     3.19e-80            MLTDKQKKLLKNRFWRLNHLYKIKDKNGKCVTFKMTPEQLEYFDGMHDRNVILKARQLGFTTEVCIIQLDLAIFHRKECALIAHTRPDAERLFRNKTQFAYQRMTDDIKKANPLVKETTSEYVFKNGGSVTVSTSFRGGTLYSLHVSEFGKICAKYPDKAKEIVTGAFEAVPLGGKITLESTAEGETVNNIV
complement(552942..553391)         PHAGE_Salmon_vB_SosS_Oslo_NC_018279: hypothetical protein; AK38_498; phage(gi399528759)     1.30e-67            MAALKPDVKAFIIQALACFDTLSMVAEAVQKEFGIKVTHQQVESHDPTKVSGKGLAKKWVELFTITRERFQTEIASIPIANKAYRLRALDRMAAATEKQKNFGMTAQLMEQAAKEVGDAYTNRQKVEHSGGVAISSVASVMDEIGDDDL
complement(553422..554036)         PHAGE_Pectob_ZF40_NC_019522: putative transposase; AK38_499; phage(gi422936679)      2.84e-109           MKRPYPPLSFVNEFRPHIELVPATEVLEWVNSQILSDDGELHNPDHGHLIDADIKIMWASSAFEKQGRTVLGQAEQVAMRAGGWQKARMEQQMYEWFGDVPTFIITLAADYCAQCSDLEFCALIEHELYHISHATDEFGAPKFNKEGQPVLKLRGHDIEEFVGVVRRYGASVEVQEMIDAANKPAEVAHLNVARACGTCLLKLA
complement(554514..555227)         PHAGE_Cronob_ENT47670_NC_019927: phage antirepressor protein; AK38_500; phage(gi431810509)     3.49e-63            MKSMIAIEQEASMTSLDFLRNIINPARIEYGEPEVENRHFLSRIEDEIDDLGVAENFYVTTGQGASRAVKGYMLNMEQMTLIGMRESKAVRRSVLAKLKVMHCPVIPQSLPEALRLAADLAEHNAKLKNELAVAAPKADFVDNYVNASGSFGFREACKLLKAKEPEFRAFLIASNVMYVLGGKMTPRAPHIDAGRFTVKTGENLNNGHAFTQAKFTPKGIQWIAGLWASWQLNNQAA
complement(555499..555657)         hypothetical protein; AK38_501                                                       N/A                 MAKILAYKISIKWWVIPYLHTLNIFCFIFATEPNIDAIGDFIVKHGVKTEIV
complement(555773..556231)         PHAGE_Entero_cdtI_NC_009514: lysin; AK38_502; phage(gi148609441)                     2.25e-29            MPGKLTTALIAVIAALLVGVTYYQNEAAKLQRDVVEIASVANQQKKDLQLIEAQRQAVAAIDIKTTKELADVKSENERLRTDIASGTKRLQLNATCSKPAPKTTGPASVPDDASARLTNAAERDYLSLRERIGIATSQISGLQDYITNVCLK
complement(556216..556728)         PHAGE_Cronob_phiES15_NC_018454: putative endolysin; AK38_503; phage(gi401817587)     9.37e-66            MATIKRIASGSACAVAVIIAIVISAGNVRTSERGLELIGNAESCRRDPYACPAGVLTDGIGNTHGVKAGVIKTDTQIAEDWEKNILDAERCVIRYANGNKLPPSAFDAATSISFNAGCSLMQKSTMFKYFRAGNVTAACEQFPRWIYGGGKKLPGLVTRREKEKALCLES
complement(556759..556956)         PHAGE_Salmon_SEN22_NC_028696: class II holin; AK38_504; phage(gi966201365)           4.04e-17            MRMEKYTSGSSYGWGAFTVMLGSLSLNEWAIVVGIACTVGTFTINWHYKRKEFQLREKANESSSS
557202..557477                     hypothetical protein; AK38_506                                                       N/A                 MSDFTIRVELHNADSDDYEALHEKMNAKGYKKEITTDGKTYKLPTAEYVCSKDLSASEIRDDVLRIANSIKPKSDVLVTKSNGRAWSLSKA
complement(557474..557683)         hypothetical protein; AK38_505                                                       N/A                 MKFAELPHEAQIMAAQTLSDRFPAAGSPKSNGFEPAMALARDAKAAFIELYSTDDDEVCGDKLKLGQDY
557846..558022                     hypothetical protein; AK38_507                                                       N/A                 MITDKDVVPALASVGFNRYTTFGWVLPRPDLGGWQDSGSFSTHANVETKKPRDIRGLF
complement(558107..558670)         PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; AK38_508; phage(gi423262398)     1.15e-36            MNTQLSFRNTQFDIANHSGQIWLRGTEIAKALGMEKSDAVSQIYNRNSDEFTEAMTLTLKLSVKGFGNGKSAKDVRVFSLRGAHLIAMFARTEIAKEFRKWVLDILDKEVGNTPPVITPVTKVPAELKSRYRVRVIIYDEMFGNCLELIGKADTFRTIASGIATDLGFKPTGFVAVQMDSSKFKRIY
complement(558941..559330)         PHAGE_Entero_BP_4795_NC_004813: putative antitermination protein Q; AK38_509; phage(gi157166023)     1.61e-56            MRDIQLVLERWGAWVADNREDVYWPPIAAGFSGLIPSKVKSRTQCCDEDGLIISGIMAGLNSKHPVVHSLLFDYYVFGKTFMQLSKEHHCSDTHIGKKLQNAEGVIDGYLMALEVKLEMDKQVRRELAA
complement(559331..559936)         PHAGE_Edward_GF_2_NC_026611: putative recombination endonuclease; AK38_510; phage(gi764162320)     4.90e-71            MNKLPKNRNCKVCKTRFKPETVYQWWCDEEHKEEYIKQLALKARQNRIQKTEQRRREETQAERRSLKIRKLAVKPLSYFAKQAQQAFNEYIRTRDAGDACVSCGRFHEGQYHAGHYLTVGANPELRFNEDNCHRQCAPCNNHLSGNIEKYTPNLIAKIGQVRFDILMGPHEMTNYRRDDYIRIRDEYRAKTKALKKLREAA
complement(560010..560456)         PHAGE_Cronob_ENT47670_NC_019927: putative ninB protein; AK38_511; phage(gi431810524)     3.42e-60            MDKKVFVLCGDQYKRNAIQFISQLPVNPDKPLLITIQERTRTLDQNARLWATLGDIAKQVVWHGQKLSSEDWKHIFTASLKGQRSAPGLEGGFVVLGQSTSRMTVGELRDLIELINAFGATHGVKFSDESRLAIEWANRFGDKGKVAA
560483..561181                     PHAGE_Pseudo_F116_NC_006552: DNA adenine methyltransferase; AK38_512; phage(gi56692911)     1.35e-66            MLRKERSYAEIYNDLDGDVVNLFFVLRDMTLRECLIEALILTPYSRDEFTDAYGEAETMVERARKLVIRATMGFGSAGATKGTTGFRLDTKRGSATAQHLWARMPENLAAVGQRFEGVLVENRDAVQCMLDHDTVSTLHFVDPPYVHDTRVISSRYYRHEMDNDAHLTLLDTVNNLEGMVVLSGYNTDMYNDILTGWQKQEKQSSAAGRKGSVKRLECLWLSPNVLSGSKAA
561481..561741                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; AK38_513; phage(gi169257269)     2.32e-24            MDNVIQMNPSKWVSEDLLMSLNGMTKHMIQHARRKSWMEGREYIHVAPDLNPKENSPIMYNRQEIDNWVERQRPAIRRRIGERISA
complement(561909..562094)         PROPHAGE_Escher_CFT073: transposase/IS protein; AK38_514; phage(gi26248359)          1.84e-38            MILTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGESYRLRQKRKAGVIAEANPE
complement(562169..562495)         PROPHAGE_Escher_CFT073: transposase/IS protein; AK38_515; phage(gi26248359)          3.42e-67            MAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIERNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMAPACSSLMK
complement(562474..562686)         PROPHAGE_Escher_CFT073: transposase/IS protein; AK38_516; phage(gi26248359)          3.04e-27            MMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEENWHVINVNRRCIPEWQPSRR
complement(562686..562814)         PROPHAGE_Escher_CFT073: transposase; AK38_517; phage(gi26248360)                     6.94e-23            MLALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVA
563572..563583                     attR                                                                                 N/A                 TTGGCGGCTCAG
563777..565015                     PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage integrase; AK38_520; phage(gi169257156)     1.05e-159           MHRSLHQGQRVRENLGVPDTAKNRRMAGELRESVRYTIKIGNFNYAAQFPNSKQLHKFGVAQLNVTVSQLAEKWLALKVMEITKNGISRYRSYIKICAGIIGEERLVSSITNEMVLSLRKELLTGFQIAGVHQKTRQLKKGRSVRTVNVYLSCFAAMMEFAVANGYIERSPFVGISPLKKSKSEPDPLTRDEYARLMEVAPSLQVKNIWKLAVSTGMRHGEICALAWEDIDLKEWTITISRNMAVVHHFTPPKTESGNRTIKLTNSAIEALKEQMALTKMGKKIKVDVHLREFGKIRKDDCTFVFSPRLSARNGKGGDWYSPGVFSGTWNFALKKAGIRHRKAYETRHTFACWALSAGANPNFVANQMGHTSSQMVYSVYGKWMSENNSNQMDILNARFTGDAPYMPRAISQ

#### region 2 ####
692579..692590                     attL                                                                                 N/A                 GATAAAAAATGA
complement(699452..699556)         PROPHAGE_Salmon_LT2: transposase; AK38_651; phage(gi16766077)                        1.17e-09            MRKIRFNEHEIIAVLKFVEAGRTVKYVCRQSAIF
700234..700668                     hypothetical protein; AK38_652                                                       N/A                 MSTKSFYFSRRADMRAEGVGAVHASFSLSINVTEDNVKEGKRMYLSASLVCNAAKAYGSGKIVPWCKIKNNIDNKKYVLESNGESFILRHDEVLIGSSSFLIPCKKNILPVLDIEAGYFLHTGYTRIIRPFPGSLTRQITLNKF
700680..701249                     putative exported protein; AK38_653                                                  N/A                 MKKSVKLSVAIFYLFLCIPVFSLPIFNESLPADNPTQEAALLVQKLITSEDSEKSEIFKQFKNLLDENPENINVRKMYINSLLADRYYAEGLQELEILNKKHFTRTDLLTECMVKERLGKRDDECYRQVIHLSEQQQSIDSDYLTALFFANDKRFEPLKNRLIKEGVFKESDLLIFTLSKETMLREFYP
701437..701610                     putative membrane protein; AK38_654                                                  N/A                 MKGILYNVLFSTIPFIVIALFSMCYLEFFPNHFGKLTLVTIVIVFFVSCKMMPNKYI
complement(701667..702005)         PROPHAGE_Escher_CFT073: transposase; AK38_655; phage(gi26246249)                     2.13e-69            MALDKFAEAWDDKYPKISKIWRTHWENLNTFFGYPPDIRKAIYTTNAIESLNSVIRQAIKKRKVFPTDDSVRKVIYLAIRDVSKKWSMPIQNWRLAMSCFIIEFGDRLSDHL
complement(702005..702865)         PROPHAGE_Escher_CFT073: transposase; AK38_656; phage(gi26246249)                     0.0                 MDEKKLKALAAELAKGLKTEADLNVFSRMLTKLTVETALNAELTEHLGHEKNTPKTGSNTRNGYSSKTLLCDDGEIELSTPRDSENTFEPKLIKKNQTRITQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVTEWQNRPLDALYPIVYLDCIVVKVRHNGSVINKAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTR
complement(702913..703989)         TIR domain protein; AK38_657                                                         N/A                 MASCIPPKVPGYLQRIREQYKESEPVIYKVLSHAKVFVREDYHTDHNYDAVGHDICLFLPMEILIDIHISKQEAYTNLIKNDLNILTRSVHDEWIGEVALELNSEIDPEYQQAISINEIVNEVLNPDELSIWKPNLIRVFISHRDKYKREAQELANSLEEYGFSCFVAHETIEPLKEWRNEIVNGLKTMEVMLVLLTDDFNDSIWTCQEVGYALGANKPVVTLKVGKVDPAGFISHLQAVKGSLDNPTHNAELLNMLLAESIGKASRIQQALISTFIASQSFDEAKHRFNRMNKSIKKLTEENLNTVMDGFRRNNQLNQCMYLNNNYNRLKTFIERTTGKSAITSGKEIFIETVNKIV
complement(704055..704345)         PHAGE_Burkho_phiE202_NC_009234: gp7, pANL12; AK38_658; phage(gi134288781)            2.00e-08            MNKRISKVTMTDNPEWGEAEFARARPATEVFTELFGKEGAEKVIKTRGRPKLANPKEPVKLRIDHDVVDAYRAQGDGWQTKMNEALRDYAKTHGML
complement(704326..704598)         PHAGE_Burkho_phiE202_NC_009234: gp6, pANL56; AK38_659; phage(gi134288760)            2.56e-15            MDISYDPIKNEKNIAERKLSFEMARDFEVATALIVEDLRKEYPERRFQALGYIEERLHMLVFTPRNGKVHVISLRKANSREVKRYEQKNQ
704734..704988                     PHAGE_Salmon_SP_004_NC_021774: phage baseplate assembly protein; AK38_660; phage(gi526003627)     6.07e-22            MNILIAGLKRLLANIIRIGIVSDVDLANGLCRVKMGNLKTDWLNWLTLRAGRVRFWSAPSLGEQVMVISIGGVQRGGDWTEGVK
704985..705284                     PROPHAGE_Salmon_Ty2: phage baseplate assembly protein; AK38_661; phage(gi29143751)     3.03e-34            MTSDKYSGMNRNSGLNIDDIDHIRQSISDILATPQGTRVMRRDYGSLLSTLIDQPQNPALRIKMMAAVYGAVMRWEPRVTLAVEISPGRCRGWKFLGIY
706023..706238                     hypothetical protein; AK38_662                                                       N/A                 MALQGKFVVNNAHYSPLSIFGVGTFMAFSGNKAYRNRGGCTMVPDNGHYPRGATGLLSALKAGLKPALIPQ
706235..706540                     hypothetical protein; AK38_663                                                       N/A                 MKDFPTKFTHAPTDHNEWFGLYRDDGKIDDYTWINNVERGNFRLHPIGPMRVSMGCITLQHAADFQVLRKALLHTQTIAVNGTKLMAYGCIEVVTNGNTCP
706521..706799                     hypothetical protein; AK38_664                                                       N/A                 MATLVRRLLKVLFFIGLFILAVKYIHSYPYPMPESQLQYWFSISEFLGFSNPEDIYFPAMLVLDIIVASLAYVLIIKGFHKFRTRKKTSHAG
706964..707104                     PHAGE_Salmon_SP_004_NC_021774: major tail sheath protein; AK38_665; phage(gi526003633)     2.21e-16            MSDYHHGARVIEINDGTRVISTVSTAIIGMVCTSDDADPTLPSVSA
707215..707634                     transposase family protein; AK38_666                                                 N/A                 MTVTAVAQMEGISEATLYNWRNQAKSEGEPVPGAEKNSEQWPAEARLAVIVETATLSETEIAEYCRKKGLYPAQIAQWKQAFLQVPSGDDKVALKQSQKENKQLKKELLRKEKALAETAAILVLRKKLRDYYGETDEDD
707706..708665                     PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; AK38_667; phage(gi48697274)     4.36e-17            MACREVELSVRTWQRWQTSPEDQRTTAIRPEPTNRLRVEEEQQIRAVCHQPEYANLPPSQIVPRLADKGVYLASESTFYRVLRRHGEVHHRGRCLKPGRVKPPTTFTASGPCQVWTWDITWLPSWVRGRWYYLYLVEDVFSRKITGEEVHETESGELAAALMQRTVLRERCYRQPLVLHADNGAAMKSQTLQVKLAELNISPSHSRPRVSNDNAYVESLFRTLKYVPQWPSSGFNHLEEARVWVDKFTRWYNEEHRHSGIGYVTPLQRHTGEDKALLAQRDKVYQAARAANPKRWSRQTRNWEWQESVTLNPERGKQAA
708772..708785                     attL                                                                                 N/A                 ATTAAAAAAATAAA
708885..709229                     type VI secretion system effector, Hcp1 family protein; AK38_668                     N/A                 MSFNTYLKLTGSEQGLISAGCSSFDSIGNRHQNDHDDEIQILSLNHAITREQHCTHHPVEFIKPIDKLSPLMAIAISNNEILTPSFSIYRLNQFGALEIFYEIKLTKATIIDIS
complement(709446..709628)         putative membrane protein; AK38_669                                                  N/A                 MKLLHRVFIDLLFVALAMLFFALFIYMSGKVPEFFMMYVFYGGFCLSFYFSYRLRKIFMT
complement(709820..709993)         hypothetical protein; AK38_670                                                       N/A                 MIYSKQSADAVLEKYFDAFIKNASTVIFDTVENLDLGAGRAFMTVSPEIIPELTMYP
complement(710238..710360)         hypothetical protein; AK38_671                                                       N/A                 MKIESGQAIAGYSIQDVGALIRFGFSYEHHQSLPSQMSNK
complement(710753..710980)         PHAGE_Salmon_118970_sal4_NC_030919: hypothetical protein; AK38_672; phage(gi100025)     9.23e-19            MLYREAIYNPDSPAARFAEAIVTKNRFGEYGTVYQEFQNGHFLAVDQLVAREASRMSKEAMKLPVREKRYSTANF
711091..711606                     PHAGE_Pectob_ZF40_NC_019522: putative integrase; AK38_673; phage(gi422936642)        4.67e-79            MDKRGITSRTQANREKTFLSRVYRWGYERGIVKGNPCRGAKQFTEKARDRYITDEEYDAVYQVAPDVVRVAMEIAYLCLARQADVLALRRDQLREPGIYIKQGKTAARQIKAWSERLRDAITLAESLPLKSGISSVYIIHQRTGLRYTRDGFNSKWHKAREVAKNISKVRF
718191..718204                     attR                                                                                 N/A                 ATTAAAAAAATAAA
718610..718621                     attR                                                                                 N/A                 GATAAAAAATGA

#### region 3 ####
4502885..4502897                   attL                                                                                 N/A                 TTATCTGATTTTC
4514660..4514872                   PROPHAGE_Escher_CFT073: transposase/IS protein; AK38_4104; phage(gi26248359)         3.04e-27            MMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEENWHVINVNRRCIPEWQPSRR
4514851..4515171                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; AK38_4105; phage(gi557307613)     1.68e-23            MAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIERNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMAPRLAHH
4515254..4515439                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; AK38_4106; phage(gi557307613)     9.38e-16            MILTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGESYRLRQKRKAGVIAEANPE
4515575..4515937                   PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; AK38_4107; phage(gi16130540)     7.89e-31            MVSLGAYPALSLADAREVRAEKLAMLVRGVDPQARADEEAEKLQIAEESIFVNVARKWFELKESHVSAAHAKDIWRSIEKDILPSIESVPIQELKARTLIQVLEPIKARGALETDLLPIE
4515986..4516249                   PROPHAGE_Salmon_LT2: transposase; AK38_4108; phage(gi16766077)                       2.11e-39            MKKRFSDEQIINILREAEAGVSARELCRKHAISEASYYNWKAKYGGMEASDIKKIKDLEDENRRLKQMFANLSLECRALKDVIEKKL
complement(4516680..4516931)       PHAGE_Clostr_phiMMP03_NC_028959: hypothetical protein; AK38_4109; phage(gi971820267)     1.03e-05            MSKNTKQTSGKVASIAAKTLNDPNSSAIQRSLAGSALSQRGTPNQTSGEMEHKASAALDNPRSSALTKQLAASVLAQANKDRK
4517642..4518409                   PHAGE_Mycoba_Bactobuster_NC_031279: prohead core protein protease; AK38_4110; phage(gi100061)     3.45e-06            MKLNFRLQNAPSPTSALPIILIHGLFGNLDNLGVLARDLQQHHNVIQVDLRNHGLSPRAPQMDYPVIAQDVLALMDELAITQAIIIGHSMGGKVAMAMTALAPNRVEKLVAIDIAPVNYQVRRHDTIFAALNAVSAAGVTQRNEAAQLMRTLIKEEGVIQFLLKSFQGGEWRFNVPALWDQYENIIGWQPIPPWPHPILFIRGELSPYIQDSYRDDIARQFPQARAHVVAGTGHWVHAEKPDSVLRAIHRFLDAA
4524146..4524158                   attR                                                                                 N/A                 TTATCTGATTTTC
