gi|00000000|ref|CP011272.1|  Pirellula sp. SH-Sr6A, complete genome. 6534136, gc%: 54.25%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
538932..539141                     PHAGE_Mycoba_MosMoris_NC_024138: hypothetical protein; VN12_01945; phage(gi640884190)     4.85e-07            MPLQTKNDCFLTTAEAADYLGFAEDTVRRYVYRGLIEAQKLGKNLVVLRSECDRYMTEKRGPGRPKENP
539295..539765                     hypothetical protein; VN12_01950                                                     N/A                 MDLFEFAERAQEATAVSVLARRSDPQTSHDAADEIADKLNVRCRQFLSTIRVLGIATANEVAVHFAGSNIGLIGSIRRRASDLCAMGLIRIVGRRKCNVTGKSVHAYDVASPFSSVIISELERERIPEFEAAGYRVASIIPNHFGSESGILLMRRS
539942..540133                     PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909: prohead core protein protease; VN12_01955; phage(gi100061)     1.39e-11            MLILSRKVGEVIRISDDVFVEVVAVRGGKVRLAVTAPKDIPIFRQEVYQKKQKAKELASNGAV
540120..540473                     hypothetical protein; VN12_01960                                                     N/A                 MGLFNFLEPEIFYFYIRVTRYFGVARAPLHVPLNEIHDAEVIGKYSETIERYEIVERHSRLSKQHSIELYRKQLEDAAIKEFSGNISVLTCLSDQSGYMHYCEKAIELEALVESRCK
540464..540754                     hypothetical protein; VN12_01965                                                     N/A                 MQMMNIDLELLRRIKQLYHDGLTKDELRAMGFKGTLVYKAIEQYERSKRLPDEKTPSKRCKQCGHKSYEPCFVNGVCQGCHTRKIVNEQWKGRFRV
540751..541074                     hypothetical protein; VN12_01970                                                     N/A                 MSIKRVNPYSKASDRAVQIRTLLRQGATAKQIAEMDFPAFEIIKVQRQLRIESEKKPKNNEKREPKDVQRCTECGCLADKKTIEFGECKGCICRAKTNFVRKGRFRV
541071..541301                     hypothetical protein; VN12_01975                                                     N/A                 MTIRPFPTEFWVARDGAVWYVERYDPYLRKLVIVSESGVESERNKDGTVGGGRSYDDLTQELIGCTSFPLRKKAVR
541298..542128                     PHAGE_Cyanop_KBS_S_2A_NC_020854: exonuclease; VN12_01980; phage(gi472341475)         8.22e-39            MKSDAEYHADTSRISNSMMSLLKRSPRLFYQRYILGEAEEPTDAMRFGSYLHTLVLEPEEIPNRYYIAPKVDRRTKEGKAAWAQSQELAIGKELVTEADAQLASLCASSILWHQDFKLFAKLITESVIEERIDFTFANYDCRCKPDMVHVGSRLCFDIKTAKGASPAAFSKSVAEYGYHRQAAFYRHALQEKYGEYFRFLFVVVETSAPFESAIYELDFDAIEKGEQELETLIAEYRVRLANDDWSPEFSKGINTLSLPRWYQSGIYQYEGEQVSE
542121..542912                     PHAGE_Mycoba_Babsiella_NC_023697: gp48; VN12_01985; phage(gi593775200)               1.59e-48            MSEATKEAKPETAIAKKPNGIKDWLKSDALKTQIASVAPKHMAPERVMRIALNAVSRTPKLADCTPESFMRCLLDLSSWGLVPDGRHAHLIPYGTECTLVLDYKGLVTLAYRSGWVKKIHADVVFEGDIFVYSLGTVCQHIPWEFRDDANKPEHKGHFRAAYCVVTMADGIEKHEVMTASEIDAIKAKSRSGNSGPWKDHYTEMAKKTVYRRASKWLPLSPEQADAMERDDDRIIDAVSVAVTQRLSKAAMPLIGANETGDTE
542915..543313                     hypothetical protein; VN12_01990                                                     N/A                 MKTPTKQQLQVMLDAKEKICDEWADKYQQLANDFDIAIRNLSLCESKVKRQDELLDQLRTKADKERVRLNSRLSCISMIIESHLLTHHNTGTDEKVIYDGALGRGIEEITTEEVRFLRYIRDRIMADVEVPF
543313..543546                     hypothetical protein; VN12_01995                                                     N/A                 MTDDLLQFVRGAQPSSIYELAGELAMLGESGAAWPRASAEHWRRELQSLIDSGKLVEVGGNISVAVTAKPMQGTLFD
543705..544790                     PHAGE_Xantho_CP2_NC_020205: hypothetical protein; VN12_02000; phage(gi448245209)     8.68e-06            MATVVETKQELIVSGSVPVLYRVSDAKIDEIRAEFTGIKILDSKDYERCTKAIAVCRTLRTDVEKCRKELKEDALEYGRRVDAEAKRLTKRLEEIEEPLKAEKSRVDEEKERVKREAEEAKRKKIDARLELLASVNSRINPMVVSDWSDEEFDSHFAAAKQAWEESKRLEQQEAERKAKEEAERREAMRIEEERLATERAELDRQRKEADEAARIERERIEAEQAIERQRLAEERAKIEEAQRIEREKLEAERAAIQAEKDRLDREQWEREEADRAIKQRLWEEEERKEQERLDAIEAAEQAKRIEEMKPDREKMIRFGTFLEELELPSLSTDEGARHYESLRRLIGIAAEFCKTCFDETQ
544787..544984                     hypothetical protein; VN12_02005                                                     N/A                 MTDTDIIELFRERVAIMVIDGGVNEAEANKVAFYETARLVGVEPRAMPQVCKQEMKEAVSKLTKV
544981..546462                     PHAGE_Mycoba_Estave1_NC_026585: helicase; VN12_02010; phage(gi764159523)             2.86e-64            MIIDFKYDSTDSYRTFLKVRQCPVYRFKGTSAFVPDEYSSAFGYSSIDANIDYQPSSFLFDYQKDIARIAIQKRKFAIFADCGLGKTFMLLEFARHAAKSSDGKVLIVSPLMVCKQTMDEAAKWYPDLRVGVIPSSNLNHWMNTTVEHECQIGLTNYEAIREGLIAGQLKGLILDESSMLKSHYGAWGLRLIELGRGLQWKLCATGTPAPNDRIEFANHAVFLDRAKTVNEFLASYFINRGETQNRWELKPHALKPFYRNLADWSIFLTNPATYGWKDNVGVTPPIHVHIEHVDLTDDQRQAAQQLTGNLLTTSVGGIGERGKLSQIAKGKGGMATNKPSFIKSMVESWPDESAIIWCNYNEEQESLERVFPDAVSISGDTPEHKRQEYVDRFKSGDAKVLISKPKILGFGLNLQICTRQIFSGLKDSYEEYYQAVKRSNRIGSTRPLHVHIPVTELEMPFVENVLRKAGRVESDTREQEELFREVGHACFQR
546443..547354                     PHAGE_Mycoba_Estave1_NC_026585: DNA methylase; VN12_02015; phage(gi764159524)        8.21e-67            MPVFNDKEWEVHNGDCIPHMLDDMPPESIDFAVFSPPFPSLYAYTDSVSDIGNVDAMDNEARVHLSFFFRGLSRVLKPGRAAIVHVCQIPRMKRSGGVGLCDFRGINIRLGERAGLIYEYDWSVRKNPQAQAIRTRSRELQFAGLESDRSAQRGTLQDYLIKFRKPGENAVKINAKDQVSRNDWIKWAEGCWDDIHETDTLNTAAAKSEDDTKHICPLQLEVIRRCVLLFSNPDEVVFSPFTGIGSEGFVSVGGKSPKTKLSIRDPRRFYGCELKPEYYKQACKNITSAVKNRTPEHDQALLF
547468..547620                     hypothetical protein; VN12_02020                                                     N/A                 MNNVFDLECEFGVIDARCECDVCRLQREETDVRRQAVLRELADVQEGMEA
547623..548381                     PHAGE_Xantho_CP2_NC_020205: hypothetical protein; VN12_02025; phage(gi448245213)     1.06e-18            MSFQWVKVEKVTARKPEVLRIASKLNLHLDHAFGLCVRFWIWCDDNLETGSAIGVTPVALDALLNCDGFAQTLIEVGWLRVRNGSLEVPNYDRHLSENAKKRAHSQERMQVYRKKASQKCSAKSVTTASPEIEIEIDRRKEEKEEVYRSEETELLTIWNDRMRRKDRLTDKRRKAFRARLEDRWWLDNWRESIERAVEMPFLNGDNDRGWRADLDWFLKPDSVTKIMEGKYESKTPVGVVYDPLAEYEDLDA
548374..549681                     PHAGE_Arthro_vB_ArS_ArV2_NC_022972: DNA helicase; VN12_02030; phage(gi563398172)     3.37e-38            MLSIPETRDTETTRAERALVGLMIIHPSIIDRCEIELHDYRCVDSDASQIWPVLCELRRGNFPMADLTSLAVEVRKRGIAPASLARVANEAGLPSNENFYIHTLTKQRRKRRLLKLAADALEKLDREDCDVDSVADSLSSGLASIPQLSKRKSRAGDIMMDVLALSEETQQPVRKVFSGISTLDLKMGGFRDGQLIVLAARPSVGKSALAAQMAINAAKDGAKTLFISLEMSAQETVARAMAFETGINMQHILDGTLQIGDVNRLKGLATAYQNEIPLYVEDRSNLTMHRLEMLVKQYSAKQRLGFVVVDYIGLVSSDDSRKSAWEVTEKVSKGLKQLAKSEKVPILALSQLNRDSEKEKQIAIPTLAQLRNSGSVEQDADAVLLLHRESRQSKDATLILAKGRNCGTGKLSLEYNGPKYEFIPAMVDNEFSKDF
549682..550002                     PHAGE_Mycoba_bron_NC_014461: gp76; VN12_02035; phage(gi304361021)                    7.65e-05            MGVRHAKVGPRVADRIAYLERIAGDESLATRKGPAFSSRVRITIVSYLARLRDADGTSGKAAIDGLVHAGVIADDSPKYVEEVCYRQVKVKTKAEQKTQIIIEAVD

#### region 2 ####
1037656..1037667                   attL                                                                                 N/A                 CGACAAGATTCG
1037881..1038897                   PROPHAGE_Xantho_33913: phage-related integrase; VN12_04055; phage(gi77747810)        2.49e-08            MRKPFFRKARNCWFVKDDLGRFIRLDPDETKAHTLWLRMVEAAAYKEPNATFYACAQAWLREYEAEASPDAFKLAVATLKDFCEYLPDSFRAVDVDPISLHGWAKGKRWSMSTRRDRLRTVKRVMKWAFTRGWIPKDLVSDMKLRSSPPRIHLVTQEQFAAVIADCKRWKRARPYIPLMIALYHLGSRPQAVRIVKASDVSACGRFWILKRHKTAEKTNRPQQIALSPCLQTLTRILMARRSSFLFVNANGDPWSKNAVGLRMRKIRKRLGIPNLMPYNLRHTFATDALLAGQDIATVAALMGHTSTEMVSRYYGHLDQHKGHLADNAAKIAAARSQK
complement(1038888..1039163)       Helix-turn-helix domain protein; VN12_04060                                          N/A                 MDHQQGATIVTRLDDLPDVLTPKQVAEYLQISHDAVRALLRSGRLRGVNAGAKQSKYWRITKEAIREFTSTTEPAQGMKKPNKSSVVKTYF
complement(1039133..1039966)       PHAGE_Brevib_Davies_NC_022980: site-specific DNA methylase; VN12_04065; phage(gi609217277)     4.49e-07            MALSTKSCLSYFGSDSEVAASLAALLGDCSHITIPFVGGASILPHLRARSLICNDRNGLAINFYRALGGVYGDDVSEQLRQRCQLTLSHPDEMERAASILEDWSESRALESLSIIESAWAYWALCWIGRKGKGGTKHLGGMPSVRRTANGGSNATRIAAAARDLNDWAKHFRRCEWTDEDFRDCLSKVKDDRKTGVYCDPPWTGAGRNYLHNFTHNDHIDLQSLLAQLLDSTVVVRYGDDPMIRDLYKDWHIIQASSRTQSNSVKDELWIINKEPRS
1040146..1040463                   hypothetical protein; VN12_04070                                                     N/A                 MFEVTATHSDGRQRKKIVFTMDRARHLAHQALEKQWKVQITQLYADVWIVDHRTGHIMLFRSRVSHAEACKRTRHYMRIDQDRGCVMWPHGKPIPKGWRVVKVDS
complement(1040471..1041127)       hypothetical protein; VN12_04075                                                     N/A                 MSNTPRKPLIDQRKLEAYSGSPGSIPPKQTIEDRSWMVQRVHGDTYGPYTQNELENYATQGRIDLTSMVLHPRITKNQWIAVGRIAKLRELILQSTRANAEVNASRAQETSTSKGDSFSTASSVTILISGVSNIILAIFWMVFIITIPISIALVVLAIFEFMFYSGRDDMTRAKFRSSATTLGVCGIVCGLFNTISLVCGIITLANLPKKTSRKRVVL
complement(1041124..1041537)       hypothetical protein; VN12_04080                                                     N/A                 MDAKEIAKRLATIVAELEQIQKSLDAAPVKKLKDVEAYAKAGLCLYCDQPLDDGTGIRTIRGIHQRCYKKVERSQYSMQFHEDSGLIGPPAISGRKGDDKAAQLAKRLESEMMSRDAAEMKAKIDAMTKPNKKSPKK
1041716..1042012                   hypothetical protein; VN12_04085                                                     N/A                 MRIQTFVMGFVDMKRAAIQRVAKCQAEGLCLSCLEPLDPGKTVVRGCHMRCAKATYRMIADGRLTDEQQVQAGEWLPASKGGRKPTLAVSKKASALAT
1042069..1042137                   tRNA                                                                                 N/A                 GGTGGGGTAGCTCAATGGAAGAGCATCGGGGAAACCCGAGACAGGTGGTTCGATTCCGCCACCCACCTC
1042221..1042421                   PHAGE_Vibrio_VvAW1_NC_020488: RNA-binding regulator protein; VN12_04095; phage(gi460042914)     2.15e-09            MCVMLVLSRHKDERVVIGDGLIEVVVVEIRGDKVRLGFNAPKDISVHRKEVQDSIDREGKRSTNDD
1042414..1042755                   hypothetical protein; VN12_04100                                                     N/A                 MTDDDEDYIYVSIRIVREFGKAPLESDWYADDQCDAATIGYFREVITDVRKVRRLSYPKAKHVELIHREAADLCERLYPGNTRCDVRLADRSAFDRYQHQLASFEQEMNEVLR
1042752..1043045                   hypothetical protein; VN12_04105                                                     N/A                 MITLARFNQKKLDIVKSLLADGVDDATIRAAGYSKSYIAEAVRQNKPAKCFHNASEPKKRCKCGALVYESTVDFRGYCYACNMRLSANIQRDWRRQV
1043042..1043311                   hypothetical protein; VN12_04110                                                     N/A                 MKPQPGQYWKMRCGTIVYIIGVAPMLYLPLISVDSTGFFHRHLEDGTAHSFLHRDSVEDLVEHLPDYPGFPFPPDAFQAPLVKAEEVAA
1043308..1044165                   PHAGE_Synech_S_CBS1_NC_016164: exonuclease VIII; VN12_04115; phage(gi356870827)      6.24e-23            MSKESNLQYHSDLSRVSNTMLTTLKRSPKEFQERYITQNWVEKDQKAFRIGNMVHCLSLEPLEFDARYIAAEKHDRRTNVGKDAWTEFVKRAGDRQVVDPEEAELAMVCARNLIRHPDFGDFFAYRRNSAVIEERINFTLHGVDCRCKPDMLIPELGLILDVKTTADASPEAFARSVAKWGYARQHAFYCEGARQKYGIDFRFLLCVVSTNRPHETACYELSPASIDIANVELAALLDDYKRRRDSNDWLSTWSRGIVSLDLPRYYNANILVDSDEEETELEVAA
1044177..1045031                   PHAGE_Clostr_phiCT453B_NC_029004: hypothetical protein; VN12_04120; phage(gi100009)     2.45e-82            MNPYGQTEEKEEPAAMVVATQAREVAEIQAAMAIAKKFPRNEKACADRIILACQRNSLAESATYEYSKGGTAITGPSIRLAEAMAMAWGNMQFGVRELEQRHGESTVEAFAIDLENNVRCVKVFQVRHHRDTKSGGYTIKDQREIYELVANQGSRRVRACILALIPGDVVEAAVDQCDKTLSEHCDMSTDNIKKMVDAFSALGVTKEMIESRIQRSIDAITKANVIGLRKVYNSIKDGMSSAKEWFPVPDEKTGTQTVKKNAPIQSAGSSTAANSTGENAAEKK
1045028..1045234                   hypothetical protein; VN12_04125                                                     N/A                 MTEPHVYRGFFVCPTRVGPYTIEWWHPDYDGASDSKDRRAGFATSESDAMNQIDRVLGEQGNAHVSNN
1045218..1046315                   PHAGE_Vibrio_VvAW1_NC_020488: hypothetical protein; VN12_04130; phage(gi460042916)     1.53e-07            MSATIEQPNEVSGQLITGGKTPILYRVSDAKIDEIRAEFTGIKILDNKDYERCTKAIAVCRTLRTDVEKCRKELKEEALEYGRRVDSEAKRLTKRLEEIEEPLKAEKARVDEEKERAKREAEEAKRKKLEARLELLVSVNSRINPMVVSEWSDEEFDSHFAAAKQAWEEAKRLEQQEAERKAKEEAERREAMRIEEARLAAERAELDRQRKEAEEAARIERERIEAERAIERQRLAEERAKIEEAQRIEREKLEAERVAIEAERDRLEREQRQREEAERAIRQRIWEEKERKEQERLDAIEAAERAKRIEEMKPDREKMIRFGTFLEELELPSLSTEEGARHFESLRRLIGIAAEFCKNCFEEDQ
1046318..1046641                   hypothetical protein; VN12_04135                                                     N/A                 MAYSKLARTSDPMTSHDAAAGIGLKLTARAQQFLAGLEKLGQATANEVAVSVAGGNIGLVGSIRRRASDLDELGLIRVCGRRVCSVTGKPVSCYEIVPQKKTQLELF
1046644..1046880                   hypothetical protein; VN12_04140                                                     N/A                 MEADLVEFLRKVAPIHIFEAAGELHALSQNGANWPRASAEHWKRELEKLVKDGTLDEVDGMLSIAKVKRDAPRQGTLF
1046893..1047528                   hypothetical protein; VN12_04145                                                     N/A                 MSTEVVDPPDDVEDTATEEAVEDQPGFVSVGKLEYDAMKANAEYLQAIADAEEACNEAELVYANAKREADKAKKAFEHKVGDLRELIRTGPKKPNPQMLLPGLDGEQQPDDSYLDESIFTVLELTDKQKEKLEECGVKTVRDFEKLRSGALEDYPKGLRSIRGVGETTADKWENEILAFITKNTPMQSIAIGIAEDTTSNWEEPEEDWEDQ
1047555..1047629                   tRNA                                                                                 N/A                 CGCGTCGTGGTGTAATCCAGGAAACACGCTCTCAATGAATGAGGGAATAGTGGGTTCAAATCCCACCGGCGCGGC
1047675..1048520                   PHAGE_Paenib_Harrison_NC_028746: primosome; VN12_04155; phage(gi971482375)           1.99e-06            MKHQTPTLLKFKKLKRRLGLTKDRDVMGLLESLWILAQRSAPCGDIGNQLDNEELAIELEWEGDPDELVSALVDTKWLDACEVHRLIIHDWPSHAPRYIHGIAAKRGGFATPTIIGDCSRGLSNQEMAEAENDHSGTVVEDYSPPLNASSSPTTVDDCTRQQPNLTKPNLTKPNERERTHTLANSRSEKFDQAWNRWRAHRNENFQRLTPTSEDAALMELARCFPDDEESQIAAIEFSILRGAKNLITNGDHRVKASPRDSPSPEDRTARRTHLLSEIGKV
1048517..1049005                   hypothetical protein; VN12_04160                                                     N/A                 MNQQEISEFWGQVFINFPSLEEWINTKSPDPPKTIASWSRAWENITAKEAMSVLNRWVTGEIDPPTGYQRETFHIHLRQVVMSDRAKLSGARAREEAFEKANIGAARPKIMVSCSAVMDKIIALKSQYEAGFISMDELERERDLIVREAHEEIDNNAKRKAV
1049005..1049250                   hypothetical protein; VN12_04165                                                     N/A                 MNRQARVSQSNQWNDYGNVGLIKAAEAEAIAAAKFCMSVEEVDWVVFVRDADDPEIPEQSMTVTTRLSTTVKNSRSIENDD
1049240..1049737                   PHAGE_Pseudo_phi297_NC_016762: holliday junction resolvase; VN12_04170; phage(gi374531280)     6.83e-15            MMISFEVPGVPNSQPRQRHRMQSTKAGKTFIQNYTPQDSPVNSYKAVVRLCCRSAMRDKKLIEGPIEMQLVFIFPRSKSQHWKNKPMHRIEHTKKPDLDNLEKAILDALNGVAWVDDSQVCRVLKEKVIASGSESPRAIVRIRPYVLRAHDGSSQTNPLRPEPAR
1050344..1050355                   attR                                                                                 N/A                 CGACAAGATTCG

#### region 3 ####
1451391..1451418                   attL                                                                                 N/A                 AACGGAGACACAAACATGACCAACGCAA
1455534..1455851                   PHAGE_Caulob_CcrColossus_NC_019406: hypothetical protein; VN12_06050; phage(gi414088139)     3.75e-14            MSTRATIACKQEDGRYAAIYLHFDGYQDHAGRVLKEHYTSIESARTLVAGGDIRSLANDGTPERFTDGNRTVVMPTRAALHEFARNCGTEYVYVFEDDAWHCHRL
complement(1455858..1456280)       PHAGE_Klebsi_KLPN1_NC_028760: HNH endonuclease; VN12_06055; phage(gi971740839)       2.16e-13            MTQRSPARGSITPFGYRRITCKDRKQRFEHVIVWETHHGPIPEGMELHHRNGDKLDNRLENLMLVTRLEHKRIHSGCIRVGSRWLKRCRRCQWYRPVDTEFYEYKGRNGVMGVCKRCLSDLAVIAKRNRKLRAKQNSSNQ
complement(1456277..1457230)       PHAGE_Lactob_Lj771_NC_010179: putative adenine methyltransferase; VN12_06060; phage(gi163932178)     9.39e-50            MPEPPDEAVTQPGDLWILGNHRLLCGDSSSPADLDRLLAGAAIHLCNTDPPYNVKVEPRSNNAIAAGLSSFSNDGASGRLKQGQGNAASFGVDHETGKPKHAATHKKLRPKDRPLANDFVSDEAFDKLLDDWFGNIARVLLPGRCFYIWGGYANCGNYPPVLKKHGLYFSQSIIWDKQHPVLTRKDFMGAHEWAFYGWKEGAGHKFYGPKNITDLWHVKKIPPQQLEHLTGKPAELAVRAMQYSSVQGENVLDLFGGSGSTLIGAEQCGRNAFLMELDTLYCDVIVDRFQRFTGIPAVLERTGESPIPMKAREENMR
1457660..1458859                   Integrase core domain protein; VN12_06065                                            N/A                 MQPSNYPRPTSGVQKVRSAYVFLGNSRLFIMASFRNVYTSLLLVIAGSTDRELARQVNYLKAENQILRSRLPGRISLTEREKNRLIRFAKNLGSALNELATIVHPGTIHRWIREAAAKSKARRKGKSGRPRTAKDIEKLILKLAKDNSWGYTRILGELKKLGIESVTRNTVKNILKRNGFESGPKRGPGTWDEFVNRHAKTLWQCDFFSKKIVSKAGLRDIFVLIFINVETRRVYISPSTYKPDEQWMVQQATTFIESTKAGGPKCKILMLDNDAKYSKLFMDVFEKGKIKIQRTPIRSPNMVAFAERFVQTIKQECLDHFVVFGHKHMDLLCQEFKDYYHEERPHQGLENELVIDGTRTKKRSKSGTTQSEAVSIPISEIRCKERLGGLLKSYSRRAA
complement(1458969..1460390)       PHAGE_Synech_S_CBS1_NC_016164: lambda-like phage portal protein; VN12_06070; phage(gi356870797)     1.83e-19            MLKLLSRMLSKNGDRVDRSLVRGRSTRHPWSMMRLLGRYDAATTTVDNVRHWAAADGLSASAANSPEVRRTLRNRSRYEIANNSYARGISLTLANDCVGTGPRLQMLTADAFANRFVEQEFFAWADAVGLAEKLRTMRLARVSDGESFGLLTSNPRIDSPVQLDLKLVEAEQVSSPLLAFDSYRYLDGIRFDEHGNPISYDVLREHPGDDAFSLTENYDTIDASSVLHYFRSDRPGQIRGIPDITPALPLFAQLRRFTLAVLAAAETAADFAGILYTDAPAGGEADAAEPFEPIELEKRALLTMPGGWKMAQMHAEQPATTYAEFKREILNEIARCLNMPFNVAAGNSSGYNYASGRLDHQTYFKSIRVEQSQMARTILDRILYAWLREAVLIEGYLPNSLRTLDSSFEHQWFWDGHEHVDPAKEANAQKIRLANHTTTLRPVQKLDCIEQGDFPNEIGKGSRAVGITFEIAH
complement(1460462..1460659)       hypothetical protein; VN12_06075                                                     N/A                 MPDDLRDSIRESAKAPAKASGDAGSVEQHKLTEQIAADKYLASKAAASQPKRGLRFNKLVPPGAD
complement(1460835..1461332)       hypothetical protein; VN12_06080                                                     N/A                 MSDFVCEPLGNQHDRSQFDCGVPVLNEYLAKYAKQDVKRKASAVFVLVKSMEPKRVIGYYTLCATSVALAELPDEVTRKLPRYPEIPAILIGRLARDINQPGVGTLLLSDAITRCVRVASEIAASLIVVDSKGETATHFYEKFGFISLPKLPDRMFLPMLTAETL
complement(1461329..1461619)       hypothetical protein; VN12_06085                                                     N/A                 MATVNGTSKSARIETRVSQEQKDLIERAAAFSGRTVSEFVLAHVEVAAKKVIDEHEKVHLDQAQSKILVEALLAPKKPNKKLKLAMESYRKQVESR
complement(1461708..1463975)       PHAGE_Pseudo_D3112_NC_005178: hypothetical protein; VN12_06090; phage(gi38229138)     1.97e-30            MASDPRKLKPSELCRLLNSTPLGEVISERQLYRHRQRAGARIGDNKTVDLLRYCAWMHVVRHTPKQNSGVDSYEAMKERARARNAALALAGRDIGELPVVDNPDRKDRASRDFRYFCETYFPLTFHLAWSPDHIKVINKIEQAVVHGGLFALAMARGSGKSSIAEVACIWAVLYGHRNFVCLIGSDEGHACDMLDSIKTELDSNELLLADFPEVCFPIQALDGISNRANGQLYKGKRTQIGWTAKEVVLPTIEGSSASGAIIKVAGLTGRIRGMKFKRPDGRTVRPSLVVLDDPQTDESARSLSQCANRESILAGAVLGLAGPGKKISGIMPCTVIRPGDMADNILDRNRHPEWNGERTKMVYSFPKNETLWERYAEIRAEGMRGGDGGEAATEFYRQNQAAMDDGAVVAWQERFNYDELSAIQHAMNLKLQDEAAFFAEYQNQPLPAETVSDGMLKPAEVASKINRLDRGLVSIGANHLTAFIDVQQKLLFYVVAAWEDDFTGYIIDYGCYPDQQRPYFTLREARQTLSSEAMGTGLEGSIYAGLESLTSNLLDREWQRDDGAAMRIGRCLIDANWGQSTDVVYQFCRQSKHAAVIMPSHGRFVGASSQPFSEYRRRPGDRVGLNWRVPNVNGKRAIRHVLYDTNWWKSFINARMRVSMGDRGCLSLFGSNAETHRMLSEHLTSEYFIKTEGRGRSVDEWKQRPEQPDNHWFDCLVGTAVAASMQGVVLFGTDRDVPEKRNRLSFKEMQGRRRV
1465572..1465599                   attR                                                                                 N/A                 AACGGAGACACAAACATGACCAACGCAA

#### region 4 ####
5893282..5893293                   attL                                                                                 N/A                 GACCAATCCGAG
5893418..5894980                   PHAGE_Lister_A118_NC_003216: putative integrase; VN12_24005; phage(gi16798814)       8.92e-44            MTNQPKSTGPKNRCAIYTRKSCEEGLELEFNSLHAQRESAEAFIASQQHEGWECLPDRYDDGGFSGGTLDRPALNRLLEDIKTGRIDCVVVYKVDRLSRSLLDFSRIMETFDKHGVSFVSVTQQFNTTHSMGRLTLNILLSFAQFEREIIGERTRDKIAAQRRKGKWTGGIPILGYDVDRSNASPKLVVNAEEAVQVRRIFSLYRELGSLLPVVKEVNKRGWQNKVWKTKKGVTRGGKAFDKCSIYSLLTNPLYAGLIRHKDLIHKGEHENLIEPEVFEAVQKQLKHNGRGQGNHLINKHGAILKGLLHCTACDRAMVHTFTRKDEKVYRYYTCTNVIKNGRGKCPSPNLPAGEIEQAVIQQIRAVGADVEIQNQVAAQMKATQSKQLDELQTNRRQLERQLSRDHAEIGKLAVMHDPTGATSSRIADLHVRITKCESDLSRIIASLTELERRATEKGEIAEAVLDFESIWEAFNSREKSRLIRLMVSRIEFNAKDTSIAVTFYPDALRSLKVKRKDDAA
5894977..5895375                   hypothetical protein; VN12_24010                                                     N/A                 MITVHQKLSITKTHRGRRRLEPRPEEQPVKPTSSVPRISRLMALAIKYQGMLDRGEVAGITELARLCRVTQPRMTQILNLNLLSPSIQEQLLHLPPHSSGKQAIHEKKLRAVCAHTDWGSQQLHFARCCSSK
5895499..5895858                   PHAGE_Thermu_OH2_NC_021784: immunity repressor protein (phage-like protein); VN12_24015; phage(gi526118362)     3.24e-06            MASTAKTFGKVLRERRLACGFGLREFAQMVGVSSTYISQLEQENIDPPTAERAAKMAGILGENADEWIALAGRVPDDLEGIIQKEPIGMPALLREANGLTAEQLKRLAEEAKKMKGGKS
5895855..5896607                   hypothetical protein; VN12_24020                                                     N/A                 MNERFSLVDRQVPYLHEKQIEREARFLLDEYELKFERKVTAPIPLEKITEFQLQLTLEFKDMKSLFPFADVHGAIWFEEGIIGIDQSLNPDENPLMLGRYHFTLAHELGHWCLHRHLYKENPNQPMLFEDGVRVPDVVCRSSERKKPVEWQADAFAANLLMPKPLVFQAWAEHHDGDDQPAEMATLRPASADKSFSLRGRLATTAEERDAAIKEHYAAPFAERFSVSKEAMRIRLEELKLFVENRPRLLF
5896674..5897858                   hypothetical protein; VN12_24025                                                     N/A                 MATFDLKKQLTIHDRGLLQQLLGNEPSMQAIEWAAMPKNNIAPLIAAWEAMDDARKRHYQVILQDVQHLAEPTALKVLIEELEWRHPDKLPIFSAQLGTADKALWAYQNATDAFDAAAIFARAEALRNGQQANIWNSLPKEPIAVTPDKISSLEQRIRSYYWGREMRGEVCKVHQYDRHDGSQYFFAYLPDWPDKRLCFDEQEQLTPREDAYAFSNAFVFEPNLGTIELIAKGGKKVQKELRRAFCLSMLGIEVDDEDPVKPVYQLDQLLDPSFAFVTEANERIQDVKLRRVRIVPRVKVPNIEQIEFKFREATDLSSIRSFLAAQLASMQLGFDQISVTQAGIQFQFMGNGDRKGKTMTVNVSCPNTCDLKFKPEEQELIGRACFVRWGIING
5897851..5898819                   hypothetical protein; VN12_24030                                                     N/A                 MVDPLEYLLPMIESQQMTVGNDEVSRWPTGVLQTLTDLGILVSAEDADSIRCPECGEHWEEIFAMDGPGDSTQLFIRCPEVLRIEVTQQHRRQWRPDLSSLMRFLASSLNLKGKPQELFSERLWRLGRLTWNKVSRDVLFVRGLRWPDAELPRAQIVRQRKPILISSTYAMPEEYWKTPPPQLVLRNIAWFADRFEIDVEEVAACIADATKKVGDSPILGVTEEELKLTIRRQIKAENKTELTDDIYVRAYRQLGSLRLAAEFLSDQTNAIVTKDRVKRAIDRYGGIPSLANEEDSNSIVRGVASHHRDRKGKNLATGKPTK
5899022..5899609                   Sigma-70 region 2; VN12_24035                                                        N/A                 MSAQPQDVLSDYARTLIRVKARQLVRRPEFTVCEAEDLEQELTLRILLQLDRFDPTRSSINTFFVRVVNSSVAMLIRERGRIKRNGGEGVEIESLEKMVEKADGSPAPLWTTISDQDAHRRHQSRPLSDSEAMQLRMDIASVLEQLPPDLRSICKQLLAGGHTDTRRDSQLSRRKYQAAMSLIREQFTRSGFSSE
5899687..5899989                   hypothetical protein; VN12_24040                                                     N/A                 MFAGVFRFTFDESVPIEEAEMTLHLAIFAAEGLFGKPRVAMEFHYDIQPFDNFIDVHGETEVGVAVAQVFGGLLLREFGESAFRITNLPSYDSFSHEVAA
5899992..5900765                   PHAGE_Rhizob_16_3_NC_011103: p077; VN12_24045; phage(gi195546607)                    6.22e-43            MLSKLQRGRTAKPPRILCYGIEGVGKSTFASQAPKPVFIQCEDGLDELNVDKFPLATRYDEVISALADLQRESHDYETVVIDSLDWLERLVFDRLCAEHNATSIEQVAGGYSKGYTLALTYWREIIEHLNALRNQRGMVVLLIAHSKVERFEDPESSPYDRYSPRLHKHAAALMSEWCDAVLFATRKIRTQSEDAGFNRKRTIAHAIGKGGGERILRCVGGPSCVAKNRYGIVEELPLSWAAFVQAISQSQGTQSNG
5900758..5901228                   PHAGE_Pseudo_NP1_NC_031058: hypothetical protein; VN12_24050; phage(gi100047)        8.83e-33            MADLNGFDANQVEPTGDFDPIPAGKYLAVITDSEMKPNKAGTGSLLQLTFQIIEGEYRNRLIWTRLNLDNPNAVAVQIARADLSAICRAVGVPSPKDSVELHNLPLVINVRCKKRNDTGDIVNEIKGYAKREQPTSVASPAQAAPVNSSSPPWKRS
5901228..5901572                   PHAGE_Pseudo_PS_1_NC_029066: endodeoxyribonuclease RusA; VN12_24055; phage(gi985757683)     4.96e-32            MVEFHLPYPPSVNHYWRHVGSRTLISRGGRAFRAAVCSLLASQGIQPLSGPLIVDVVVYPPDRRRRDIDNVQKALLDALQHGGAYSDDSQIVRLSIEKGQPVEGGKTIVQIREA
complement(5901692..5901889)       hypothetical protein; VN12_24060                                                     N/A                 MNALDAVAVEPLRAALTLELRFGKINPCINARARFTDAIEWPRRAEDGVASQTRARLTNFAPTIV
5901942..5903603                   PHAGE_Pseudo_NP1_NC_031058: hypothetical protein; VN12_24065; phage(gi100044)        7.22e-99            MITLRPYQEDVKAAVYDHLRSRDDNPCAVVPTAGGKTPIMASICKDAVGMWGGRVLILAHVKELLEQTADKLKVVCPEIGFGIYSAGLKRRDTQNPVIVASIQSIYKRACELDAFNLIMVDEAHLIPLEGDGMYRQFLADAKVINPEVRIVGFTATPYRLKTGPICTPEGFLNHICYEVSVRELIRDGFLCPLISKAGRVKADMSSLHVRGGDFVSDEVESLMDQESLVRSAASEIVEYTVDRKGCLIFASGIQHGHHIVNVLAEEHGVECGFVSGDTPNSERDATLARFKAGKLKYLCNVNVLTTGFDAPHIDCVALVRPTMSPGLYYQMVGRGFRLHPSKENCLVLDFGGNVLRHGPVDEIKVTTSDRIEGKAPAKECPHCQAVIAAGFATCPQCGYVFPPPDRQQHDAKASEAGILSGQVTTTKYEVQDVYYGIHTKRGASEDDPRTLRVDYRVGWHEYKSEWICFEHEGYARQKAIAWWRKRSPDPVPDSIERAIEIIEGGGLANTLAIKVRSVAGDPYERIIDYELGPMPEGIPVSESEVFTDDELPF
5903671..5905941                   PHAGE_Cellul_phi38:1_NC_021796: bifunctional DNA primase/polymerase; VN12_24070; phage(gi526177567)     1.95e-32            MSETAISYLRAGLCVLPAIASEKRPSLAGWKQYQLRLPTERQVRTWFAETSATCILTGVVSGHLELIDFDGEPELFDRWRAMVADELPHVVNRLVIEESQSGGRHAIYRCEESIPGNRKLAQRLIVAESGDTVTIAGKRYVPRRNNGRFEVTLTLIETRGEGGLFLCDPTPNYCIQQGSFESIPVLTNAERSVLIEAACALSETSPPPARVPTSLIGEGRPGDDFNERGDVRQLLERHGWQRVRGGENEYWRRPGKEHGWSASLRNNQLFVFSSNATPFEPDRAYGPFSVYALLEHGGDFAAAATALRLQGYGQTSDESGVDLSHLIPGPITAPASQSSAYPDPGPLPAELLRIPGFVSDVMDHCLETAPYPNPALAFCGALSLQAVLAGRKVRDPADNRTNIYLLALAYSSVGKDWPRKINTHIMHRVGMVTALGEKFASGEGIQDSLFLTPSMLFQTDEIDGLLQSINKARDARHENIMGTLLTMYSAANSIYPMRRKAGKEVPGVIDQPCLVVYGTAIPTHYYDSLSERMLTNGFFARMLIVESGPRAIGQDPGIINPPASIIDTAQWWSEFNPGSGNLESFHPQPITVVANEEARGLLAEARRTSETEYANSESRGDPVGTTVWGRVPEQVRKLALLYAVSANHQSPVIDAAAVRWATEFMLHQTRRMLFMAHNHVAENPFHAECLKLVRKLREEPSRQLAHSVLLKRMKIDAKTFQELVTTLEQQGDLLTVIQATAGRPQRHYRLLGESSG
5906552..5906716                   hypothetical protein; VN12_24075                                                     N/A                 MVVPAAKGLERFFWSLAWFCVLLMVLFGGPCIRNKQHPIEKGESDEQQSAEPTP
5906800..5908173                   PHAGE_Strept_EJ_1_NC_005294: transferase; VN12_24080; phage(gi39653711)              2.22e-77            MKIEQRSIADIKPYPNNPRINDDAVDAVAGSIKEFGFRQPIVVDEDGVIICGHTRFKAAQKLGIEKLPVHVAKDLTPEQIKAYRIADNKTAELAEWNYDLLPIELGDLQANGFDLSLLGFDTDELAKLMDTGVNEGLTDPDEVPAPPDEAITKPGDLWILGNHRLLCGDSSSPADLGRLLAGNAIHLCNTDPPYNVKVEPRSNNAIAAGLSSFSNDAASGKLKQGQGNAASFGVDHETGKPKHAATHKKLRPKDRPLANDFVSDGEFDRLLDAWFGNIARVLLPGRCFYIWGGYANLGNYPPFLSRHALYFSQSIVWDKQHPVLTRKDFMGAFELAFYGWKEGAGHKYYGPNNATDLWQVKKVNPQSMIHLTEKPVELAVRAMQYSSVPGENVLDLFGGSGSTLIAAEQCGRNAFLMELDCLYADVIVDRYQRFTGKPAILERTGESPIPMRAADAK
complement(5908176..5908496)       PHAGE_Cyanop_P_RSM1_NC_021071: hypothetical protein; VN12_24085; phage(gi481019233)     1.96e-13            MSTRATIACANSDGGYQAAYLHFDGYPEHAGVVLNQWYNSIEKASALIAGGELRSLNASDGAPEYFPRARLPKHLCDRASLVTFARNCDANYLYVFEDGHWHCQKI
5911617..5911628                   attR                                                                                 N/A                 GACCAATCCGAG
