gi|00000000|ref|NC_000000|  Mycobacterium simiae strain MO323 genome. [asmbl_id: NC_000000].5938797, gc%: 66.28%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
2135028..2135040                   attL                                                                                 N/A                 CCGGGCCGCCCGC
2137184..2137205                   attL                                                                                 N/A                 TTCGAATCCTGCCGGGGGCACC
complement(2141360..2142175)       PHAGE_Mycoba_Cooper_NC_008195: gp13; VC42_09730; phage(gi109392366)                  1.74e-104           MTSTMPPVTTYDRPLPIHFEAPAQNPTAFGLYASTTWTEIGEGEPSRHLHGVEIRGNSYPGDNASGVWDAPWCGDPAPGQLKTGERQGILDPFDPITVWAYDECDLTAPSRNEVQANAAQIFRLAEQTMVEREFAERLKLDAADLGPAQAAASFKQAVGYLEGAAAIAGTVLYFHAGAQWASQEFGLVVKNGTRWTSPLGHVWVFGGGYVEGLDDMIVATSQPFGWRDQVQIRTAIDERANLFAAIAERTVTVGYEACIAAVQITPEVPAP
complement(2142186..2142902)       hypothetical protein; VC42_09735                                                     N/A                 MSRAVKQFGTPAQRASLPNAPQRPARRYSQAELSERRRGGLSVHYTGQFSLTREIALMCEPLARRIAAADRPARFLHAPTAGAVPTLAEAVHEAVGIVVGWVAERDALAKTAHLAAEPGKRRAAITTLVDLAQRPALPEITDDMLAAGTWAAALTAMAAEVDAAFSDLLARAYPPGASELRGQTSRSDRLVALLRRTIDHAALALERRLDRDERADYSHPVQSTTDPRAELAALGINV
complement(2142899..2143150)       hypothetical protein; VC42_09740                                                     N/A                 MTTAVDHQTAHPRDRSMESWRARLGAMASRGETDGPRVAEARSALAWWKHRQSIVETGIPAERAEELADLIAANAATSEAVAQ
complement(2143372..2144013)       hypothetical protein; VC42_09745                                                     N/A                 MSASLALAIAQELRARGMDGARPGEPGEIGLSGAERRLAGGLGAKKVDVTWATEESGLMLACSVKTIMFRDSVGGHFQKNLTNRRGDLLFESTTLHRRFPFAVVAGFFFFDIGAASDHTPRRNSTFENVFPRFRLFTGRADPADRDEQFERLYVLLVDSNPFAPSVICHEVDSPEAPVALGVVFDDLIELTAERNFDMYETTGDGNIRKARSK
complement(2144102..2145769)       PHAGE_Paenib_Tripp_NC_028930: DNA methyltransferase; VC42_09750; phage(gi971757040)     3.02e-08            MLGADHGDTAALRKARGAFFTPEAVARYITEWAVRSTSERILEPSCGEASFLLAAVDRLAALRSPGDGDQFAALDGVELHDGSARAARKLLRDAGVAARVTVSDFFCVEPTGSYDVVIGNPPYIRYQEFSGSARARSRAAALRAGVGLTNLASSWAAFAVHSALFLKPGGRMGLVLPAELLSVNYAAEVRRFLLASFARVDLVLFTERVFPDAQEEVLLLLADGYQEGPTDHASIYQARNAAELATIAAGRTWTPTRPEEKWTPSLLSADALSAYTGLLSSGGFTVLEAWGDTTLGMVTGNNKYFALSPARVADLGLEATDVLRLSPPGSRHLRGLAFGTAALNELGRSGSATWLFRPPGEPSAAAWAYIAAGEAAGVHTAYKCRVRRPWWRVPNLAPADLLLTYMNADTPRLSTNTAKAAHLNSVHGVYLAPNLRKLGKALLPLASLTSMTLVGAETVGRAYGGGMLKLEPREADRLPVPPAALVEAAADHLTTIRPQVAGLLRTGKLLEASKLVDDVLLVGELGMKRADVRVLRDAHAELTARRVARGRRGTD
2145964..2146176                   hypothetical protein; VC42_09755                                                     N/A                 MKVSANLSDVTITLGNKGITLHIADNQGKHVGDLRLGRSTGEWMKGRTREGNGVKFQMTKLIDVLNELGE
complement(2146201..2146794)       PHAGE_Mycoba_Dori_NC_023703: gp86; VC42_09760; phage(gi593775775)                    1.15e-94            MTTATAPATGQLLGYARVSTGHQSLDAQTDALTAAGVDSARVYADKLTGTSTREQRPGLAGLLDYAREGDTIVVAGIDRLGRNAAEVMLTIRDLGERGIVLRSLREGIDTSNATGRMVAGVLASLAELELELGRERRAAAKASRKARDLPIGRPRALTADQIRQAEALRASGEPVPVIAETLGVSRATLYRTLAEKG
complement(2147045..2147536)       PHAGE_Mycoba_Dori_NC_023703: gp84; VC42_09765; phage(gi593775773)                    3.48e-15            MTITTSEDAIKAAASVARDVADGKLAVAELERQAVAELSELVGTVTGPDDPVWPLQVQIARGVLAAGGIAATEFLEWAAVERHRAGEPVSPPDPQPEPEALADLEPPEPEPIAPELADAKTAAEPEPEPPAVELVEQPAPPRRADGYDPLAHWPPSRSLRRPL
complement(2147533..2148027)       PHAGE_Mycoba_Dori_NC_023703: gp83; VC42_09770; phage(gi593775772)                    1.18e-11            MTRYLDSRHRAEQAERLAATGATWQEIADQLGYRSRQAASQAVKRLRDRTPPETVEQARAKHDRALQLIQRNGFTRYMVALEEGDDDTALRYAKELRSTIAERAKLAGAYAPERTEVDVNVSTDPRAIIDRLETELLALVAQRQPQTAIGGGTIIDAEVEEITR
complement(2148730..2150535)       PHAGE_Paenib_Vegas_NC_028767: DNA primase; VC42_09775; phage(gi971741650)            7.84e-06            MDENTASSGSHAAAEAAEANGHNGHRFADDLSDLPADFGKALAKRQARIEHERPPSPYDKRREKFAAASAVKKAAIVVSGRYAADACTGLTPAGRACLSQLMAVKWADLAAVAGLTGSPPTENEVTAWHAARGRTWNPPAANGIASLTDVKVATAGIDPKVRYALADVVSAAHDGQPWAAKVIDTAQAENAYAALVGDRKQRPVSLTPAQLFDRGAPLDAIRALPDETKLTRGQSARIVRAWDAEERLRAAEQAHAIEAAKAVAAIEIPGRINLATYTPPDTAWLVDGLMPMNGSLGLFAERKAGKTTTVVELVRAVLSGEEFLGRFATNLPAGARVALLDTEMTPAMLHHEYTKVGMDADHLDRIDLHPLRGRSRLLDLRDETTRARWRELIAPGSVIIVDCLYTVLAAAQVDESSAQVSDIIDGIKALAVESRAAGLVIVHHLGKDPGKGARGHSSIEGGVDTLATIWLDGPPAADTPRLFSATGRLDVDVPTALLRRGDDFRLTLSTSTPKADRAKAVDHKDDDIAWELISDHPGKSLRGLENLPTETRKLSRTRLRRALERLDLLGYVVNQGTPDRPAWYAADRNGDPMNGPAPLAD
complement(2150680..2150904)       hypothetical protein; VC42_09780                                                     N/A                 MTAVTFANPDLLFTSRDVAEYRHTTETALAQERWRGDGPRYLKLGRRVFYRAADLQAWLAEHTITPTPAVAQRD
complement(2152726..2153001)       hypothetical protein; VC42_09795                                                     N/A                 MGVVARTLAIVVSPLAAIFIPEVQFAIPLCAGPTGRPDGQRSVDGRANAFGRQTWAHGAPLGVRRRRRLPWRGWGIGNGRPETSQLDATMR
complement(2153374..2154564)       PHAGE_Mycoba_Tiffany_NC_028757: integrase; VC42_09800; phage(gi971740586)            1.10e-85            MARQNAAKAERTRRSFGRLRQLPSGRWQSSYLHNGVVYKALATFPTKSSAGHWLQAEADLIDLDRRRPGEWTPPAERAAKAKATKLTLRTYATAWLENKTKLTRRTRDNYRGHLDNQILPALGDLGLAEITPEHVRTWFAGLGGTHETRNAQAYAVLNGVMNTAVADDLIDRNPCRIKGAAQVKHARRSVVLLDAAQLTELAEKMPSELRLAVLLAGWCGLRKGEVFALRRGDVAADGSSVRVERSVTYRERRFEVGPTKTRESRRVVSVPPHVRPAVLEHLQHHVGDGGEALLFTDPTTGSFHGEWQFRGPWDAARAAIGLPDLHFHDLRHAAGVMAAQTGATLRELMDRLGHTSPNMSMRYQHTAEGRAAALADRLSALAVTNPPKSGNSSTTT
2154731..2154752                   attR                                                                                 N/A                 TTCGAATCCTGCCGGGGGCACC
complement(2154942..2155757)       PHAGE_Gordon_GMA6_NC_030906: prohead core protein protease; VC42_09805; phage(gi100061)     1.33e-16            MSNRHNDATSDRQRPFYVATGDEEQIFTAAYHQRLSIVLKGPTGCGKTRFVEAMAHDLGRPLITVACHDDLTTADLVGRFHLRGGNTEWVDGPLTTAVRQGAICYLDEIVEARQDTTVVLHPLADHRRQLPIERLGITLDAAPGFGLVVSYNPGYQSVLKDLKDSTRQRMIGIEFDFPTPEIEHNILIRETGVPADIAKALVQLAQAIRRLETSGLREVASTRVLIAAARLTTHGITPRAAAQSAIAAPLSDDPAVQTGLRQLINTYLPPR
complement(2155826..2157505)       hypothetical protein; VC42_09810                                                     N/A                 MGAENAARFDLLASALAGRTLRVVYGDQGEAPWTDGAIVIVDPASSDRDQLAAVTVQACLIRAGSLQPETLRSMRRRPKLAARYLTVEGHRALHGNAALLPPALRPLVDIQTAVRSTCPAASLTMATSRQPIAQPPTVFGTIRVGKILAAQHTTDPATDASQQHHVPKRQHADLSELDDEDDIDDDVAGAAAELFSVAGASGPLGKLLTRLLKAVRSGDGHGSPGTDTATHLGRRSTTRRGVSVLSAATGAVVDDTGTPTGAWTYPEWDATRKRYRPDWCTVNHTEPPLRTHQPVVVGSDSVRLRHTLARLTLGLDRRHRQPFGDDIDIDAAIDALVQAQVSSTPDDNLYIAPLRRRRDLSVLVLLDISGSAGEPDGHGATIHERQRSAAAAITGVLHELGDRVALYAYNSHGRSAVHIFPVKDFDDRLDSATLQRLHSLTPGAYSRLGAAIRHGAAMLETRGGTTRRLLIVLSDGLAYDHGYDREHGAADSRRALAEARRSGTGALCLTFGPTTDAASLQRVFGSAAHATVTDHNSLPDAVSALARTALRSADVRKAG
complement(2157543..2158664)       hypothetical protein; VC42_09815                                                     N/A                 MAAQQSEIKHPVDPVRRRRAVVTALWWAIGIGVLVFVGMHAKLGANEARIANPHPSEEVRRAVDGLPNWAPMCNIWTLVMMLVGGAAFVYGWRKHPKHPYLLLVLAGTALPWLDPQADWVSYSVFSPDLWHFPVDWPWVSVSPLVEPFVCIAYASVLIVPAFVAIPLLRKLQGRRPVDSFVWRHPLITLSAITFVIGFALDAVVEIFCLSKRVYGYSQVPEFGSIFVGQYNQFPLLWESGLATSMMIAASIMVYRDDTGRTQAEKLAQRLRLLPTRPALASFLVMFLALTLAYFAVYGGGFLIIRAAKLSTSVACPWPFPETKVYDPQGFYEQNGHPGPFFEGKWNTWLSGQPDGRPTITGPVAAGRCGPGHT
2158900..2159517                   TetR family transcriptional regulator; VC42_09820                                    N/A                 MMPGPNQRVAQRQKTRERLLDAAVVEFTRVGTAAADLNAVVAAAGVGRSTFNFHFPTREHVLLELIRQEEARVAEDIGRFVESRRDLPAVLNEIVRLVTDLEDRWGPLLFRDVLGLYFSPARPQDDAWTDHPTIVLLAAEILRARNRGQTRSDVDSFHSAVFFLLGLYALLTTLPAAVPDRESLLNKYVTSALYSIGMPAPAPVS
complement(2159675..2160469)       PROPHAGE_Xantho_33913: IS1477 transposase; VC42_09825; phage(gi77747809)             2.49e-54            MLGVSERFACRVTGQHRATQRHEPIAAAPDDPDAALRDWLRAYAKKHPRRGVRPAYHDARGEGWEVKHKKIQRLWREEGLRVPQRRKRKRHGASTAPPAVMADRPHRVWAVDFQFDVTTDGRPIKILSIIDEHTRECLGGMVERNITGDHLIDELERVAAHRGTDPTVLRCDNGPELACSAMADWASGRVGLHFIPPGEPWRNGYVESFNSRIRDECLNTNSFWSLAQARVVISDWKHDYNHHRRHSSLGYQPPARYAAACTHR
2175021..2175033                   attR                                                                                 N/A                 CCGGGCCGCCCGC
