gi|00000000|ref|CP010306.1|  Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome. 1742047, gc%: 30.37%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(182279..182998)         PHAGE_Bacill_CP_51_NC_025423: putative resistance protein; PJ17_00935; phage(gi725949539)     1.19e-13            MFEWIFSIDAWITLATLSALEIVLGIDNIIFLAILVSKLPPEHRDKGRILGLAFAMITRILLLLSLFWVMKLVTPLFSVLGNEISGRDLVLLLGGLFLIVKSIKEIKEQISHQEESQSHFKASNKLWIVVAEIAVIDIVFSLDSVITAVGIAQDVTIMIIAVIIAVAVMLFASKPIADFVEKYPSIKILALAFLVLIGVVLVAESFDIHIDKAYIYTAMAFALVVQILNILDQRKEKNG
complement(183070..183636)         PHAGE_Prochl_P_SSM7_NC_015290: PRGA-formyltransferase; PJ17_00940; phage(gi326784531)     4.09e-35            MLVKLAVLFSGNGSNLENILEKLHKKTIGENTYEVVLCICNKKDAFGVQRAKKFGLDTVIVDHKAYNTREEFDTILVQKIKESGANLTVLAGFMRILSPVFTKNIKAINLHPSLLPLFKGAHAIKESYESDMKVAGVSVHWVSEELDGGMIIAQKAFEKRNLSFEEFEEKIHSLEHEILPLSVIEIFS
complement(183627..184997)         kinase; PJ17_00945                                                                   N/A                 MKAIIDNIKILEQNAINKGLDELILMENAGLNLAKLIKKEAKKIRIQRKIRKVKILFLLGGGNNASDGLVALRNLKHAKAYKIGFKENTLFKKQEQILQNYAFKFCKKEPNFKKFHIIIDCILGTGSNRCLDEKTSLIIQKVNQSKALKIACDIPTNLGFYPCFKADITLCMGALKEILLEDFAKEFVGRIKIANLGIRSKKFYPNSQAFLLEKKDLKTIDRKINANKGNFGHIYIVANASAGTLAGLGALNFGAGLVSLVAQKSFSPLLMLKEKIENNASAIALGMGLENLDFLKDEILQNTPLILDANCFLSEALLWYLNRKDVVITPHPKEFIKLYKMCFDEDLDIETLQKNRFFYARKFSQNYDCVLVLKGANPIIVQKEKLFVVNLGNQALAKGGSGDVLSGMIAAHLGFGFSALEAAKNATLAHGLVAKKYKFNKNSFDALKLIKGLKCL
complement(184981..185679)         hypothetical protein; PJ17_00950                                                     N/A                 MENKSIAIFIDAENIPAKYAKSIFDIASDYGEVIIKRIYGDWTQKNIQGWREQIAEYSLIAMQQFNFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSDSDYTSLIQKLRENKKQVIGMGLEKSIKSYVNAFSEFFYLDKDESKKEDILSKDYLRALINITEQLIDEKGRAEYAQIRTNMNRKYSDFHPQNYGFKNFRALIQKFLPKMKKFEEEREKNIYFLVKKDYESYY
complement(185681..187186)         PROPHAGE_Escher_Sakai: putative ATP-dependent protease; PJ17_00955; phage(gi15833954)     1.92e-87            MKKLKCISFHEGLDIIEVESTFTRGLPNLSIVGLASTAIKESVERIKATLLSCDFAFPAKKITINLSPSGIPKKGSHFDLAIALLILLQNEELDDFFVVGELGLDGSIKSTNELFSLLLFLSAKIKKAKIVVPKSIAQKASMIPNLEVYGLENLNEAIEFFKEKNYENFRFSHNHPLFANPLQIENEIFLQNMDFKLDFKDIKGQEKAKRACMIAALGMHNILFEGSPGSGKSMCAKRLVYIMPPQSLNEILMQNAYMSLDSKDCEFTKIRAFRHPHHTSTRASIFGGGTKNARIGEVALANGGVLFFDEFPHFNKQIIESLREPLEDHKIHISRVNSKITYETKFSFIAAQNPCPCGNLFSKNLSCVCSENEIKKYKNHISAPIMDRIDLYVAMDEISKDDKTSISSKEMSEKILQAFIFSKKRGQKEFNGKLKDEDLSRFCVLEKDAKDTLDLAISRYNLSLRSLNKILKVSRSIADLEQSLNISKTHILEALSFRARN
complement(187183..187710)         PHAGE_Synech_ACG_2014f_NC_026927: baseplate tail tube initiator; PJ17_00960; phage(gi100217)     5.48e-15            MVRKIITYPNPRLFLNSEIVNKFDTELHTLLDDMYETMIASNGVGLAAIQVDIPLRVLLVNIFDENDEQKKEDLLEIINPEIIPLDEEMITCTEGCLSVPDFFEEVKRYNHILLKYQDRFGEFKELEAKGFLAVAIQHENDHLNGHLFIEKISFAKRQKFDKEFKKKKKNHKKEK
complement(187746..188330)         PHAGE_Bacill_G_NC_023719: gp257; PJ17_00965; phage(gi593777713)                      3.30e-58            MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQKVAKIAKDTERDFFMSAQEAKEYGLIDKVLEKSFK
complement(188330..189664)         trigger factor; PJ17_00970                                                           N/A                 MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGFRLGKVPVSAVLKRYERELTQDAEQNLFKSAVNSALQELKKENKELVGEPYFEKFDRKDGEIIAELILSFKPEIKLEGYEKLIPEYQTPKVSKKEIDEKKDELLKRFATPEAIKTKRALKEGDFAKFDFEGFVDDKAFEGGKAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIKVTFPKEYGAAHLAGKDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKLKEQIKNEKLFKLVNDELKGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEIEELKASKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRYGMNPKEHLENYKKQGALPAVKMALIEEKLFNDIFIPKTEKSEKVSKKEKEDK
189807..190379                     PHAGE_Strept_Dp_1_NC_015274: FolE; PJ17_00975; phage(gi327198319)                    3.72e-50            MQKKFEDCVKTILEIIGENPNREGLIKTPNRVFKAYEFLTSGYTQNVKDILNDALFESSNNEMVLVRDIEFYSLCEHHLLPFFGRAHVAYIPNKKVVGLSKIPRLVEVFARRLQIQEQLTEQIAQALMENVDAKGVGVVIEARHMCVEMRGIQKANSTTTTSALRGIFLKNEKTREEFFSLINSAKQVRF

#### region 2 ####
complement(1459370..1460266)       PHAGE_Prochl_P_SSM2_NC_006883: nucleotide sugar epimerase; PJ17_07500; phage(gi61806141)     1.31e-11            MTILLTGATGFVGTNFILQLHKKYNIIALVRKTSDIEKIKNYCKIYYYDDTIDSINNVFKSEKIDGVVHLAALYKPTYNLNDFKNMFSVNIYLGSEILECIKIYPIKFFINTATFSQFANCNSYNPRTLYDAMKHSFLDLMKFYYRECSNTVFTSLLLFNPYGLHETTLKIFSLWAQSIKTNEVFKMGEGKQKIDVTYIADIIDAYHILIDLCIKRQVKNGMIYSTENKRYSIRELACLFEQINSVKLPIRWGAINDDFIILEPISYKTSKMLLKLPKWKPKISLEEGMRQIFQYIMK
complement(1461275..1462234)       PHAGE_Entero_phi92_NC_023693: Phi92_gp067; PJ17_07510; phage(gi726647000)            1.04e-08            MKKVIISGATGFIGSRLVRLLLKSNIEVLALGKRDRKDINPLRFPEDPRLTYLKLDMAEISNLPEYLKAIGWDPTDSVFYHFAWGGKNGLSDLVVEDQYQNVIWSINAFITADQMKCSKFIHVGTMEEAFVKPYLDLDYHKEKHYNRHVVYALAKKAARDYLKSISNQFNIDLIIVTKSHVIGPNDSRDSFLLVVVQKIINGEKIEMTSGEQRFDAISVTDCVKAFKVIGEMGSKNSEYWIGSGNPRTLREYIEIIANLYPPKYAIEFGKIAYSDVKLDKKVFSPKLLNNELNFRCNQTFESAIGELYRWLKFREIYEE
complement(1462231..1463136)       hypothetical protein; PJ17_07515                                                     N/A                 MKNAIVFGATGYIGRALVEKLLLEDVKVLAIGRKKECCVKHDNFKYVAIDNDLEIFFEQLLKLKYDYENAVFYNAAWSGLDRLTNGEIQDQLNNVIMSSKAIKFAAKFNCSKFINIGSQEESIFNYFVNTDDWKTISYTSSPIYYAGAKFANMEMLKLLAYLEKIDFINTRFSIVIDISLSGVSFVAKSLKEILNGGEPQNIKNTQPCEIILLDELVESYYQIGKFGTNKADYYLGTGKPDILANYLSSFYHYKTNTKKYTQMKLKFDKKLLDTFDPSSLYEDTNFCFRKDFSQVMQEILE
complement(1463139..1463696)       PHAGE_Entero_phi92_NC_023693: Phi92_gp065; PJ17_07520; phage(gi726646998)            2.33e-30            MSRFIFTPTIISGVYVIEPKPIKDNRGYYERYFCIEDFKEIGLKKPIVQINHSKTSIKGCIRGFHYQNYPFAEVKIIRCIKGAIYDVAVDLRKNSPTFLKYIGIELNESNGKYLYIPEGCGHAFQTLSEESELLYPVTEFYHPESEGSLNPLDKTVGVSWPLDPVGLSDKDLNAPYIDCFKGLEA
complement(1463716..1464978)       PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; PJ17_07525; phage(gi100146)      2.10e-60            MKSLKIAVFGLGFVGLTTAVGFAKKGFEVIGYEIDKNKASLLNNGEIPFYEEGLSEALNSVLEKQLKITNNVQEALKEARIIFYCIGTPMGEDGSADLSFLLGALKTTAENLTLCQKEPILVIKSTVPPSSCQDIFIPHLESLGVVAGKECHIVNNPEFLREGFAYSDFMDPDRVVIGTQNGQIFKELEDLYKPFNAPVFFTSLNTGEFIKYLSNTTLSLNISYANEMSMVAQSIGDIDIINAFKILHNDKRFSGNPAGITSYLYPGMGFGGYCLPKDTLALYKKSKDKGYEAKILNDILKVNDEILDFYANKIDKEVSKEENIAILGLSFKPGSDDIRDTKSATLISKLVKLGFKNIYAYDPIANEIFAKTYDYKIHYEANLNDIINQCNVLIIATAWQEFRPLISKQNKIIYNLRWMN
complement(1464975..1466087)       PHAGE_Synech_ACG_2014f_NC_026927: long tail fiber distal subunit; PJ17_07530; phage(gi100279)     3.47e-08            MNNCFTNPIVNEDLEYIFNSLTQEQKNKFKNSTILFTGCAGFLGFYFIHFFTKYANKLNINKIIALDNFMLRKPKWLENLTHEYQDTLELHKFDIISDKIDFLENACKADLIIHAASIASPMFYRTYPIETLDANIWGLRSLLDFYKDKNIKGFLFFSSSEIYGDPDISQIPTDEEYRGNVACIGPRACYDESKRFGETMCSLFAQKFNIPITIVRPFNNYGPGMSIEDKRVPADFAKAVMEGENIEILSDGSPKRTFCYIADAISGYLKALVYGKFDYFNIGIDQPEISVKDLSNIYAKHSKEIFNFEPQISFAISKDKNYLKDNPNRRCPIIDKARNKLNYNPDILVDEGVGRFLKFLKFEKENGELL
complement(1466106..1466900)       PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; PJ17_07535; phage(gi100148)      3.21e-12            MKVLILAGGLGTRLSEETSLKPKPMVEIGGKPILWHIMKIYSHYGFNDFVILTGYKGHVIKDYFINYYTQYSDITVDMSDNSVQIHNTRHEPWKVTMLYTGQDSMTGGRILHAKPYVGNETFMLTYGDGVSDVNIKELVNFHKSHGKAITMTSVLPEGKFGALDIDNNTNRIKNFTEKPKGDASLSNAGWINGGFFVCESKVFDYIKEGDETVFEQAPLRNLAQDGELYSYKHHGFWKCMDTLKDKNDLTKMWINNKAPWALWN

#### region 3 ####
complement(1694205..1694573)       PHAGE_Paenib_Vegas_NC_028767: antitoxin HicB; PJ17_08745; phage(gi971741660)         7.51e-05            MKKDINYYLNLPYKINLVKLDDGDYFAQFDDKELNKLVLMAGDGKTPNEAIEDLKNAFACYLEEALAKNEFIPEPIQKDKSKNLAITLKNSLVDEIDFYSKKMGLSRSAFLAVSAKAYIKTL
complement(1694570..1694797)       PHAGE_Paenib_Vegas_NC_028767: toxin HicA; PJ17_08750; phage(gi971741659)             1.89e-08            MNNKEKLIKELENNPKNASFANIEKLLSWYGYKLVSIRGSHHKFKKDNKSIIVPLHKPIKEFYVKQILKLLKDEK
complement(1694916..1695221)       hypothetical protein; PJ17_08755                                                     N/A                 MILGSIAVVIETFFIYENTKQGFDNIDKVNIVLNLLHTLRNRACHFENLLKIRENDNKLYPRISTKEKGTNIGLMPDKIENFLNDLICLINKDLLDYLNRG
1695324..1695336                   attL                                                                                 N/A                 TATCTTTATCTTT
complement(1695345..1695557)       hypothetical protein; PJ17_08760                                                     N/A                 MLGLEFIFSKQRLEHYKDINEHFENLKLISKIMPKIAILEIYLRNALDYELNSNCKEWIKISDNPFYWLK
complement(1695560..1696699)       PHAGE_Thermu_IN93_NC_004462: hypothetical protein; PJ17_08765; phage(gi194462977)     1.12e-11            MAIDRKDYNIPIGKGTHLKRHKDKINSFLFRMQNGGKEKQHAFTIPLRPAWNENEYIRIALARAKEYENEFKKLFSVGYALNSSILIKNIFEIFIKTNYNIKDLNEQHKGHIRNLISIFNNHILEPLGNIHLDELTLYKVQEFYNGMKNKGLEPKTYNRAIKEVLSPMIRYAVKNKWINENVTLGLKLDRVQNKKLVTNPKGKYEAILNAILELYKDNLLYKALFLLIHSGRRRDEVLSLLWQNVDLERKTIFLPKTKNGEAQEHALDDECYNALKALKDEVKQDKGLVFVSSVSGKKISNLARQEAKIRELSGVKEWTPHFSRHIKASFLMQNGVNPAVISGALGHRDLSTINIYATNDTLKASQRANEALKKLQEKD
complement(1696997..1697081)       tRNA                                                                                 N/A                 GCGGATGTGGTGAAATTGGCAGACACGCCAGACTTAGGATCTGGTGCAGCAATGCGTGAAGGTTCAAGTCCTTTCGTCCGCACCA
complement(1697086..1697162)       tRNA                                                                                 N/A                 GCGTTCATAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCAGAGGTTCGAATCCTCTTGAGCGTACCA
complement(1697177..1697253)       tRNA                                                                                 N/A                 GCGCTCGTAGCTCAACTGGATAGAGCAACAGACTTCGGATCTGTAGGTTATGGGTTCGATTCCTATCGGGCGCACCA
complement(1697257..1697333)       tRNA                                                                                 N/A                 GTGAGTGTAGCTCAGTCGGTTAGAGCATCAGATTGTGGTCCTGAGGGTCGTGGGTTCAATTCCCATCACTCACCCCA
complement(1697358..1697435)       tRNA                                                                                 N/A                 CGGGGTGTAGCGCAGTCTGGTTAGCGCACTTGGTTTGGGACCAAGGGGCCGAAGGTTCGAATCCTTTCACCCCGACCA
complement(1697478..1698326)       PHAGE_Phormi_MIS_PhV1B_NC_028998: hypothetical protein; PJ17_08795; phage(gi100018)     3.97e-17            MRFVFLICCACLVFANEILLLSKFDKQDFNSKDFNAYLMSEKLDGVRGIWDGKYLKTRQNYKIKTPDFFTKNFPPFAIDGELWIARNKFDEISALIRSGDSNLTLWKEVTYNIFDVPNACEEFQISTCTLKNRLAVLEEYLQKYPSAYIKIIPQIPVENQNNLNQFYESIIKNQGEGIVIRKNLSPYEKGRSKNAMKLKPYDDAECELVGFRKGKGKFENQVGALLCKMPNGQIIKIGSGLKDEDRKNPPKIGSIVTYKFNGLTKNSLPRFPVFLRIRDENP
complement(1698326..1698988)       hypothetical protein; PJ17_08800                                                     N/A                 MKTRILAIFFIFTSLLYADENPFKTDQNITLVAPPEFQKEEVKFNSSARILKSITFNYINLDGSEDKIDLDVNKSIDWHDTYTISRFKSPDPSKVLDVSVTIPEKNSSKQESNSTANVEIPLQVAKIYDFISYAVYKNKIKLNTSDEMITDFSVGNPSKIVIDFRSKMISPTKNIRLSNSIFKRIDFGSHKGYYRLVIYLDGTYNYNIQKDATGYMINLL
complement(1698978..1699181)       hypothetical protein; PJ17_08805                                                     N/A                 MIFWAFLVVIGAIYFGNMFFGQYSLDTLLSLENTKEELNKKIILLKEQNAKAQKDYFELKGLYPNEN
complement(1699247..1700491)       PHAGE_Strept_20617_NC_023503: enolase; PJ17_08810; phage(gi588295080)                1.32e-140           MLVIEDVRAYEVLDSRGNPTVKAEVTLSDGSVGAAIVPSGASTGSKEALELRDNDERFGGKGVLKAVANVNETIADEILGLDAFNQTQLDDTLRELDGTNNYSNLGANATLGVSMATARAAAAALGMPLYRYLGGANASILPVPMCNIINGGAHANNNVDFQEFMIMPFGFTSFKEALRSVCEIYAILKKELANSGHSTALGDEGGFAPNLANNTEPIDLLMTCIKKAGYENRVKIALDVASTEFFKDGKYHMEGKAFSSEDLIERYVELCAKYPICSIEDGLAENDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKPNQIGTITQTMRTVRLAQRNNYKCVMSHRSGESEDAFIADFAVALNTGQIKTGALARGERTAKYNRLLEIELESDEYLGEKL
complement(1700491..1701522)       PROPHAGE_Escher_MG1655: DNA strand exchange and recombination protein with protease and nuclease activity; PJ17_08815; phage(gi16130606)     5.49e-150           MDDNKRKSLDAALKSLDKTFGKGTILRLGDKEVEQIDSIGTGSVGLDLALGIGGVPKGRIIEIYGPESSGKTTLTLHIIAECQKAGGVCAFIDAEHALDVKYAKNLGVNTDDLYVSQPDFGEQALEIVETIARSGAVDLIVVDSVAALTPKAEIEGDMGDQHVGLQARLMSQALRKLTGIVHKMNTTVIFINQIRMKIGAMGYGTPETTTGGNALKFYASVRLDVRKVATLKQNEEPIGNRVKVKVVKNKVAPPFRQAEFDVMFGEGLSREGELIDYGVKLDIVDKSGAWFSYKDKKLGQGRENSKAFLKENPEIADEITKAIQNSMGIEGMISGSEDDEGEE
1704084..1704096                   attR                                                                                 N/A                 TATCTTTATCTTT
