gi|00000000|ref|CP011113.2|  Escherichia coli strain RR1, complete genome. 4587291, gc%: 50.82%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
551541..551587                     attL                                                                                 N/A                 CTTCTAAGTCGTGGGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATT
complement(551601..552764)         PHAGE_Shigel_Stx_NC_029120: integrase; SR35_02660; phage(gi985761248)                0.0                 EscherichiacoliMSLFRRNEIWYASYSLPGGKRIKESLGTKDKRQAQELHDKRKAELWRVEKLGDLPDVTFEEACLRWLEEKADKKSLDSDKSRIEFWLEHFEGIRLKDISEAKIYSAVSRMHNRKTKEIWKQKVQAAIRKGKELPVYEPKPVSTQTKAKHLAMIKAILRAAERDWKWLEKAPVIKIPAVRNKRVRWLEKEEAKRLIDECPEPLKSVVKFALATGLRKSNIINLEWQQIDMQRRVAWVNPEESKSNRAIGVALNDTACKVLRDQIGKHHKWVFVHTKAAKRADGTSTPAVRKMRIDSKTSWLSACRRAGIEDFRFHDLRHTWASWLIQSGVPLSVLQEMGGWESIEMVRRYAHLAPNHLTEHARKIDDIFGDNVPNMSHSEIMEDIKKA
complement(552884..553147)         PHAGE_Entero_YYZ_2008_NC_011356: putative exonuclease; SR35_02665; phage(gi209427739)     1.38e-57            EscherichiacoliMKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYFANYDPRMKREGLHYVVIERNEKYMASFDEMVPEFIEKMDEALAEIGFVFGEQWR
553237..553473                     PHAGE_Escher_PA28_NC_041935: hypothetical protein; SR35_02670; phage(gi100032)       1.13e-44            EscherichiacoliMVTNLYQNMRANALADAELRRKAADELTCMTARINRGETIPEPVKQLPVMGGRPLNRAQALAKIAEIKAKFGLKGASV
553470..553565                     PHAGE_Escher_PA28_NC_041935: replication and recombination DNA helicase; SR35_02675; phage(gi100033)     6.78e-14            EscherichiacoliMTGKEAIIHYLGTHKSFCAQDVAAVTGATVI
553628..553927                     PROPHAGE_Escher_MG1655: IS3 transposase A; SR35_02680; phage(gi226524700)            6.69e-65            EscherichiacoliMTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK
553924..554790                     PROPHAGE_Escher_MG1655: IS3 transposase B; SR35_02685; phage(gi16128284)             0.0                 EscherichiacoliMKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA
555101..555433                     PHAGE_Acinet_Acj61_NC_014661: putative quaternary ammonium compound-resistance protein qacE; SR35_02695; phage(gi311992758)     4.38e-10            EscherichiacoliMNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH
555481..555630                     membrane protein; SR35_02700                                                         N/A                 EscherichiacoliMSLVLCFLLMSLFFMYSFVLSRLWRKKIAIRLLLYIQDNVTLIVFLNKK
555688..557214                     PHAGE_Burkho_Bcep176_NC_007497: gp53; SR35_02705; phage(gi77864678)                  7.01e-37            EscherichiacoliMKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQAISALKYMVDGEIYF
557679..558230                     hypothetical protein; SR35_02710                                                     N/A                 EscherichiacoliMKTLIVSTVLAFITFSAQAAAFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALVGYMLNANKIATAEITPVYEIK
558240..559037                     transcriptional regulator; SR35_02715                                                N/A                 EscherichiacoliMLARGKTNLKIEEIRMHKHHEIHRVKPLMPALCRIRQGKKVINWETHTLTVDNNQIILFPCGYEFYIENYPEAGLYLAEMLYLPIDLIESFQKLYTVTDQIRNKTSFFLPQNPELIYCWEQLKTSVSRGFSTKIQEHLAMGVLLSLGVNHVNHLLLSYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE
559252..559707                     PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; SR35_02720; phage(gi401817579)     2.41e-79            EscherichiacoliMNLSQDGIKLHRGNFTAIGRQIQPYLEEGKCFRMVLKPWREKRSLSQNALSHMWYSEISEYLISRGKTFATPAWVKDALKHTYLGYETKDLVDVVTGDITTIQSLRHTSDLDTGEMYVFLCKVEAWAMNIGCHLTIPQSCEFQLLRDKQEA
559707..559877                     PHAGE_Escher_HK639_NC_016158: NinE; SR35_02725; phage(gi356870663)                   4.54e-20            EscherichiacoliMATPLIRVMNGHIYRVPNRRKRKPELKPSEIPTLLGYTASLVDKKWLRLAARRSHG
559870..560160                     PHAGE_Salmon_118970_sal4_NC_030919: replication and recombination DNA helicase; SR35_02730; phage(gi100033)     2.58e-42            EscherichiacoliMADLRKAARGRECQVRIPGVCNGNPETSVLAHIRLTGLCGTGTKPPDLIATIACSACHDEIDRRTHFVDAGYAKECALEGMARTQVIWLKEGVIKA
560157..560519                     PHAGE_Salmon_118970_sal4_NC_030919: membrane-associated initiation of head vertex; SR35_02735; phage(gi100034)     5.08e-38            EscherichiacoliMNTYSITLPWPPSNNRYYRHNRGRTHVSAEGQAYRDNVARIIKNAMLDIGLAMPVKIRIECHMPDRRRRDLDNLQKAAFDALTKAGFWLDDAQVVDYRVVKMPVTKGGRLELTITEMGNE
560516..560656                     PHAGE_Entero_mEp237_NC_019704: hypothetical protein; SR35_02740; phage(gi435439319)     2.69e-14            EscherichiacoliMMFEFNMAELLRHRWGRLRLYRFPGSVLTDYRILKNYAKTLTGAGV
560742..561125                     PHAGE_Shigel_Stx_NC_029120: antitermination protein Q; SR35_02745; phage(gi985761278)     3.75e-71            EscherichiacoliMRDIQMVLERWGAWAANNHEDVTWSSIAAGFKGLITSKVKSRPQCCDDDAMIICGCMARLKKNNSDLHDLLVDYYVVGMTFMSLAGKHCCSDGYIGKRLQKAEGIIEGMLMALDIRLEMDIVVNNSN
561267..561485                     hypothetical protein; SR35_02750                                                     N/A                 EscherichiacoliMLGRQRLPQHIFFVIRLELVNQTYSNDVISAYTECFREGANKRGNSSRLTQSFHFFMFEPIFSPVNALNQPI
complement(561523..562503)         PHAGE_Bacill_BMBtpLA_NC_028748: IS5 transposase and trans-activator; SR35_02755; phage(gi971482498)     0.0                 EscherichiacoliMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH
complement(562572..562982)         PHAGE_Entero_DE3_NC_042057: replication and recombination DNA helicase; SR35_02760; phage(gi100033)     9.72e-96            EscherichiacoliMAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLKKVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRWITNIHEHKRYYYTFDNSLLFTESIQNTTQIFPR
563268..563474                     PHAGE_Entero_DE3_NC_042057: membrane-associated initiation of head vertex; SR35_02765; phage(gi100034)     6.10e-43            EscherichiacoliMNKEQSADDPSVDLIRVKNMLNSTISMSYPDVVIACIEHKVSLEAFRAIEAALVKHDNNMKDYSLVVD
complement(563639..563833)         PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; SR35_02770; phage(gi157166037)     1.68e-25            EscherichiacoliMSTKNRTRRTTTRNIRFPNQMIEQINIALEQKGSGNFSAWVIEACRRRLTSEKRAYTSIKSDEE
563981..564082                     DNA-packaging protein; SR35_02775                                                    N/A                 EscherichiacoliMIIIIILWVLSGDPTGYGAATSRVFAIYENFPV
564222..564767                     PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; SR35_02780; phage(gi100035)     4.64e-128           EscherichiacoliMEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG
564742..565485                     PHAGE_Entero_DE3_NC_042057: DNA polymerase; SR35_02785; phage(gi100036)              3.93e-65            EscherichiacoliMNISNSQVNRLRHFVRAGLRSLFRPEPQTAVEWADANYYLPKESAYQEGRWETLPFQRAIMNAMGSDYIREVNVVKSARVGYSKMLLGVYAYFIEHKQRNTLIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDAEAEKLFRIREAEETKNSLMQVASEHIAPLQDAVDLEIATEEETSLLEAWKKYRVLLNRVDTSTAPDIEWPTNPVRE
569445..569491                     attR                                                                                 N/A                 CTTCTAAGTCGTGGGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATT

#### region 2 ####
1184004..1184017                   attL                                                                                 N/A                 ATTCATCTTATTTT
1184059..1184952                   integrase; SR35_05815                                                                N/A                 EscherichiacoliMRSPICHLFSAINSSPFKIAPEKEQDLKTIVDDKKIIISVVSEPGFNIRVRKNESNNSHEIVLTVASLEYIWAFSNFFWVFTQEYSKSQKNNDEHFDLTGKNRLKKSDELLKWARKNLQTTGCESWPKKCPKPEAYLQGSEDSQVASEIFLCAIAWILHHEISHVVLQHPLVTTAFSTQEEREADSHATKWILGNLYESAPELKKRALGIATAVLCIQSLEVENYFCLQNTHPAAYERIYSNISCYPVGNEELIEALCTVMLQYLFHGKNINVNLDGESFSSILGDLLCDISRLTSN
complement(1185043..1186170)       PHAGE_Entero_HK022_NC_002166: integrase; SR35_05820; phage(gi9634144)                7.90e-69            EscherichiacoliMAARPRKNNVSVPNLYPLYSRKVNKVYWRYKHPVTGKFHALGTNEAEAIAIATEANTRLAEQRTRQILAISDRIATSKGKAITTSTWLDRYQAIQDDRLKSGDIRLNTYKQKAKPVSLLRERAGMKLISAVDVRDIAQLLDEYIAAGRPRMAQVVRSVLIDVFKEAQHYGEVPPGYNPALATKQPRRKITRQRLSLEEWKKIFDIADATHRYMGNAMLLALVTGQRLGDISRMKFSDIWDDHLHVIQEKTGSKIAIPLSLRLNAINWSLRDVVARCRDYAVSAYLVHFFRSTSQAERGAQVKANTLTMNFSKARDLARIDWGEGSPATFHEQRSLSERLYKEQGLDTQKLLGHKTQQQTDRYHDDRGKGWSKVAL
complement(1186151..1186396)       excisionase; SR35_05825                                                              N/A                 EscherichiacoliMLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPVIKKNDSLLLQRILSNGSQTA
complement(1187140..1187448)       PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; SR35_05830; phage(gi401817573)     9.10e-15            EscherichiacoliMNEQNLKHVIALLLEDAKRLQQIEPNAGTEARILLAKQALKTCGAQAPGRTEFMNFMANTLTPLPCNGEKVSRVYHDTMVKALRIELDGLRRKIVMNEIVTN
complement(1187623..1188297)       PHAGE_Shigel_SfIV_NC_022749: repressor / cI; SR35_05835; phage(gi557307563)          2.29e-168           EscherichiacoliMKTIHDIRRSNARKLRDGVGGNSSFATMIDREPTQTSRFMGDGATKNIGDSMARHIEKCFDLPVGWLDQEHQTTNITKKPDVSITNKQITLVPVISWVQAGAWKEVGYSEVDLSTAETYPCPVPCGEMTYILRVIGDSMIDEYRPGDMIFVDPEVPACHGDDVIALMHDTGETTFKRLIEDGTQRYLKALNPNWPEPYIKINGNCSIIGTVIFSGKPRRYKIKA
1188388..1188588                   PHAGE_Shigel_SfIV_NC_022749: Cro; SR35_05840; phage(gi557307564)                     3.92e-41            EscherichiacoliMKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIYPKD
1188632..1189189                   PHAGE_Shigel_SfIV_NC_022749: DNA binding transcriptional regulator; SR35_05845; phage(gi557307565)     6.84e-127           EscherichiacoliMGKHHWKIEKQPEWYVKAVRKTIAALPSGYAEAADWLDVTENALFNRLRADGDQIFPLGWAMVLQRAGGTHFIADAVAQSANGVFVSLPDVEDVDNADINQRLLEVIEQIGSYSKQIRSAIEDGVVEPHEKTAINDELYLSISKLQEHAALVYKIFCISESNDARECAAPGVVASIASGCGETNA
1189186..1189524                   PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; SR35_05850; phage(gi557307566)     6.42e-77            EscherichiacoliMNSLTTHYRRSQLIALPVPGGKAKVEYCYAVNVPGDREIVTHSFAEWAVGDFNRQKETVLCDKLTAGSKITTECPSESFVGSRKHNGLSTSAKVMSMNASARSNSFVVNSGK
1189534..1190901                   PHAGE_Shigel_SfIV_NC_022749: large terminase subunit; SR35_05855; phage(gi557307528)     0.0                 EscherichiacoliMSTKLTGYVWDGCAASGMKLSSVAIMARLADFSNDEGVCWPSIETIARQIGAGMSTVRTAIARLEAEGWLTRKARRQGDGSSPHCAVVDEYHEHATDALYTTMLTGMGARRQPLMWAITTAGYNIEGPCYDKRREVIEMLNGSVPNDELFGIIYTVDEGDDWTDPQVLEKANPNIGVSVYREFLLSQQQRAKNNARLANVFKTKHLNIWASARSAYFNLVSWQSCEDKSLTLEQFEGQPCILAFDLARKLDMNSMARLYTREIDGKTHYYSVAPRFWVPYDTVYSVEKNEDRRTAERFQKWVEMGVLTVTDGAEVDYRYILEEAKAANKISPVSESPIDPFGATGLSHDLADEDLNPVTIIQNYTNMSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTIPGNDDVVKPVKEQAENKIDGAVALIMAVGRAMLYEKEDTLSDHIESYGIRSL
1190913..1191095                   PHAGE_Shigel_SfII_NC_021857: putative integral membrane protein; SR35_05860; phage(gi526244693)     1.59e-34            EscherichiacoliMIMLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCLFWSWLVARYLDRTQSSVGGGK
1191095..1191568                   PHAGE_Shigel_SfIV_NC_022749: portal protein; SR35_05865; phage(gi557307529)          1.24e-94            EscherichiacoliMFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCNLYHLNGSLKQRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKAFGEVAELLPVDPGCVVYALGRCQRWPEGDRRECYSAR
1191495..1192286                   PHAGE_Shigel_SfIV_NC_022749: baseplate protein; SR35_05870; phage(gi557307544)       0.0                 EscherichiacoliMWYMRWEGVSDGLKVTAGSVIQRDDLVQYTTTDDATSSGGVLRVPIACSSAGAVGNADDGTALILVTPVNGLPSSGVADTLTGGFDTEELETWRARVIERYYWTPQGGADGDYVVWAKEVPGITRAWTYRHLMGTGTVGVMIASSDLINPIPEESTETAARQHIGPLAPVAGSDLYVFRPVAHTVDFHIRVTPDTPEIRAAITAELRSFLLRDGYPQGELKVSRISEAISGANGEYSHQLLAPVDNISIAKNELAVLGTISWT
1192277..1192861                   PHAGE_Shigel_SfIV_NC_022749: tail protein; SR35_05875; phage(gi557307545)            2.34e-138           EscherichiacoliMDVTNDDYIRLLSALLPPGPVWSASDPAIAGAAPSLTRVHQRADALMRELDPRTTTELINRWERLCGLPDECIPAGTQTLRQRQQRLDAKVNLAGGINEDFYLAQLAALGRPDATITRYDKSTFTCSSACTDAVNAPEWRYYWQVNMPATTNSTWMTCGDPCDSALRIWGDTVVECVLNKLCPSHTYVIFKYPE
1192865..1193494                   PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; SR35_05880; phage(gi557307546)     1.10e-61            EscherichiacoliMHRIDTKTAQKDKFGAGKNGFTRGNPQTGTPATDLDDDYFDMLQEELCSVVEASGASLEKGRHDQLLTALRALLLSRKNPFGDIKSDGTVQTALENLGLGEGAKLNAATATLGRTGFIAIPVMIGGIEQSVIIQWGWNAAKASASGGDGNTVVFPVAFNNACVAVVANYDNVSAPINAVATGGYTTTSFLLRCAAQTGSYYYNWIAIGY
1193496..1193909                   PHAGE_Shigel_SfIV_NC_022749: tail fiber assembly protein; SR35_05885; phage(gi557307547)     1.07e-12            EscherichiacoliMKIYCCLNTVGFFMDGCGVIPPDSKEITAEHWQSLLKSQAEGGVIDFSVFPPSIKEVIRTHDDEVADANFQKQMLISDATDFINSRQWQGKAALGRLKEDELKQYNLWLDYLEALELVDTSSAPDIEWPTPPAVQAR
complement(1193881..1194483)       PHAGE_Shigel_SfIV_NC_022749: tail fiber assembly protein; SR35_05890; phage(gi557307548)     7.44e-112           EscherichiacoliMHKAILNSDLIATKAGDVTVYNYDGETREYISTSNEYLAVGVGIPACSCLDAPGTHKAGYAICRSADFNSWEYVPDHRGETVYSTKTGESKEIKAPGDYPENTTTIAPLSPYDKWDGEKWVTDTEAQHSAAVDAAEAQRQSLIDAAMASISLIQLKLQAGRKLTQAETTRLNAVLDYIDAVTATDTSTAPDVIWPELPEA
complement(1194483..1194977)       PHAGE_Escher_pro483_NC_028943: tail fiber protein; SR35_05895; phage(gi971758534)     1.34e-56            EscherichiacoliMGEGSALPVGVPVPWPSATPPTGWLKCNGAAFSAEEYPELAKAYPTNKLPDLRGEFIRGWDDGRGIDTGRSILSIQGYATEDHAHGLPSRSTIVTDATINFYFDEIWVNSGTDIIKRGNTNDAGLPAPDYGTFKTYKQSVDGLGAAASETRPRNIAFNYIVRAA
1195049..1195603                   PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; SR35_05900; phage(gi169936026)         1.14e-116           EscherichiacoliMLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSAGDTLVVWKLDRLGRSMRHLVVLVEELRERGINFRSLTDSIDTSTPMGRFFFHVMGALAEMERELIVERTKAGLETARAQGRIGGRRPKLTPEQWAQAGRLIAAGTPRQKVAIIYDVGVSTLYKRFPAGDK
1195710..1196543                   PHAGE_Mycoba_Lamina13_NC_024143: HNH endonuclease; SR35_05905; phage(gi640884809)     1.73e-05            EscherichiacoliMHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVVVYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNRTKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK
complement(1197044..1197367)       PHAGE_Stx2_c_1717_NC_011357: hypothetical protein; SR35_05910; phage(gi209447168)     1.36e-50            EscherichiacoliMKWIVIDTVIQPTCGISFSAIWGNMKMIIWYQSTIFLPPGSIFTPVKSGIILKDKEYPITIYHIAPFNKDLWSLLKSSQECPPGESKITNKCLHNSCIIKICPYGLK
complement(1197904..1198014)       hypothetical protein; SR35_05915                                                     N/A                 EscherichiacoliMEIKVQRLSLWMINTVFLLSPINNHQTNTINLIFEM
complement(1198067..1198471)       PHAGE_Entero_lambda_NC_001416: putative envelope protein; SR35_05920; phage(gi19263396)     2.17e-34            EscherichiacoliMDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVENNKPLI
1202035..1202048                   attR                                                                                 N/A                 ATTCATCTTATTTT

#### region 3 ####
1581158..1581169                   attL                                                                                 N/A                 TAACGGCAGCAA
1589820..1590566                   PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; SR35_07810; phage(gi971760361)     8.52e-10            EscherichiacoliMIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPVTQSYAGLNVHRQ
1590655..1591341                   GntR family transcriptional regulator; SR35_07815                                    N/A                 EscherichiacoliMTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVRFNVSRQPVREAFIKLAENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARRAASMITESQCYQLEQNLHQQRIAIERKQLDDFFELDDNFHQLLTQIADCQLAWDTIENLKATVDRVRYMSFDHVSPPEMLLRQHLDIFSALQKRDGDAVERAMTQHLQEISESVRQIRQENSDWFSEE
1591518..1591721                   PHAGE_Salmon_SSU5_NC_018843: putative selenium-binding protein YdfZ; SR35_07820; phage(gi410491512)     4.86e-18            EscherichiacoliMTTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRGKTVVVEGCEEKLAPLDLIRLGMN
complement(1591756..1593216)       D-mannonate oxidoreductase; SR35_07825                                               N/A                 EscherichiacoliMGNNLLSAKATLPVYDLNNLAPRIVHLGFGAFHRAHQGVYADILATEHFSDWGYYEVNLIGGEQQIADLQQQDNLYTVAEMSADVWTARVVGVVKKALHVQIDGLETVLAAMCEPQIAIVSLTITEKGYFHSPATGQLMLDHPMVAADVQNPHQPKTATGVIVEALARRKAAGLPAFTVMSCDNMPENGHVMRDVVTSYAQAVDVKLAQWIEDNVTFPSTMVDRIVPAVTEDTLAKIEQLTGVRDPAGVACEPFRQWVIEDNFVAGRPEWEKAGAELVSDVLPYEEMKLRMLNGSHSFLAYLGYLAGYQHINDCMEDEHYRYAAYGLMLQEQAPTLKVQGVDLQDYANRLIARYSNPALRHRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKFDLLALGVAGWMRYVGGVDEQGNPIEISDPLLPVIQKAVQSSAEGKARVQSLLAIKAIFGDDLPDNSLFTARVTETYLSLLAHGAKATVAKYSVK
complement(1593305..1594588)       PHAGE_Burkho_phi1026b_NC_005284: gp59; SR35_07830; phage(gi38707949)                 7.81e-28            EscherichiacoliMDFQLYSLGAALVFHEIFFPESSTAMALILAMGTYGAGYVARIVGAFIFGKMGDRIGRKKVLFITITMMGICTTLIGVLPTYAQIGVFAPILLVTLRIIQGLGAGAEISGAGTMLAEYAPKGKRGIISSFVAMGTNCGTLSATAIWAFMFFILSKEELLAWGWRIPFLASVVVMVFAIWLRMNLKESPVFEKVNDSNQPTAKPAPAGSMFQSKSFWLATGLRFGQAGNSGLIQTFLAGYLVQTLLFNKAIPTDALMISSILGFMTIPFLGWLSDKIGRRIPYIIMNTSAIVLAWPMLSIIVDKSYAPSTIMVALIVIHNCAVLGLFALENITMAEMFGCKNRFTRMAISKEIGGLIASGFGPILAGIFCTMTESWYPIAIMIMAYSVIGLISALKMPEVKDRDLSALEDAAEDQPRVVRAAQPSRSL
1595375..1595608                   PHAGE_Salmon_118970_sal3_NC_031940: base plate hub; SR35_07835; phage(gi100103)      9.57e-06            EscherichiacoliMKSKDTLKWFPAQLPEVRIILGDAVVEVAKQGRPINTRTLLDYIEGNIKKKSWLDNKELLQTAISVLKDNQNLNGKM
1595925..1596515                   PHAGE_Entero_Mu_NC_000929: Gin; SR35_07840; phage(gi9633542)                         2.32e-29            EscherichiacoliMSQIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQAVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI
complement(1596613..1597188)       PROPHAGE_Escher_MG1655: Qin prophage; predicted tail fibre assembly protein; SR35_07845; phage(gi16129505)     6.90e-139           EscherichiacoliMAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEAEKLFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEEISLLEAWKKYRVLLNRVDTSTAQDIEWPALP
complement(1597188..1598150)       PROPHAGE_Escher_MG1655: Qin prophage; predicted side tail fibre assembly protein; SR35_07850; phage(gi16129506)     0.0                 EscherichiacoliMNITALTDNTQGAAGLELYEVYNNGYPTAYGNIIHLKGMTAVGEGELLIGWSGTSGAHAPAFIRSRRDTTDANWSPWAQLYTSAHPPAEFYPVGAPIPWPSDTVPSGYALMQGQTFDKSAYPKLAVAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTETTSSFDYGTKSTNNTGAHTHSISGTANSAGAHQHKSSGAFGGTNTSIFPNGYTAISNLSAGIMSTTSGSGQTRNAGKTSSDGAHTHSLSGTAASAGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA
complement(1598101..1598670)       PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; SR35_07855; phage(gi100035)     8.15e-125           EscherichiacoliMEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYNRADRQYAGGSRS
1599059..1599292                   PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; SR35_07860; phage(gi157166037)     6.55e-27            EscherichiacoliMSTKNRTRRTTTRNIRFPNQMIEQINIALEQKGSGNFSAWVIEACRRRLCSEKRVSSEANKEKSDITELLRKQVRPD
1599350..1599760                   PHAGE_Entero_lambda_NC_001416: putative envelope protein; SR35_07865; phage(gi19263396)     1.04e-75            EscherichiacoliMDQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQKTTQILPR
complement(1599912..1600085)       gns; SR35_07870                                                                      N/A                 EscherichiacoliMNIENLKTKAEADISEYITKKIIELKKKTGKEVTSIQFTAREKMTGLESYDVKINLI
complement(1600257..1600433)       hypothetical protein; SR35_07875                                                     N/A                 EscherichiacoliMTGVNTIMREYPNGEKTHLTVMAAGFPSLTGDHKVIYVAADRHVTSEEILEAAIRLLS
complement(1600758..1600970)       PHAGE_Lactoc_bIL312_NC_002671: Csp; SR35_07880; phage(gi13095918)                    8.40e-20            EscherichiacoliMSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHVVAL
complement(1601333..1601830)       PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; SR35_07885; phage(gi16765210)     1.80e-62            EscherichiacoliMNQIFMVIFLVLSGFIVGNVWSDRGWQKKWAERDAAALSQEVNAQFAARIIEQGRTIARDEAVKDAQQKSAEISARAAYLSDSVNQLRAEAKKYAIRLDAAKHTADLAAAVRGKTTKTAEGMLTNMLGDIAAEAQLYAEIADERYIAGVTCQQIYESLRDKKHQM
complement(1601827..1602360)       PHAGE_Entero_mEp460_NC_019716: endolysin; SR35_07890; phage(gi428782372)             1.35e-121           EscherichiacoliMNTKIRYGLSAAVLALIGAGASAPQILDQFLDEKEGNHTMAYRDGSGIWTICRGATVVDGKTVFPNMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRLNAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQVIRRDQESALTCWGIEQ
complement(1602357..1602668)       PHAGE_Entero_mEp460_NC_019716: hypothetical protein; SR35_07895; phage(gi428782371)     5.21e-40            EscherichiacoliMTQDYELVVKGVRNFENKVTVTVALQDKERFDGEIFDLDVAMDRVEGAALEFYEAAARRSVRQVFLEVAEKLSEKVESYLQHQYSFKIENPANKHERPHHKYL
complement(1602673..1602888)       PHAGE_Entero_mEp460_NC_019716: porin; SR35_07900; phage(gi428782370)                 1.63e-42            EscherichiacoliMKSMDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDRRKAARGE
complement(1603642..1603857)       PHAGE_Lactoc_bIL312_NC_002671: Csp; SR35_07905; phage(gi13095918)                    4.11e-20            EscherichiacoliMSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANVIITD
1604158..1604370                   cold-shock protein; SR35_07910                                                       N/A                 EscherichiacoliMSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEEITTGLRVEFCRINGLRGPSAANVYLS
complement(1604792..1605544)       PHAGE_Entero_mEp460_NC_019716: late gene regulator; SR35_07915; phage(gi428782366)     3.20e-177           EscherichiacoliMNLEALPKYYSPKSPKLSDDAPATGTGCLTITDVMAAQGMVQSKAPLGLALFLAKVGVQDPQFAIEGLLNYAMALDNPTLNKLSEEIRLQIIPYLVSFAFADYSRSAASKARCEHCSGTGFYNVLREVVKHYRRGESVIKEEWVKELCQHCHGKGEASTACRGCKGKGIVLDEKRTRFHGVPVYKICGRCNGNRFSRLPTTLARRHVQKLVPDLTDYQWYKGYADVIGKLVTKCWQEEAYAEAQLRKVTR
complement(1605558..1606607)       PHAGE_Entero_mEp460_NC_019716: hypothetical protein; SR35_07920; phage(gi428782365)     2.80e-140           EscherichiacoliMRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAEDKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALPEAVSRRSLGLPAEKICSVYRESDIVPGEQTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA
complement(1606609..1606887)       PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; SR35_07925; phage(gi401817580)     1.42e-15            EscherichiacoliMARNAKYYNSDNSPVLACTHGRYSHAFKSEWFQHPPCTAEQAEWLIHSYRRRGFEVKKALSLDYRHWIISVRLPYSERPPRASRTFQQRIWR
complement(1606954..1607205)       hypothetical protein; SR35_07930                                                     N/A                 EscherichiacoliMMNIEELRKIFCEDGLYAVCVENGNLVSHYRIMCLRKNGAALINFVDARVTDGFILREGEFVTSLQALKEIGIKAGFSAFSGE
complement(1607422..1607577)       PHAGE_Entero_933W_NC_000924: host killer protein; SR35_07935; phage(gi9632541)       1.17e-25            EscherichiacoliMKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE
complement(1607649..1607936)       RelE toxin; SR35_07940                                                               N/A                 EscherichiacoliMAYFLDFDERALKEWRKLGSTVREQLKKKLVEVLESPRIEANKLRGMPDCYKIKLRSSGYRLVYQVIDEKVVVFVISVGKRERSEVYSEAVKRIL
complement(1607936..1608175)       bifunctional antitoxin/transcriptional repressor RelB; SR35_07945                    N/A                 EscherichiacoliMGSINLRIDDELKARSYAALEKMGVTPSEALRLMLEYIADNERLPFKQTLLSDEDAELVEIVKERLRNPKPVRVTLDEL
1608708..1609040                   protein flxA; SR35_07950                                                             N/A                 EscherichiacoliMSVTIQGNTSTVISNNSAPEGTSEIAKITRQIQVLTEKLGKISSEEGMTTQQKKEMAALVQKQIESLWAQLEQLLRQQAEKKNEDATVQPDKKEEKKDDTNTAGTIDIYV
complement(1609923..1610153)       PHAGE_Pectob_ZF40_NC_019522: putative cro anti-repressor; SR35_07960; phage(gi422936651)     9.10e-12            EscherichiacoliMLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDEYRKTKRAGRLNNENHS
1610237..1610644                   PHAGE_Cronob_phiES15_NC_018454: putative transcriptional repressor DicA; SR35_07965; phage(gi401817574)     8.91e-41            EscherichiacoliMETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELLKARQRTNKR
1610811..1610966                   PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; SR35_07970; phage(gi472340166)     5.92e-12            EscherichiacoliMDTIDLGNNESLVYGVFPNQDGTFTAMTYTKSKTFKTENGARRWLERNSGE
1611126..1611344                   hypothetical protein; SR35_07975                                                     N/A                 EscherichiacoliMQKREPVIIAPDYTDDELYEWMRQKINAAQDLKWANEARAKQAENLSALEQDITNLEKAAALSIARMITYPR
complement(1611348..1611641)       hypothetical protein; SR35_07980                                                     N/A                 EscherichiacoliMVNLTTRCPQRGRNNPAILTAAPFRGLPQPEAHGRRKFNDRLSMNQLPRHALSRYGLTFQGNILSVNCQFRMRTRVRRTHSTSPVENSLITNLSFVD
1611912..1612100                   cell division inhibition protein DicB; SR35_07985                                    N/A                 EscherichiacoliMKTLLPNVNTSEGCFEIGVTISNPVFTEDAINKRKQERELLNKICIVSMLARLRLMPKGCAQ
1612097..1612288                   hypothetical protein; SR35_07990                                                     N/A                 EscherichiacoliMNSAFVLVLTVFLVSGEPVDIAVSVHRTMQECMTAATEQKIPGNCYPVDKVIHQDNIEIPAGL
complement(1612600..1612911)       hypothetical protein; SR35_07995                                                     N/A                 EscherichiacoliMLNPPNGVQLKLRIHGVNFWHFHQRFNDMSVECCHVFLQQFLCANNHINGDVFTCVELNHDSVLYFRGQLVKSDVHRIGFSLNRDKRSRLLIPAVFLHIFSIP
1613695..1613706                   attR                                                                                 N/A                 TAACGGCAGCAA
1613815..1615011                   PHAGE_Entero_YYZ_2008_NC_011356: putative integrase; SR35_08005; phage(gi209427727)     2.46e-174           EscherichiacoliMITDVWKYRGKSTGELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHLREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNEAMKN

#### region 4 ####
2428938..2429870                   PHAGE_Entero_VT2phi_272_NC_028656: hypothetical protein; SR35_12005; phage(gi966197797)     0.0                 EscherichiacoliMDNDKIDQHSDEIEVESEEKERGKKIEIDEDRLPSRAMAIHEHIRQDGEKELERDAMALLWSAIAAGLSMGASLLAKGIFQVELEGVPGSFLLENLGYTFGFIIVIMARQQLFTENTVTAVLPVMQKPTMSNVGLLIRLWGVVLLGNILGTGIAAWAFEYMPIFNEETRDAFVKIGMDVMKNTPSEMFANAIISGWLIATMVWMFPAAGAAKIVVIILMTWLIALGDTTHIVVGSVEILYLVFNGTLHWSDFIWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRKAEARQKAERAENIKKNYKNPA
2429946..2430020                   tRNA                                                                                 N/A                 GTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCA
2429991..2430006                   attL                                                                                 N/A                 TTGCAGGTTCGATTCC
2430182..2431339                   PROPHAGE_Escher_MG1655: CPS-53 (KpLE1) prophage; predicted prophage CPS-53 integrase; SR35_12015; phage(gi16130281)     0.0                 EscherichiacoliMLTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQEARDKAWTARKDISVGIDPVKAKKASSNNNSFSAIYKEWYEHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWWADWLDEKVE
2431492..2431854                   PHAGE_Shigel_SfIV_NC_022749: putative flippase; SR35_12020; phage(gi557307553)       8.47e-74            EscherichiacoliMLKLFAKYTSIGVLNTLIHWVVFGVCIYVAHTNQALANFAGFVVAVSFSFFANAKFTFKASTTTMRYMLYVGFMGTLSATVGWAADRCALPPMITLVTFSAISLVCGFVYSKFIVFRDAK
2431851..2432771                   PHAGE_Shigel_SfIV_NC_022749: bactoprenol glucosyltransferase; SR35_12025; phage(gi557307552)     0.0                 EscherichiacoliMKISLVVPVFNEEEAIPIFYKTVREFEELKSYEVEIVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHATGDAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRDVVENIKLMPERNLFMKGILSWVGGKTDIVEYVRAERIAGDTKFNGWKLWNLALEGITSFSTFPLRIWTYIGLVVASVAFIYGAWMILDTIIFGNAVRGYPSLLVSILFLGGIQMIGIGVLGEYIGRTYIETKKRPKYIIKRVKK
2432768..2434099                   PHAGE_Shigel_SfIV_NC_022749: serotype specific glucosyltransferase; SR35_12030; phage(gi557307551)     2.45e-92            EscherichiacoliMNKAIKVSLYISFVLIICALSKNIMMLNTSDFGRAIKPLIEDIPAFTYDLPLLYKLKGHIDSIDSYEYISSYSYILYTYVLFISIFTEYLDARVLSLFLKVIYIYSLYAIFTSYIKTERYVTLFTFFILAFLMCSSSTLSMFASFYQEQIVIIFLPFLVYSLTCKNNKSMLLLFFSLLIISTAKNQFILTPLIVYSYYIFFDRHKLIIKSVICVVCLLASIFAISYSKGVVELNKYHATYFGSYLYMKNNGYKMPSYVDDKCVGLDAWGNKFDISFGATPTEVGTECFESHKDETFSNALFLLVSKPSTIFKLPFDDGVMSQYKENYFHVYKKLHVIYGESNILTTITNIKDNIFKNIRFISLLLFFIASIFIRNNKIKASLFVVSLFGISQFYVSFFGEGYRDLSKHLFGMYFSFDLCLYITVVFLIYKIIQRNQDNSDVKH
2434398..2434742                   PHAGE_Shigel_SfIV_NC_022749: tail fiber assembly protein; SR35_12035; phage(gi557307548)     3.99e-57            EscherichiacoliMILDRHITSRGYVCMRPATIAPLTPYDKWDGEKWVTDTEAQHSVAVDAAEAQRQSLIDTAMASISLIQLKLQAGRKLMQAETSRLNTVLDYIDAVTATDTSTAPDVIWPELPEE
complement(2434714..2435154)       PHAGE_Shigel_SfIV_NC_022749: tail fiber assembly protein; SR35_12040; phage(gi557307547)     9.55e-20            EscherichiacoliMNYIYSATTNSFYPLEMKEDYTQAGSWPDDAVEVDEQVYIEFSGLPPKGKIRIAGENGFPAWSEIPPPTHEEQIAAAELKKQQLINQANDYMNSKQWAGKAAIGRLKGEELAQYNLWLDYLDALELVDTSSAPDIEWPTPPAVQAR
complement(2435181..2435783)       PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; SR35_12045; phage(gi557307546)     8.52e-59            EscherichiacoliMLPLVIPRTRGNPQTGTPATDLDDDYFDMLQEELCSVVEASGASLEKGRHDQLLTALRALLLSRKNPFGDIKLDGTVQKALENLGLGEAAKRNVGTGANQIPDMGSFMLSASVPGYQKLPSGLIIQWGPIDVPLTSQDTVTYFPIAFPNRCLRVFATQDYTPGSANVGYIACAGYNQDPVKFISRAGVPGIGASFFALGC
complement(2435749..2436024)       PHAGE_Entero_SfV_NC_003444: DNA adenine methylase; SR35_12050; phage(gi19549028)     3.82e-61            EscherichiacoliMSNKYCQALVELRNKPAHELKEVGDQWRTPDNIFWGINTLFGPFVLDLFTDGDNAKCAAYYTAEDNALAHDWSERLAELKGAAFGNPPYPW
complement(2436024..2436512)       PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; SR35_12055; phage(gi557307568)     1.33e-110           EscherichiacoliMSLLNDVQKFIEAHPGCTSGDIADAFAGYSRQRVLQSASKLRQSGRVAHRCEGDTHRHFPRLTERAQDPEPQPVRETRPVRNFYVGTNDPRVILCLTRQAEELESRGLYRRAATVWMAAFRESHSQPERNNFLARRERCLRKSSKRAASGEEWYLSGNYVGA
complement(2436515..2436883)       PHAGE_Shigel_SfIV_NC_022749: replication protein; SR35_12060; phage(gi557307567)     1.14e-87            EscherichiacoliMTCAQWLWKKIIALYEQAAECDGEVVRPKEPNWTAWANEIRLMCVQDGRTHKQICEMYSRVSRDPFWCRNVLSPSKLREKWDELSLRLSPSVSTYTEKREDPYFKASYDNVDYSQIPAGFRG
2437241..2437603                   PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; SR35_12065; phage(gi557307560)     2.85e-80            EscherichiacoliMASERSTDVQAFIGELDGGVFETKIGAVLSEVASGVMNTKTKGKVSLNLEIEPFDENRLKIKHKLSYVRPTNRGKISEEDTTETPMYVNRGGRLTILQEDQGQLLTLAGEPDGKLRAAGH
2437669..2438493                   PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; SR35_12070; phage(gi557307559)     0.0                 EscherichiacoliMSQNLDATAINQIHALISAQGVNEIISKIGADAVALPENFRIHDLEKFNLNRFRFRGALSTASIDDFTRYSKDLADEGTRCFIDADNMRAVSVLNLGTIDEPGHADNTATLKLKKTAPFSALLSVNGERNSQKSLAEWIEDWADYLVGFDANGDAIQATKAAAAIRKITIEANQTADFEDNDFSGKRSLMESVEAKTKDIMPVAFEFKCVPFEGLKERPFKLRLSIITGDRPVLVLRIIQLEAVQEDMANEFRDLLVEKFKDSKVETFIGTFTA
2438621..2439157                   PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; SR35_12075; phage(gi557307558)     4.07e-129           EscherichiacoliMSFIKTFSGKHFYYDKINKDDIVINDIAVSLSNICRFAGHLSHFYSVAQHAVLCSQLVPQEFAFEALMHDATEAYCQDIPAPLKRLLPDYKRMEEKIDAVIREKYGLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPVLEGIPATEMFNVIPLAPGHAYGMFMERFNDLSELRKCA
2439148..2439510                   PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; SR35_12080; phage(gi557307557)     3.75e-82            EscherichiacoliMRMNVFEMEGFLRGKCVPRDLKVNETNAEYLVRKFDALEAKCAALENKIIPVSAELPPANESVLLFDANGEGWLIGWRSLWYTWGQKETGEWQWTFQVGDLENVNITHWAVMPKAPEAGA
2439510..2439815                   PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; SR35_12085; phage(gi557307556)     3.98e-67            EscherichiacoliMTTFTNKELIKEIKERISSLEVRDDIERRAYEIALVSLEVEPDEREAYELFMEKRFGDLVDRRRAKNGDNEYMAWDMTLGWIIWQQRAGIHFSTMSQQEVK
2439912..2439927                   attR                                                                                 N/A                 TTGCAGGTTCGATTCC
2439947..2440147                   PHAGE_Entero_HK633_NC_019719: hypothetical protein; SR35_12090; phage(gi428782548)     5.50e-44            EscherichiacoliMQHELQPDSLVDLKFIMADTGFGKTFIYDRIKSGDLPKAKVIHGRARWLYRDHCEFKNKLLSRANG
complement(2440331..2441266)       PHAGE_Burkho_phi1026b_NC_005284: gp58; SR35_12095; phage(gi38707948)                 4.74e-16            EscherichiacoliMEPLREIRNRLLNGWQLSKMHTFEVAARHQSFALAAEELSLSPSAVSHRINQLEEELGIQLFVRSHRKVELTHEGKRVYWALKSSLDTLNQEILDIKNQELSGTLTLYSRPSIAQCWLVPALGDFTRRYPSISLTVLTGNDNVNLQRAGIDLAIYFDDAPSAQLTHHFLMDEEILPVCSPEYAQRHALTNTVINLCHCTLLHDRQAWSNDSGTDEWHSWAQHYAVNLPTSSGIGFDRSDLAVIAAMNHIGVAMGRKRLVQKRLASGELVAPFGDMTVKCHQHYYITTLPGRQWPKIEAFIIWLREQVKTTS

#### region 5 ####
3671001..3671013                   attL                                                                                 N/A                 AGGTTTAATTCCC
3673274..3673933                   PHAGE_Bacill_G_NC_023719: gp249; SR35_18165; phage(gi593777705)                      1.87e-09            EscherichiacoliMKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL
3674037..3675011                   bifunctional glyoxylate/hydroxypyruvate reductase B; SR35_18170                      N/A                 EscherichiacoliMKPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTVEQNAAIFAEAEGLLGSNENVNAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQGKVEKNCVNPHVAD
complement(3675061..3675771)       hypothetical protein; SR35_18175                                                     N/A                 EscherichiacoliMATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVLAQQLQNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTATQ
3676205..3676495                   PHAGE_Burkho_BcepC6B_NC_005887: putative prophage repressor protein; SR35_18180; phage(gi48697234)     9.74e-06            EscherichiacoliMEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME
3676776..3676988                   PHAGE_Lactoc_bIL312_NC_002671: Csp; SR35_18185; phage(gi13095918)                    3.01e-24            EscherichiacoliMSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNVTSL
complement(3677175..3677327)       PHAGE_Escher_P13374_NC_018846: prophage host toxic membrane protein; SR35_18190; phage(gi410491667)     1.57e-05            EscherichiacoliMPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE
3677407..3677928                   PROPHAGE_Escher_MG1655: IS150 transposase A; SR35_18195; phage(gi16131428)           2.32e-124           EscherichiacoliMSKPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVALYEKHGEKGLIPKPKGVSADPELRIKVVKAVIEQHMSLNQAAAHFMLAGSGSVARWLKVYEERGEAGLRALKIGTKRNIAISVDPEKAASALELSKDRRIEDLERQVRFLETRLMYLKKLKALAHPTKK
3677562..3677574                   attR                                                                                 N/A                 AGGTTTAATTCCC
3677925..3678776                   PROPHAGE_Escher_MG1655: IS150 transposase B; SR35_18200; phage(gi16131429)           0.0                 EscherichiacoliMKVLNELRQFYPLDELLRAAEIPRSTFYYHLKALSKPDKYADVKKRISEIYHENRGRYGYRRVTLSLHREGKQINHKAVQRLMGTLSLKAAIKVKRYRSYRGEVGQTAPNVLQRDFKATRPNEKWVTDVTEFAVNGRKLYLSPVIDLFNNEVISYSLSERPVMNMVENMLDQAFKKLNPHEHPVLHSDQGWQYRMRRYQNILKEHGIKQSMSRKGNCLDNAVVECFFGTLKSECFYLDEFSNISELKDAVTEYIEYYNSRRISLKLKGLTPIEYRNQTYMPRV
