gi|00000000|ref|NC_000000|  Listeria monocytogenes strain CFSAN008100 plasmid pCFSAN008100, [asmbl_id: NC_000000].68224, gc%: 35.67%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
979..2070                          PHAGE_Lister_A006_NC_009815: gp17; CY94_15335; phage(gi157325431)                    2.53e-150           MTIRAAAEITLTDINDAIVAGEAPLNPTTDLLWMDSSVTPNVLRRWDGEKWVSQTLDIKEADPEINGKIEEAITVANNALIESVSNHKPVFDKTQPSAPVEGDTWFKIDENAKTIVGVFTWNGNSWVELPLDYNALRVGKLSAITAELGDVKSGSITGAEFIHNINYKDSDDNLYTGTVKMNDDGFNSTSYLPTGIGSAVLESIISTLGGYKVAQKLIDVAGESSLGNSILTSKSLQFNENGNIKLSIDADSFYKTSWKDLPLNAGYSTAEFNTPQYMILCIFGIRIVFFRGQVQKSTAWASANAFASVPLEIQTTRTAMAYAPTSKSTGGRVHASSANAMSFMPADTSVTYFALNQLFYVLD
2121..2426                         PHAGE_Lister_A006_NC_009815: gp18; CY94_15340; phage(gi157325432)                    9.03e-66            MVLGSISIAGMSVGELIALISLIAAIVGFVIRWALVAPLRNMIDSLDITLKSLREEMSESKKDRMSLREKQNDHDKEIALLKREDKAIWKYVTEKNEKEVK
2426..2707                         PHAGE_Lister_A006_NC_009815: Hol; CY94_15345; phage(gi157325433)                     1.02e-60            MKINWKVRLKNWRTVVATLITVLGVAWTAGGFSISDLDNWSALWLSFVRFLNSPMAIVTTVVAVIGILMDPTTSKFSDSLKVMNYSEPRKDDK
2707..3414                         PHAGE_Lister_A006_NC_009815: PlyA006; CY94_15350; phage(gi157325435)                 3.38e-171           MALTEAWLIEKANRKLNVSGMNKSVADKTRNVIKKMAKKGIYLCVAQGYRSSAEQNALYAQGRTKPGAVVTNAKGGQSNHNYGVAVDLCLYTSDGKNVIWESTTSRWKTVVSAMKAEGFEWGGDWKSFKDYPHFELYDAAGGEKAPSTSASKPATSTSSNKNVYYTENPRKVKTLVQCDLYNSVDFTEKHKTGGTYPVGTIFTITGMAKTKGGTPRLKTKSGYYLTANTKFVKKI
3562..4263                         PHAGE_Lister_LP_030_2_NC_021539: DUF3800 domain protein; CY94_15355; phage(gi514051957)     2.29e-168           MRLFVDESGTITKNKNFNNRYFVIAFLETEKPYNVIRQFRDAKLKYLKRYPSSKLDITKEIKGSEMPFEMKKLIFNMLSTKSDAKFHFKIVDNHQLVNHLLNNTSLSFNYFIYLTVNEISKIPINPANNYLKMQIDDRNTAIESLNSLQEYLTIKFTMEHPIFSSVETSYKDSQNKDLIQVVDLFANTVFRVCRNHVTAHKPDKRNRELLSLCNIGCDHYFPRHFCDLDICYK
4742..4975                         PHAGE_Lister_A006_NC_009815: gp26; CY94_15360; phage(gi157325441)                    2.84e-39            MYNLMDDILEHSIVLEDALKRNWSIEVLFLKNNHHMRYKYVVPVYLDHERNIVQLQRFDERIIDINIEDIVFCEVMT
4972..5163                         PHAGE_Lister_A006_NC_009815: gp27; CY94_15365; phage(gi157325442)                    2.89e-24            MREYSFNDFKYICYVEGKKKAVEKIFSGLLETKKLKAFYRKVDKKDIDLKTIYQEYLFQCKNK
complement(5609..6418)             PHAGE_Paenib_Xenia_NC_028837: transposase; CY94_15370; phage(gi971748175)            1.21e-86            MANVSRAAYYKWLNRQPAAQELENHQLVDSIQHLYKQVDGIYGYRRITMTINRQREKEGLPKVNKKRIYRLMQICGLEAVIRRRPKKYRKVKPDYVAENVLAREFTAEKPNQKWCTNVTEFKYGNGKKAYLSAIIDLYDKSIVSYVLGHSNNNDLVFKTVRPAIRQLSKDEFPLLHSDRGYQYTSKEFKRMMEKAKLTHSMSRVGRCIDNGPIEAFWGTLKVEKYYLHKFETYEALKHAIDTYIKFYNNERYQETLNGLSPLEYRTQAA
complement(7254..10169)            PROPHAGE_Xantho_33913: Tn5041 transposase; CY94_15380; phage(gi21231545)             1.75e-33            MALKKILTAAQREQLLSVDHLSEEDFQAYFSFSDSDLDIINQHRGDINKLGFAIQLCLARYPGCSLSNWSIQSDRLISYVRRQLHLDSIELALYAHRNTRANHFNEILETFRYQRFGSVDTRNQLIAFLIKLALENDDSTYLMKKTLGFLTQNRIIFPSIATLEDIISHCRDKAESTLFSILLDSLTETQIEKLDELFLVYKETKMTKLAWLKDIPGKANPESFMTICKKVETITVLELGTINVSHIHRNRFLQLARLGDNYDAYDFSRFEFEKKYSLLIAFLVDHHQYLIDLLIEINDRILAGIKRKGMHDSQELLKEKGKLATEKLEHYASLIDALHFAKDNDSNPFDEIERVIPWHDLIQDGEDAKRITGKKNHGYLEMVRNKATYLRRYTPMLLKILSFKATSSAQPILTALTQINELKNDGKRKIPANTSIEFVSKKWERLVQPEEGKIDRSFYELVAFTELKNNIRSGNISVEGSLAHRNIDDYLISSDACVNSLTIPDTFDDYLTSRGAILDSQLQYYSNSGKSSAKMVLKKLEKVTPDEAEEYRKKLYSMIPKIRLSDLLIEVDSWTQFSQEFIHDSTGNPPNEREKKIVFATLLGLGMNIGLEKMAQSTPGITYPQLANTKQWRFYKEALTCAQSILVNFQLGIPIADFWGEGKTSASDGMRVPVGVSAIKADVNPHYKSLEKGATMIRSINDRNTSHHVEVVSTNTREATHTLDGLLYHETDLDIEEHFTDTNGYTDQVFGMTALLGFHFEPRIRNIKKSQLFSIKPTSEYPDLLGLISGRINIKTIDESYEEIKRIAYSIQTGKVSSSLILGKLGSYARKNKVATALRELGRIEKSIFMIDYVTDDSLRRKITHGLNKTEAVNALARELFFGRRGKFMERDIRRQLQSASALNVLINAISIWNAVYLQEAYDYLVKIDPEVTNYMNHISPINWEHITFLGEYKFDLLSIPKRLRKLNIEK
complement(10173..10727)           PHAGE_Escher_pro483_NC_028943: DNA invertase; CY94_15385; phage(gi971758535)         2.42e-52            MIFGYARVSTEDQNLNLQIDALTQHGIDKLFQEKVTGSKRDRPQLEDMIKGLREGDSVVIYKLDRISRSTKHLIELSETFEELGVNFISIQDNVDTSTSMGRFFFRVMASLAELERDITIERTKSGLEAARARGKKGGRPSKASQSIELALKMYDSKEYSINQILDASKLSKTTLYRYLNGRKN

#### region 2 ####
52859..52870                       attL                                                                                 N/A                 ATTTTTTATAAA
complement(54146..54490)           PHAGE_Acinet_Acj61_NC_014661: putative quaternary ammonium compound-resistance protein qacE; CY94_15650; phage(gi311992758)     8.67e-10            MKGYVALGIAIISEIFGTSMLKLSEGFTNIYPTIGVAIGFFIAFYTLSLSLKTLPLSLAYAIWSGVGTALTALIGVLVWNEPFNILTFIGLVMIVGGVIILNQRSADTKTSTSH
complement(54508..54825)           quaternary ammonium transporter; CY94_15655                                          N/A                 MNPYVLLIGAILFEVFGSSMMKASNGFKKLVPTVGLVIGMGSAFYLLSKALEHIPLGTAYAIWSGGGTALTAIVGILVWKEKFNLKILLGLLIIIAGVVVLKLSH
complement(54837..55376)           TetR family transcriptional regulator; CY94_15660                                    N/A                 MSAKKQDKRAHLLNAAIELLGSNDFDTLTLEAVAKQANVSKGGLLYHFPSKEALYAGITELIFQDFVYRFNELAENDPIEKGKWTRALIHAYTDDLNNSQVLNIASHSFSKLNPTVTENILVHFEYIQSKIDEDGIDSVLATTIRLTLDGLYYSEFFKLGQINFDLREKIIEKLIESTT
55817..56056                       DNA helicase; CY94_15665                                                             N/A                 MNKRGTGVTFIAIAAFLFSAKYISAAIFGSNLASHNRELFLAMLEYIGYPLSICSVIALLIGLAYIVWGEYEEFIIKKR
complement(56234..57388)           PHAGE_Lister_B025_NC_009812: Int; CY94_15670; phage(gi157325251)                     0.0                 MKIKKLKNGKYAVRLRIKVDGEWKEKRLTDTSETNLMYKASKLLKQAEHDSSSLKEWKFKEFYELFMKTFKEGKSSQSTINLYDLAYNQFVDYFGEKRKLNSIDAVQYQQFINHLSVDYAISTVDTRHRKIRAIFNKAVHLGYMKKNPAIGAHISGHDVAKTKAQFMETDKVHLLLEELANFHSISRAVIFLAVQTGMRFEEIIALTKKDINFTKRSISVNKAWDYKYTNSFVDTKTKKSRVIYIDNSTIQYLQSYLAWHSAYIKEYGIKNPQMLLFITYHNKPVDNASCNKALKKICSTINSEPVTLHKLRHTHTGLCVEAGMDIIYVADRLGHDDINTTLKYYSHLSSNLRQHNQSKVDAFFTLKTDENTTNFATNATKITE
complement(57520..58092)           hypothetical protein; CY94_15675                                                     N/A                 MNKRGALIGILAITIFVLASCGSTSPLKADKAGEVNNQKDTVVKSDKDILSSMNLNDPLVIDFKKAQLRHITNASENTQMNFKTDEKDFYYVYLKYNVSNSSPTMYAWSDFETAIVDGKQEKLNDPEINFGKNNGYEIQGNSEIEGNSIKLLAKKSTSKVELIPTEPLENNEFTGEEEEYVPENIIINFK
complement(58144..58536)           PHAGE_Lister_B025_NC_009812: gp36; CY94_15680; phage(gi157325252)                    1.19e-68            MEYAHKGLYINQHILVNPNQNDTEMRCTLAEEIGHYKLTVGNITKQKTINDIKQENLARNWGYKSLVPLRKIIDAYYEGFTEYYEVSEFLEVTEDFLKHSIEYYKSKYGNTVECNGYVIIFRSSIQIIAC
complement(58613..58936)           PHAGE_Lister_B025_NC_009812: gp37; CY94_15685; phage(gi157325254)                    1.74e-48            MTTFERVKVLAEKQKISLKELALKLNMGENAIYSWKVKTPGADKLKAVADYFNVSTDYLLGRTDNPQIDSDIPPEAATLAAHIDPAATEEDMKKILEYIDFIQQKYK
complement(59396..59713)           hypothetical protein; CY94_15690                                                     N/A                 MDMILKICIADGTSIVIDGFDIISMYTSIPNVEVEHSGYSWRENYYYDLLNYLNEYKYLSIKRHDCNDELKYRNHDYTFQNGDFKHNTPLFLKTSNIITIIDMYD
59779..59982                       PHAGE_Lister_B025_NC_009812: gp38; CY94_15695; phage(gi157325255)                    9.05e-42            MSVEHQRFAVAVYAKLKAINMKQSDLAKTLNISNPYLSDIINGKREASKVRKNIIEILELEIHERSE
59984..60226                       PHAGE_Lister_B025_NC_009812: gp39; CY94_15700; phage(gi157325257)                    1.24e-53            MGRPVKNKHRAINFLYGVWTLEEFAQASPRTYGWWLDNIKDFPELAEFSNWATKNQREAWAFDAVKANDWLIKKFVYKEV
60229..60414                       PHAGE_Lister_B025_NC_009812: gp40; CY94_15705; phage(gi157325256)                    2.02e-34            MIDEVELLLAKIRKYDPNFCPKSTGKYLLTELQSRHLDHEIKHKKRPKYKHRFANSIERHW
60938..61651                       PHAGE_Lister_B025_NC_009812: gp42; CY94_15710; phage(gi157325259)                    1.23e-175           MTLTTETINNLIGIKESYQASDALMKILFDREKREEIFKQFLQHDTHLEKDWFHVYFEEEHANKKKYAQDFTPTAISNVASQLVRGLTDSQGGTRLDVAAGTGSLTICKWYEDCLKYSPFDYLPSMYLYQCEELSDRALPFLLFNLLIRGMNATVIHGDALTREAKQVYFIQNDKDDLLNFSSFNIMPHSETVEKEFNIHKWIEPVIEHIESPLSVADRYLNELEIEDEEASQLKLF
61662..62606                       PHAGE_Lister_B025_NC_009812: gp43; CY94_15715; phage(gi157325260)                    0.0                 MTKKQKEILFCDYFEEWVEVYKVGAIAKITLAKYYNAAKQLRDICPKLFISDFDRREYQRIINVYAETHEKQTVKDFHHHVKACIKDLFHDGLIDKDPTYRVVIKGAEPTRAKKRKFLQKDELSKLLKSLDTSQIGFGWFVLLVAKTGMRYAEALAITPADFDWTAQTISINKTWDYKYNKGFAKTKTLSSVRTIKIDWQIVGQFKPLIKDLPENEPIFVEKFGDGTYKRQFNSTINNFLAAKCKETGITQISFHALRHTHASVLLAEGVSIHTISARLGHADVGVTQETYAHVLDELQKKDDQKMLSVLMQIA
62619..63299                       PHAGE_Lister_B025_NC_009812: gp44; CY94_15720; phage(gi157325261)                    6.41e-159           MRKNWTDEEIRVLQNNYEYVDTEIIANFLNRSYHSIKNKAVRLGISKNSEWTEDEDIYLEYFVYENDDNISKAAEFLGRTKDAVINRLVKLRKRDSSVSFIRRPWTKKEDEILKNNYIIMSNDQLAERLRRTKASVAARKVLLGLTNKHMSKEDDKMIRHLGNQGYTIKEISAEMNLSYCLVKNYIRNHRINYRRESKNEINGWRKEADATYSHYINSKKIKEEQA
63296..63871                       PHAGE_Lister_B025_NC_009812: gp45; CY94_15725; phage(gi157325262)                    2.05e-35            MRFKKGDKVEFIYGGTLTQGVVNEIRATNHDISYQIVYFGGEKKIWFAERELLSPAPVLKVPQCVADWYEKYKCALEYSIWKYIYEWADQDYESDFYSFMNHACNNPIETLIKMKYGYEVEKEPLYWVQLIEGASGYLNVRNDGIQFINSSGQTAELKTRFTEKEIKAMDKGGAYWQFAVPVEDLEGEDNE
63864..64052                       hypothetical protein; CY94_15730                                                     N/A                 MSENLYAIKRDGFYKHFPHGQYDAYLSKDCLFVKRETAENKCALNSSDEIVEVSLVEVEGEA
64214..64420                       hypothetical protein; CY94_15735                                                     N/A                 MRSFDVSTYFKSFVDDDKEALELLNEYIIRSNKRPVSVQFQVVHYPEANRDRVYIFAEFERMVKHERH
64407..64811                       PHAGE_Lister_LP_030_2_NC_021539: YopX-like domain containing protein; CY94_15740; phage(gi514051976)     6.54e-54            MRGIEFRGKIVGAEGFVYGKLLAPLASGNAYIAYDVNEVGSFVYISRSEKVDPETVGQYTGLKDKNGKKIFEGDIVDISVYDRLDWSSIKGKVVFLNGAWLVEDVGHFAITLQSETNEIEIIGNVHENLGLWEA
64815..64988                       PHAGE_Lister_LP_030_3_NC_024384: hypothetical protein; CY94_15745; phage(gi658607645)     6.68e-33            MTLREALEKHTRHIMFCGMCECGEAKYDLIVDGDLTYPPVHESTILEVNPDLLEVAE
64985..65698                       PHAGE_Lister_B025_NC_009812: gp51; CY94_15750; phage(gi157325268)                    1.64e-74            MKQEELDIILENHGKWLLNEGGERADLSNADLKNTNLRFANLRLAYLRGADLSNANLRGADLRFANLRLADLRGAYLSNANLRGANLRFADISNANLSNANLSNANLSNANLSIAYLSNANLSITDLSNANLYNANLRGTDLSDANLNWVNWQHVEGLTVICVQVDTTRKNNQIAYIKELDIWITGCFQGTLEELKDSIEQTHASNDFLKRRYYRAINYILTEADFEEDLEEENNEI
65658..66212                       PHAGE_Lister_B025_NC_009812: gp45; CY94_15755; phage(gi157325262)                    7.43e-20            MLKRIWRRKTMKFKKGDRVEVIWRSELHQGLVEEVIELTDELTDELMVKLAKTPAIYYLFKKNQVSKVELVKVPKFVADAIGTFKEKEYDLAVAIDYETYTDECVKELSLDKTMCGWLWETSNQELLARAWMDGYEIEQEPLFIMPIPYSVLPVHYYINRLDEISFKQGNAQKFTWNEIEKYFP
66865..66876                       attR                                                                                 N/A                 ATTTTTTATAAA
