gi|00000000|ref|NC_000000|  Staphylococcus haemolyticus strain Sh29/312/L2, complete genome. [asmbl_id: NC_000000].2561368, gc%: 32.72%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
1552815..1552826                   attL                                                                                 N/A                 TAAAATTAATTT
1552840..1552851                   attL                                                                                 N/A                 ATTTATCACAAT
complement(1560242..1560484)       PHAGE_Lactob_LBR48_NC_027990: hypothetical protein; ShL2_01470; phage(gi937456714)     2.65e-06            MNKLIEYKLENLLKNYKRQYVSVGIKDLATLTGLSKSTLQNKIVCKPEIVEVTRRMGFRVIYLYPEVLDAYQKVINRIGI
complement(1560868..1560999)       hypothetical protein; ShL2_01471                                                     N/A                 MKENEALKAEKALSQMRNETRSMLSESGVENFDDQIVDIIGKP
complement(1561160..1561378)       PHAGE_Staphy_StB27_NC_019914: scaffold protein; ShL2_01472; phage(gi431809709)       2.28e-06            MENNQSNITEEAKSNENLETPNEQIQQNEKTFSQEEVSQMIKDHLARERRKSDEVWDINNIIMLSSKFTVAD
complement(1561539..1561733)       hypothetical protein; ShL2_01473                                                     N/A                 MRIARSYGHKVNVVLNDDNKLFGDVINFENPYESDSANFVMDLETELGIYSIDDSEIKEIRIIS
complement(1561730..1562938)       PHAGE_Staphy_StB27_NC_019914: minor head protein; ShL2_01474; phage(gi431809708)     2.41e-82            MKNMQRILGLTIQEVVKKADDFDVYVFRNKAKKYVKRIDFSDEANKALKLYNLTMKVSREKLLKQQLDLMVKDSTLDIQDKLENKLVEAVDREVERQAHILGEHVKIDDNEVKAVVNSNFKGVNWSTRLWQDMALVQKEVETTTNNVLLRGRHPNEYVSEFKKQTNSTTYNASRLLVTESARVQAESQKLTYLKELGKDGEYKYVAKIDKKTSKICHSLNGNVFKFKDMIPGVNALPQKYYSTTCGKTGGINSLMSVKVSIRQRIKVIEKEKLQEQAKKEMLDMIHSGKIRIDINPEKQNRHCKNHRLFEESKSKAIKNNYMLPSYTTIPNRELNKLLMEKSNTGIMLLVNNKFNKKEIIDFGVVIGKAFVNGRYINTKLGKVHYSKTGTHVVPYIKKEMKK
complement(1563554..1563766)       PHAGE_Staphy_StauST398_3_NC_021332: hypothetical protein; ShL2_01475; phage(gi509141007)     2.93e-10            MNQFNHIYTVIEKLLNNNEISNYKIKKDTGISYGGISELRNGKRKVKNLTLETAEKLYNYQVELEQSDEK
complement(1563939..1564046)       hypothetical protein; ShL2_01476                                                     N/A                 MKRSEKEKERIEKIKYRLAIAGLIIQILNFIKSFI
complement(1564150..1564470)       PHAGE_Staphy_80_NC_030652: prohead core protein protease; ShL2_01477; phage(gi100061)     1.50e-09            MTYLEGRYTDITSKHVVSGKNSLDKFTPDFVAKDIENKEFLFKFLNKNNTTIHNARSYILYSIMNETNLILILEDDMVEEEKLLKEFINKFEAKVQLKNEQDLIKN
complement(1564888..1565661)       PHAGE_Staphy_52A_NC_007062: ORF013; ShL2_01479; phage(gi66396280)                    2.04e-58            MEIISEITEDVGNGVTDPIRGYIDDKKVVAKYIHNNEGFIALFNELLGYNLAEFFGIRHPHFGYALFSKEDTAVKNGKDYVHSSLFTYTTWLEKSLTITSPSMTSFVQKSEIVNLLLFDIFIYNKDRNLGNLLIEIPKKLYPIDYTHILPGGCIWPDVLKNDDYSIEDIIKDMFSSGYYQYLLENRKIETSIIEDCGRNFVDKVNDVDIESIISKIPIYLKNNLSEENIQLLHKYFIYISENFDEAIKYIIEKIGKE
complement(1565843..1566760)       PHAGE_Staphy_IME_SA4_NC_029025: hypothetical protein; ShL2_01480; phage(gi971766708)     1.91e-74            MAKEFLENWNGVPVYLDLIPYGTRRTGQKLDTGSPIFAVYHDTGNPGSTAQQNVNYYKNTYMEPWASTASAHFFVDDKECIINVPIDEKAWHVLYDTPTDNYYFGDDANDAAFGGELCYFPDDRERSLTALDNFARVCAVLFESWDIDHFHKCPGHQDIQDDKQDPGNALEACGYGRHEIDVIDNLVQKYMDGTDVDKDTITDLPEKDDVIEKKPVGCTRVKVWSEEPYYRGTIKYDASLRERAGSSFDNYSFASEKDVLEAGSTVYIYEEIQDPQGNIWCRTYSPSNNGWVHKHTIEVEETYKK
complement(1566807..1567199)       PHAGE_Staphy_SAP_2_NC_009875: holin; ShL2_01481; phage(gi157738598)                  2.99e-25            MAEMADKYNIEVDDFMSLIYSGNKVFVYILLLLIFVDVVTGMITAFSEGKLMSKKAMLGYVKKIAFLCVIIVSNTLDIIFQLHGLLVNATVMFFIIGEATSIVENSVKLGVPIPEQLKNRLNITEETNKN
complement(1567252..1568529)       PHAGE_Lactob_phig1e_NC_004305: minor capsid protein; ShL2_01482; phage(gi23455814)     5.38e-20            MANQDLFFDITKQGTEQEKQQYIISRVGDGGLKAITITVYSNGRPYNITDLTPVFEGVKPDGERIIDTTGGLVLDPRNGVFRYILPQQASTAEGDYQQAFFKLKRGEQTDSSLEVRIRVLKNKVEFGINSESYFTEYQKELERLRTTVNTGIEELKHTAEATEVKINSEVETAKALDTQLKALQSAINSNQLATREDLTSQIKPLSDQVVAFTNSLETTKDTVNANVQKLVDTKMDAGVAPGVLSNPANITKSGNYYYNSSTQGLPTLNGSNANGIIQAVMRDENNGMLSILGTGLTREKYKGKLYDRWKSSTPILLWSGRASSDDTVQLKDDVHNYGQLIINVTFTSNRHATHFVTVPNNGETLYLNNIGLRSSGNGYKNGYLDELSILFKDNNRIQVVKSLLATDGEQAINSDTAITAIYGIY
complement(1568547..1569575)       PHAGE_Staphy_SA97_NC_029010: endopeptidase tail protein; ShL2_01483; phage(gi971765363)     1.93e-90            MGLITTNLSNQAGAEFRRQLIENFKEIEDFMGDYKTGEAEKKISSLVKKYEDELFKEVRAIVMPEESPLEVTKEVVDSKTDLKGVKHGSLSERIRIDLEQLKKDQVENNPLHNTVVTKNGTIVYDYSKKSQALSDIKNIYCIGDSVARGLHASKNFGQFLAEKLNANLNNLAVSGATFSKASDNSIFDQALKVKDADLVIVQGTDDDWLKNDGIELGIDKTDIRTFLGAFYQIIKVIRAQNKDAKIVCMTATRQLPVNGTYIRRKDTDRNRLNLSLEDYVNAQVLACTELDVPVFDAYHTDIINPYNPGFRKKCMVDGLHPNELIHEVISYELLKNYYYFYG
complement(1569586..1570167)       PHAGE_Staphy_187_NC_007047: ORF019; ShL2_01484; phage(gi66395234)                    1.64e-50            MPITSIRTLTVNNEEVYARTHIQGVDGLANSTENKDGLMSKEDKQKLNRLQEFDISKLNEATKISPGLMSMEDKQKLDNIDKHNQIINRNVNVYPNKTQIVNLNKNLTSCLNGIILVWRLDDIDDLYHYQYVPKYHNNHPNTYITEVIPYRNQGNKLDYCIKLVRVSNTQVVGAASNQLAPSNHVRLHEILEY
complement(1570148..1570366)       PHAGE_Staphy_187_NC_007047: ORF004; ShL2_01485; phage(gi66395219)                    1.52e-08            MTEIRPLYFEDEHIYPQTHVQAIVGLNNATTEKNGLLSKEDKQKLDKLNVTDSNKLGSVFYKEVTLSADNEH
complement(1570363..1571523)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: hypothetical protein; ShL2_01486; phage(gi557308071)     2.50e-101           MDRHKHLSIMNFEQTICENLIEIDYSSFKDTYELNNARMITFTAYRTNANRFVFDLLVNENFVIYKGEKFIIKNAVSKVEGYKVSMDITAYHVMFEFQNHFVEQLDDDSSDKKKKEYTLSQYLEYGFKNQKTNVKYTYKLFGDFSKKIMVDNIGGKNGIEFIKEAIDLFKCIIYPIDTEIGFYTPENFYKRSEEIIRYKYNTDNVVATISTVELRTAVKAYGKRRDNDKKKKYEAMIEYVSPQAKIYGKRYASPINNDDITSETELKKWAESQLQDKPKTELTVNYISYKHLSPRDTVFFIHELMNYNTELKIIKLERGHPFVQTIDILTFSNELEDMVKIQQSLNKKLKAQDNKFDYKLNEFNRSVSKNMKELIHVGEAVGSVLE
complement(1571534..1572361)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: tail tape measure protein; ShL2_01487; phage(gi557308070)     1.53e-120           MSETWVKIIEDGIEYDIDEFAGLMFLDAKASYPSENENNVSINGIDGVLPGAISFAPFNLVLRFGYDGIDAREIDLFEHHFRSIFHRRKPYAIVTSQMPGIKYSISGASIQPTVKDFCSLELEVTLKVYKGYSESVNTTGKDFVFNSEWMLENGLPLNHKPKYHFKTRSFQVWNGSTDTVDPRMRHKLKILMQINAVGGFQLVNTTTEDKFKYNKTIEYRSKFMLNDVYAYKDNQRVGIDTNRGIITLAPGMNNFEILGDVKDVDIVFEFPFIYR
complement(1572361..1577115)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: tail length tape measure protein; ShL2_01488; phage(gi557308069)     0.0                 MPGVISASEASGAELATTAQVMASSINAFGLKASDATHVADLLATAANDSAADINYMGDALKYAGTPAKALGVTLEDTSAAIEVMSNSGLDGSQAGTALRASFIKLASPSKEASTLMQQLGVHLMDAKGHFVGMPQLIAQFQNGLKGMSKEQKLATISTVVGSEAASGFLSLIDAGPSKIDKYSNALKNSDGASKKASDQMKNNLKGSVEQLKGAFESLGIKIGNDLAPAIRKGADWLSNFVDKFSSMPGFARKGVIALGLFAGAIGPIILAGGILAGVISKAVKGYRDLNKTMAINSAEAAINAKAIDVASNSIGKTGKVAKNSKGHMNELGDAVGNLSTGFGGLGKKVPGVGGKFGKFGSLLGGLVSRFGSLGNVSKFAVGAIGKLTIPLTIITTVFTIAYQKLGWFKQGIHDLGRLWNETVGNLDFSWISKFTKGIGTAWDKTKEFSAKLLELTPMFKMLKVSFDGIHKGVAKATDKVDVFGKGVSKETKSALGSFVNYSEKSSKILDKMRINHGEITQKESQELTNLNKKMSDDLIEQMNKRKDKELKIAHDVLDKSTAISEEDKKRILKKTEEKNDIAINKTQELNRKIKEIEDKRNNGGKLTDKEVKDLESLYKQRQEIAVKALSNGEKEQKRILTRMSINRKAVSVEDASETVKEANKARDDAKKDAKKRYDDKIDEINSMVGLSQKEREKLLKEAKDKYDNEKQLADKNHDKVIKNLKGSNKDIEKEIDLSNGNVYTGFQKFWKNVKGGQFDFSKYIKGKWKDFTGYLGGKVDELKDLGKKIGKPFKDGYEIIKNKTKDIRENVKNWFGKTKESAEEKLTGLKTSAEKKWDKISSIAWSNAQTVWKGTSKWFGKAKESVTGKLTDMKDFASGKWDAISSIAWSNAKSVWSGTSKWFGNAFSSLKGWVGDMYESAFDKFDSISSTAWSNAKSVYNGFKTWLSNTLDWIKEIGGEMADAAADLGKSVANKAIGGLNSMIGGINSISKAITDKDLIKPIPTLSTGTMASPSVSTDSNGGLTAPTLAIVNDRGVGNAPGGDVQEIIHRANGTLEAPQGRNVLVSLGVGDSVINANDTQRYQRMGVIPSFSTGTKKKDWLENMVSSIGKFGSKAKDTFHNIKTGAKEMIKAAGDKIKDGASWLSEKVGDVWDYIENPGKLVSKVMDSLGISFGEGNHATIKMAKGAFNILKTKLIDKVKSWFEEFGGGDGSYLFNYPIWQRFGSYTGGLGFNGGRHYGMDFGMPAGTKVYAVKGGTVDNVWYDYGGGNSIQIKTGPGEWNWYMHLSKQLVRLGEHIRTGQLIAESGATGAFCKGAHLHFQLMRGDHPGNDTAIDPESYLKSLKGAAGGNGADAARSAILKAQAILGGDYRSSYITEQMMRVAKRESNYTSNAVNDWDINAQMGDPSKGMFQMIGSTFRTYAKSGFGNIMNPVDEAISAMRYIVDKYGWNGFKRAGDYAYENGGLITKHQIAEIGEGNKPEMIIPLTKRSRAIKLIEDAMRIVGMDTSSSNVTVNQDNSTVEKLLNHIAILTDTGNKLTRMLIETVKPNQQNNSLNNVEQTLSKISATRALALNYMEGGLDI
complement(1577103..1578308)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: tail length tape measure protein; ShL2_01489; phage(gi557308069)     3.07e-156           MDEKLQGLTLEMSLDAIGVQEGMKGLKRQLGVVNSEMKANLSAFDNSEKSMEKYEATLKGLNEKLKVQNQMFVQSKNDLSRLNADYQNAVSRVKDVERAYEKLVETNKKNKLAYDQSTNAMKESNAELKKSEAQFARTIKRKDEAWQKLKQLRQAEKDLKESNEATTAQLNRANNAIQKQVEKHKELVAKYKEEESQVKKLRQENRELLSSHEKITKNYQSSNKELKETGEEFKQLNTTIKNHNKLLASAERNVNNELSALNKLERQVNKTKSEMNDFNREQVIANSSFTKVAEHADKISNKFGVISDKMKSTGKTMSVGITAPVVAGFGAAIKTSADFEAQMSKVGAIAQASSSDLKAMTNEAVDLGAKTSKSASEVAKGMQELASLGFDAKQTMELCQV
complement(1578326..1578499)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: hypothetical protein; ShL2_01490; phage(gi557308068)     8.51e-09            MEKYGWTIIEVKQQPYFEVLDLLALNKEDEASQQQKEQKLSTDKVYTGKDLKLLFGG
complement(1578550..1578891)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; ShL2_01491; phage(gi509139925)     4.28e-44            MIRFEIKNQETGKTESYKKDFITLGEAEKCYTYLEAVEKEREKEKPDASKVRVKERQLLVDLFKEQGLTEETILNNMSTKTYTKAIQDIFREVNGDDEEDTEIETEEAGKTGK
complement(1578935..1579165)       PHAGE_Staphy_phiIPLA_C1C_NC_028962: tail protein; ShL2_01492; phage(gi971761280)     1.72e-12            MVTKLKVYDKKDNVVGEAELNEDGTSKVTINNLEPNTVYPEGTFRVAHVKNEKVSDYVDVPEFKTKPTTTNKDEAQ
complement(1579181..1579936)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: tail protein; ShL2_01493; phage(gi557308065)     9.81e-106           MGSYVAGFKRIYVGVFDNKAEKVTELYTWEDDKGGTVRMNITGLAPDKVDMFASNKRVWIKKQGTNEIKSDLEVFNVPSDELNTVIGRKKDANGTAWVGEDTRAPYVTVVGESQDGITGEPIYCSLMKGVFSLDNLEFKTKGEKAEAPEVTKLVGDWMNRKIEVDGNVTGVAYGYHEGKQGADKFLQKVFVGYTKPILATDKHSESEFNGNTDRGIIDESHPTEAHEVSNLTHSDSNPSETHEATTSVNLQ
complement(1579976..1580371)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: hypothetical protein; ShL2_01494; phage(gi557308064)     3.38e-52            MNILNIIRTLILEDEFLKSELDNRVYFYETSKNADITNSFVILTPIYDEPKTTVSDNYLSEEYLIQVDVETYHHQKTIDITKRIRRLMWENDLLPASSKLDMYFKETKRYVMSRRYQGVPKNQYYKEKHID
complement(1580368..1580775)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: hypothetical protein; ShL2_01495; phage(gi557308063)     4.50e-46            MSVEVKGMEEVLSQLEKRFSPKELIQIEDEALNKGSEVLLKALKSNFESFKATGNTIKEMSVTKPYSKNISVLRAKSIKWKGPTGRYRIIHLNEHGYTRNGKKYTPRGFGVIAKTLKEVESEYRNVVIKELKKKL
complement(1580772..1581104)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: hypothetical protein; ShL2_01496; phage(gi557308062)     1.98e-38            MEFNEFKNHLTFFKYVNNGPYPDENEEETLYSCFCKIYSPVIKDMEILKSNETKITLNIVIRDASEFYIVKSTHMIKIDKAIYRDKLFAIKEIRVNQPREHYITLLVSEV
complement(1581114..1581392)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: putative DNA packaging protein; ShL2_01497; phage(gi557308061)     8.61e-38            MNLEDLKKWLRVDYNFEDSVITDLIESAKAELLLSGVPEYTESDKEYSLFMTAIKYIVTRDFETRGFITEIYKSKAFNEKTLQSMILKLKKW
complement(1581463..1582617)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: major head protein; ShL2_01498; phage(gi557308060)     0.0                 MPTLFELKQSLGMIGQQLSNKNEELSKQASNPNVDIKDIEQLKREKEGLQQRYEIVEQQVKEIEQKEKAKLNDKTSAYQKLNGDEKLIKAKAEFYRHALKPDEFKALSHEAKKALIALPDGNESGGDKFLPTLLSNEIVSEPFAKNKLREKARLTNIKGLELPRIAYTLDDDNFITDEDVAKEIKLKGDTVKFGSNKFKVLASVSDSIIHGSDVDLVNYIENALQSGLAAKERKDAFSIVSTSESQHMSFYIGDKVKSVNGKTTYEAITEALADLHEDFRENASIYMRYAEYVDIITTLANGSTTLFEATPEKVFGKPVIFTDAATHPVVGDFNYFGINYNGITFDTDKDVKHGEYLFVLTAWYDQQRILDSAFRIAKVDNTPL
complement(1582630..1583274)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: putative scaffold protein; ShL2_01499; phage(gi557308059)     3.93e-97            MSEEWFANEVTAPGFKQQLDELGNVSEIDVHINSSGGNVFEGHAIYNMLKMHKAKINIYIDALAASIASVIAMSGDTIFMHKNSFLMIHNSWIVTVGNAKELRDTADLLDKTDEASNQAYLDRALNISEEELKELLDAETWLTASEALEKGFIDEILEPNEIAASISDERYKLFKSVPSSITKQDNNVTKHLEEQELRRKIIKECETLKLTLNL
complement(1583306..1584571)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: portal protein; ShL2_01500; phage(gi557308058)     0.0                 MIKIASVNIFTRIKRRLIDNWIDETSNTLYDFSPWRNKSFWGNINNTLETNETIFSAVTRLANSLSSMPIKLYEDYKVINTNVSELLTISPNNSVSSYDFINQIETVRNEKGNAYVLIERDTFSQPSKLYLLNSDIVNIAIENNSREVYYIIHAASGNKLIIHNMDMLHFKHIVGSNMLKGISPIDVLKNTTDFDAAIRKFNLSEMQKPDSFVLKYGSNIDVKKRKSVIENFKQFYEENGGILFQEPGVEIDPITKKYVSEDIVASENLTRERVANVFQLPAVFLNANESSNFTKNEELNRFFLQHTLISIIKQYESEFNRKLLTPLDRKKNRYFKFNVKAYLRADSATQAEVYFKAVRSGYYTINEIRELEDLPPVENGDKPFISGDLYPIDTPLELRKSLKGGDKDDNEKVFSNQKENG
complement(1584576..1586267)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: terminase large subunit; ShL2_01501; phage(gi557308057)     0.0                 MTIKVLNKPSPKLLTTWYAKQVVAGKIVANKYVIKECERHLKYLKGHEKWIFDEELAHRPIRFIEKFCKPSKGANNQLILQPWQHFIIGSLFGWVHKETKLRRFKEALVFVGRKNGKTTTISGLANYGVSQDGENGAEIHMLANTMKQARLLFDESKAMIKASPVLKKNFRSLRDAIHYDKTISKIEPQASDSEKLDGLNTHIGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAGFQLNGPLVDMVEAGKDTLNGIIEDERTFYYLASLDDEDDINDSENWIKANPNIGVSIDIEVMKEEWIKAKRIPAERGDFITKRFNIFANNDEMSFIDHTTLSKNNEVIAFDELENHPCTVGYDLSETEDFTSACATFALDNGKIAILSHSWIPKHKVDLANEKIPYREWEEAGYLTIQDKPYIDYTDVYDWILKVNEHHPVEKITYDRANAFRLNQELKNYGFVTEETRQGALTLSPALKSLKELFLDGKVIYNNNPLFKWYVNNVKLKLDRNGNWLPSKQSRYRKIDGFAALLNTYTDIMNKLTEESNTGNIEFLSIKDLMN
complement(1586257..1586565)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: terminase-small subunit; ShL2_01502; phage(gi557308056)     7.23e-56            MKITKNKLIQYIDDYQKSDDILISLYLETYEFYCRLRDELKDSDLMMSHTNKAGATNIVKNPLSIELTKTVQTLNNLLKSLGLTPAQREKIVQQQEDGFGDY
complement(1586705..1587019)       PHAGE_Staphy_phi2958PVL_NC_011344: hypothetical protein; ShL2_01503; phage(gi209363585)     2.25e-48            MARVVGKGKNGRKQYEYDWFYHSKAWSKLRSMALDRDNYLCQKCLAHNKITNAKIVHHIVYVDTDFTKALDLDNLISVCQDCHNKIHANDNDKTNKRNVRVMKV
complement(1587171..1587605)       PHAGE_Staphy_tp310_2_NC_009762: hypothetical protein; ShL2_01504; phage(gi156603991)     9.52e-78            MSTTYEIKPGTFKYIESEIYSHSENKKEIDRLRLAILNPTKQSDENIVYGPLEKGLPVRTTEVMATRLLTNKMLRNLEEMVEAVEYVYNRLSDDRKKVIELKYWNKDRKLKMEQIASECHMHRNTVSSIRRNFVKAVAMHVGMK
complement(1587626..1588279)       hypothetical protein; ShL2_01505                                                     N/A                 MDNDKEIRYQKLKSRFFYISIILGLIIISLVTLFFYRDDNAWLFLSFAGTAISIVLSVIAILITLIDVAGQRQQIADISESAKTLSRSTETLKKSIEDYQNDKNEIKQIINTAFNESIGNKLDEQTNEFIGLLERLKSESNGSEELEKNINEIKDLVIKSNKKEKLDLNNRKYTGHVRRGSPVVKIETDNDNPLNYGNIRIDYDSPLDSSNIKLRDE
complement(1588326..1588790)       hypothetical protein; ShL2_01506                                                     N/A                 MTELTIIILTTIFTLLPFYLYSYLSNKILKICLFLIAEVSLSIAITYASSYHYLEILITLLFLVSLFEIAELKIKNRELQVNMISTQNTVRAIKAVDLGVKEGVVKDYIIRVIDNNDEFIEVMQQRINEKFYVIEAENKEEAIEKYKQLKNHSS
1588874..1589245                   hypothetical protein; ShL2_01507                                                     N/A                 MIFISICSMFIALFSLFISAFNFIRTWKKQRFNISYQIINCYFVPNAGYYAHFQIINNSSEAISITGIVINEILSITDEQLILSNSKGLNLTTQSIPLRIESYGAKQFYCYFEKNKKNFCGRT
complement(1589367..1589678)       PHAGE_Staphy_Ipla7_NC_018284: DNA binding protein; ShL2_01508; phage(gi399529174)     3.16e-51            MNNTLDQLVRQVEEWSIDKNLHLGKPDRQALKFYEEAGEVVAALSRNNKDALKDGIGDTLVTLIILAQQQGWTLKECLQYAYDEIKNRKGKTIKGIFVKESDL
complement(1589679..1590125)       PHAGE_Staphy_80_NC_030652: hypothetical protein; ShL2_01509; phage(gi100026)         3.19e-06            MNAQTSFEVSVMNARLKKVKRHRDKLLEEVKTLKVVNQTLKNEYEILAKAHKVLLDERSRLYDERRKQIIKLKSFNTFKKELLNDYPKLNERVKRYKSKWEENNVSWKLIDYYSQLGRLKQLAQILNYLDELDGTNKFKELIAKLEEQ
complement(1590122..1590805)       PHAGE_Staphy_PH15_NC_008723: putative HNH endonuclease; ShL2_01510; phage(gi119967890)     9.56e-121           MVYMYEPFTHTVTKTTLKHLHHIADIPLNTLCYQKENGVYNEKLRCFFTESLPRLKKKQEFNEKVSPEYEIWKYSDKYDLYVSYLGRMRLPNGKFKFGNGCKGVLIVIYKNKKYRAADIVFETFIKNLKSGYHAYPKDSKYNNITADNLFSTTFKKYRLYRKNDGRAKALYLIDSNNEIVEEFASTVEASSMLFIDRRHIARRCNNRCVNKGLMYMWADEYKRKCVM
complement(1590808..1591254)       PHAGE_Staphy_StB12_NC_020490: hypothetical protein; ShL2_01511; phage(gi939535505)     2.40e-51            MQNIRIIDLNTNDIVKFQLTAKEYKTSHTGIVKRVYAKNEGMQTKWYADVENANGKKFTINDNYDFMKVNEPFIRKVDMVDQPPHYQFDKFNAHAIIEAVGKTYKSASVFYHVGNSLKYLMRSPRKNGLEDLKKAKQSIEFAIKSWEE
complement(1591260..1591484)       hypothetical protein; ShL2_01512                                                     N/A                 MTQTYERNEGGLSDEEYMQLIRIRAAHERALRNERRQQRINHRIRCEQLLKEHRVSSKWFRYLVENDIFPKVRR
complement(1591468..1591653)       PHAGE_Staphy_StB12_NC_020490: hypothetical protein; ShL2_01513; phage(gi939535504)     1.94e-15            MTREKIKSIPRVYLNGKSYRLCDVYKYFPVSDTAVRRRYKKGLRGSELIYGKGVHKYDTNL
complement(1591654..1592058)       PHAGE_Staphy_Ipla5_NC_018281: resolvase; ShL2_01514; phage(gi399528943)              3.65e-73            MRIEIKFNEIFKAPIGSPRPRFRNAGRFVQTYMPTSYMNHKDYIRKQMPKLLLTSSLKVSLFFYFIPPKSWSKNQKLLAIGQYKRTKPDIDNLIKTVLDAANNRLWKDDNQIVEIYSFKQYAERPKIILELEEL
complement(1592071..1592313)       PHAGE_Staphy_IME_SA4_NC_029025: hypothetical protein; ShL2_01515; phage(gi971766729)     2.40e-42            MGLKENQPNAYDLFESDGWPLLRVLPRDDGSFYLTNLGGMAEKHFKQFVTKDELAEMKRKHKLFKQKELQHQTTIDEFLL
complement(1592303..1592464)       PHAGE_Staphy_80_NC_030652: hypothetical protein; ShL2_01516; phage(gi100019)         1.65e-11            MTKDNIKLILDCSDVYAQKLIRWSNCNEKALVNLINQKLEERRKREAMVEYGA
complement(1592464..1593270)       PHAGE_Staphy_55_NC_007060: ORF016; ShL2_01517; phage(gi66396129)                     3.97e-143           MQAFKNIAKPPKFKSKVIKKEKGLKCEKCSRNYDYYEFEKQDGSIQKVKFGCDCEMKEFARQSTENYHKKQKRIKAEKIFKQSIINQSLANATFDNYKIDENTQPQLAKAKRICKKYADSFNLDNKQSLLIQGSFGTGKSHLSMSIVKEIKAKGFTVLYMNVPQLISTIKNTYNNGTNMTEQELAKIMSDVDLMVFDDYGINMNDFATSKMFELIESRIGKHNIFTTNLDEKEMTRSKDLQRIFSRIMSNTTLIKMDGQDYRTKGLRF
complement(1593283..1594035)       PHAGE_Bacill_vB_BhaS_171_NC_030904: hypothetical protein; ShL2_01518; phage(gi100052)     2.62e-67            MSNQLIDDYPILVLPKLAEKIGLNEAIILQQIHYWLKDSKHKYDNKNWIYNSFSEWQKQFPFWSVITIKRTIYSLEKKKLLYVGNYNKAKFDKTKWYSINYQCLEDMIQPSYQNDTTSVSKRDDGVYQKATTNTRDYTETSSETTRNSATDVTQVQFNQWWNLYDKKLDKKKAFSLFKSALKKHKFETIMNGTQAYLKTITNKQYQKYPKTFLSQESFLNDYSEEIDKNTNQYTEAFERAAQSDMENLPF
1594099..1594887                   PHAGE_Staphy_phiETA_NC_003288: hypothetical protein; ShL2_01519; phage(gi17426249)     1.37e-26            MYKNYSYLIQKQINNINAHNVHLSSTVKKALEVTNSPSYKHTIVTIDSLMPQIKPLLNFYNSNPTLMNDLKTINNALPKNFPFENAFYSNPAKVASRINAKQLIQINKMIENYQNQFKSSLFSNSVLERIKRSIDMNINSDLIDNSFKILRYEYVKNTLFYNNSIRQIKWEPVITNSFNTFKEFGEIRDDVINTSENSKLQNAIDSMFKGWLLSHIGEEIDELTNHYITFLANVLLPFIPHEYRAICFYIIIFIVSYNKSNR
complement(1594877..1595557)       PHAGE_Staphy_CNPH82_NC_008722: hypothetical protein; ShL2_01520; phage(gi119953722)     2.35e-126           MPKIRNYITQDDGTTTVVIENVEIDNKTSLLLDNDLEVECEVKLVDPFLITDKQRRKVFALCNDIESYTGQPREYMREMFQDYVTFLYGYDKHISLSNCSREQARQVIEVILDWVFHNNIPLNYKTSDLLKNDKSFLYWATVNRNCVICGKRGELAHYEAVGRGMNRNKIEHYGKRVLALCREHHQEQHSSGIKTFNNKYHLNDSWIAVDERLNKMLKGQKVNFIY
complement(1595558..1596106)       PHAGE_Staphy_88_NC_007063: ORF027; ShL2_01521; phage(gi66396359)                     1.15e-94            MNEEWRDVVGYEGIYEVSNKGRIRTHKYKTTYTKKHGVRHWKQRYLKDKTPNGRDVRVALWKDGKPNYYLVHRLVAKAFIPFVKDKNCINHIYGNPKNNNVENLEWCNHLENNMHALETGLTTTNMAVKLINHLDIEYEFISMSRASEFLGRNKGYVSSRLKNNCSKLTDVNGNKYKVEKLI
complement(1596119..1596553)       PHAGE_Staphy_TEM123_NC_017968: single-stranded DNA-binding protein; ShL2_01522; phage(gi388570359)     8.55e-65            MINKVVLVGRLTKNPEYRTTPNGISVSTFTLAVNRTFNNSNGEREADFINVVTFKKQADNVNNYLSKGSLVGVEGRIQTRNYENNEGQRIYVTEVVAERVHFLDSKGNSQQNNSSQQQRQVPAGNAPFANANGPIEISSDDLPF
complement(1596550..1597224)       PHAGE_Staphy_37_NC_007055: ORF018; ShL2_01523; phage(gi66395747)                     4.65e-107           MEEVTQELNLFQKIADVKANIDGFTKDAKSYNYSYVSGSQVLHRIRNKMIENNLLLIPKTTEENYKQIQVTRFNQKAKREITVTEFVVEMKLTYVWINADKPEEQLEIPFYAVGQQDDVSKAHGTGLTYAERYFLMKFFNIPTDEDDADAKEKQEKYANSSNQLKDILRDEANKFIQIAENSGFSEKYKDEISKLKMMDVNILDKQQIIKTRNLIRRWLGEIES
complement(1597225..1597710)       PHAGE_Staphy_StB12_NC_020490: hypothetical protein; ShL2_01524; phage(gi939535491)     7.81e-94            MPSLFDLSADYQQVYNLIAEQEDEQILKDTLASINDAIEDKADGYVAVIRTLESDNKAIDEEVKRLRQRKTSNQNGVKRLKESLQEVMEKTGKVKFKTALNSYSIANNPPSIEVTNESLIPKSYWIVQAPKLNKKEMLADIKNGIEIKGAEVIQTRSLRVR
complement(1597694..1597957)       PHAGE_Staphy_StB12_NC_020490: hypothetical protein; ShL2_01525; phage(gi939535490)     1.00e-16            MKYKLLKIANELNDLIMHSKEHIKCDFSTGECKNEVKVFLFHYSDRYKNNCEIITFFEHYEGKNILENFELAKKVIKGECLINAEFI
complement(1598026..1598205)       PHAGE_Staphy_IME_SA4_NC_029025: hypothetical protein; ShL2_01526; phage(gi971766719)     5.53e-10            MTKETKVTLITGFTFITIFFALMIAEVFITRATAYALFASLFMYLFFDKYFFEQKKTEC
complement(1598218..1598496)       hypothetical protein; ShL2_01527                                                     N/A                 MSNISIEIDNDFINQLVQEKVESILSNYKREVAAVDIKDLVTITGLSKSTLVNKIVVEPEIVEITRRVGTRVLYLYPQVLEAYQKILNRINN
complement(1598555..1598746)       PHAGE_Staphy_vB_SauS_phi2_NC_028862: DNA-binding helix-turn-helix protein; ShL2_01528; phage(gi971750165)     3.91e-28            MPEQLTIKKWRLLKDLRQQDVADKLGVARKTVGYWEKEDANVSNVVIYALAKLFNIEIDQIKV
1598909..1599250                   PHAGE_Staphy_vB_SauS_phi2_NC_028862: DNA-binding helix-turn-helix protein; ShL2_01529; phage(gi971750164)     3.59e-35            MSNKSARKIFSENLQRLMKNKNIDQKELAEAIGVTQPTISNWIQELKYPRIKRIQQLSDYFNVTKSELTEEKTTMQKHQVSALINSDVTEEELKEIENFIHYLISKRDNKGDK
1599408..1599578                   hypothetical protein; ShL2_01530                                                     N/A                 MHQFKELIEGINIEYKEMPEKLECLIVDKNLYINTKLSSNTDFRKSYSILKNLNQT
1599835..1600476                   hypothetical protein; ShL2_01531                                                     N/A                 MSLTFFFPLGVFLIWRYTFFKKSTKVIISLIFTIFFVITLILPNIDSNEESDTSNHQQETKDSNKIEIPASNTNEDPKINNEKNSIKTKDVIIDNSENQTNQLRNSVENELHLGKVQELGQFGTNTNILISIDHNLTKNMTKKTINQAIAQTLIGINKANTDVKSANIGIKINGTRVASSRWNEDAINNIEKYKNEIYDNPAKYAESFNNTYK
1600543..1600953                   PHAGE_Bacill_phi4B1_NC_028886: site-specific recombinase; ShL2_01532; phage(gi971821285)     1.91e-16            MASFEKRGSKWRFKIHYNDNLGRKKYISKSGFRTKQEAKRAAIELESKINKGYKEEKNYTLTEWLDYYLETWRKNKISDSSFDIEQFSKKRILDFYNDINIKDITPSIHQSFINYLIEKGYSKSTLSKTHNLLKRS
1600977..1600988                   attR                                                                                 N/A                 ATTTATCACAAT
1601007..1601666                   PHAGE_Bacter_Rani_NC_029084: integrase; ShL2_01533; phage(gi985759361)               1.09e-26            MQHIDLKQQEKAKYLPKDKIKPFLDMVRKRDVYQYFLFRTLIETGMRIGEASALNWNDYDRKLKTLSITKSYNQKSNKFGPTKNKENRVIFISDELAKELFKLKNLQNSNKIVNADFYNNSYDYIFCNEFGEPLPRSTTHNTMMYVTGKLLGKDNRLSIHKLRHTHATLLLESNVPMKVIQERLGHKSEAITSEVYSHVTKKMNDDAKENFEKYIKNVF
1609358..1609369                   attR                                                                                 N/A                 TAAAATTAATTT

#### region 2 ####
2021603..2021617                   attL                                                                                 N/A                 GTGGAGACGGCGGGA
complement(2026693..2027055)       PHAGE_Staphy_TEM123_NC_017968: mobile-element-associated regulatory protein; ShL2_01937; phage(gi388570351)     1.94e-27            MRLRKATINYLESEFIYYKHLSRDIERIRNSKAYPSQYDKQKALKNRRLKRLTRIKEAIEHVYITSNEDSRILIDRYYFNNIDNLNLTGVALTINVSKSTAYNLRNDILLRLSDELGILR
complement(2027113..2027382)       hypothetical protein; ShL2_01938                                                     N/A                 MCDTADKLNMISIEDMYNRAMAIKKCSVIYYDDLMNDKERAVWHTLSKIQKGLGVILPFNLMIARNGVDRRIVPSIKLNDDRIFIYPNR
complement(2027388..2027960)       PHAGE_Staphy_PT1028_NC_007045: ORF009; ShL2_01939; phage(gi66395173)                 7.71e-82            MSTLNPRQEKFVAEYLKTLNVTQSAIKAGYSPHTASEQGSRLLKNKKVAKYIDEQRKRVIDEGVLSANELLHILSNAAVGDESEVREVVVKRGEFQRNPDTDRMNLVYNEHVEMVEVPIKPSDRLRARDMLGKYHKLFIDKKELSTDTPIFINIGEWPEDEEEEKRKALDELHEQHPNRTMIINDLPLED
complement(2027971..2028300)       PHAGE_Staphy_PT1028_NC_007045: ORF014; ShL2_01940; phage(gi66395178)                 1.38e-13            MSYDREAIKQFISDYSKENHDTTYNDENINVDDFFSLSDEAEPFSLNENTSNQAFFNELDQLIYAVGTRREYYIFFLLCEGKSMNEIAKIFNLSRERIRQLLNGLLDKL
complement(2028297..2028746)       PHAGE_Staphy_PT1028_NC_007045: ORF010; ShL2_01941; phage(gi66395174)                 3.07e-38            MNLKRVKYPLIYHENKISEYTLLTEYNPKFINTKIKAITMQIEMMYHLNISHMTTSDVHGVITISYPLEKLAITIIEEKEKLKYFQTKSNSNMQQLKQVIKRYTPGEQKEIMYYMQSNGSTIDYDLIERLQRDLYKLRHANKQKVSVKA
complement(2028801..2029010)       hypothetical protein; ShL2_01942                                                     N/A                 MARKYNLDKVSNYLLTETKLSADECHKVLDVVEEQFSQNIRQQKKDELAQKSQRESSFRKMAEENRIVK
complement(2029010..2029597)       mobile element-associated protein; ShL2_01943                                        N/A                 MKTAKYFDEYNEYVTGQRENINKIENERQELSQRIEEDKAKYKELIANSQDDEADALYTTFDSNEKKLKALEKRLSTKKEVFDEARRKKAIELIKHQADLPHLYKKDKERILAKFEPIVEEYNKVVDEIAALNDEYEYEFYRFVKPYDKENFEKDKEVRAEIKNHFSPNKYSNYVSGDELPFIDIRNKMQLRGAK
complement(2029676..2030008)       PHAGE_Staphy_PT1028_NC_007045: ORF015; ShL2_01944; phage(gi66395179)                 1.03e-37            MTITIEKELTNDHIRVLNVLRNTKHEIITKQNIFNQLNMEFNRNNDRWLRNTINSLVVDYGYPIGYSYKKDARGYFMVKSEEQKELALRSIKRHIEGSLKRYEALKKTEI
complement(2030371..2031015)       PHAGE_Staphy_PT1028_NC_007045: ORF008; ShL2_01945; phage(gi66395172)                 5.70e-99            MNVEIITNQFETRAGTLLRAFSGLSESSYKAPYVFKIYNDPFNTVYLISKGKMYAHVLIKDCEVRKTFEIASVKHTEKLIESIEGHYAGYDLYDGTHDTISDMMASFMFDNDYFMYGLETFAESNNSDIFDYMSRDFNIDELEGVQSSNADVIGNMEALYQLATGINEPAPELVEGLKIITEFIQNEKANEVDSKALIKRLNELKQSYYDGVKA
complement(2031012..2031293)       PHAGE_Staphy_PT1028_NC_007045: ORF017; ShL2_01946; phage(gi66395181)                 2.52e-31            MQETHCEFNIDDELRKLGLLVGISEEIYYCSISRISTLYLENFGTKWVAWRETYDLQNNKRVSYRAIAEGSFELVAARTKNYLNYIKRKQGIK
complement(2031268..2032089)       PHAGE_Staphy_PT1028_NC_007045: ORF004; ShL2_01947; phage(gi66395168)                 2.90e-125           MKMYNAAKYLLSKDVQVVPLNDNKKPTVAFKNVTIDDDFIDSNYLAYANTNVLGVLTRGLWCIDIDINHVNGENGFDSLKDIFYYEEFVTNAQNTLVQTTASGGKHVIFKKREGVEYAQKIGYLPSVDIKAHDNNYFVLAGSKTAKGLYTSNKKPVIAYDGEFEDRIFSKRGNYLQQTMEKFSVKSVLPNHNFNHLQHTGKGGLGKEAYNRVINGESVERNNDVYKAISYALQCNVDIEPLKVIIGDVKANGDEFTLEEWEASYNSARNSLRI
complement(2032260..2033873)       PHAGE_Staphy_PT1028_NC_007045: ORF012; ShL2_01948; phage(gi66395176)                 7.19e-57            MDEVSLYKKHYQFHSKLDNVDTPNLSRIKEISKRIYFAAITTEKQIFNNKGSVYHQTKDEFAGDYINNLTLDYTIKPREIGAVYGTISVKTTVENGEEKKEAHFKSSKTNSYAKFIIDLITEKVIYSKELDSFIKLKNNQYEIIDNTNFSLEYPVDNKYHINDFLDVMLEVYKEYFINDYQYNIYPYAIAGNDWIYNCKELEFVDKKITSNDYYIIKYDVDKKNINTNLAQQFFDLVSDNERSKNNLMLVHAYTMYRKMKLIQAEKWFLIKDFGRSGKGLFMETFEKLLNVNKVNFDSLLSSGFEAANEWLNFYGADIAHANETGEINKSMMRILRKIATGENISGRGIQRNNVKFKNNAVLILDTNESVDTGEITANRTRTVKIAFKDRPKNETDEERYKAFKPFWDFVKPNGKNSVNASVSFLILSLEYLKQIGREFKFNNVTLKNYYNEDELTDTQILILETLSRQDFIFSGDEILQKTIEEDYKNLRYKKAKEDMKKIGVAINKQKWIEGQNTKVHIVENKELFIMALDLIET
complement(2033961..2034272)       hypothetical protein; ShL2_01949                                                     N/A                 MVKDLKQIKESFEIADISNKIQAVIDYVCDEQEGLEELRDYYRESNQVVGEKQTNDNMKSNFIIVSTLLSVIRDYESELNDIDTVIKRASSDVNSLATKSDNA
complement(2034291..2034497)       hypothetical protein; ShL2_01950                                                     N/A                 MAAKLDVNKLNIMHAINWIIKNEEEIIFESQSQLSFFSREDLEKIDYCKCTLESLIEAKEIYNKQKIS
complement(2034509..2034847)       hypothetical protein; ShL2_01951                                                     N/A                 MMTEILKAYDDVAVTAMKVSQLRGEADRISELTGYLAEKSKTYREEGDFLGAEAIELIVLDDLGSDFDIVNGQFQEEMKTWEQKYKRFENVCTFYGISVPSLKNEKVIKLYK
complement(2034851..2035264)       hypothetical protein; ShL2_01952                                                     N/A                 MEKEQKLNKQIKFGKENKKMKNLTNQDFKDIENEVKRDLIFKDKKHIKKMAKLLQKRRNKDISIIKKMYPYLNDNEILEITNDYQEYKNIVQATETFTDFPINYEDSNISKFLTKDDIAELKIAIEEMAIFVESLED
complement(2035268..2035468)       bovine pathogenicity island protein; ShL2_01953                                      N/A                 MKQQVVITKSVVGWFNVKDVKGNLLLNIAPDAFKKHFPEVSPNISIACIQLDINRIVELKDKKVSV
complement(2035481..2035699)       PHAGE_Bacill_phiCM3_NC_023599: transcriptional regulator; ShL2_01954; phage(gi589892743)     1.56e-11            MTNLTYPMLYIARKEKGDTQRKVAQKLGISPQRYQLKESGKAYFTLPEAKILSEMYGMSIDDLFSKNIKVGS
2035853..2036590                   PHAGE_Staphy_phiPV83_NC_002486: hypothetical protein; ShL2_01955; phage(gi9635701)     1.24e-07            MIVFRLKEIMEEKNLKISDLNEQTGISRNSISSLLNGKTRGIQFDTLEKITIALNVDVADLFKNVFNELIIKLNDISKVETYRRSSNFKKKDNLIVKKYAITCDLIEDNDLKKGFIPYEISIELKPYPEIEIRIDFSYSNLFNYLVNFISENSNFKLLLVHYLSQKIYYLEFERIKEIKSFYNISDEKIFISSSSPGILMHVPLCDNKGILEDTRLKEIINELSLNTNYNYTYDEQITIAHKRKK
2036596..2037693                   PHAGE_Bacill_phIS3501_NC_019502: phage integrase; ShL2_01956; phage(gi422934298)     2.07e-95            MISIEHNLNLSHNIHKDAKRGTYYFRITYYGKTNKRKEIKRSGFKQRKEAVKKCNEIMDELEGIGQINKLPFDKLAHEYLDWYSARRKASSVKSLKTHLNNHLIPHFNSIDVFNLTTQDVMKFQNKKLKEGHSGEYLKKMHVFLVSLLNHAMKYHDLTSNVASLVGNFEIESNKRLNYWTLDQFNQFYEVLPTIEQKLFFKLLFYSGARKGEIRALTWQDINFDDNYIHINKTDYHGDVTVPKTKAAIRDIYLPTHMMDDLKEYLNWYQNNNIYKSEYVLFGTFFKAFSESKIDRWFTNAYKLLPNDFPKIVIHEIRHSHASLLINHGASLMVIAQRLGHSSIEEVSTRYGHLYPSTQKEIVKYL
complement(2037805..2038164)       tRNA                                                                                 N/A                 GGGGGCGTTTTTGGATTCGACAGGGGTCCCTCGAGCACATTAAGCGTGTCGGAGGGTTGTCTCCGACATCAACACATTTCAGTAAATATAACTGACAAATCAAACAATAATTTCGCAGTAGCTGCGTAATAGCACTCTGCATCGCCTAACAGCATCTCCTACGTGCTGTTAACGCGATTCAACCCTAGTAGGATATGCTAAACACTGCCGTTTGAAGTCTGTTTAGAAGAAATCCAATCAAACTAGCATAATACTGGTTGTCTGTTGCTTACTATTATGCGAAATTCATCAATAGACTACACACGTAGAAAGGTGTGTATCAGGACCTCTGGACGCGGGTTCGAATCCCGCCGTCTCCAC
2037805..2037819                   attR                                                                                 N/A                 GTGGAGACGGCGGGA
complement(2038369..2038839)       PHAGE_Staphy_StauST398_5_NC_023500: SsrA-binding protein; ShL2_01957; phage(gi588498309)     9.77e-94            MAKKKTKSPGTLAENRKARHDYNIEDTIEAGIALKGTEIKSIRRGSANLKDSYAQVKRGEMFINNMHIAPYEEGNRFNHDPLRSRKLLLHKKEIIKLGERTREIGYSLIPLKLYLKHGQCKVLLGVARGKKIHDKRQALKDKAMKRDVDRAIKDRY
complement(2038864..2041242)       PHAGE_Lactoc_Q54_NC_008364: putative ribonuclease; ShL2_01958; phage(gi115304286)     1.06e-110           MNLKQSIEEIIKQPDYEPMSVSDFQDALGLNSADSFRDLIKVLVELEQAGLVERTKTDRYQRKQSHKSSNSKLIKGTLSQNKKGFAFLRPELEDMDDIFIPPTKINRALDGDIVIVEIQKSKGEHKGKIEGEVKSIEKHSVTQVVGTYSEAKHFGFVIPDDKRIMQDIFIPKGQSLGAVDGHKVLVQITKYADGTDNPEGHISAILGHKNDPGVDILSIIYQHGIEIEFPDNVLKEAEAVPEEIKPDEIKGRTDLRDELTITIDGADAKDLDDAISVKKLKNGHTELTVSIADVSYYVKEDSELDKEAYDRATSVYLVDRVIPMIPHRLSNGICSLNPEVDRLTLSCRMEINERGEVVNHDIFDSVIHSNYRMTYDAVNQIITEKAPDVRKQYQEITPMLDLAQDLSNRLIQMRKRRGEIDFDISEAKVLVNNEGLPTDVVLRERGEGERLIESFMLAANETVAEHFNKLEVPFIYRVHEQPKSDRLRQFFDFITNFGIMIKGTGEDIHPSTLQSIQEEVEGRSEQMVISTMMLRSMQQAHYDDTNLGHFGLSAEYYTHFTSPIRRYPDLTVHRLIRKYLIDNSMNNKELHKWEDKLPELAEHTSQRERRAIEAERDTDELKKAEYMIQHIGDEFEGIVSSVANFGMFIELPNTIEGMVHISNMTDDYYQFDERQMALIGERQAKVFRIGDQVTVKVTHVDVDERMIDFQIVGMPLPKNDRSQRPSRGKTIQAKTRGKSLDKSKDDDHKGKKKKRKQRKGKNQRSRDKQGKTNHKPFYKDKSVKKKSRRKKK

#### region 3 ####
2449732..2449746                   attL                                                                                 N/A                 ATATGCCCTTTTTTG
complement(2452809..2453381)       PHAGE_Staphy_PT1028_NC_007045: ORF009; ShL2_02350; phage(gi66395173)                 6.90e-85            MSDLNPRQEKFISEYLKTLNVTQSAIKAGYSPHTASVQGSRLLKNEKVAKYIEEQRKKVIDEGVLSANELLHILSNAAVGDESEVREVVVKRGEFQRNPDTDRMNLVYNEHVEMVEVPIKPSDRLRARDMLGKYHKLFIDKKELSTDTPIFINIGEWPEDEEEEKRKALDELHEQHPNRTMIIDDVPLED
complement(2453383..2453721)       PHAGE_Staphy_PT1028_NC_007045: ORF014; ShL2_02351; phage(gi66395178)                 8.47e-15            MSYDREAIKQFICDYSKENHDTTYNDKNTNIDDFFSLSDEVEPFELSENTSNQVFFNELDQLIYTVGTRREYYIFFLLCEGKSINEIAKIFELSRERIRQLLNSLLDKLEEG
complement(2453718..2454167)       PHAGE_Staphy_PT1028_NC_007045: ORF010; ShL2_02352; phage(gi66395174)                 3.07e-38            MNLKRVKYPLIYHENKISEYTLLTEYNPKFINTKIKAITMQIEMMYHLNISRMTTSEVHGVVSISYPLEKLAIDIIDEKEKLNCFKTKSNRNMQQLKQVIKRYTPGEQKEIMYYMQSNGSTIDYDLIERLQRDLYKLRHANKQKVSVRA
2454415..2455617                   SAP domain-containing protein; ShL2_02353                                            N/A                 MFNHKNLDYKSNKSNNNHKNISNSETTRLNNVQSNSHIKKDNVPHDTEINNSKKVKQTNPITNSKTNTSNKNKINLNENIQKHNKVLVSEVKDDNNNNIHNSDLNANDILILHLNKNRKVGKEVKNHFYLLENQINVDKILNKLINLGFLDIKSNFDVSLPYLKVPELKDILKEYKLKLGGNKPELIERVKTNIDENAIELPQVYVPTSKGNEIIGETEYILHFYNSPIISLGSAHKIAKEVLNVDDKIEYIYLYLLKQNQKSKNSDHRTANIINNLVFYYKKTNKNKNVIRKYTNYSTYLSVAQGIHSAAFLYSGKENIIDRLFIYFNYHLEYYENMLFIDNVSRSLFKNLFYEDVNSFEDTDKNFCDDICELLFAQIYNNKNITLNNLPTINYILKKN
2455813..2455980                   PHAGE_Staphy_StB20_like_NC_028821: hypothetical protein; ShL2_02354; phage(gi971746521)     5.36e-19            MEILNYKISYEYGSDLYTVTAKTNNGKTFTYTFSENRTLKEIRYTLEEIAKQLDT
2456549..2456707                   PHAGE_Staphy_JS01_NC_021773: hypothetical protein; ShL2_02355; phage(gi526003552)     1.22e-09            MRILNCKIKLKKITYEVETNNNNYFKHSLPKDINTYQVGKILRNISDELDGV
2456815..2458029                   PHAGE_Staphy_tp310_2_NC_009762: integrase; ShL2_02356; phage(gi156603950)            3.14e-129           MWHEKFTNKHGETKYRYYEKYKDPLTNKWRRTSVVLNKNGKQSQKEAQKRLNERIEAKLNDKTPTNLKTLTFHAACDEWFERYKLTSGSKQSTITTKSYKVAHIKRNIDKDILVENMNADVIQDLINSSLKDGLSHKLVKDDLSIIKNILRYAQKKYNITDISYIDDVVMPKKATTREEVKAKRENYLEMAEVLAIVEELNRIANKKRASYMKRSYLFTAYIVEFQVLNGMRIGELLAIQPDNIDFENKKLVIDGTIHWRKDGNKVGFKDTTKTASSYRTISLTTRSCDILRRVMLENKKAVQWEIMYVDRGFIFTSHRGNPLPLTSINRNIQIAAQNIGIEKHVTSHTMRHSHISLLSQLGVSLRAIMERVGHTDHKTTLQIYSHVTEQMDKDMMNKLEKIRS
2458115..2458129                   attR                                                                                 N/A                 ATATGCCCTTTTTTG

#### region 4 ####
2510924..2510935                   attL                                                                                 N/A                 TAAAAAATATAG
complement(2510967..2511641)       PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; ShL2_02410; phage(gi985761246)     4.08e-160           MNYFRYKQFNKDVITVAVGYYLRYALSYRDISEILRERGVNVHHSTVYRWVKEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWNYLYRAIDAEGQTLDIWLRKQRDNHSAYVFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCYCTSKYLNNLIEQGHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIMLAS
2511709..2512437                   PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; ShL2_02411; phage(gi371496158)       2.00e-18            MAQTIAKLTDAVKQYDKHKVLDHISLNIQEGELIGLIGPSGSGKTTTIKCLLGMEKLNSGTTEIFEQRMPNRQVLSHIGYMGQSDALYESLSAKENLIFFGHLAGIKGKQLISSINHNMGLVNLEEKLNKTVNTFSGGMKRRLSLAITLLSDPSLIILDEPTVGIDPKLRQQIWNQLKYLTKQGKAVIVTTHVMDEAERCDKIGLIVEGRLFAIGTPNELKQKFNVETIEEVFIKGEEVKNQ
2512434..2513519                   Inner membrane transport permease YbhR; ShL2_02412                                   N/A                 MKLLAMIQRVIIELLKDKRTLALMFLAPLLVLTLMYFIFNSDEDTTLTIGIDNSVSTQITDSIESNNVKFKDFTSSQHIKSKIEHHHLDAFIYQNNQTIHVTYTNEDPSKSASIKQLLHQSIQKNKMNDIKKVMVSLPQSAKNKDTKDIQLDNTYLYGDEDSNYFDKMFPILMSFFVFLFVFLISGIALLRERTTGTIERVLATPIKRSEIVFGYLIGYGIFAIIQTLIIVLFSIYLLNINLAGSLAYVILINILLAIAALVMGIFISTFANSEFQMIQFIPIVAIPQVFFSGIFPLENMSPWLSNIGYLFPLRYAGHALTNIMIKGQGWSNIWFDVLILFVFIIVFTTMNIIGLKRYRKV
complement(2514351..2514836)       immunodominant antigen B; ShL2_02413                                                 N/A                 MKKFSKIVLASGIVLGFSVTPELFNATEAQAQESIEPYYNYDGYTAYQSGFILDKNFKESLKYDNFTINGYQISKNPTGDNRINLYDQTLYSVSENKANGVFFSLDGNSINENTLIQNYGQPNYYSPTSAWGEVYMYKIGNKNVRFYIDNGYVNKCQIMSE
complement(2515146..2516735)       PHAGE_Staphy_Pvl108_NC_008689: putative transposase; ShL2_02414; phage(gi119443708)     0.0                 MYKNYNMTQLTLPMETSVLIATNDISRHVNDIVETIPDNEFDEFRHHRGATSYHPKMMLKVILYAYTQSVFSGRKIEKMINDSIRMMWLSQNQKPSYKTINRFRVNPKVDALLESLFIQFYSQCVKQNLIDDKAIFIDGTKIEANANRYTFVWKKSIQNHESKMNEDSKALYHELVTNKIIPEIKEDHDNELTKEEIDLIGSHLDKEIEDLNQHINNEKCTKTRKQIRLKRTKIKKYKKQINDYFERKYRYEFQKSILKDRNSYSKTDHDATFMRMKEDHMKNGQLKPGYNLQIATNSQFVLSYNVYQNPTDTRTMIPFFKFNSRAYGHLPEYIVADAGYGSESNYKAIIDDFNRTPLITYGMFIKDKTKKYKSDIFNTQNWNYDEINDEFICPNNKRLGFKRYAYRHDKYGYKRDFKLYECDDCSECPLKNQCMNFNSKTNKKIMKNYNWEYFKSQINKKLSEPETKNIYSQRKIDVEPVFGFMKAILGFTRMSVRGLNKVKRELGFVLMALNIRKVVAQRAENNQKL
2517069..2518382                   PROPHAGE_Staphy_N315: transposase; ShL2_02415; phage(gi15927655)                     7.71e-98            MCKSILNTLRIKDKNLNFSDEVIEKKHKGRMSLFYYAELTYQPTHCENCSTKNENFSIVKNGKKTSTITLLKIMEMPAYLELQKQRFYCKSCDSHFTAKSNLSTLIALFLIKQKLAVLDKAQEYRSQKSIAKSCLVSSMTVSRVINQAASDVGQSSFGALPEHLMMDEFKSVKNVIRKMSFIYADAVSHRIVDVVADRKLKSLKDHFYRYSLKLRQKVKTITIDMMNHISLIKQLFPNAKIIIDRFHIVQSLNRALNMSRVHVMNCYRTSNRPLYNKYKSYWKLFLKPFETLEAFNYHKVHLFKEWKTEKGIINYLLGVDVELFNTYHYVHELRRLLKENQIEKFNHKLFSIHLSDVCPKLRPVIRTLRRLATFIENTMTYSNLTNGPLEGINNKIKLIKRVSFGYRNYDNLRNRIIITSRLFASTTKKEIKKLKVA
complement(2518511..2518759)       Transglycosylase associated protein; ShL2_02416                                      N/A                 MGFIVMLIVGGLIGWVAGMIMGKDIPGGIIGNIIAGLIGSAVGSKLLGTWGPVWGGVPIIPALIGAIIVIFVVSLILKALRK
complement(2518937..2519221)       Amidohydrolase; ShL2_02417                                                           N/A                 MTVEGFEDLKALVKQGVYVKAKGFGRIEVEPIAAIKELIDINPDAIMFGTDLPSTRAKRPFSEQDIELIQKHFDEETQEKIFYKNALKFYRISE
complement(2519477..2519686)       hypothetical protein; ShL2_02418                                                     N/A                 MKLFDSHFHIIDYDFPVKENNGYMPPSFKVNDYLNHTQQLNVVGGAILSGSFQGFDQDYLISALNQLQG
2519902..2520159                   PHAGE_Bacill_BM5_NC_029069: hypothetical protein; ShL2_02419; phage(gi985757869)     5.79e-05            MSSHTLFNLRTKRNLEINELTELINKKYGTHYEPHQLWEWENHQHEPKFKDAMILADFFDTPYQMLVESKYKEYQQQIDDIDIRL
2520362..2521432                   PHAGE_Lactob_Lj965_NC_005355: putative superinfection immunity protein; ShL2_02420; phage(gi41179219)     3.45e-19            MAFNEEPPNNTNSSQEQSQENNIHNQDKYENVSNNESTQNDDSNSSNKGKYWLIGCGAGCGCLVILIILVLAACVIFMKVSDSISSSDSENATHESKQEGNSRKAGGNDKEEALQRAETYAKSMYMSKKGIYNQLTSSSGDKFNSSTAKYAVNHLKDVDYKENALKTAEESSDNLHFSKKELTDYLKNDENSGQFTSEQVDYAMKHAKIDYKENALETAKHISDQSYSSKSQLEDELTSKDGRQFTKDEADYAMKHLKTDFKKNALKNAQRYMQDSIESKSELYNKLVEYDDFTEDEAKYAADNVKVDYKENALERAKSLSKDGDTSKSDIKDMLSSKDGFKFTEEEAQYAVDHLK
2521744..2523441                   PHAGE_Staphy_Pvl108_NC_008689: putative transposase; ShL2_02421; phage(gi119443708)     0.0                 MYKNYNMTQLTLPMETSVLIPTNDISRHVNDIVETIPDNEFDEFRHHRGATSYHPKMMLKVILYAYTQSVFSGRKIEKMLNDSIRMMWLSQNQKPSYKTINRFRVNPKVDALLESLFIQFYSQCVKQNLIDDKAIFIDGTKIEANANRYTFVWKKSIQNHESKMNEDSKALYHELVTNKIIPEIKEDHDNELTKEEIDLIGSHLDKEIEDLNQHINNEKCTKTRKQIRLKRTKIKKYKKQINDYFERKYRYEFQKSILKDRNSYSKTDHDATFMRMKEDHMKNGQLKPGYNLQIATNSQFVLSYNVYQNPTDTRTMIPFLNSIQETYGHLPEYIVADAGYGSESNYKAIIDDFNRTPLITYGMFIKDKTKKYKSDIFNTQNWNYDEINDEFICPNNKRLGFKRYAYRHDKYGYKRDFKLYECDDCSECPLKNQCMNFNSKTNKKIMKNYNWEYFKSQINKKLSEPETKNIYSQRKIDVEPVFGFMKAILGFTRMSVRGLNKVKRELGFVLMALNIRKVVAQRAENNQKIYKKDNFYIISIEIVFFSLIQELYVPDSFLDIVQLSV
complement(2523547..2523789)       30S ribosomal protein S18; ShL2_02422                                                N/A                 MAGGPRRGGRRRKKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRARHMALLPYVKDEN
complement(2523837..2524349)       PHAGE_Staphy_TEM123_NC_017968: single-stranded DNA-binding protein; ShL2_02423; phage(gi388570359)     2.00e-72            MINRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINVVVFRRQAENVNNYLFKGSLAGVDGRIQSRSYENQEGRRIFVTEVVADSVQFLEPKNAQGGQRNQSNNNDFQDYGQGFGGQQSGQNTSYNNNNSSNNKQSDNPFANANGPIDISDDDLPF
complement(2524371..2524667)       30S ribosomal protein S6; ShL2_02424                                                 N/A                 MRTYEIMYVVRPNIEEDAKKAVVERFNGILASEGSEVLEEKDWGKRRLAYEIEDFKEGFYNIVRIKTDNNRATDEFQRLAKISDDIIRYIVIREDQDK
2524958..2525764                   PHAGE_Lactob_LP65_NC_006565: hypothetical protein; ShL2_02425; phage(gi56693136)     1.70e-38            MFKKTTSSIACLTIMATSIGALNANASEQTEGSQKGTMGYGYQKYLKNHPNEQSNATSNRSTFSTKSKVITTQNGDRVLDISEWQGNLTDSQVKQLKKDYNFIIIRGQYGSEYVDQCLENNSALLDKNNMKFGVYSYSLYENADDARNEAQTLYSRAPKASFYVNDFEQNSITSGDADTATKAWADEMKQLAGNKKVLFYSYENFMTNNVPNAVSAYDGYWLAAYQEQEPNREKVLWQYTDSYYAPELNQNVDANYIDANVTADWFTS
2525830..2526021                   PHAGE_Staphy_phiRS7_NC_022914: hypothetical protein; ShL2_02426; phage(gi560185984)     3.23e-32            MQLDLDWNKDFQEFQEVLNCGINPEWLYCAKANMILEPAYTGEGKQFFSTKDIIEASKVIPFF
2529527..2529538                   attR                                                                                 N/A                 TAAAAAATATAG
