gi|00000000|ref|CP010131.1|  Escherichia coli strain C9 plasmid B, complete genome. 56460, gc%: 48.34%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(785..1822)              phage repressor protein; RG31_23090                                                  N/A                 MSKRTIEREYKKFLSLAECWKDLVVSNSVFHDTSYNGEDFRHVALTHDPDVLKEAEKCLVAWKAFVDVCRNAGGKKLNIVETAYLPIPFIIEDTNQSTHIVVSTASTTRTFTRESLLKKYDNVIKKSKKSPIFSQVVDALEKERHFFAMEPEGELYRARKDDYTDVVLTSALTSDNTLSRLRVGAHGALVFSRNKELKIPVVNNVDERRSITVYSGVKPIPCGPLGGFSLYRVNDITRNQPSYVAKAYILRSIESRNLSFNNKSQALLNSTPPEIRQVIERKVNAAREALIRLKKMDMELIDVMMASGDDLTGIRLTDARKKYGKEIEERYGYTFNQTLSATKLR
1984..1995                         attL                                                                                 N/A                 TTTCTTTTTTGA
2220..3248                         PHAGE_Entero_P1_NC_005856: Cre; RG31_23095; phage(gi46401628)                        1.37e-74            MSKLIISGNSGMFLRDIGAEYQEAAKNFMQFLNDQGAYSPNTLRDLRLVFHSWARWCHARGLAWFPISPEAAREYLLQLHDADLASTTIEKHYAMLNMLLSQCGLPQLSDDKSVSLAMRRIRREAATEKGERTGQAVPLRWDDLKLLDVLLSRSDRLVDLRNRAFLFLAYNTLLRMAEMSRVRVRDLEQTGDTVTLHVSHTKTITTAAGLDKVLSRRTTAVLNDWLDASGLREHPDAILFPPVHRSNKARITTTPLTAPAMEKIFSDAWALLGKSDATPNKGRYRTWTGHSARVGAAIDMAEKQVSLVEIMQEGTWKKPETLMRYLRRGGVTAGANSRLMDS
3321..3665                         hypothetical protein; RG31_23100                                                     N/A                 MQSRITESRRFTVDGYTVTFAAGVKRGEAVVVFGIMTGLETVPVLTLEKKWSNLGEAESYVRRVTVIAAEKLLAHYQENYRAMTEKIDLVFSRPTTGFIAPVDARSHYPVRGRK
3662..4153                         hypothetical protein; RG31_23105                                                     N/A                 MKHYYPSLNCYPSSSPELSGKLLALLTESPEAWLKPADLNLQIQEYGYETTRRELKHLVSFGFLRAHKGKGYQLAITPEEARQLFAYRETQTQSRVVAEIIRNGSIYARKFWLSGGGDASQFLRAVRALEEQGIIESTNVSVPTAPHIKRRIYTFTKRAKKHD
4146..4640                         PHAGE_Pseudo_NP1_NC_031058: hypothetical protein; RG31_23110; phage(gi100055)        4.09e-37            MINVKVKRLHPGAKLPFYATAGSAAMDFEAVEITPCVDSNGAISSSWWVYTGLAMEIPPGWCLKLYPRSGLGCKKHTRLANCVGIIDSDYRGEIMAKLITDPGGEGVCLKPGMAVMQGIFERVEQVSLVEVDELDETERGAGGFGSTSEGRFEIKRSQLKYEKL
4654..5454                         PHAGE_Entero_P1_NC_005856: IsaA; RG31_23115; phage(gi46401641)                       2.08e-75            MSTENAKRILYRLRNGLVVEIEPDMSLPLVTIERTVMAYFGFDEELLLEEGIAIWRNGETGKRMFFTVRDKEYSQDELIKLAQTYHCPPIGLFDNYSFAQRLIGELQLAVTPVIFRNGSLLGIWRVERISNYKPFDRAINGIITGVNQPVSCENENLLLAVYATACRVIGLAKQAFIHFPNGAEGSAEIIACDFEFTWMLREYLDQTVFRAEELDMYITSTIPDDVRAEAIATARAKCRAAIAEQAKEEPSDEAVADVEADADADA
complement(5538..5918)             PHAGE_Entero_P1_NC_005856: Doc; RG31_23120; phage(gi46401725)                        3.43e-77            MRHISPEELIALHDANISRYGGLPGMSDPGRAEAIIGRVQARVVYEEITDLFEVSATYLVATARGHIFNDANKRTALNSALLFLRRNGIQVYDSPVLVELAVGAATGEIPVSSVAEKLRELFGSNI
complement(5918..6139)             PHAGE_Entero_P1_NC_005856: Phd; RG31_23125; phage(gi46401724)                        3.62e-46            MQSINFRTARGNLSEVLNNVEAGEEVEITRRGREPAVIVSKATFEAYKKAALDAEFASLFDTLDSTNKELVNR
complement(6212..6604)             PHAGE_Entero_P1_NC_005856: HumD; RG31_23130; phage(gi46401723)                       8.32e-69            MGFPSPAADFAESRISLDAQFIKRPTATYFMRAACSHLREGILQGAMLVVDSSLPPLDGSLLICAVEGEFRVKRYRKHPRPHLEDLESGRRESLPDDDDSSYSGSQAIFGVITYIINDARSGEFDDCPVI
complement(6716..6964)             PHAGE_Entero_P1_NC_005856: Hot; RG31_23135; phage(gi46401721)                        8.55e-45            MSDWNIAAKSQEERDKVNVDLAASGVAYKERLNIPVIAEQVAREQPEHLRAYFMERLRYYREQSVKLPKGSDPVYQKADPQK
complement(6967..7182)             hypothetical protein; RG31_23140                                                     N/A                 MSGCAMVQYNDGEKVSIQSDGWYGLDSLQKTADKACQQYGKSKAVYQHSANANPHLAPGSGVQNTIWKCEP
complement(7303..7593)             PHAGE_Entero_P1_NC_005856: PmgU; RG31_23145; phage(gi46401716)                       1.70e-42            MNKASPVELRVSIEMAHNRLHDTAIKCAGTQQLRERISRVLGEVITPDRHKQAEKSGLERSHLEAALNIKPGHTLGVIDAMLVHEMAKALLPLEAD
8519..8707                         transposase; RG31_23160                                                              N/A                 MLTRKSIDTVLLSVGAEKLSQREWDWMKMLKPMDPPPAMVTTSILKRRGDTAALTLLQDTGV
8717..9916                         transposase; RG31_23165                                                              N/A                 MLSGFTPRPLKRLFTANQCWTSFLDAGGLRDIEVEAVTKMLACGTRILGVKEFGCDNPDCQHVKYLTNSCGSRACPSCGKKATDLWTATQLNRLPDCDWVHLVFTLPDTLWPVFESNRWLLNDVCRLAVENLLYAARKRGLEPGIFCAIHTYGRRLNWHPHVHVSVTCGGLNKHGQWKKLSFLKDAMRSRWMWNMRQLLLKAWSEGMAMPESLSHITTESQWRSLVLKSGGKYWHVYMSKKTAGGRNTARYLGRYLKKPPIAASRLAHYNGGASLSFRYLDHKTGETATETLTQRELVARLKQHIPEKFFKMVRYFGFLANRVCGEKLPQVYRALGMDKPEPVAKVCYAQMVKQFLSRDPFECVLCGCRMVYRRAIAGLNVSGLKKNARDISLLRYMPA
10047..10262                       PHAGE_Salmon_SSU5_NC_018843: putative helicase; RG31_23170; phage(gi410491534)       6.85e-35            MDNGIDWFFNFLYVKKNQANVCFITDFIDVSNKYLMSHSYERKHIIDTTPGFAEGVLPVGSTFDFTVLDRE
10265..10543                       PHAGE_Salmon_SSU5_NC_018843: hypothetical protein; RG31_23175; phage(gi410491533)     1.96e-55            MSEKRAINCQVKLTEKANDKLETFQNRLRERSIKLSKADIINLVLSNMTMGDFDKIATSLETTAKAREKVMKIYENSGMTKEDLADILKRLD
10603..11025                       PHAGE_Salmon_SSU5_NC_018843: putative lipoprotein; RG31_23180; phage(gi410491532)     6.11e-93            MKHVLLPLVAASALLITACQSRPIPVSEAKPAPQTRIFKYQSPAASTLVVMRDKSMVGAGCDASIFINGETVAKLETGEKVTFHLDAGEWIVGASLEDAGLCALNPARQERETITKAGETKVFRVFTSNAGDIDILPTTL
complement(11201..11878)           PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; RG31_23190; phage(gi41057343)     1.80e-97            MLTQNGVPMSRYRAGRLMKYLNLSSCQPGKHQYKNARQEHTSLPNLLERQFAVPEPDRVWCGDITYLWAGNRWCYLAVVMDLFARRVIGWSLSAHADTALISSALRMAYETRGQPRDVVFHSDQGSQYTGLKYQQLLWRCRINQSVSRRGNCWDNSPMERFFRSLKTEWVPTNGYAGKDEARQQINDYILNYYNSVRPHHYNGGLTPEESENRYHFYCKTVANIT
complement(11872..12054)           hypothetical protein; RG31_23195                                                     N/A                 MTATRLSACVLLWKYTAAVTGTGENDAIRLIRHESGCAAKYAGRGTKVGALRARALWLKC
12127..13107                       PHAGE_Bacill_BMBtpLA_NC_028748: IS5 transposase and trans-activator; RG31_23200; phage(gi971482498)     0.0                 MSHQLTFADSEFSTKRRQTRKEIFLSRMEHILPWQNMTAVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVKTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRVDQMIRQWERSQ
13388..13780                       PHAGE_Entero_P1_NC_005856: UpfA; RG31_23205; phage(gi46401684)                       1.43e-86            MSDKVTVKQTINKATSIYKIEHITVGKPGSEQYRHAFELADQLGLKHPDCIEHVFPTYADEQCTHVLTEEDFFSTEEREGVDRCIGVICSSVSYELFPNVHENGGIGYQFLYEGDELKCYEHGLLIESVE
14098..14958                       PHAGE_Entero_P1_NC_005856: RepA; RG31_23210; phage(gi46401683)                       0.0                 MNQSFISDILYADIESKAKELTVNSNNTVQPVALMRLGVFVPKPSKSKGESKEIDATKAFSQLEIAKAEGYDDIKITGPRLDMDTDFKTWIGVIYAFSKYGLSSNTIQLSFQEFAKACGFPSKRLDAKLRLTIHESLGRLRNKGIAFKRGKDAKGGYQTGLLKVGRFDADLDLIELEADSKLWELFQLDYRVLLQHHALRALPKKEVAQAIYTFIESLPQNPLPLSFARIRERLALQSAVGEQNRIIKKAIEQLKTIGYLDCSIEKKGRESFVIVHSRNPKLKLPE
15358..16563                       PHAGE_Entero_P1_NC_005856: ParA; RG31_23215; phage(gi46401682)                       1.24e-176           MKRDYGGVGTIALRASALLKAMSQDIEDQRKEFNQTEYYQTFTRNAVAKLPKLSRRIVEQAIKEMEDDGYQFNKKQVGNVEQYALTIQNVIDIYAHRKIPKYRDIHKSPYVIFVVNLKGGVSKTVSTVTLAHALRVHQDLLRHDLRILVIDLDPQASSTMFLDHTHSIGSILETAAQAMLNDLDAETLRKEVIRPTIVPGVDVIPASIDDGFVASQWKELVEEHLPGQNQYEILRRNIIDRVADDYDFIFIDTGPHLDPFLLNGLAASDLLLTPTPPAQVDFHSTLKYLTRLPEMLEQLEEEGVEPRLSASIGFMSKMTGKRDHETSHSLAREVYASNILDSSLPRLDGFERCGESFDTVISANPQSYPGSAEALKKARTEAERFTKAVFDRIEFVRGEAA
16560..17525                       PHAGE_Entero_P1_NC_005856: ParB; RG31_23220; phage(gi46401681)                       2.06e-68            MKKIVSRGRVLGKNSSEFARMLEGSEGTKTFTLKSGRQAKFLLTVVLSGEIESRTFVDPAVNGRDQSLLTPESVSDISRTIKLQQFFPAIGRMVGERIEVLDGSRRRAACIFNETKFEILVTKDEISLADARQLAIDIQTAREHTLRELGKRFEVMYGKSMTKEEIARAENISKAKVTRAFQAAAVPDEMIAVFPVASDLALPDYQLLLQISEDANAKSVPIEELVDTVRERIAETEGAKEDKAKILAIFKAESKSLKPAPVKSVVVEKLRDFSDRRQYARKKSDPKKRVVAYEFSRLPSEVQTEIDEAIKKIIGKMSAGE
26013..26024                       attR                                                                                 N/A                 TTTCTTTTTTGA
