gi|00000000|ref|CP010015.1|  Bacillus sp. YP1 plasmid pBUYP1, complete sequence. 83186, gc%: 35.09%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
26540..26553                       attL                                                                                 N/A                 AATTTTCTCAACAA
34909..35208                       PHAGE_Staphy_6ec_NC_024355: hypothetical protein; QF06_20410; phage(gi658310327)     6.47e-16            MFEDFIITNHVIQRYEQRVGECRKNIESRIKRDVRNLNIKQIVNNGNVRHIFTRNSKEFIFVKERNHWILTTVIKRSRNNNHEAIEKRKRMAKRMAACV
35338..36618                       PHAGE_Brevib_Sundance_NC_028749: putative ATP-dependent DNA ligase; QF06_20415; phage(gi971482659)     2.23e-86            MMKKYVEIFKEIKNESSRKGKEELLRKYENVEGLKEIFKFVYDPLVKTGLAKKKIEKEVCLPTYTQLETIFDAMAYVILYNTGSDQIIQSIQIFLKQLKTEEERELAKSILTKDLPIGISSTTLNKVYGKGFISKHKVMKGQKYNPEKHLTKGEEFIVSLKVDGFRSTTKNLEEGSEFITTTGAKYEGLIELEELMKKLPTGFVYEGELVNVNRDNLSSSDLFRATQSRLKKHGIKKDVRFLLFDMIPIDDYEKGVFDVPYKTRRSFLEETIKKSLPADSLISVVPKFYVGNDKDVIDDLFLEAIGRGEEGLMIHLSDGIFELKKSPSILKVKPEEEADLRCLDVVEDIRGGKCGSIIVDYKGHRVAVAGLKEKWKVDFWKDPSLVVGKIVEIKYFQESKNEHGGLSLRQPSLNRIRDDKDEVSYS
complement(37612..37950)           hypothetical protein; QF06_20425                                                     N/A                 MEIKRITRKEFESFPKFKNVEEAIKFFKEKYEDHFMEQGLGPFEEFELGKYYHHLLILDKEGFKRMGEWMIKNNRATFPSESYSETKGMNESVQPIFIFENGRIQVSSLAED
complement(37988..38560)           PHAGE_Bacill_phBC6A52_NC_004821: DNA integration/recombination/invertion protein; QF06_20430; phage(gi31415840)     1.14e-45            MIILNMVSPIRDKKQLELLKMYLREKSKRDYLMFMVGISSALRISDILKLKVGDIWDGRKPKEFIYLHEEKTGKYKRFPITENLQKAIREYMKEYQLDQESYLFFSRKGNKPISRQQAAHILSSAADYIGIKEPVSTHSMRKTWGYWAYKKGYSLALIMEALNHSSIAITKKYLGITQEDLDDVYMSMNL
38819..39853                       PHAGE_Staphy_6ec_NC_024355: hypothetical protein; QF06_20435; phage(gi658310441)     1.07e-64            MSFTSQRNFKGRLDGTTVHEINKKIDFEKTTLEERKKVVEEILNETNFYSEYFDGYFKTGITTKDFLSHQNNVCKSLDRMATYLLTSDEIKKEEEQEKTEYIFYSDERYFQKKVEKEQSIESLTNSDSNDFSENVIHFLKKEERNKILLRPQSITASDLERDDWLGEILRSYKPFYDFVTQKLKNKEGNRFILSRIKGQLQHDMIYSKDTLLGVFGYNLKYFSQSTEYDIDVFDFTNPLHLKGDVVETESGKTISAKGLLFLKPDFDPNDDFSFILLDLKSTIEKAKLTDFEKEVLRQTQNGLTQEEIAANFNTYQMKISRTIDRIVKKVAAVGDKYDSEETEV
39910..40608                       hypothetical protein; QF06_20440                                                     N/A                 MFKYGLEAECHNAVIKGKDGKGHIDFYLAKYVTFKLIERDPFIKPIEILNFIWKHYYPGEITRFLNNATKHYGDRGEVERNYIKYFFQRIGRPIFQEIVVRNLVNSCLMFWFEIPSSKEDRNSKIDGTVLHLKDSNISIPLQIKNHRHMDSKDQKEKQEQIKCYGRPAEYLEVHFFNDDMVNGELYWIEGDLKVLFTNRGLDKTSVQSFETKILKEMAKKAENQFTFSKAQI
40638..40868                       hypothetical protein; QF06_20445                                                     N/A                 MSTPGYEALTRKVKSFRENLSTRTKNDKTWLLYESVNELSEEDLKDLGLTIVDLAEIVSNEIDQNPFTLKKEHLVH
40880..41404                       PHAGE_Geobac_E3_NC_029073: hypothetical protein; QF06_20450; phage(gi985758416)      1.91e-59            MKEEKGLDYAKSQVEEFHRAFHHPISEKPTSIPEDVALARTIWTAEELVEFLYATAGGNKTKFYGLVTELIRGITAAESKVIKKGPVEDILVDQMDALTDVNYFVQGSFVVAGVKPQPLFDIVQDANMAKLFPDGKPRYDLGNSGKILKPEGWQQPEPKIKAEIENQIKKSEEH
41409..41987                       PHAGE_Paenib_Tripp_NC_028930: hypothetical protein; QF06_20455; phage(gi971757037)     1.92e-21            MQKVNFKNLTTTELNEFISKAAEELTKRANKSPRVITARKKVIEDAKSDLENLKDSTMCDGYEVGSYATVPEYHINRKKRVVTVLLKGYRSGRIYAKGIAKCDPRDTFNEHIGKAIALYRALSKKVPTKYLTVENPVEPEIGDIILTSYPEFENERIRVVKSMSEAMADDAAMLRSPVVKNFTFIVDDSKSA
45430..45443                       attR                                                                                 N/A                 AATTTTCTCAACAA

#### region 2 ####
45688..46050                       PHAGE_Clostr_phi8074_B1_NC_019924: hypothetical protein; QF06_20490; phage(gi431810419)     1.73e-06            MINFLLNWLPVLGTVFLTICYLPQIRKTYVIKDVNGMSVLFWLSLNVALIFMLVNAIMIFIKFGTWGTMITEALNEALALIMLIMVLKYRKNSSYVVPQALITAEWLKQKFNEENDKRQG
46139..46375                       hypothetical protein; QF06_20495                                                     N/A                 MKNSYKVGDKAIIIRQFCGHEFEIGEIVTILHDAGHSDFFQASDGKNTWYVSINELYPYELIKKKYRKNKKTPAKFIN
46444..47478                       PHAGE_Staphy_vB_SepS_SEP9_NC_023582: ATP/GTP binding protein; QF06_20500; phage(gi589891521)     1.67e-82            MAINLLNLEPIKASTDLASYTSFIYGVPKIGKTSFVHKLYGDRVLFIATEKRHKVLVGANVQYVSNWIEYLQVLAQLQNKKIKERYDVVCIDTVENLYAMLETYILSKYDKTEFGQVEWGKDWVDLKNDWKKNLQQIERLGYTPVFIAHATQVTTKIPVSGVLQEQVNDTMTLVTDKKTKEQYYQFEKYVPDLKDKVMAPINKMVDNILFMTVTTDEHMNEHRVIHLRETLQWQAGSTFEGIAPVIPLDAEAYKKAVTDAINLIDPSQLKEEKESVGLQEEQLDYDALMQEARELGVQFHKANRMDEVNRIVDEVFGAGNKLTDASKEQVQPLFVAIQKMKEIL
47550..49919                       PHAGE_Staphy_vB_SepS_SEP9_NC_023582: ribonucleotide reductase alpha subunit; QF06_20505; phage(gi589891510)     0.0                 MTVVIKDKNKKRERRMEFDRERLISFIKRGFENIEVNPTTKESYISKVVRTIERREEIESKDITKILIQNALVLTNDIKNDSGYVSPDYLVNTNWNRFARYVKLQELYKRASKNRSYDSKEKYGDFYGLIVTLTEKGLYTPDILANYTREELVKAGNSIVPERDELFDFAGLHSLSGRYCVKDFDKSVYELPQERFMIAALHLMMPEEKDRVEKAIELYWALSNLYLTLATPTLMNAGRVTGGLSSCFVLTTEDSLRGIFDDNTDVSTFSKNGAGIGIYFGKLRATGSDIRGHKGAASGILGWIKQLDNTAVSVDQLGQRPGAVAVYLDIWHKDIEDFIDLRLNTGDKSKRAYNVFTGLCIPDEFMRQVEKRGDFYLFDPHEIKQKMGFSLEDFYDKKKLGEKETPNPIDHAWTYHYYLCVDNNNLDKRRVPAIELKKRYMKAQLETGIPYMFYRDTVNRNNPNSHSGMIYSSNLCSEIAQNMSPSFVTQETINWETGEVIIHKQIGDLVTCNLSSLVVNRTEKDGVTERVIKIQMRALDNVISLLKVPVPQAQYTNMKYRAVGAGEQGIAALLAQEGIMWDSEQAIEYISKLEEKIMLNCIKASALLGKEKGSYPVFEGSKWQTGEWFEERDLNSPEWLEVKELASKYMRNGYLRAIAPTGGTSVIAGSTPGIDPIFDVIYFERKKDFHLPILVPELNQKTWFFYKPTMKMEYENEKQLAHLWAIKHNAARQKFVDQAISHNFYIPQDIKAKNFYKLHMENWKAGVKTSYYTRSWDQKHESSCLACSA
50023..51066                       PHAGE_Staphy_vB_SepS_SEP9_NC_023582: ribonucleotide reductase beta subunit; QF06_20510; phage(gi589891509)     2.67e-132           MEQLTKQVRVFNENLPNKGERMFDDVSGILFWDDIINQVYYELIKEMREVFWIPDEVSMSKDKVQWATEMNEMEQELFLNAIGILAVLDSIATYFDNVAAYYIRDSAIKALMAFVAAMETIHNESYTYILSSVSSKAVSLDVFERPKKNEFMIRRNKLMMDLFDEFIQNPTPETFAKGLVAMSGLEGLCFVNGFTPFYHFNRNGKMFGTGTVIQYIQRDEMKHSYFQTILVRDILTQYPELNTEEFSEFVYDFFTKLVQLEREFCEDLYKNTPDIDIVEVKEYIGYRANLILDNLGLDQIFAAKKNPMPWITAFDPDNLNNTKRDFFEDKEVNYGKANEQKNDWDDL
51068..51493                       PHAGE_Staphy_vB_SepS_SEP9_NC_023582: hypothetical protein; QF06_20515; phage(gi589891508)     3.77e-20            MGYLPIILASNTGNTRTFISFIQEHTKRDLQVIEDFNNPFPNNNRLAIGSYTWGNGKIPKRLKEYLIENHLQLYGKEIFIFGSGNSVYPKFCGAVEGIKKICLDCGADVIAAFKFEQRFNQQKLTEQELYNLIGSIKYWSR
51745..52251                       PHAGE_Geobac_E3_NC_029073: hypothetical protein; QF06_20520; phage(gi985758386)      2.63e-25            MTRGNIIFVRRKGILSKLIRLFDHRGKFSHVAITVSDTEILEADINIVSRVKKFNSKEYSYYEILDLGLSSEQQEKVVEISKAYIGKKYDYAQIFGYIIKNLFHLKGKNLFNNPNNLICSELVFNVLDHLGITNDLGITGEVRGIDLTPNELYDLLKYLSKSIETSQT
52350..52736                       hypothetical protein; QF06_20525                                                     N/A                 MLNYATLKPGELINFKEGEGSTYDLLKKEIQGTLALTSIEELDVWYDDGFLLKEEPSMPSLIIKNTPNPSITDWDVVICGNIMFASSNEDGDTISLTEEATKILSKFKLALLGTNPVWVYHNYEVKQS
52982..54034                       hypothetical protein; QF06_20530                                                     N/A                 MESPKKWFVFKYEHIDYLDNIELLEPDSNKALLDELKQLFKKEGWEGDGEIGQIWLPPFVLHKANSYGHWVYHVKQQNNGTSFLASRLFLPFGELLKQNASKQNLSIPDDEKEPVNNEGRNIIQHEVDSFKKDLFSYKDNIEKELKAIDEISNQKIKEEIEEKILGYNQCMLIQLLNDFMDNCYLQLLIEVLENGNISKLKLSKKNVKLDLNKMDGDDWLTIANIISDVYDDYRRTGFTDKLSRLTKPLDYEMSKQDKELRHEIIKHVIIRNCIQHHNWNLDRDSLNYSLPNADSIEVMSDENSTIEINKYKRIKLSKTELYEIIDKLNSFAETLSSRVGEKIKTRYKQI
54126..54614                       PHAGE_Staphy_vB_SepS_SEP9_NC_023582: hypothetical protein; QF06_20535; phage(gi589891502)     1.70e-21            MSSRLVKCYGTCEQKHPQSIMQKFKSKNYCPACYKKKVKEVEDRENLYNKCKEVFGISFPTGLMLRQIKQFKEERGYTYKNIGFALDYIVRIKKIQLELKYGLALIPHYYDEMIDYYKDLKRRRENMVVKKIETQKVQIKPPSLSQNRYRDKKLINMEDLLK
54611..56203                       PHAGE_Staphy_vB_SepS_SEP9_NC_023582: DNA heicase; QF06_20540; phage(gi589891500)     5.22e-130           MTEVNSATTDNVMKALNPTRAVYSVIGSLCKNPHLLRDSEIIITEKDFAHEFHQIVFSSIYNIAYSNYEVTKIDEIDLDNYLASFPQHYKIWEKNDGLSYIRKSIAHANENTFKSSYDRLKKISLLRHYVLNGIDVSDLYDWKSTDLKVRNDGMKKIDSMTVNEIIDHYTIKLTKIKDEFNIGQETKSFMAGDDLDTLLDELDEDPEYGNPFTNKFYNTIFRGKRKTKLMLRSAGTGTGKTRQALADMCNASCDEIFDIDQNKYVSNGPSIPTLFISTELVKREVQTIMLAFISGVDEDVIKDGKYSEVVLRRLKKAIEILKRAPIFCEYVNDFSISDIETIIERHIIENNIQECAFDYIQMTPKLSRTMASAFGNHLREDQILHQFSSSLKILAEKYDIFIASSTQLNRGSKDIENRDPSALRGGQATADKVDFGILTFRAGASDHHNLKHILQTGFTNKKPNYSHWVYKNRGGKYSNVIIWTYMNLGTMREEPLFVTDYDFNLLDVHPMDIEYAIEATEDSAEEVPVF
56283..57323                       PHAGE_Staphy_vB_SepS_SEP9_NC_023582: DNA primase; QF06_20545; phage(gi589891499)     9.26e-113           MDANEVKQSLSENDIFTLLQELGAQPKLKGSNIICKTICHNGHSHKLTYYSNSHSFYCFTECGHMDLYGLIGKIKGLTFFESFKFVCQRFGLSYGNSKYGSDKVDISFFEKFEPKDMAAEIKLLDKKILDSYYDYYHKSWIEDNISPKTMKKFNIKYSVLDNQIIIPHYDLKGNLVGVRARNLNQELVNSGKKYMPVFYKNRFLKHPTGACLYGLNFNLEQITDYGAIILCESEKSVMQIDTMFPDMSIAVALSGSTLTDTQLEIINDLGIERVIIALDKEFTEVGSIEEKYYIEKINSVFINKLGSRFETSVMWDVEGLLDLKDSPSDKGPETFMKLFHNRILVA
57384..57587                       hypothetical protein; QF06_20550                                                     N/A                 MRSVIKIEIDRPLNSEEIKYVNKLSAEEKEEQIKRMNYAIKDMLELEGIHPQFLRITNKIVGESNED
57577..59331                       PHAGE_Staphy_vB_SepS_SEP9_NC_023582: repair exonuclease; QF06_20555; phage(gi589891497)     1.15e-100           MKIKQISSYNGDIIDTILKNRNIKDIDTFLNPNSSEDLNPFDLHNIELGANVLLAHLLINDHIGILVDADADGFSSASIIYQYIKKIEPDSHVSYFLHDRKAHGLTDEISQKIADSSIDLIIIPDAASNDVDELQRLYYMGIDIIVLDHHEVDKMPTHGILINNQLDENKSTNKNLVGAGMAYKFCQALDRILDTHYADDLLDLVAIGQIGDTSDISENEVRNLVFRGLETINNPLVKVAVMDVFGSLEGIAPKDLSFSIIPMINAVVRVGTEDEKDLLFRALNKIGDGRVWNVEKRKKNKKTGKFDKILVEQDLYEYAFDMMKKVKGRQNSMIKKSLEKLRSSTYNEGGISIALLDSSDEAAITGLVANKVAKKYQKPALVLYYKDKKYIGSGRGNEKVLSSLKDWCNETGLVEFAQGHANAFGISIPEDNFEEFKKRTHEVEQNEFVYEVDLIVKENVDRSLIEDVTDNKHLFGGKVQEPLLAFVGIKINKNFIRQKGSMLTFYENGVEFVMYGAPEGLYESLKNNFDRQITMDFVGTPSVNVYGNKRTLQLVLVDCERNESGQYDFIIEVPDEITAETIIF
