gi|00000000|ref|CP011264.1|  Mycoplasma mycoides subsp. mycoides strain Ben468, complete genome. 1091780, gc%: 23.93%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
463861..464643                     PROPHAGE_Escher_MG1655: IS150 transposase B; MmmBen468_0462; phage(gi16131429)       7.33e-70            MLKTHKKVKIPILLKIAKLPKSSFYEWKHKLENTIDKDKELKEMIVDIFSKSFETYGYRRLKMALKSKGYIVNHKKILRLTKELGVQCIKFRTKNGRYSSYKGTVGKIADNVLKRNFHSLQANKLWCTDVTEFKVNGQKLYLSPIIDLYNDEIISYSIQTNPNLNLTNSMLDKALKKVKNTNGLLIHSDQGFHYQHISWAKKLEENNITQSMSRKGNCLDNAIIENFFGLLKQEIYYGEKYNSVEELTKRIHKYIPTFPT
464736..465830                     transposase, IS4 family; MmmBen468_0463                                              N/A                 MKKSRNDVKRQWRTSIARVKKGEYLSIGVPRPDNKGFVYRLGYGYLHELKQYHDDPLAIIKAIIANFPLSWTKEQARTKLDEIFKEKKETKKEVLERFKGYEVVEKLFDYFNIFNDCSPTKSTTLKDVVLQLIYQRIKNPISVFNTYKTAKKEKIDTHSKNSFYRSLDYIAKNKDEILRNLNAKICANTNRKIDVLWFDATTTYFETFSREGYKKPGYSKDGKFKEDQIVIGMATDENGIPLHYKIFPGNVADPNTLIPFMLEIADIYEVNSVTIIADKGMSVNRNIRFLESKNWKYIISYRMKAGSKQFKEYILDEKDYINDGGLIYKTRDIASSYNKKRINGHFRRQIISFSQKRATKRQKR
465862..466410                     Transposase,IS1634 family; MmmBen468_0464                                            N/A                 MNKDNLVSCDDLAGSKKYRFFKPINKGAFYELDIEKIQEDQKYDGYYVYETNRTDLSVKEVINLYSKQWQIESNFKTLKGKLSLRPMYLSTWNHIVGYICLCFISLVFLNYIIYILNSKLGLTGKSKITEHKVINVIKEVKEIEVFVNKQKIETIQVYNDELQESWQTYQILLELLTKEKVT
466461..466796                     PROPHAGE_Lactoc_Il1403: IS1077F transposase; MmmBen468_0465; phage(gi15674057)       4.36e-08            MFSCFMLKLGNVGKTHKKVKIPILLKIAKLPKSSFYEWKHKLENTIDKDKELKEMIVDIFSKSFETYGYRRLKMALKSKEYIVNHKKILRLTKELGVQCIKFRTKNGRYSS
467000..467353                     PROPHAGE_Ralsto_GMI1000: isrso11-transposase orfb protein; MmmBen468_0466; phage(gi17546155)     1.22e-34            MLDKALKKVKNTNGLLIHSDQGFHYQHISWAKKLEENNITQSMSRKGNCLDNAIIENFFGLLKQEIYYGEKYNSVEELTKRIHKYIYWYNNIRIKEKLKGLSPVQFRKQSCYNIEKF
complement(467361..467804)         PHAGE_Staphy_StB27_NC_019914: Holliday junction-specific endonuclease RecU; MmmBen468_0467; phage(gi431809702)     4.31e-12            MHPLKNKGQYLETILNITNQKYLDENLCVVSKIPTNINLININNKVITNATFKDNFNCDYIGVYNGLYFEFDAKETSKDEFNFNAIRKNQQQKLNLVSKNKGLAFIILYFSKYDDFYIISYNKLIEYIKNNKKTIPRSWITKNPPLP
467867..468244                     hypothetical protein; MmmBen468_0468                                                 N/A                 MKKLSVNQIQNKKFNIAYKGYKIEEVNDFLDEIIKDYVVLENQIASLNEQLDLANQKLTKLSADKQKVENELEQYAKKNWKLVKDNLNDIDLIKRIARIEKNLVGYEEKLNKIDEIYKLLISKSR
468439..469869                     PHAGE_Pseudo_OBP_NC_016571: hypothetical protein; MmmBen468_0469; phage(gi371671514)     1.10e-36            MISTTGFLVVACNNTNNNPVKSEVIINNKQAVIDLWNKEFKNKLDSAKNTSLIVEMPKEKLPKKISDSIDLNGSLYENTVEKLTKDENNKLNQKVKILVNKDVIGLEVGSVKYGQQSIKYKTKDGKIVEKNKDEWEKMVWKDPSKKRQKQEISDIDEVIQMGYYDDEGDNYLKPFNKNIHYVQAFEMPTNISKISALLPREVNSLSKVFNQITSTNVGGIEKWDVSRVCRMSFLFDGAKNFNYDISNWDVKILRDANSMFADNAKFNQNLGKWKPYNLAFARKMFARAKVFNQDLSSWQTSHVYNMEQMFDGAEKFNSNLDKWDTSHVQTMKSMFSGAKMFNGNISSWNTSKVEDMTSMFRKTGEFNQDISKWKTNSVKKMNYMFSEAKMFNQDISKWDVSNVDEMNFMFNKASSFDQNLSEWKVKEKVKHSSFVTGSKIESQSSKLPKFKDSSSSTPTPTSTPASTPASAKSKMK
469972..471195                     PHAGE_Pseudo_OBP_NC_016571: hypothetical protein; MmmBen468_0470; phage(gi371671514)     5.46e-29            MKKILIFLNSLLVISLTSLVISCYQLDTQTLEMLSTKIKDELNEVDLKITNLQKENNSLESQIQELKNIEKISYKFEPFTRLYDKANGYRYKASKINLPIKNQYFKTKIQLNKFKNNQQVKVLLNDIQIKENQILNQEKINYQLKQNIEDTKEDLSKFWGYGIDPVYNKNQLVKIGYFLTRDFEIQIEKIKPETNQVPDHLPKEITSLKLAFQQNINSKIKGIENWKTDNIKNMSEMFEKAKNFNQDISNWNTSNVIKFNSIFNEAEQFNQNLSSWKTNNAINMDSMFVDAKNFNNNNQKLVWNTKNVTNMRSMFLGASMFNQDISKWDVSNVTDMSNMFFRATSFNQNISNWNVLNVNNMSKMFFNASSFDQDLSKWKVNKNVVFDDFAFRSKIDNDNKKLPNFNN
471662..472132                     competence/damage-inducible protein CinA C-terminal domain protein; MmmBen468_0471     N/A                 MSLKKIVKLLIKANLTISTCESFTGGLFSNLITNIKNSSKIFYGSFVCYQTMFKENILNIDKQVIKKDGVISFECAKEMLIKTYELTKTNIVVSFTGNAGPNSMENKPVGLAYIGVFYNNDIKVFEFKPKFVVSRKFFKKRAIKFIVKKIKQMVLF
472171..473208                     PROPHAGE_Escher_MG1655: DNA strand exchange and recombination protein with protease and nuclease activity; MmmBen468_0472; phage(gi16130606)     9.79e-128           MSTEIQKIEDNNLKESQMWNSKELKEAIKEIEKMFGKGSIMVLGQSDNLNVETFSSGSLLLDNALGIGGYPKGRIIEIYGPESSGKTTLSLHAICEIQKLGGIAAFIDAEHSLDPKYCHNLGIDTNKLLVSQPDNGEQALDILEMLINSNSIDLIIVDSVAALVPKTELEGEMSDQSIGLQARMMSKALRKLNGLIAKSNTTVIFINQLREKIGVIFGNPETTTGGKALKFFSSIRLEVRKSENILSNSEIIGNKIKIKIVKNKTAIPFKTATISLLYNKGIDKIGELVDLLVSYEIVEKSGVWYSYQNEKIGQGKTSVIQWLNADEKRTNELIQQVKKIIEQKE

#### region 2 ####
complement(882449..883747)         PHAGE_Gordon_Ghobes_NC_031028: hypothetical protein; MmmBen468_0856; phage(gi100036)     7.92e-21            MISRYQVKEITDIWSDQNKYNTWLKIEQLVTNGWAKIIKINKDDLFKINNDLKVDLNRMLEIEQETKHDVVAFTRMLSEQLDNESKWIHLGITSTDIVDTAQNYLIKQSNQIVFNELENILKTLKTLAIEHKNTLIMGRTHGMYGEPTSLGLKFCLWYDEFLRHIKRFELARNDIEVVKISGSMGNYANLDPQIELYVANKLNMNIDSLSTQVSQRDRHIFLVEVLANIASTLEKISTEIRLFQRSDVNELAEGFLKNQKGSSSMPHKKNPISSENVAGLSRYIKSIVHIVLENNNLWHERDISHSSNERIYLPDIFNLIVYILKRMNETLTNLVINKTQMLEHIKQAKNIYFSQRVLTFILLEQPNVTRDQVYDLIQQITFKCSKNNLDFKTEVLNSKLTEFVLIDKLEQLFDDQFFLRHVDYIFNRVFNK
complement(883740..885038)         PHAGE_Mycoba_Cali_NC_011271: gp254; MmmBen468_0857; phage(gi204305879)               5.08e-22            MKNNYKSLVIVGSQWGDEGKGKITDYFSQKADVVVRFAGGDNAGHMIEFNNKRHKVTIIPSGVFNPKVKNIIGNGTVINLKSLVNEIKRLNESNISTDNVFVSDRAHLIFDWHALIDQLQEENRKENKIGTTKRGIGPTYADKAARYGIRICDFQNPNFKEILKENLDYHNQIITKVYNHEPLDFDVIYNESMTNYQFIKNNIIDSGYEVSNLINENKFVLFEGAQGVLLDIDHGTYPFVTSSNCSANNASIGTGIHNKQINKVLGIVKAYNTRVGSGAMVSEIKTELAHKLRERGREYGLNTGRPRRIGWLDLVALKYAIRVGGIDQLFLTLFDVLDTETKIKICTHYKLDGKIIDWFPASDYELKRCEPVYEELDGWNQDITKVTSFEELPINAQKYIKRIEEIVKVPFLGFSVGSDRKQTILIKGEFDD
885233..885775                     PROPHAGE_Escher_MG1655: IS150 transposase A; MmmBen468_0858; phage(gi16131428)       1.13e-08            MSKLNLEKKLKIVKEAKKLNIKKSTYLANKYDISVDTVESLVNRFEAFGIEGLINKEKKPYYSAKLKLKIVLYKLETNHSYDEVAKKFNIIYSSTIAGWVKKYREYGFLGLNNNIGRPKKIMKNPNKKPAKIKKSQVKINNEQQIKELKEQVEYYKLEAEFWKKFHTLLTKEKSTRKKQK
885784..886644                     PROPHAGE_Escher_MG1655: IS150 transposase B; MmmBen468_0859; phage(gi16131429)       1.71e-79            MLKTHKKVKIPILLKIAKLPKSSFYEWKHKLENTIDKDKELKEMIVDIFSKSFETYGYRRLKMALKSKGYIVNHKKILRLTKELGVQCIKFRTKNGRYSSYKGTVGKIADNVLKRNFHSLQANKLWCTDVTEFKVNGQKLYLSPIIDLYNDEIISYSIQTNPNLNLTNSMLDKALKKVKNTNGLLIHSDQGFHYQHISWAKKLEENNITQSMSRKGNCLDNAIIENFFGLLKQEIYYGEKYNSVEELTKRIHKYIYWYNNIRIKEKLKGLSPVQFRKQSCYNIEKF
complement(886743..888905)         PHAGE_Lactoc_phiL47_NC_023574: ribonucleotide-diphosphate reductase subunit alpha; MmmBen468_0860; phage(gi589890883)     0.0                 MNENKNTIVLDDVDDEYIKLNARSKIFLKDQDNFQLDVKAAELYLKNYIEPRMKKFSSLKERLDYLLENQYYDSEILNKYSFDQISQLNHYAYSFNHHFPSFMGALKFFNAYGLKTFDTTMYLETYTDRVLMNALFLGNGNFNKAKDLLKDMMLGRFQPATPTFLNAAKKHRGEYVSCYLLRTEDNMESICRTISTSLQLSKRGGGVAICLTNLRETGSPIKNISGLSSGPIPVMKILEDSFTYADQLGQRQGAGAVYISAHHPDIISVLDTKRENADEKIRIKSLSLGLVIPDITFELARDNKDMALFSPYDVQKTYGKPLSDISITEKYYEMLENPNIKKTYISARKFFLTVAELHFESGYPYILFEDTVNRRNAHDKKGRIIMSNLCSEIVQVSTASEYNSDLSFIKTGEDICCNLGSLNIDKMMKSGKEFSDSIYNAISALDIVSRNSDLSASPSIQKGNALNHAVGLGAMNLHGFLAINKIMYDSPEAVDFTNMFFYTVAYNAFKASNKLAQEFEKFASFDQSRFADGSWFDKYTKCEFDKWTPQTNRVKELFKDYDVQIPSQADWIQLVEEIKKTGLANSHLMAVAPTGSISYLSSCTPSLQPVVSTVEVRKEGKLGRVYVPAYQINFDNMGYYAMGAYELGPDPIINIVAAAQQHVDQAISLTLFMTDKATTRDLNKAYVNAFKQGCSSIYYVRIRQDVLEDSENYECDACKI
complement(888892..889365)         PHAGE_Bacill_SPG24_NC_030903: hypothetical protein; MmmBen468_0861; phage(gi100023)     3.17e-14            MHSNVKKVTDKDVIKPVGIPFVVYFSSISNNTHRFIQKLEIENIRIPYELDQSISVNRDYVLVTPTYSGGGEYVEGAVPKQVIKFLNNKENRSFCRGVISSGNTNFGDTFGIAGPIISKKLNVPFLYQFELLGTQHDVSQIKQILFRFWEDGNNERK
complement(889374..890393)         PHAGE_Mycoba_Myrna_NC_011273: gp256; MmmBen468_0862; phage(gi203454817)              5.87e-125           MAKEQKYYHESVSPIEFVKNNFKGNLRSVNWNVINDEKDLEVWNRITQNFWLPEKIPVSNDLSSWRSLSSEWQQLVTRTFTGLTLLDTVQATVGDVAQIEHSLTDHEQVIYSNFAFMVGVHARSYGTIFSTLCSSEQIEEAHEWVVKTETLQKRAKALIPYYTGTDPLKSKVAAALMPGFLLYGGFYLPFYLSARGKLPNTSDIIRLILRDKVIHNYYSGYKYQKKVAKLPVEKQTEMKEFVFKLLYELIDLETAYLKELYAGFDIVDDAIRFSVYNAGKFLQNLGYDSPFSEEETRIEPEIFNQLSARADENHDFFSGNGSSYVMGVSVETEDEDWEF
890695..890979                     preprotein translocase subunit SecG; MmmBen468_0863                                  N/A                 MINLLASTTKLAQQLILGFEIFIFIIAFIMIAIGLLQNKQSQTGLSALNGGNEELFSNSKERGLDKTLSIWMLVLGIIFFIIALTISIITNTML
891015..893129                     PHAGE_Lactoc_Q54_NC_008364: putative ribonuclease; MmmBen468_0864; phage(gi115304286)     1.44e-70            MESKIIEVLKTNKHKVSLNKLLTYFNALDYSLIKNYLDQLEKNNKITISLENNIYLLDQIYKKGTIKLNPKGFGFINDINKIDGEDHFIARVDLNNSIHQDEVVYILKQEEDNRLKAIVIELIKRNKIYLIGEINRSFDKRFLDFIPNDKSFDSFRFVIVNKNEFKYEEFNIIKAKIISCKERKIFIRLIKIIGNSKKASDRILAIAEEFEIKTSFDKQTLDNAKQINLSTDKLEKEFLKRQNNSLVNKTIVTIDGIDSKDLDDAICVEKLKNNNYKLFVAIADVSYFVRYKTALDKEALLRGNSTYLANKVIPMLPNILSDDLCSLNPNTKKLVFVCEMEFDNNANMLNKKVYESVIISKARLNYDEVNNYFKTKTWTHCEQTKKMLDVAYELYKKLEDLKAKKGTISFDVREPKIILDKNLNVIDIKTKTADQAEKLIEQFMVSCNEAVAELIYQKDLPFLYRNHNKPDEDELINWYKSLKTFGINPKLTNKQVLDPIFINHTLTQIKEQIKDETEVELLNISLLRYMDKAKYGLENIGHFGLASDCYTHFTSPIRRYSDLLVHRYLKQYLITKDLEKTSLENNTNYINKVSNIINDTETKSVECEREVIKACMCEYMLNKINTTYTATISAVLKFGIFIQLDNLVEGLVHISNMNSDLVYDETNRILIKPDNTYYRIGQKVKVKLISVDIKKRTIDFVLIE
893139..893585                     PHAGE_Staphy_StauST398_5_NC_023500: SsrA-binding protein; MmmBen468_0865; phage(gi588498309)     3.51e-29            MSEHLIVKNKKAYFNYEIIQTYQAGIVLNGPEIKSIRNHDVSINEAFVLIRKKEIYILNMNVKKYQFANYIKGLEETRTRKLLLHKKEIIKILNKIKQENLTIIPVKLYFKNDYVKLEIALAKGKKLHDKRQTIKKRDTERKELKNYK
