gi|00000000|ref|CP010307.1|  Campylobacter jejuni subsp. jejuni strain 00-6200, complete genome. 1670781, gc%: 30.53%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
1216494..1216505                   attL                                                                                 N/A                 TCTTTTAATTCA
1216799..1217974                   PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; PJ18_06350; phage(gi16130540)     2.59e-36            MAKINKLTDSFLKSIKCESDKKFIKFADPSLKGLYVFIYPSGKKLFKIRQANDTYIKIGEYPLLSLAELREIALNAFKLKAKGQNIKNAKRLKFGDIYDEVLEKCKADGLSLKEIQRGLKYKNGVFKNFKDVDIESIKRSHVIETLKTIEHQIPTLIKAKGWINKIFKYALQLEIVENNPVTSIDNSIVFKKASKVIHQPTLLENDKIKEYILALKNSDLKKTHKNLMLFNLLTAQRPGNVIKATWDEIDLKNAIWTIKAEKMKMRKEHIITLNSQALKILKEQKKMKVNDYIFAGSSKNGCNSENITCNINKRLGYKGIQSAHGFRAMFRSLANEHQLDHGVSMDIAEQCLAHEQKNAILKAYNRSENIELKRKLMQWWGDYIEKLAGDF
complement(1217971..1218177)       DNA-binding protein; PJ18_06355                                                      N/A                 MAKFGKIEKLLSTKEVAEYLGFTPLKIRKMRMRVNQNKFNFPKGIKIGSTFKYEKAEIDKWLQTCKVI
complement(1218179..1218532)       hypothetical protein; PJ18_06360                                                     N/A                 MKEFKEYIKAKIALEKELENTQEMLKQTIKEMLLLRNDNAFNQNANDEMLKAINKNWKITASLESLSDTLEIKVLEQSTSYNRFCFGDVLILISNFLSYEEQKAIIAKLGFDLEKGV
complement(1218550..1219305)       PHAGE_Lactoc_Tuc2009_NC_002703: putative methylase; PJ18_06365; phage(gi13487817)     2.35e-124           MFHPQLYNDHFQNFKRYNIPKAQLVIADIPYNLGNNAYASSPEWYINGDNKNGESKKANKAFFDTDNDFRVSEFMHFCSKMLIKEPKECGKSPCMIVFCSFEQQTMLIEVAKKYGFNHYINLVFRKQSSSQVLKANMKIVGNCEYALILYREKLPKFNNDGKMIYNCMDWQKDEGIPKVHPTQKPVKLLERLITIFTDAGDVVIDPCAGSGSTLLAATNLNRKAYGFEIKKDFFKSANEIMFKHIERSLFA
complement(1219283..1219549)       emm; PJ18_06370                                                                      N/A                 MKKNTNQQLEQLKELNQGELNQEIEVLTKRALAIHRSIQRVKDERSILNQNIKDYQSEFNEIMEKIAFLKEPNLFNQKGSDDVSPTAL
complement(1219533..1219904)       hypothetical protein; PJ18_06375                                                     N/A                 MNITRELEAYDLAKLVLNNDLKYFFKDAKIVGENKERRLCFYFSDSFVLALFEKEKENILQRLREEYKKKLEFYKRIDLVFYSIAAKGINELKARSKEEQEVLERGLLKLENIIKRIKNEKKY
complement(1219905..1220129)       hypothetical protein; PJ18_06380                                                     N/A                 MKVNFIFKGTIKCSKCNLEFVPNSKFFKGLDEIIGDVKSVSLDGFCPECDNKLKATFEVEKITRELSKTYTMRC
complement(1220138..1220899)       hypothetical protein; PJ18_06385                                                     N/A                 MRSTTRNKSIDEFAKDKFKGIKTNDKFYPFKMRYINIKPRNKSLSNTIIILDNSKACFELSKKNKKAKDYYIEVQFNGLYQPSKQIEAEVWKILSKMIKRFKAYSVDIACDFDDDLAVSKPREFKHQERFSKLKIFGDFHTYKTSMYINNPQSKYYKLERILLYDKYEKQKHYHKENIKREFVRWKRLELTLKIKDKFLDRIENDINDALDLMQDYLRMIGIWHFNMRVILEQTKYLNNPRWAKTFKPYALAS
complement(1220836..1221150)       hypothetical protein; PJ18_06390                                                     N/A                 MSFKPIQKDNDAFKKAQRAKVIESLAMRGYALVKISSNGFLMKKGFEKDILCKQIIAQDTTASVSLSTKKPFTNTLKDGGFLKKCEAQQEIKALMNLQKTNSKA
complement(1221229..1221549)       hypothetical protein; PJ18_06395                                                     N/A                 MSNKPYLENEIKALKYQLLIEKQKHKKTKEKVFKLKNIQGEKYEKLKAEFAKNQLFVFRDDELFLWVESLMRELKTKILCTNDELSKKACDILVFKLEKRRKNFNY
complement(1221937..1222173)       hypothetical protein; PJ18_06400                                                     N/A                 MTSEELKQFCKEQGLTYKELAELIGFGEGAVKNAISTEKISFQMAHAINMLKKIFELEAKLEKAEAIKKDFKAWINEN
complement(1222187..1222954)       RloG protein; PJ18_06405                                                             N/A                 MTEEKENIVNFKIKIIHEENIELGIMANSLLSFQKLMDSFISKEHGITQSKIFLEKVETGSDIYSLVFEIAGEVLPIIAPIQALNEFIELIISFKNIKSKSIEEIEENPHFTKYNANNLKNIFAPVTINQNTFFINHKGEELLRINSDEAELIYENANYICEKKEIEYQKIHENALITMYKTTNKIDNKTKHKAKCDALSPYAVDVSFSDEKIAEEVLKNPYGFNFLVDLEYYKNDKNKIILYRIFNIKDKISLE
complement(1223092..1223322)       hypothetical protein; PJ18_06410                                                     N/A                 MEQEIAKIKKFKLECKNCETQIIIDTHNSIKNCPVCGLKFYDNLESPFENLHEQILLINKNKNVKVYFVCEEKEKR
complement(1223288..1223551)       hypothetical protein; PJ18_06415                                                     N/A                 MDKNLKKITELKIKCKNCDTKIITKIGNVIKTCPQCGIKFIDENLGYNLFEILTELFKSVSKNKNAEFYFVCKKECDGTRNRQDKKV
complement(1223608..1223895)       PHAGE_Campyl_IBB35_NC_027989: hypothetical protein; PJ18_06420; phage(gi937456610)     3.21e-29            MPSDRVEIELFTGFYDKKGNKIYEGDILYSFEGCSEDEAFKYKVVFKEGAFYLVECGDDGEEWDEDLLSEFCLEELEIVGNIHENAELLNENKPS
complement(1223948..1224679)       PHAGE_Stx2_c_86_NC_008464: DNA-binding protein Roi; PJ18_06425; phage(gi116222069)     7.52e-26            MNLELFKKDENKEISLTSLEIAELTGKEHFHVIRDIETYLEKVVEGGISKFGDTYQNTQNKQSYKYYRLPKREVLILVSGYSVELRAKIIDRLEYLENELKKQSYKPLSLKESLQMQLELLEKNEKLQVENQSLKNEAEQNAPLIHFANRIQNTNDAILIRDYAKILHEKNNLEIGEKRLFKILREKGFLMSDNKPYQKYIEQGLFKVSETTVSTINGDRLVSTTKITGKGQIAILKAILKAS
complement(1225110..1225394)       hypothetical protein; PJ18_06430                                                     N/A                 MKQAIKQKLGVSSITEAGLKLNLAHNVLNSWLSNNLTNAKVEIALLKLGLREDERLIKRIEKLKSEYKKNEIRKQAYEKYMREIKVLLEEIEAA
complement(1225391..1225594)       hypothetical protein; PJ18_06435                                                     N/A                 MIEARSILDVLSFRKTEEKEELRKCFNFSDEVFEKGLNFLHTNDEISIEAVSDGLFEKTIISIKVSK
1225799..1226452                   hypothetical protein; PJ18_06440                                                     N/A                 MSENKENISFENYEKNLKLQLESKRKDLDIQLTSIIPGQFQTIKLYMWLCTFIIAGDITILNNYIKTTHTDLFTIILFSVSIIFLGYCAFFSLLALKINNTIAFPQDQYGEMSKLNSDNLEHTNGINAMISSILDAFDKNNKIINNMSKDIGKIYVFLVIGASISFFAIITSGAQIVKGEIIMSDNKEKVIKPTPQTGTTTPIIPKTRGDKPEQEKK
1226687..1227349                   PHAGE_Pseudo_MP22_NC_009818: c repressor; PJ18_06445; phage(gi157834973)             4.32e-09            MENYYELVEELKTFFNVKSLEEVAERLGYKKNNANNWRNNKQLSAQALKKYYELKKANNSVSIHHHKDTITIRYFPDICASAGFGNANENENFQLINIDKAFLTDVLGVPYKTQYDMIKIYGESMEPFIQNGSFIIIDTTKNSLEKIRNADVVIFRDNDNELFCKRILKNAFDDDIVISSDNFNFGDKKIKKSALKNYVFIGVVVCSCNAKIFLNQIERV
1227355..1228008                   PHAGE_Entero_vB_KleM_RaK2_NC_019526: putative nuclease; PJ18_06450; phage(gi422937180)     1.48e-13            MKKLIILSLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYINCYDYSLKGTKAVAYRLEADNLKGEQIKKRPRFEDDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVLNLVNYDNNPQRIKNNIAIPSSYTKILKGDNFKECYQVPNHDVENENLRIYKVKCDNF
1228025..1228306                   hypothetical protein; PJ18_06455                                                     N/A                 MEIAGLVYFIFAVVCAFELSYDAKQRNMSSLWWGIVGFFFGIFGCILYLAVKKPYRREQKISKMRDLEFLRGLKEKRCISEAEYEKYKAEVLE
complement(1228435..1228854)       hypothetical protein; PJ18_06460                                                     N/A                 MINLLFGNAKLYIALALMAILTGYFYLRLDSTQAKLEKSQSDLALALKINENNQEKLKELNQIHKTELKALNEANNQKNQVQERVQYVKEYIYKSNENNITKLFNDVVDRLWDANSTSSNQNRNSKSKNSARTTNIKSS
complement(1229083..1229544)       PHAGE_Helico_KHP30_NC_019928: hypothetical protein; PJ18_06465; phage(gi431810564)     2.86e-10            MKITINRRYTGKTCVIGKFKVLDDDDKILFECFSLEEDKEGLESGKDLRIPEGNYNLKRHSPSRFENTLRSITKKDDDTMINVYNDDVPSSRAILIHWGNTDKDTQGCILLGLTKDNNNESVGQSRQACKEFYDLMHGKNLEDIKLEITNELA
complement(1229593..1230876)       PHAGE_Campyl_CP21_NC_019507: putative tail fiber protein; PJ18_06470; phage(gi422935209)     3.74e-37            MSVDLREIAIKTEEINKDFSEALEILKELFKNGVKPSDESIKNAINEVLTSFNFIKQSELKEKLEALLEELDINANINEESLKEVVLKVVLENQESLKGDKGDPFTYEDFTEEQLKNLKGQDGAKGADGKSAYELWLENEENTGKSQDEFLESLKAQTPTKEEIKPIIEEMLEDMKLNLGINGIKVSNSIPTPKTKANVNDLIITYNENVKQLWLCVASDDKYTSWINLLGNENITAQELIIISFDTNLNSGQYGGCLSDLRFGFENSLASTTQIIKGLNEGSFLITKDGMGLKSKNYTEVSVLSKPSKNQIEGNIKTSGIYNDPAWHNITNALKKYDGNANECCLWASNIKNSVSIELFTNEIPMSLFYRQAGYYGNVNLSNIKMQKALRVQNEIIVERSFIGIKKEIDKTTYGDNAFLFEFEEEK
1230692..1230703                   attR                                                                                 N/A                 TCTTTTAATTCA
complement(1230873..1231247)       PHAGE_Vibrio_qdvp001_NC_029057: tail protein; PJ18_06475; phage(gi985757190)         2.82e-10            MTKTELKRVCVKPYDKDRFEVIQDYEFILPNYKGIVPQGFKTDGASIPRLFWSLFPPFKSEYFSACVVHDFLCEKAKSRKDYKLADLVLKEAMQALGINKFKIFVFYCSCNLFHEIKCLIKGIR
complement(1231240..1231623)       hypothetical protein; PJ18_06480                                                     N/A                 MSTENIIKEGAILGSLSGSALLGLMVFVLAGIAWHLYKTLHKEAGERTKELISETKNTNVLIREQIAVSRASSDSLVKFIETHCSKTNDKLEAIETDLMRMDERLVKLTQIRNDELRSIFKKKENND
complement(1231620..1232255)       PHAGE_Nitrin_1M3_16_NC_024217: hypothetical protein; PJ18_06485; phage(gi643655223)     5.07e-14            MFYDLKNKSLKYDDIFLKDVKIQNEEGEIDAQDTYFLSACDDKLLKELGFAKVKEEEIPSFNEKIEELRQIQTYDEENNLYIISYEIKEKALEELKELKLEELKAIKEEKLLFMPFKNTIFQIDTEAKINISGKVSEIMLANLNNTPLENIAWIDKDNKIITFNKEEFLEFGVGIAKYTESIIFKNDELRNKVKNATSLEELNLIAWESEK
