gi|00000000|ref|NC_000000|  Streptococcus thermophilus strain SMQ-301, complete genome. [asmbl_id: NC_000000].1861792, gc%: 39.07%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
35337..39062                       PHAGE_Microb_Min1_NC_009603: putative phosphoribosyl formylglycinamidine (FGAM) synthase II; SMQ301_0031; phage(gi149882852)     1.25e-40            MDKRIFVEKKADFRVKSRSLLKELQHNIQLKTLNDLRIVQVYDVFNLAEDLFARAEKYIFSEQVTDTVLDEATVKTDLEKYAFFAIESLPGQFDQRAASSQEALLLLGSSSDVTVNTAQLYLVNKDIAANELEAVKNYLLNPVDSRFKDITVGIAKQDFSESDKTIPNLDFFETYTAEDFAQYKADQGLAMEVDDLLFIQDYFKSIGRVPTETELKVLDTYWSDHCRHTTFETELKNIDFSASKFQKQLQATYDKYIAMRDELGRAEKPQTLMDMATIFGRYERANGRLDDMEVSDEINACSVEIEVDVNGVKEPWLLMFKNETHNHPTEIEPFGGAATCIGGAIRDPLSGRSYVYQAMRISGAGDITTPIAETRAGKLPQQVISKKAAHGYSSYGNQIGLATTYVREYFHPGFVAKRMELGAVVGAAPKENVVREKPEAGDVVILLGGKTGRDGIGGATGSSKVQTVESVETAGAEVQKGNAIEERKIQRLFRNGEVTRLIKKSNDFGAGGVCVAIGELADGLEIDLDKVPLKYQGLNGTEIAISESQERMAVVVRPEDVDIFVAECNKENIDAVVVATVTEKPNLVMHWNGKTIVDLERRFLDTNGVRTVVDVKVVDKDVKLPEERKTSAETLEADTLEVLADLNHASQKGLQTMFDSSVGRSTVNHPLGGRYQITPTEASVQKLPVQYGVTTTASVIAQGFNPYIAEWSPYHGAAYAVIEATARLVAVGANWSKARFSYQEYFERMDKKAERFGQPVSALLGSIEAQIQLGLPSIGGKDSMSGTFEELTVPPTLVAFGVTTADSRKVLSPEFKAAGENIYYIPGQALAQEIDFDLIKSNFAQFEAIQADHKVTAASAVKYGGVIEALALATFGNHIGATVTLENLETALTAQLGGFIFTSPEEIASVGKIGQTVADFTLAVNGVTLDGYKLDSAFQGKLEEVYPTEFAQATELEEVPAVTSDTVIKAKEVVEKPVVYIPVFPGTNSEYDSAKAFEKEGAKVNLVPFVTLNEEAIVKSVDTMVDNIEKANIIFLAGGFSAADEPDGAAKFIVNILLNEKVRAAIDSFIERGGLIIGICNGFQALVKSGLLPYGNFEDASSTSPTLFYNDANQHVAKMVETRIANTNSPWLAGVKVGDIHTIPVSHGEGKFVVTTEEFAELRDNGQIFSQYVDFEGKPSMDSKYNPNGSVNAIEGITSKNGQIIGKMGHSERFEDGLFKNIPGNKEQHLFASAVKYFTGK
39231..40670                       Amidophosphoribosyltransferase; SMQ301_0032                                          N/A                 MTYEVKSLNEECGVFGIWGHPDAAKLTYFGLYSLQHRGQEGAGILSNDAGQLKRHRDMGLLSEVFRDPANLDKLTGKAAIGHVRYATAGEASVDNIQPFMFKFHDGQLGLAHNGNLTNAVSLRRELEKNGAIFSSTSDSEILAHLIRRSHNPSFMGKVKEALNTVKGGFAYLLMIEDKLIAALDPNGFRPLSIGKMANGAIVVSSETCAFEVVGAEWIRDVNPGEVVIIDDNGITYDNYTTDTQLAVCSMEYIYFARPDSNIRGVNVHTARKRMGAQLAREFKHEADIVVGVPNSSLSAAMGFAEESGLPNEMGLIKNQYTQRTFIQPTQELREQGVRMKLSAVSGVVKGKRVVMIDDSIVRGTTSRRIVQLLKEAGATEVHVAIGSPALAYPCFYGIDIQTRKELIAANHTVGEIREIIGADSLTYLSIDGLIDSIGIDTDEPNGGLCVDYFTGKYSTPLYDYEKSYLESLEEHTSFY
40701..41720                       PHAGE_Synech_S_CAM8_NC_021530: phosphoribosylaminoimidazole synthetase; SMQ301_0033; phage(gi514050953)     2.96e-77            MSKNAYAQSGVDVEAGYEVVERIKKHVARTERAGVMGGLGGFGGMFDLSKTGVKEPVLISGTDGVGTKLMLAIKYDKHDTIGQDCVAMCVNDIIAAGAEPLYFLDYVATGKNEPAKLEQVVAGVAEGCVQSGVALIGGETAEMPGMYGEDDYDLAGFAVGVAEKSQIIDGSKVAEGDVLLGLASSGIHSNGYSLVRRVFADYTGEEVLPELEGQKLKDVLLEPTRIYVKAALPLIKEELVNGIAHITGGGFIENVPRMFSDDLAAEIDESKVPVLPIFKALEKYGEIKHEEMFEIFNMGIGLMFAVKPENVERVKELLDEPVYEIGRIVKKDGASVVIK
41720..42274                       PHAGE_Synech_S_SKS1_NC_020851: cyanobacterial phosphoribosylglycinamide formyltransferase; SMQ301_0034; phage(gi472340960)     8.75e-36            MAKRIAVFASGNGSNFQVIAEQFPVEFVFSDHRDAYVLERAKNLGVASHAFELKEFDNKEAYEEAIVKLLDEHQIDLVCLAGYMKIVGPTLLAAYEGRIINIHPAYLPEFPGAHGIEDAWNAGVDQSGVTIHWVDSGVDTGKVIKQVRVPRLEGDTLDTFETRIHETEYKLYPEVLDSLGVARK
42343..43890                       PHAGE_Prochl_P_SSM2_NC_006883: 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase; SMQ301_0035; phage(gi61806062)     3.09e-95            MTKRALISVSDKAGIVEFAQELKKLGWDIISTGGTKVTLDNAGVDTIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDLHSHLQAAKDNNIELIDLVVVNLYPFKETILKPDVTYADAVENIDIGGPSMLRSAAKNHASVTVVVDPADYAVVLDELSANGETTYETRQRLAAKVYRHTASYDALIAEYFTAQVGETKPEKLTLTYDLKQPMRYGENPQQDADFYQKGLPTAYSIASAKQLNGKELSFNNIRDADAAIRIIRDFKDRPTVVALKHMNPCGIGQADDIETAWDYAYEADPVSIFGGIVVLNREVDAATAKKMHGVFLEIIIAPSYTDEALEILTTKKKNLRILELPFDAQDASEAEAEYTGVVGGLLVQNQDVVKESPADWQVVTKRQPTDTEVTALEFAWKAVKYVKSNGIIVTNDHMTLGVGPGQTNRVASVRIAIDQAKGRLDGAVLASDAFFPFADNVEEIAKAGIKAIIQPGGSVRDQESIEAADKYGLTMIFTGVRHFRH
44062..44580                       PROPHAGE_Ralsto_GMI1000: ISRSO11-transposase ORFA protein; SMQ301_0036; phage(gi17546156)     3.48e-09            MKLTYEDKVQIYELRKHGQTFNQLSKRFGVDASGLRYMTRLIERYGIEIIKKGKHRYDSPDLKQEMIDKVLLEGRSQKSVSLDYCLSSGGMLPNWIAQYKKNGYTLLEKRGGRVPKMGRKPKKKPEEMTELERLQAENEYLRAENAILKKLRELRLRDEKEQEEKQKLFKDW
44574..44927                       PROPHAGE_Escher_MG1655: IS150 transposase B; SMQ301_0037; phage(gi16131429)          3.37e-24            MVTEFPLDILLNIIKLARSTYYYHLKKLNQVDKNQSIKVEIQAIYDEHKGNYGYRRITFELRNRGFVVNQKKVQRLMKLLGSSSQIRRKRKYSSYQGEVGKKADNLSDQGWQYQHQY
44964..45182                       PROPHAGE_Lactoc_Il1403: IS1077F transposase; SMQ301_0038; phage(gi15674057)          2.13e-21            MSRKGNSPDNGMMESFFGILKSEIFYGYEKTFNSLEQLEQTIVDYIDYYNNKRIKVKLKGLSPVQYRTKSFG
complement(45287..46126)           PHAGE_Strept_APCM01_NC_029030: tapemeasure protein; SMQ301_0039; phage(gi971767284)     2.28e-12            MKKKLLNYLILLACLATVSVSCSGSAQAAVLGDDYPFSWKYGGFGVDPWTMYWRQCTSFAAYRLSNTNGFTLPIGYGNAITWGNIARANGYRVDMNPAVGSIAWFSAGVNGAGHMGHVAWVAEVHGDQVTIEEYNYDAGQGPEKYHKRSFHKSQVSGYIHFKDLESGTQNRNPTNSSIKVGDSVRFTGTFRVTSVSGNTITSQDLAGGTPTKHNIVDPSPVLEVDAQGNPTSDQYLNPGETFTIPGNFKVLAIDPPSDGILVQIGNLKTWVTQSVLEKI

#### region 2 ####
975771..975784                     attL                                                                                 N/A                 CTTTTTCAAAAAAA
975774..975785                     attL                                                                                 N/A                 TTTCAAAAAAAT
979900..980052                     PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; SMQ301_1056; phage(gi985761236)     1.80e-05            MQAVKSLRTASSTIKGMETLRGIYKKNRRNGTLFDFSMSTEIKVLMGITA
980083..980108                     attL                                                                                 N/A                 ATTTTCAAACTTCGCAACAGAACCAT
980107..980220                     hypothetical protein; SMQ301_1057                                                    N/A                 MSSDILLDILPELYVHDFIIRLFPKFSKNLLNFILNS
980287..980862                     putative membrane protein (TMS6); SMQ301_1058                                        N/A                 MRKYMIYLSSLLVTFILSYATITWLIMPVLTRYQSLTRLINHFDYTTLTLILLLTLIIWLFGIQYHLKHFSVIYLYLAFSVYLLLLFMVLFTKTTDFQAISLNPFDFIKADTRTIQEAVLNIIYFIPLGGLYCINTDFKQFVIVSLVTLLGIEIIQFIFYLGTFAISDIILNFLGCLMGYYCCWEIKRRLS
981172..981675                     PROPHAGE_Staphy_N315: transposase; SMQ301_1059; phage(gi15927655)                    1.49e-16            MIKYDFQKPSKIPLLEQAGTPTLLRLKKRRFQCKSCRSVTVAETSIVEKNCQISNLVRQKVTQLLTEKVSLTDIARRLRVSTSTVYRKLDQFTFKKHYDKLPAVMSWDEFGFKKGELAFVAQNYETNELITILDNRRQTTIRNYFLKYPLKVPTTGTVYHNGYVWSL
981779..982282                     PROPHAGE_Staphy_N315: transposase; SMQ301_1060; phage(gi15927655)                    4.39e-08            MNQFDKKSLPYRSLKNHWRLFQKDSRKLSLNSFYSKTFRQTLAPHEVVAKILVFSKELTDYYTLYKLLLFHFQEKRVDEFFELIEENRSKVNHYFQTVFRTFLRHKQYIKNALETDYSNAKLEATNKLIKDIKRLGFGFRNFINFKKRVFITLNIHKKRTYPVLSRC
982411..983667                     PROPHAGE_Staphy_N315: transposase; SMQ301_1061; phage(gi15927655)                    3.74e-57            MRLIKNTTELIGIKDQNIIISLVFETDTHIEIQTKLDYPAPSCPHCHGKMIKYDFQKPSKIPLLEQAGTPTLLRLKKRRFQCKSCRSVTVAETSIVEKNCQISNLVRQKVTQLLTEKVSLTDIARRLRVSTSTVYRKLDQFTFKEHYDKLPAVMSWDEFGFKKGELAFVAQNYETNQLITILDNRRQTTIRNYFLKYPLKVRQQVQFITMDMSGAYIPLARKLFPNAKIVLDRFHIIQHLGRAFLKTRIAIMNQFDKKSLPYRALKNHWRLFQKDSCKLSLNSFYSKTFRQTLAPHEVVKKTLVFSKELTDYYTLYQLLLFHFQEKRVGEFFDLIEENRSKVNHYFQTVFRTFLRHKQYIQNALETDYSNAKLEATNKLIKDIKRLGFGFRNFINFKKRVFITLNIHKKRTYPVLSRC
complement(983883..984011)         hypothetical protein; SMQ301_1062                                                    N/A                 MDLGTCLIENNGESMVLGIFDAHLQFVLVDLIVAQDNMSFRF
complement(984016..985431)         Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids; SMQ301_1063     N/A                 MQIVKNYLYNAMYQVFIIIVPLLTIPYLSRILGPSGIGINSYTNSIVQYFVLFGSIGVGLYGNRQIAFVRDNQVKMSKVFYEIFILRLLTICLAYLLFVAFLTINGQYHTYYLFQSIAIVAAAFDISWFFMGIENFKVTVLRNFIVKLLALFSIFLFVKSYNDLNIYILITVLSTLIGNLTFFPTLHRYLVKVNYRELRPLKHLKQSLVMFIPQIAVQIYWILNKTMLGSLDSVRSSGFFDQSDKIVKLVLAIVTATGTVMLPRVANAFANREYSKIKEYMYAGFSFVSAISIPMMFGLIAITPKFVPLFFTSQFSDVIPVLMIESIAIIFIAWSNAIGNQYLLPTNQNKSYTVSVIIGAIVNLMLNIPLIIYLGTVGASIATVISEMSVTVYQLFIIHKQLNLHTLFSDLSKYLISGLVMFLIVFKISLLTPTSWIFILLEITVGIIIYVVLLIFLKAEIINKLKFIMHK
complement(985773..986738)         PHAGE_Staphy_phiN315_NC_004740: probable ss-1,3-N-acetylglucosaminyltransferase; SMQ301_1064; phage(gi30043988)     8.12e-11            MNPLISIIVPTYNVEKYIRTCIESILAQTYRNIEVIIVNDGSTDQSLAVISDLICSHHNVKVINQKNQGVSVARNTGIDAATGKYIIFVDPDDKIMPGFVSSLYQIADKTGADIVRGAFRDFNGNIPKGWVADFNVPTNCGTIVLDQLLSSHVHVPFVVWSSIFRLDFINSNHIRFTPGIILEDVEFTIRAYMLAKLVATSPEPNYAYRINRPGSILTTKTTKNAQKMSLSEEKIISQFISMLKHEESDVLCSLILKSIYACMRDWTGIIVRNNLSLDRNNSCFDTALTLIKEIINSRPLKEKIKFLTKVFIIKAKNPLSR
complement(987023..987400)         Tyrosine-protein kinase EpsD; SMQ301_1065                                            N/A                 MLKRKEKNITTTAPINLTTINEPMSVITEQIKTIRTNINFAATDHKLRTLMVTSAMLGEGKSTVSGNLAVEYAKEGKQVLLVDADLRRPTIHKTFGLKNHKGLSSWLANQMDDVNDAVHPVIGNL
987759..988289                     PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; SMQ301_1066; phage(gi985761246)     2.65e-60            MQEYSKVLYYLWKKKNRQSFYSWKMGETYIKIKGRWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLHKQFGEPKAIVTDKAPSLGSAFRKLQSVGLYTKTEHRTVKYLNNLIEQDHRPIKRRNKFYQSLRTASSTIKGMETLRGIYKKNRRNGTLFGFSVSTEIKVLMGIPA
988320..988345                     attR                                                                                 N/A                 ATTTTCAAACTTCGCAACAGAACCAT
988407..989045                     PHAGE_Staphy_SPbeta_like_NC_029119: transposase mutator family; SMQ301_1067; phage(gi985761243)     6.20e-25            MDTKWNKSVIVELQNITRKRFIPMTQFTTELLNFLAQKQDSDEFFRTFLETAMNDLLQAELSAFLGYEPYDKLGYNSGNSRNGSYARKFETKYGTVQLSIPRDRNGNFSPALLPAYGRRDDHLEEMVIKLYQTGVTTREISDIIERMYGHHYSPATISNISKATQENVATFHERSLEANYSVLFLDGTYLPLRRGTVSKECIHIALGITPEG
989151..989651                     PROPHAGE_Escher_CFT073: transposase; SMQ301_1068; phage(gi26246249)                  2.10e-22            MTDGFKGLEQIINQDYPLAKQQRCLIHISRNLASKVKRADRAVILEQFKTIYRAENLEMAVQALENFIAEWKPKYRKVMESLENTDNLLTFYQFPYQIWHSIYSTNLIESLNKEIKRQTKKKVLFPNEEALERYLVTLFEDYNFKQNQRIHKGFGQCADTLESLFD
989973..989984                     attR                                                                                 N/A                 TTTCAAAAAAAT
990078..990653                     putative membrane protein (TMS6); SMQ301_1069                                        N/A                 MRKYMIYLSSLLVTFILSYATITWLIMPVLTRYQSLTRLINHFDYTALTLILLLTLIIWLFGIQYHLKYFSVIYLYLTFSVYLLLLFMVLFTKTTDFKAISLNPFDFIKADPRTIQEAVLNIIYFIPLGSLYCINTNFKQFVIVSLVTLLGIETIQFIFYLGTFAISDIILNFLGCLIGYYCCWEIKRRLS
complement(990923..991678)         PROPHAGE_Lactoc_Il1403: IS1077F transposase; SMQ301_1070; phage(gi15674057)          0.0                 MKVTGFPKATYYYWVNCFERVNKDELIEKEMLKIRQEHANAGYRPMSELLKQRGYHVNHKKVQRLMKKLGLRVTSYWHKSRKYNSYKGKVGTVAKNKLHRRFRTSIPHQKITTDTTEFKYYEDGIQKKCYLNPYIDLFNSEVISYHISKHPSYQSIDIALNQALAVTSDCPYRRTFHSDQGWGYQMRDYVSKLKSHRIFQSMSRKGNCHDNSVMKNFFGLLKQEIYYGHIFSSFEELEQVIVIWIRYYNTK
complement(991675..992235)         PROPHAGE_Ralsto_GMI1000: ISRSO11-transposase ORFA protein; SMQ301_1071; phage(gi17546156)     4.60e-09            MVKYSIELKQRVIQDYLSGKGGCSTYLAKLHNVGSSSQVRRWIRNYRAEGLPKAHSKVNKNYSMELKENAVQCYLTTELSYETVARKFEITNFTLLASWVYHFKIYGEVPVSKKRGRRKKLESMASSMTQKPNDSQRIKELEQELRYAQIEVAYLKGLRRLEKNALMNKNQDSSTVSVKPSNSKKS
complement(992217..992696)         PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; SMQ301_1072; phage(gi985761246)     6.30e-46            MDETYIKIKGRWHYLYRAIDADGLTLDVWLRKKRDTQVAYAFLKRLHKQFGQPRVIVTDKVPSIGSAFRKLQRNGLYTKTEHRTVKYLNNLIEQDHRPIKRWNKFYRSLRTTSSTIKGMETIRGIYKKNRRNVTLCSDPQNIDFSNLYFGGLFLWSNIP
complement(992733..992918)         PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; SMQ301_1073; phage(gi985761246)     1.32e-20            MNHFKSKQFQQDVIIVAVGYYLRYNRSYREVQELLYDRGINVCHITIYRWVQEYSKVLYYL
complement(993003..993998)         PHAGE_Staphy_phiN315_NC_004740: probable ss-1,3-N-acetylglucosaminyltransferase; SMQ301_1074; phage(gi30043988)     3.28e-08            MKKNVLLSIIVPIYNVEKYIGSLVNSLVKQTNKNFEVIFIDDGSTDESIQILKEIMAGSEQEFSFKLLQQVNQGLSSARNIGILNATGEYIFFLDSDDEIEINFVETILTSCYKYSQPDTLIFDYSRIDEFGNALDSNYGHGSIYRQKDLCTSEQILTALSKGEIPITAWSFVTKRSVIEKHDLLFSVGKKFEDNNFTPKVFYFSKNIVVISLRLYRYRKRSGSIMSNHPEKFFSDDAIFVTYDLLDFYDQYKIRELGAVVANLVMIILASFPDSKKLYNELNPIIKKVFKDYISIEKRHTKRIKMYVKMYVFSSYVGYKLYRLVKGKHWK
994151..994720                     PHAGE_Staphy_SPbeta_like_NC_029119: transposase mutator family; SMQ301_1075; phage(gi985761243)     3.00e-25            MTQFTTELLNFLAQKQDIDEFFRTFLETAMNDLLQAELSAFLGYEPYDKLGYNSGNSRNGSYARKFETKYGTVQLSIPRDRNGNFSPALLPAYGRRDDHLEEMVIKLYQTGVTTREISDIIERMYGHHYSPATIYNISKATQENVATFHERSLEANYSVLFLDGTYLPLRRGTVSKECIHIALGITPEG
994826..995326                     PROPHAGE_Escher_CFT073: transposase; SMQ301_1076; phage(gi26246249)                  1.31e-22            MTDGFKGLEQIINQDYPLAKQQRCLIHISRNLASKVKRADRAVILEQFKTIYRAENLEMAVQALENFIAEWKPKYRKVMESLENTDNLLTFYRFPYQIWHSIYSTNLIESLNKEIKRQTKKKVLFPNEEALKRYLVTLFEDYNFKQNQRIHKGFGQCADTLESLFD
complement(995524..996735)         hypothetical protein; SMQ301_1077                                                    N/A                 MSITKIKNNIGIFIFTILVISTFATGGILSELDEIAAVCSFIILIFSFFCSCLKKKISKIFLIILLFIIFGLISNIISGIDRSVFDVLIDIVTVGKPFWIFLAMIQLVSPDTFGWLRRKFSLIIKIFILMLYIFLFLNTLHIVQMGNTFLFSQIPNFSFTFGFPVPFAIVLYCCIGFLLKNDINIVRQPWIISLIFLIIFTGKMQSYIFVVIFLGFLSIRTYREKNLKISRLILIGFIGVLISLPKLVNYFATTSYSPRKLLMTDGFGLALKYFPLGTGFATFGSVMASKDYSPLYYQLGYSNFYGMQPGGGLGSFLNDNWVASLIGQFGFLGTILFSIIIVRIYFLMIEYWGNEKIGLYLISGFTGLISIIIGSSFFTGASGALLMATFGIIVSYRKNEILP
complement(996761..997873)         PHAGE_Stygio_virus_NC_025375: hypothetical protein; SMQ301_1078; phage(gi700075118)     7.91e-05            MKILFCQTQFKMGGQQKVLLSIAKELNKKHEVTVYYENHNFFDFEDLNIIKAKRSFQVLNFFLAILICSFTLKFDKKTIIDTWHLYNARDSLRKEKYDIVVLLNPYVLFVDEFRKFIDTQKIICWTHNLFEDYMFNRFKTEQSKLKLSMSHADKIISLEKYTASKWREINKNTVVIHNPLTIKNESGYNKKNSKKIGMVTRIDINQKGLDILVKIAKLLNPSTQIFIAGSGTKSEEKKFSNLLIENKLEKQIILLGSLKGEELVEFYSSLALLLVTSRNEGFPLVVAEAMSFGTHIIGFDIPSMREVTAGGQFGTLIPFDNTELFAKNIEDLQNRFLSKDFDLESEELVRYAEKLRVNKIIKEWEEALTK
1004418..1004431                   attR                                                                                 N/A                 CTTTTTCAAAAAAA
