gi|00000000|ref|CP010246.1|  Yersinia pestis Pestoides G plasmid pCD, complete sequence. 71525, gc%: 44.89%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(46636..46830)           PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; CH43_4297; phage(gi41057343)     7.66e-15            MQSMSRRGNCLDNSPMERVFRNLKSEWLPVGGYMDVHHAVRDIGEWIQSYYNTPPSAQWWITAL
46851..46911                       attL                                                                                 N/A                 ACTGCCTGGATTTCTTACTCCTGTACTGCCCTCCCTGATCCGAATGAAACAGCAGCCTCTT
complement(46865..47092)           hypothetical protein; CH43_4298                                                      N/A                 MLTPQHIWLAREPVDMRRGIAIHYRPSASALARRSRLCLLQQRRVRVSKFCVGTNTGSGCEEAAVSFGSGRAVQE
complement(47366..47515)           hypothetical protein; CH43_4299                                                      N/A                 MQLSDYIDSVYGTAVSERRSHIVNSLPLSHSGLSQYNEPEVKYDDTVFS
complement(48498..49364)           incFII family plasmid replication initiator RepA; CH43_4300                          N/A                 MTNHQALFTHHYRQVKNPNPEFTPREGKKTLPFCRKLMAKAEGFTSRFDFSMHVAFARSLSLRHRMPPLLRRRAIDALLQGMCFHYDPLANRIQRSITNLAIECGLATESKSGNLSITRATRALRFLSELGLITYQTEYDPQIGCNIPTDITFTPALFSALDVSDVAVAAARRSRVEWENQQREKQRLPRLEMDELIAKAWRFVRERFRSYQTERKAHGLKRARARRDVDRTRRDIEAIVNRQLTREIAEGRFVGNLDAVRREKARRVKERMLMSRNNNYTRLATGAT
complement(49673..49927)           replication regulatory RepB family protein; CH43_4301                                N/A                 MSQIENAVTSSSKRAYRKGNPLTGAEKQRMSVSRKKETHKAINVFIQNDLKNELLQLCEDSGLTQTEMIERWIQREKAARTNAA
50457..50858                       PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; CH43_4303; phage(gi41057343)     7.25e-23            MDIHIAPYRQPFTFQASVYSRRIVGSAISSSPDAELVCRAWRNALETRPREKRLLFHSDQGGQYRSKKYRQLLWRNGVMQSMSRRGNCLDNSPMERVKVNHQCQVAPATIDFDIADISTPHTIGLRRLKLPFQ
complement(50730..51137)           PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; CH43_4302; phage(gi41057343)     4.14e-25            MVELCRLLKITRSVYSASLNFRVDVKRLQLRELHQQSRGAAGSRTLSLLMRQSGYNVVRWLARRLMRECGLASRQPGKPRYRGEREVSLASPDLLKRQFKPSEPNRVWSGYISYIKVNGGWCYLALVIDLYSFHW
complement(51161..51478)           PHAGE_Bacter_Diva_NC_028788: transposase; CH43_4304; phage(gi971743573)              2.88e-09            MTQPKQTKRRFSPEFKLEAIEQVVKYQRSTIEVARALELDPSQLRKWIRQYKEEVSGMTPDNPALTPEQREIQSLRAQIKRLEMEKEILKQAAVLMSEFPIKSLR
complement(51650..51886)           hypothetical protein; CH43_4305                                                      N/A                 MANSLWEVAGFTEDGAVRFRQGDQEKIVDPQKATEDRHIDLAYTLTAYGVQGASERFVIALFGAEGGRKRMATLHLFT
52300..52446                       PHAGE_Shigel_Sf6_NC_005344: gene 56 protein; CH43_4306; phage(gi41057344)            3.12e-06            MTPDNPALTPEQREIQSLRAQIKRLEMEKEILKQAAVLMSEFPIKSLR
complement(52772..53707)           PHAGE_Salmon_SP_076_NC_021782: agglutinating adhesin; CH43_4307; phage(gi525972748)     4.76e-08            MGSGSMATGVDSVAIGPLSKALGDSAVTYGVSSTAQKDGVAIGAKASASDTGVAVGFNSKVDAQNSVAIGHSSHVAADHGYSIAIGDHSKTDRENSVSIGHESLNRQLTHLAAGTEDTDAVNVAQLKKEMAETLENARKETLAQSNDVLDAAKKHSNSVARTTLETAEEHANKKSAETLVSAKVYADSNSSQTLKTANSYTDVTVSNSTKKATRESNQYTDHKFSQLDNRLDKLDKRVDKGLASSAALNSLFQPYGVGKVNFTAGVGGYRSSQALAIGSGYRVNESVAFKAGVAYAGSSNVMYNASFNIEW
complement(53653..53781)           hypothetical protein; CH43_4308                                                      N/A                 MLALRIPIALRLVLLLKQQNQQQLLWALVQWQQALILLQLVL
complement(53824..54075)           adhesin yadA; CH43_4309                                                              N/A                 MTKDFKISVSAALISALFSSPYAFAEEPEDGSDGIPRLSAVQISPNVDPKLGVGLYPAKPILRQENPKLPPRGPQGPEKKELD
54491..54503                       attL                                                                                 N/A                 AATTTTTTTATTT
54681..55061                       PROPHAGE_Xantho_33913: ISxcC1 transposase; CH43_4311; phage(gi21231060)              1.81e-38            MVERYPRDGFFKVFQILRRWGYVWNHKRVHRIYCLLKLNIRRKGKQRLPARTPSPLAVPERLNLSGAVDFMHDALICVDDYNREKLAIEIDLNLPTQHVIRVLDRIVVNRGYPVMGFEVQWDENVR
complement(55058..57373)           PROPHAGE_Xantho_33913: Tn5041 transposase; CH43_4310; phage(gi21231545)              1.28e-33            MPVDFLTTEQEQNYGCYVAEPNDVQLVRYFHLDERDLAFIYQRRGKHNRLGIALQLTTARFLGTFITDLTQVLPGVQHFVAVQLNIRRPEVLSRYAERDTTRREHTAQIKEYYGYHEFGDFPWSFRLKRLLYTRAWLSNERPGLMFDFATAWLLQNKILLPGATTLVRLVSEIRERANQRLWKKLAAIHYLTELNGTKKRLLDDAPEHIITGPWKRLVYDAEGRIQRAGYSLCLLERLQDALRRRDIWLKNSDRWGDLREKLLQGEEWQAQRVLVCRALGHPTDGHKGVQQLAVQLDETWRAVASRFEGNTEVHICNDGKYPSLTISSLEKLEEPLSLLRLNNRVRQLLPPVDLTELLLEIDARTGFTREFTHVSESGARAQDLHISLCAVLMAEACNIGLEPLIKHNIPALTRHRLSWMKQNYLQAETLVSANARLVDFQSTLELARRWGGGEVASVDGMRFVTPVKTVNSGPNRKYFGSGRGITWYNFVSDQYSGFHGIVVPGTLRDSIFVLEGLLEQQTGLNPVEIMTDTGGTSDIIFGLFWLLGYQFSPRLADAGEAVFWRVDKSANYGALDELARGCADLSKAENQWDEMMRTAGSLKLGTIHASELIRSLLKSSRPSGLAQAIMAVGRVNKTLYLLNYIDDEDYRRRILTQLNRGESRHAVARAICYGQRGEIRKRYREGQEDQLGALGLVTNAVVLWNTLYMQEALSWMRSNGEETRDEDIARLSPLMHGHINMLGHYTFTLSDDILNGELRALNFNLNNELSP
57537..58088                       PHAGE_Salisa_1_NC_017983: hypothetical protein; CH43_4312; phage(gi388570712)        1.10e-31            MRLFGYARVSTSQQSLDIQIKTLKDAGVKANRIFTDKASGSSADREGLDLLRMKVEEGDVILVKKLDRLGRDTVDMIQLIKEFDAQGVSIQFIDDGISTDGEMGKMVVTILSAVAQAERQRILERTNEGREEAKLKGVKFGRKRRINRKELLELHEQGMGATEIAKKMNIARSTIYKVINESQ
58107..58571                       hypothetical protein; CH43_4313                                                      N/A                 MNLQNNLYSILEKVESLKNIKMLDKNNGEFTYIEGDYYFSDLTTDSLNIYEIKYLFTFENFDFFSNGKPNEVSVYKATNSFNSVCLGIKASLNSLDVERKELTVQFTYSMVFDASKGIPNFSNELETSMGLLRIAPKKLSNSFKDKGIEHNYVN
58710..59039                       hypothetical protein; CH43_4314                                                      N/A                 MLTFFAKYYFDLFFNKEKNRKEKEITTRLEKRISKLEKENISLRDDLIKCKLEHIDEVMRIERSLNTQLKTNYKNNNNENLWAGIDDIIKTIECVSIESKIGGVKTNLK
59139..59405                       PROPHAGE_Ralsto_GMI1000: isrso12-transposase orfa protein; CH43_4315; phage(gi17546157)     4.67e-46            MKKTRYTEEQIAFALKQAETGTRVEEVCRKMGISEATFYNWKKKFGGMGVTELRRLRQLEDENQRLKRLVADLSLDKEMLQDVIRKKF
59486..60238                       PROPHAGE_Ralsto_GMI1000: ISRSO12-transposase ORFB protein; CH43_4316; phage(gi17546158)     8.90e-103           MQSRTVYNYRSHRDDRAITQRIREIAETRIRYGCPRIHILLRREGWLVNHKKTHRIYCLEGLNLRSKRPRRHVTAKHRHARPEVTALEQCWSMDFVADNLFNGRRVRALTIVDNFSRECLAIEVGQGLRGDDVVAVMDRLKHSLGRIPQRLQTDNGSEFISKSMDRWAYENRVTMDCSRPGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQEYNHFHPHSSLNNLTPAEFARSHQKGPDL
complement(60386..60811)           tir chaperone family protein; CH43_4317                                              N/A                 MRTYSSLLEEFATELGLEEIETNELGHGAVTIDKIWVVHLAPINEKELVAFMRAGILTGQSQLYDILRKNLFSPLSGVIRCALDKDDHWLLWSQLNINDTSGTQLASVLTSLVDKAVTLSCEPTMKKEEDDHRPSSSHLLV
60844..60856                       attR                                                                                 N/A                 AATTTTTTTATTT
61031..61042                       attL                                                                                 N/A                 AAAAAAAAACAG
complement(61155..61586)           PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; CH43_4318; phage(gi557307613)     5.63e-91            MHELEALLSRLKMEHLSYHVESLLEQAAKKELNYREFLCMALQQEWNGRHQRGMESRLKQARLPWVKTLEQFDFTFQPGIDRKVVRELAGLAFVERCENVILLGPPGVGKTHLAVALGVKAADAGHRVLFMPLYEDITNIGVY
complement(61586..62734)           PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; CH43_4319; phage(gi557307612)     0.0                 MIKQMRQQGAYIIDIATQVGCSERTVRRYLKYPEPPARKTRHKMVKLKPFMDYIDMRLAENVWNSEVILAEIKAMGYTGGRSMLRYYIQPKRKMRPSKRTVRVETQPGYQLQHDWGEVELEVAGQRCKVNFAVNTLGFSRRFHVFAAPKQDAEHTYESLVRAFRYFGGSVKTVLVDNQKAAVLKNNNGKVVFNSGFLLLAEHYDFLPRACRPRRARTKGKVERMVKYLKDNVFVRYRRFDSFTHVNQQLEQWMADVADKRELRQFRQTPEQRFALEQEHLQPLPDTDFDTSYFDIRHVSWDSYIEVGGNRYSVPEALCGQPVSIRISLDDELRSYSNEQQVASHRLCSASSGWQTVPEHHAPLWQQVSMVEHRPLSAYEELL
62891..63505                       PROPHAGE_Xantho_33913: IS1477 transposase; CH43_4320; phage(gi77747809)              2.26e-74            MYRLYHLSGLGVKRRRRRKGLATERLPLLRPAAPNLTWSMDFVMDALATGRRIKCLTCVDDYTKECLTVTVAFGISGVQVTRILDSIALFRGYPATIRTDQGPEFTCRALDQWAFEHGVELRLIQPGKPTQNGFIESFNGRFRDECLNEHWFSDVSHARKTISEWRQDYNECRPHSTLNYQTPSEFAAAWRKGNSDSEGSDITK
complement(63568..63960)           yopE regulator; CH43_4321                                                            N/A                 MYSFEQAITQLFQQLSLSIPDTIEPVIGVKVGEFACHITEHPVGQILMFTLPSLDNNDEKETLLSHNIFSQDILKPILSWDEVGGHPVLWNRQPLNSLDNNSLYTQLEMLVQGAERLQTSSLISPPRSFS
64349..64813                       outer membrane virulence protein yopE; CH43_4322                                     N/A                 MAHSVIGFIQRMFSEGSHKPVVTPAPTPAQMPSPTSFSDSIKQLAAETLPKYMQQLNSLDAEMLQKNHDQFATGSGPLRGSITQCQGLMQFCGGELQAEASAILNTPVCGIPFSQWGTIGGAASAYVASGVDLTQAANEIKGLAQQMQKLLSLM
complement(64953..65252)           plasmid stabilization system family protein; CH43_4323                               N/A                 MYKLSELADEDIYNIASYTIRHFGVTQAKLYHENLAKVFELLAKNPELGAECNWICSDIRRFQYKKHGIYYITLSNDILISRVLHQSIDIDVQDFPEHE
complement(65245..65487)           hypothetical protein; CH43_4324                                                      N/A                 MAHVTSVTLGEHLTGFVGEMIQSGRYGNISEVLRDALRLMEAREQRVQHVRDMVLAGTNVPVSHRLMDEIFSAAVKDTSV
65963..65974                       attR                                                                                 N/A                 AAAAAAAAACAG
complement(66335..66493)           hypothetical protein; CH43_4325                                                      N/A                 MVPITNVGIGYPGGTVVPITNVGIGYPSGTVVPITNTGIEHPSGNVIRIESD
complement(66661..67626)           PHAGE_Yersin_PY54_NC_005069: partitioning protein SpyB; CH43_4326; phage(gi33770536)     8.25e-120           MMKRSPVLRNAPSINFDDAKPAISNAEPSVSAPAVSQLASRVSGMKGNTIVLPVCGRNVAFTLKVIAAPDVESKTIVFSGNERNQALLSETSLDDLIPSFLTSGQQIPAFAREHNGNIEVADGSRRRKAAILTGSDYKVLVGNLNDEQMLWLSQIANEYRPTSAYERGLRYAQRLISEFEGNISKLAEAEHLSRKIIQRCIKTAGLPLKTIQLFANPNELSARSGEALSKAYENNVDTLKRVTHKIMKQKQEGRQFTTEELIVLLMPERKQPENIHKKSFGKNIEAKYSKDNVSFYLKSVPESLVKQIEELLNTYAKEHSL
complement(67623..68789)           PHAGE_Yersin_PY54_NC_005069: plasmid partition protein SopA; CH43_4327; phage(gi33770537)     0.0                 MDLKSTLDRCIERGQFMTQEIAKSQFGNDSPAARTITRRWRITEAAELVGVTPQTIRNYEDSGKLPPPDTAMIGRVEQRTGYSIQQINDMRDVFKTRLSKPKGENPVVLAIAAHKGGAYKTSTSVHIAQWMALQGLRVLLIDATDPQATASLYHGYVPDLHIHEEDTLLPYYLGQRDDAAYAIKPTCWPNLEVIPSCLAVHRIESEIYGLHDQGKLPVAPHLLLRAAIESVWDSYDVVVLDSAPNLGIGTINVVCAADVIVVPTPAELYDYVSTLQFFTMLRDLMSNIDLNGFEPDVRVLITKFSNAIGSQSQWMDDQIRNAWGGMVLKEVVRVTDEVGKGQVRMRTVFEQAANQRSTPAAWRNAVSIWEPVCAEIFNRLVKPRWENA
complement(69589..69783)           PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; CH43_4328; phage(gi41057343)     6.21e-14            MQSMSRRGNCLDNSPMERVFRSLKSEWLLVGGYMDVHHAVRDIGEWIQSYYNTPPSAQWWITAL
69804..69864                       attR                                                                                 N/A                 ACTGCCTGGATTTCTTACTCCTGTACTGCCCTCCCTGATCCGAATGAAACAGCAGCCTCTT
complement(69895..70353)           PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; CH43_4329; phage(gi41057343)     6.60e-32            MVELCRLLKITRSVYSASLNFRVDVKRLQLRELHQQSRGAAGSRTLSLLMRQSGYNVVRWLARRLMRECGLASRQPGKPRYRGEREVSLASPDLLKRQFKPSEPNRVWSGYISYIKVNGGWCYLALVIDLYSRRIVGSAISSSPDAELVCRA
complement(70377..70694)           PHAGE_Bacter_Diva_NC_028788: transposase; CH43_4330; phage(gi971743573)              2.88e-09            MTQPKQTKRRFSPEFKLEAIEQVVKYQRSTIEVARALELDPSQLRKWIRQYKEEVSGMTPDNPALTPEQREIQSLRAQIKRLEMEKEILKQAAVLMSEFPIKSLR
