gi|00000000|ref|CP011692.1|  Bordetella pertussis strain E024, complete genome. 4101131, gc%: 67.71%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
679291..679360                     attL                                                                                 N/A                 CTGTGAAGATTCAATAGGTTGTATGCATGGTTCATCCGAACCGGATTTGAGAAACTGGAAATCGCCAACC
679389..680339                     PROPHAGE_Brucel_1330: ISBm3, transposase, programmed frameshift; ABB85_03380; phage(gi52430457)     1.10e-112           MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
complement(680591..680797)         hypothetical protein; ABB85_03385                                                    N/A                 MNIDNTLIQAVVVAGVILLLILWICLPFAVFGVKRRLDRIIRLLEQQQSAPQPERRTDSEPFVSRSLR
complement(680869..681480)         PHAGE_Pseudo_F10_NC_007805: Repressor protein; ABB85_03390; phage(gi148912804)       9.90e-10            MRIGGVPAPWEPGGTTTRQMERHSQGLRISQAVNVGHVEDSGYSANDHEFIPIPELDVRLAAGKLGIENYQETEIGQILLRRSFLESFKRPIKRMRICYGNGPSMEPVIRHRNPMLVDVHPVSLDEVQPRFVYAINRGGKMIVKCLERWKDGRWMAISTNPDPDHHPFPLATDDGGEVRIIGTVLWSPYDLRNGVDERLLQGW
681883..681894                     attL                                                                                 N/A                 GCGCGCGAACGC
complement(681960..682280)         hypothetical protein; ABB85_03395                                                    N/A                 MSNLLLGLGGQLGPDAGPVAGTQITAAYFAAGGPLYRCAMLDRNRSAARAPLIDECRGHSDLARQRCSTGGVFPVEIAIQVHGPNYSVATVQTQAMLQNNLNSIAI
complement(682273..682971)         membrane protein; ABB85_03400                                                        N/A                 MSGRLLLRRCGGGQSSMGASLKVGIGSLAELLGQATNALLVSIRSQQIGPLQRKPLPSCEVENVAAVGRPQSVPAERRIGDSYTFLIYAGGTRLKLFDRIALFLWRDRYDYDPTRGCPGEQNNISLWTRLRPARKRLIAVLLNGQLWLAFIGGMFALGAALLPGYLDRVKTDQQVNTNTGELLLRCVQEANHVLRCRPVSDEQDEIVSGVDGPSLDSNRPGRESPAQDVKHE
complement(682986..683207)         hypothetical protein; ABB85_03405                                                    N/A                 MNWEVGDFQFLKSGSDEPCIQPIESSHLEARAEAMFEPLEAAMLGDADPYSDSSLAGLRNVRTMLSDLLSRSA
683225..684175                     PROPHAGE_Brucel_1330: ISBm3, transposase, programmed frameshift; ABB85_03410; phage(gi52430457)     1.10e-112           MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
684815..685300                     PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575: Putative terminase small subunit; ABB85_03415; phage(gi589286873)     2.92e-44            MPAASLPEGPRTMARPSKYQPAFAEQAAKLCRLGATDKDLADFFHVTERTLNTWKKQIPGFLQALNGGKVMADAEVADRLYQRALGYTHVEDDIRVCDGVIITTPTTRHYPPDTTACIFWLKNRRPDLWRDKPDPTNDDNAPPPVKVVIEVVNTSIPDADA
685287..686564                     PHAGE_Acinet_vB_AbaS_TRS1_NC_031098: hypothetical protein; ABB85_03420; phage(gi100002)     0.0                 MPTLNQPQARFLALPHKFRAFVAGFGSGKTWVGGAGLCRHAWEFPRVNSGYFAPTYGQIRDIFYPTIEEVAHDWGLAAKINESNKEVHLFAGRKYRGTVICRSMEKPGDIVGFKIGKGLIDELDVMKADKAALAWRKIIARLRHTAPGLLNGVDVTTTPEGFKFVYQQFVKQVRERPELAALYGLVQASTYENGKNLPEDYIPSLRASYPPQLIAAYLRGQFTNLTSGSVYANFDRRLHHTDAAEEPHEELHIGMDFNVLNMTATVNVIRAGLPLTVGELTKVRDTPEMARMLKERFKDKGHGVTIYPDASGGNTSSKNASESDLSILRKAGFTVRVNSRNPSVKDRINAVNGMLLNDEGARRWLVNTDRCPTLTEALEQQVYDKNGEPDKSTGHDHPNDAQGYFLVHRYPITPTGMSRIKLTGT
686567..687985                     PHAGE_Vibrio_vB_VpaS_MAR10_NC_019713: portal protein; ABB85_03425; phage(gi428782116)     1.75e-64            MPVDSKHPLWLANQPRWERCRTALQGRDAVHAAGEKYLPKLAGQDKAEYDAYKGRAMFYGATARTEEALIGMVFRKEPTVTLPAALQPMIEDADLAGTPVDTFIENVTKEVIDVTRVGVLVDYPVASGEFMTVGQAQAAGMRPYLATYKAEAIINWRTARVRGVNQLVLVVLAECYTDPKDEFTAEEKTQYRVLDLVDGFYRVRIYRTDLNTPAFEYTPMMNGKRLPYIPFVLIGRNGEAIDPQKPVLLDLVDVNMSHYRGTADYEHALHFTALPTAVVIGHELKEGQALKIGSSEAWVFTDPQADAKYLEFSGQGLDSIKVSLERKEGMMATLGARILAPEKRDAEAAETAKIHRAGENSVLGGIALGVGRSLAKAFRWAAEWAGAGSGTVEVKLNTEFFPAGLTAQDLTALVGALQAAAISPQTFYDNMRRGSIIDDGVTFEEEQDRIEAAGPALGTLGGQDVKPANGAV
687957..689069                     PHAGE_Pseudo_PS_1_NC_029066: head morphogenesis protein; ABB85_03430; phage(gi985757697)     1.96e-127           MSSLQTELYDATVRHAIDLVRYSNGVVRRIIALLNQVDSDLGEQITRAMGRLPASAFTVARLKELLKDVRTLNAEAYQQVRGELEKDLRDLAGYEIGYQGQLFDSLGIEFTTRGVTAGQVYAGAMAQPFQGRLLREWMAGLEAGRASRIRDAVRMGYVEGQTIQQVVQRVRGTRAKAYADGLLEIDRRNAEAVVRTAISHTAGFARDRWYDANDDIVGALAWVSTLDSRTSQMCRLRDGLRYEPDSHKPIGHKVPWGAGPGRLHWQCRSTSVPILKGMEDDPLIGTRAAKDYRDSARGKGEQVRATTTYADWLRRQPAAIQDDILGPTRGALFRKGGVELESFYNDRGVYLTLAELRRKDAAAFAQAGVE
689075..689317                     PHAGE_Pseudo_PS_1_NC_029066: hypothetical protein; ABB85_03435; phage(gi985757698)     1.09e-22            MPLHLVPDAPKPAETEKDRIRKRIKALPKPKDMIQCPRCGGREVIETRIGVFETARTWSGGTKVLLCVLCFMRGERVVLK
689440..690042                     hypothetical protein; ABB85_03440                                                    N/A                 MPLDRNDPEVKALLEEVAAEATEALSAKNKELLAELRAAKAKAKGSEIDPEEHARLQTQVEELTGKLDKVTKDSARQIEKLTKDLAEKDDALTQHLIDSGLSTALAKAGVAPHFMDAAKAMLRGQAAIKDGAAVIGDKPLADHVTEWAGTDQGKHFVTAPANSGGGGQGGNSGGKCTGNMGGSREDRVAALKVKFPELAG
complement(690471..691421)         PROPHAGE_Brucel_1330: ISBm3, transposase, programmed frameshift; ABB85_03450; phage(gi52430457)     3.36e-112           MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHN
692096..692347                     hypothetical protein; ABB85_03460                                                    N/A                 MTQKTKLPVWYLPGPFYRYEQDVKAEAAKAGVRIVDANATGSRDGAAKEVPKVTLKPEYRSKGKAEAPKEKESDPQPKDPAKT
692410..692892                     PHAGE_Pseudo_vB_PaeS_SCH_Ab26_NC_024381: virion protein; ABB85_03465; phage(gi658311471)     4.41e-18            MPLIVEDGTGLPNADSYVSVADCQAYAAAHGLAFAGEEAALEAALRNSALYLDGEYTYRGERATDTQALEWPRTVATGVPREVVNACCELAARALTGPLWQDVSSTTAGAAIEKTVGPITTKYASAAGARNDGQTRYAGVAAMLRRWLSSYGSSVKLVRC
692894..693094                     hypothetical protein; ABB85_03470                                                    N/A                 MENFLRLVVPDPSGEPGLQECCGVQLYTADGMPISGLVAMKLESSTDRPIWRATLVMDINVSGKAV
693094..693489                     PHAGE_Pseudo_PaMx74_NC_028809: putative virion structural protein; ABB85_03475; phage(gi971745311)     1.34e-08            MATFDYADMAATAQELLLEFGGPVSVRQFVTGEYDPDLGQAPTTTVDNAGIGALFDYSAQAAGLANMAGSVIETGDKQMYLAPALAAGGAMPEPKPADLVLALGATWRVVTVKTLAPAGLVLLYELQLRQA
693486..693884                     PHAGE_Salmon_SETP13_NC_022752: putative tail protein; ABB85_03480; phage(gi557307690)     1.90e-23            MSFTADLGKFAARAKGNIDTATRQATVLLAKGVILKSPFDTGRFRANWQFSAAGIQRATSMAVDPDGQVTLHRLVADIKQTRAGGVTYLSNSLPYAVPLENGWSKQAPQGMAKLTAQEFQRYVSQAAKDANK
693881..694303                     PHAGE_Pseudo_PS_1_NC_029066: hypothetical protein; ABB85_03485; phage(gi985757706)     1.10e-28            MSQDLIRAAFEKRLKDWAKARTPELAVAWQNINFTPPSNAVYLRAYVLPAATISRDAAGDHRQYRSLFQVNVVMPIGAGSRAAEQIQAELDALFQVNLIMPSGGLAVRVRTPISSGQPTTGDADHTVPISLGYDVQFYPE
694311..694811                     PHAGE_Salmon_64795_sal3_NC_031918: hypothetical protein; ABB85_03490; phage(gi100063)     4.06e-35            MNEARITAERLRSVVHYDPETGKFTRLVRLAQRHNVGDDAAHATANGYQRVGIDGQRYLAHRLAWLYVYGAWPTQNIDHVNGDRSDNRIANLRDVPQAVNMQNRRHPQADNKSGYLGVYWERGAKKWRSRVQVAGKAHEVGLFDDPAVAHAAYVAKKRKLHEGCSI
695066..695584                     PHAGE_Pseudo_PS_1_NC_029066: tail protein; ABB85_03495; phage(gi985757707)           1.77e-29            MKSGWPELNERVVRAVNTASNTFALEGIDTTKVGRFSKGQGIGTATPVSTWVDLSQVTNVAKTGGEQQFYQWRYVEDRNGRQRQRPTYKSAKFITLTLDYDPALAWYEALKEADAAKDAVVLRAKLPNNDELYYLVYPSFDSDPSMELDANMQNTATFSMMSDFTRYAPLAS
695594..695923                     PHAGE_Pseudo_PS_1_NC_029066: hypothetical protein; ABB85_03500; phage(gi985757708)     8.85e-15            MSNIIFKLQPAPTFTVPVEIPRHGEEPANIKVTFRHKSRDEMKDFLERADKSDASQDIALVNEMIAGWDGPDMEFSDEAVGLLIQNYQGAVPALVQAYSLELLQARRKN
695941..696231                     PHAGE_Pseudo_PS_1_NC_029066: hypothetical protein; ABB85_03505; phage(gi985757709)     4.91e-17            MYRPMLDKAQLAEFGLRSDDFPAAVIELWPDNVMPKVVFEAMGSQWRIGFAGPTGLDYGALPGVMRMLGVPPEQETDVFDGVRVMESAALRMMNKK
696257..698869                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; ABB85_03510; phage(gi169257310)     1.31e-64            MADEVASLVLRVDSTQAKGASADLDKLATSGAKAEQAAVKVGTAGKAAAAGLGAMGQAAKTAQAQAAAAAMTAGEMRLAMRSLPMQMTDIAVGLSTGQSPFYVLMQQGGQLKDLFGGIGPAIKAVGGYVAALITPFTAAAAGAAALAVAYQQGAEEGRRFTAAITLTGNAAGVTESQLAAMAKRISDIQGTTGNAAAALTKLVETGKIAGDSIEGLGRAAVLTEAATGRSVDEMVKDYERIADAPAEALTKLNERYHFLTLAVYERVKSLQEEGRQQDAARLALTTYAQAMEERSNQVVKNAGYMERAWNAVKGAAKGAWDAIADVGRPDAAQDVLNGLEREARQRRENIALAEQAGASVSKAERMSLAAAEACVALARDQMQTQSAIAKAQALDAQRSAVGIAARDELNKLIAQGASNEEKRAKALEENEERIRRIRAGGGTVTATEEAASIAAINKQYEKRSAAVAGSVAAGVRELEQAREREAVLRAELETTGKITSDRQKLVAFEQRIADLKAKDQLTADEKSILANETANRQQLERNAGLADQIELQKEVVKLKTLEASAQATLAADQDRYNDLLEGFTASPRVREQLQAQQQIYRDFQRQVRASEKEGLTPDALAARVQVLKLNLDQRLELLARHYENVGVLEGDWKKGAEGAFNDYAETVGNVASATRNAFADAFKGAEDALVQFVTTGKLSFAELADSVIADLMRITVRQSITGPLASVLGSVFSNAFGSALPATASWAMPELAGRRATGGPTLPRRLYEVAENGPELYDEGGRTYLLSGGDGGHVTPLSRNAYRPSMPVTVNVHGVDSQPQVRARPDARGGLSIDLIFRQVKDRLAHDIDAGVGSLPRALERRYGLNRQLA
698879..699238                     PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; ABB85_03515; phage(gi374531665)     1.10e-06            MTLPHWPAGLPLVEFSRQPISPFQRTEMENGRARHRRHTRVHPVHAHVSFVLDREQYDVYQRFCSIDLNGYAGWFLMAMNGPGGLKLRKVRWLLPVPREERIPGDLWRVSGELESMSDE
699306..699839                     PHAGE_Pseudo_PS_1_NC_029066: hypothetical protein; ABB85_03520; phage(gi985757717)     6.61e-07            MSLEKALKEAYASAPQDRVVFDTLELRHPAFVDEHGERTAVRVVLGYEDIYARLEAEAPLDGGKEVLFQAGAFRLRLPGFEEGQVPSLLITIDGASEKIVDHVEAAVQSRYPIYATYRPYVSTDLSRPQMNPPITMELNKVTVTGASVSGTATLADVHNWAFPHQRYMRERFPGLFR
699836..700225                     PHAGE_Nitrin_1M3_16_NC_024217: putative tail structure protein; ABB85_03525; phage(gi643655230)     3.27e-06            MTSDDVNRYIGLAWQFGARGPGAYDCWGLLRECREHYFGGGIPDTVFGEQARALYAEKMRTGGWEIVMQPEHGDGVLLRAGNDPHVGIYLDLDGGGVLHAMEGRGVIFSPMRALVTMGFSQPTFYRIHA
700218..704174                     PHAGE_Pseudo_PS_1_NC_029066: tail protein; ABB85_03530; phage(gi985757719)           9.57e-51            MPDITIRRDPFRPHLRQETVVARQGTRLDTILRREGFIVGRAARLARTSPFIVQRNGRWLLQAAWHVRLKKNDVVVVVVLPAGGGGSNPLQVVAMVVLAAATAGVGAWATSAYAGAAGVGATSAAALTVGAGAATAVGPVGGMVVNSLFPPARLPGTLQREKASPTYTLSAQGNMARPMEAIPVRYGRYRSYLDFAAQPYTEMVNNQTHLYQLFCVGQGRYEIEEIRIEETPIGNFSEVEYEVVEPGGQVTLFPDNVVTSAEVQGIELPAINVEGAGPKGPFAANPPGTLASEIAIDVLLPKELFYAAHDGTLESAGTGVNVYARQIDDSGRPIGTTILLGKENIVAATLTPQYRTFRYKVEPARWEVSVERNSGHLAERATRMIRDVTWLGLRSYLPSKRTYGNVTMLAVAMRATGNLNQTTARRINIIATRRLRTWDPVQGWSKDLKPTRNPAWAIADACTDREYGRGLPDSRINLAALYRLAKVWDERGDWFDGVFDVSTTFWEAVTQVARAGRALPIYHAGVIDVIRDEPKSVRTQMFTPANIVARSFSVDYVFPAHDDPDYIIVEFVNERTWKDDEVECAWPGAAKRRPYRLRLVGVTGRVQAWREGMALLARNRDQRRFASFQTELEGAIPGYADLVEISHDVPKWGLSGIVEDYDPRALRLTTSEPLQWWQGQNHYISLRGRDGVPAGPFRVEPGTHEREMRIVDLVDGQGLYVSTGEAEEPTHYTFGPGERRALLAQVMRAVPSEAGLWTLDVVNYAPSVHTAELGGQEPEFASPSLLPIVPLGPIVDSVTVFSGPRPGQQIVSATPASGAYRYEFEASDDGGVHWQPLGMAELPSLEVYLRAGSWQVRVRGIGALSGPWKTWQGNVSASAAPPPKLSALTTISQVMAIELAWTVPDAPWMSSVEIWESSTPNLGDASLMGEFRLPQSRFTRFGLSHGTRIWFWGRIRDVAGQLGPWYPDGQGVLGSASSDAGKILDYLSGQIGPEQLTRDLTQTISGMERNINTVTAKLDQEREERLSQDGALARRVEDAIAANGAGATAVKQTSAALASLDGRLRATWSVQAQVAQDGKVYAAGMALGAYAGEGGQVQTSVYFLADRFAFLNLANGKVSSPFVIQNGQTFLNQAFIGKAWIKSAQVESLDVGKIVAGVMSADRINANSLIAKLASFTTAYVKTAHIGVAQVDTLRLASGAVVTGSHSIISKSLWRGGSELATVAIGSLYLPYGGSVVVFMQYAQSGGRFPFGRNTIVSIDGEIIPNALSNPPDGVAMITWISDTLPEGKTISWSIKARHPVDGTYYISGRVAVLAIQR
704179..704595                     hypothetical protein; ABB85_03535                                                    N/A                 MSGFVKPRMGNFVMYDQIGRIHQATKGQAHRTQADARSMGLQVLEVDDLYSPDHYMVVDGKVVPRPASPITRRGLVLSGVPATPEAPADLMIGQDGYYEVTDSRVELEFGEEGTHQITVKRWPYKDWVGTIEHAEDQL
704814..705077                     PHAGE_Rhodob_RcapNL_NC_020489: tail fiber protein; ABB85_03540; phage(gi461474986)     1.85e-13            MMKDRFILYQPSLGGPVNSAFAVTPSDTQDLREVTRALYLGAAGSMRVRFADGTEHTYAALAAGRHPLRVVRVFSTGTTATDITGEV
705077..705889                     hypothetical protein; ABB85_03545                                                    N/A                 MIGVGVCLWADSTLQSGGHASRLLLDGKPFDTRAPLSLGTQARISGGRGDESLSGPLAGGPARRVKGYLPALPDGKLVARFSSVAELTGVSDAWMGGTSVGSGRRAQVFHFRKIDDQKEVQLQIVAGQYTKAVKVRFYDDRDGIKAGVMYARYVEGSQLGLDFDIIEARSQEIATAESEIGYGCAAISLVGIQEYVFLTYALDSDVILTVSGANTYIGTTTVESGTVRIGHPLAFGRNGLIKVRAGAALDKHGYALPHRMIVNDGATVLE
705894..706136                     hypothetical protein; ABB85_03550                                                    N/A                 MEPQPIVDKVAANVTYVGSGWAVIFGLSANEFAALVGAAVAVVGLLVNLWFKWQHLRIARTVAATRKQHEDEESCDLEEE
706115..706666                     PHAGE_Escher_Rtp_NC_007603: putative endolysin; ABB85_03555; phage(gi81343992)       4.83e-13            MRPGRRIKGGVAALVASGVLVLASVRLMDFLGRWEGQGQQVVYADRLARGLPTMCKGVTKHTSPYPVVVGDYWSPERCAEVERMVVSKGQLQLARCINVAISQPIFDALSSHAHNFGVPSTCASRAVGLINAGRLAEGCNALANAPDGAPVWSYVTDQRGRKRFVQGLRNRRLEERALCLSGL
706666..707181                     PHAGE_Salmon_II_E1_NC_010495: tail protein; ABB85_03560; phage(gi170676285)          7.09e-09            MGAWRRSAVVALLSAALAAGAAWTAQGWRKDAAIARQAAAFALERDRQAQATVAALEAVREEGRRRTAAVEKARDDAQELAAAAAANAVGARAERDRLRTHANALARAAVARDPDAADGSPTGASAIDLLAYMLSRVSGRAEALAGVADRARIAGLTCERAYEAVRGNVRP
complement(707178..707459)         hypothetical protein; ABB85_03565                                                    N/A                 MPFRAPLTHDELRAIRERQPWNPDVLTLLWEVKRLRSMMLRAYQLSGEFHRPVGVLANCYDEYMAQLVVEPCVLERDADVAEMLNAPAQPRKG
complement(707459..707680)         hypothetical protein; ABB85_03570                                                    N/A                 MSWSRAYSARPGLHARRRAGGYYQGIIIEQLVKASRFQAGDRVLFGEDQVQAPATEADRARRPIRTPRRYRGW
complement(708009..708680)         PHAGE_Pseudo_F116_NC_006552: hypothetical protein; ABB85_03575; phage(gi56692976)     4.72e-38            MCGRIAQKSAPEDYVEILWPNARLIFDDVAGPRYNIPPGTRPLTMHRLVDQAEALARLPWGYKPHGSRFFMVNAKLETIERHGWPWKLMIGVGRILVPADGWYEWRALDSGPKPAKQSYYIHGDAPLLFAGLSAWRRGAELDEAHGFAIVTNDALGGMVDVHDRRPVALPPELAREWVDPATPVARAKEILRAGLPETAFSWYPVRQEVGSSKYQLPDAVDPL
complement(708608..708976)         hypothetical protein; ABB85_03580                                                    N/A                 MLPGVVVLLVIDSWNDYRTLAAITNEAYDSALLEPARVLESSLEFAADGTLQVATPLYAQVMLESKGGTAKRRIYAICSALSVNLADSEYGPPGPAEVICAAASPRSQRLKTTSRSSGRMRG
709024..709035                     attR                                                                                 N/A                 GCGCGCGAACGC
complement(709036..709722)         transcriptional regulator; ABB85_03585                                               N/A                 MRILLVEDERDMAAWLMRALAQSGFTPDHAPDARTAEGLMVGNEYDAVVMDLRLPDKHGLVLLREMRNRDDRTPVLLLTAQGALQDRVRGLNLGADDFLTKPFALEELEARLTALVRRSRGRQPPRLQCGSLSYDGESRAFTLDGALLFLTPREHAALAALLTRSGYPVDKSQLFGKVFTHESEANPDAIEVVLHRLRKKLTGSDVRIVTVRGLGYMLESTVSESSES
complement(709703..710275)         PHAGE_Bacill_AR9_NC_031039: hypothetical protein; ABB85_03590; phage(gi100073)       1.56e-06            MLDREGYRPNVGIILVNGKNEVFWGKRIREHAWQFPQGGIKYGESPVQAMYRELHEEVGLKPEHVRILGRTRDWLRYNVPDHFVRREWRGHYKGQKQIWFLLRLVGRDSDVCLRATQHPEFDAWRWSQYWVPLDAVIEFKRDVYTQALNELAVILFRRHHETRYLRQRVHGPRSTDSPSSETDGHAHIAG
721266..721335                     attR                                                                                 N/A                 CTGTGAAGATTCAATAGGTTGTATGCATGGTTCATCCGAACCGGATTTGAGAAACTGGAAATCGCCAACC

#### region 2 ####
1960478..1960489                   attL                                                                                 N/A                 GCCCGCCGCGCG
1967475..1967687                   PHAGE_Pelagi_HTVC008M_NC_020484: 30S ribosomal protein S21; ABB85_09455; phage(gi460042545)     3.46e-05            MPIVRLKENEPFEAALRRFKRTIEKTGLLTELRSREFYEKPTAERKRKHAAAVKRHYKRIRSQQLPPRLY
1967707..1969737                   PHAGE_Helico_phiHP33_NC_016568: DNA primase; ABB85_09460; phage(gi371671350)         5.15e-52            MIPESFIQDLLARVDVVDVVGRYVQLRKGGANLLGLCPFHNEKSPSFTVSPTKQFYHCFGCGAHGSAITFLMEHTGASFPEAVRTLAAAVGLTVPEENHSPRQQAESARRKAEVSRHTQVLDAAQAHYLRQLRGSPQAIAYLKQRGLTGEIAAHFGLGWSGTDRHGLSHVFDNYEDPVLVEAGLVIESEDGRRYDRFRERVMFPIRNARGSLIGFGGRIIGKGEPKYLNSPETPLFSKGHELYGLWEARLAIRQEGQVVVVEGYMDVVGLALQGIANAVATLGTSTTPDHVKKLLRASDKVIFSFDGDAAGRRAAWRALQACLPVLRDDIAIRFLFLPAEHDPDSYVRELGAEAFRTRLGEAVALSRFLLDELASRHTMGEAEGRASCLHEAKPLLAAIPECALRVQIERELARLVQLTPEEMAQVLAQQPARPLASAAAPAQASAPAAGREGGPGHADEAPPDWAFEPVHDFEPDAYSVGAVDGEPSMPAAGGWQERKGRQGGDWKGKKGDWKGKKGDWKGRRDNDTGGYEGRRTMPSLARRLLCLLLAHPELVDTMGDQQLEVIDHGPHLGLVRDLILLAQTSGARHVGALMEAADPDSDLYVVLKGLRADVLAQEDLPHPQTEWDDALRRMEFDAARAEMAKLAESGLATDEARRRYLELSSRIMVLKNAGAQ
1970423..1972705                   PHAGE_Synech_S_CBS3_NC_015465: group 2 RNA polymerase sigma factor; ABB85_09465; phage(gi331028036)     8.10e-39            MTKSTGKSPSAIDAATAQSTTAKRAASMAAEKAPAKTAVKVAKPAAKTAAKKTATKTVAAKTAAADKPAKTTKARAKKAEDKLADLVGAARPAPSGRRPGRPAKNANNDSDAFDDSMDGEGEVLPDLKPPKRGGKRGKADPKDLIARGPVSPEEYEARRNRLKQLIKLGKDRGYLTYGEINDHLPDDLVDAEAIDGIISTFSDMGIAVYDQAPDAETLLMSENAPVASNDDDVEDEAEAALTTVDSDFGRTTDPVRMYMREMGSVELLTREGEIEIAKRIEDGLKHMVMAISACPTTINEILAHITRVREGQAQIDEVVDGLVDPEDGEEYAGAGVTADEDEGDDGPAGGMSSKQLEDLRVKALAKFDEVSKQFEKMRQSYEKEGYKSDAYLKAQDIIQTELMGIRFTAKMVEKLADTLRAQVEEVRQLERAVLHTCVDRAGMPRSHFLKAFPGNETNLQWVLDEVAAAHAYSETLERQIPAVQELQQKLIDLQTRVVLPLKDLKDVNKRMATGEAKARKAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQETGAEPDPATLAQKMDMPEDKIRKILKIAKEPISMETPIGDDDDSHLGDFIEDTATLAPSDAALHGSMRDVVKEVLDSLTPREAKVLRMRFGIEMSTDQTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRADKLKSFLEGQ
1972715..1972793                   tRNA                                                                                 N/A                 GGGCCTCTAGCTCATGCCTGGTTAGAGCAGCGGACTCATAATCCGTTGGTGCCGAGTTCGACTCTCGGGGGGCCTACCA
complement(1973115..1973414)       PHAGE_Burkho_Bcep176_NC_007497: gp17; ABB85_09475; phage(gi77864642)                 8.98e-10            MNRIGGVGIAWYRKEDYERVRAISNDAHTFPDTFEDWEKRAEERREEILKLGHVVIKAYIDPDTFPAWCRANRYKVDAKGRMAFASAEAHRVTSHVHKD
1973699..1974112                   PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; ABB85_09480; phage(gi157166006)     1.67e-29            MNMEIRPVRTEADYKSALKEISRLMESDPELGTPDGDRLDVLATLVQAYEARHYPIDLPDPVEAIKFRMEQGGLTPKGLEPMIGKRNRVYEVLNRKRGLTLPMIWRLHTELGIPAESLIRSPAPPRCELSIGCIRPG
complement(1974072..1975022)       PROPHAGE_Brucel_1330: ISBm3, transposase, programmed frameshift; ABB85_09485; phage(gi52430457)     2.98e-112           MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
1975065..1975119                   attL                                                                                 N/A                 AGTTTCTCAAATCCGGTTCGGATGAACCATGCATACAACCTATTGAATCTTCACA
complement(1975121..1976071)       PROPHAGE_Brucel_1330: ISBm3, transposase, programmed frameshift; ABB85_09490; phage(gi52430457)     2.98e-112           MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
1976114..1976168                   attR                                                                                 N/A                 AGTTTCTCAAATCCGGTTCGGATGAACCATGCATACAACCTATTGAATCTTCACA
1976146..1976159                   attL                                                                                 N/A                 ATACAACCTATTGA
1976274..1977356                   membrane protein; ABB85_09495                                                        N/A                 MQTESNPLAERFIARNLLDLAIRITLIGGLTVWCYRVAEPFIGMLLWSIILAVTLAPLHMRLTRLLGARPRLAAVVLTLATMLVLLVPGAMLTASLGDSLVNIFHHSTGRIVRIPAPPDFVIELPLIGVRLHEIWLQAMTNLQDVLKPLQPHLATAGRWLLAGMASAGLGIAVFLASIAIAGVILVYADPAKRAAHAIGVRIAGPEQGVALAQLTAATIRAVAQGVIGVALIQAVLAGLGFLLAGVPAAGLWAIVALLICIVQLPLFLLMVPMVVYVFLNNTPTVAIVFAVWCLLVSLCDNVLKPLMLARGVDIPIPVILIGALGGVLAAGIVGLFLGSVGFGLGYVLFMQWVRQQSPAG
complement(1977372..1978133)       sugar ABC transporter permease; ABB85_09500                                          N/A                 MNWYAIKAIYKFEMARAWRTLMQSVASPVISTSLYFVVFGAAIGSHMVEIDGVSYGAFIVPGMIMLSLLTQSVANASFGIYMPRFSGTIYEIHSAPISYVEIVLGYVGAAASKSILLGLIMLATARLFVPFHIDHPVWMLAFLVLTAVTFSLFGFIIGIWADGFEKLQIIPLMIITPLTFLGGTFYSIKMLPPFWQTVTLFNPVVYLVSGFRWAFYGSADVSLGVSLGMTLAFLLVCLLTVRWIFRTGYRLKT
complement(1978130..1979053)       PHAGE_Bacill_G_NC_023719: gp245; ABB85_09505; phage(gi593777701)                     2.67e-20            MQAVISVQGLSKTYASGHPALKNINLDIYRGEIFALLGPNGAGKTTLISIICGIVNPGSGRVLADGHDIVREFRAARDAIGLVPQELTTDAFETVWNTVSFSRGLFGKPADPALIERILRDLSLWDKKDSRIMALSGGMKRRAMIAKALSHEPRILFLDEPTAGVDVELRHGMWQMVRRLRENGVTIILTTHYIEEAQEMADRIGVIRKGEIILVEDKHALMSKLGKKQLVIMLDAPLAALPALAGDYQLELAAEGTQLVYTYDNQVSGGIAALLRELDARGIGFHDLQSSESSLEDIFVSLVSAQT
complement(1979152..1979652)       GCN5 family acetyltransferase; ABB85_09510                                           N/A                 MLIRSETPADQRAIFDVTQAAFRGHPHSEQTEAYIVQALRAAGALTLSLVAELDARVVGHAAFSPVQISDGSPSWFGLGPVSVDPAHQGRGIGTALIEHGLARLQARGAAGCVLVGEPAYYGRFGFRPEPGLVLPDMPPTHFLALTFGAPARGTVTYHPGFAARDA
complement(1979685..1980428)       permease; ABB85_09515                                                                N/A                 MDALHVVVVAGAVVAGFVQGLSGFGYGLTAMSVWAWSIDPRLAAALVVFGSLTGQLIAAFSVRRGFDWRRLLPFLLGGLVGIPIGVRILPMLDVHMFKALLGCFLVLWCPLMLAVKYLPRITAGGRLADAVVGGLGGVMGGIGGFTGTLPTLWCTLRGFARDEQRSIIQNFNLGTLLVTMATYVGTGIVTADMLPLFGLVALAMLIPTVLGTRLYLGISDQAFRRIVLGLLTLSGVAMLASSLPRLL
complement(1980524..1980763)       membrane protein; ABB85_09520                                                        N/A                 MRWRSLMWILWPSFLAAGVGSALIFALIDPLDVAIFGQVPTSRTGFYTVSFFVLWLVTALSSTVTAYLMPPGGQDETPF
complement(1980777..1980929)       hypothetical protein; ABB85_09525                                                    N/A                 MAGPLVAIIGCVITIYLAMTRYGDQPIAEGAVKRGLVVERVAAPAADARR
complement(1981015..1982505)       cytochrome C oxidase; ABB85_09530                                                    N/A                 MTQGTPAAPGGPSDPQPPAWRPAPGPRRADGETLEQTLADVRSKIYPRSVSGIFARWRVVFVVLTQLIFYGLPWLQWNGRQAVLFDLGARKFYLFGLVLWPQDVVYLAVLLVISALALFLFTAVAGRLFCGYACPQTVYTEIFMWIERRVEGDRIARIRLDEAPWSARKLRIKATKHVLWLAVAWWTGSTFIGYFAPIRELGHQLFALQLGGWQWFWMLFYGFATWGNAGFMRESVCKYMCPYARFQSVMVDHDTFVVTYDKRRGEPRGGRSRKIDHKAAGLGDCVDCSLCVQVCPTGIDIRDGLQYMCIGCGACIDVCGQVMDKMRYAPGLIRYTSERAVDEGLDGRRARSHLLRPRVLIYGGLILALAIAFAVSLGMRNPLRVNVIRDRGALGREVAGGLVENVYRLQIINTSDQPLRLQLTAEGIDGLAVLAGRDGSDVVEVEAAANKLVPVVLRAPRGDTAPGAHAIVVQARSQDTGRVLEVREPASFYLPE
complement(1982597..1983535)       cytochrome oxidase subunit III; ABB85_09535                                          N/A                 MSDFVNGFWSYFIGIIAIGGIVWCVWLLYSQRRWLSTRPAGGVVEDTGHVWDGDLTELNNPVPRWWTWMYLLTCVFALGYLVLFPGVGSYQGTLGYTSVGEVKQKQAELAERVKPVYERFGGMTPEQLVADAPAREIGQRLFLNTCAQCHGSDAKGSTSFPNLTDGDWLYGGTPEIIAETIAKGRHGVMPPWKGVIDPRMAGDIAHYVRSLSGLAVDPVRVFRGKREFANYCVACHGVDGKGNQALGAPNLTDDVWLYGSSEASIVRTILDGRDNRMPAHEEVLTPEQIKLLSAWVWGLSNQAPAKAAEAAR
complement(1983532..1983708)       cytochrome oxidase; ABB85_09540                                                      N/A                 MMGYLSALITVLSMGTFLGIVWWAWSSHRQSANRESALLPFALPDEDGPAQQDGAMQP
complement(1983711..1984373)       peptidase S41; ABB85_09545                                                           N/A                 MAQKQHGFFSHQTLEKNIGLMIIASILVVSVAGLVQIIPLFFQHSTTQAMPGVEPYEPLQLMGRDVYIREGCVGCHSQQVRTLQAEVQRYGPYSVAGESVFDHPFLWGSKRTGPDLARVGERYSDEWHRIHLRDPRAVVPESNMPAYPWLQHADLTGQNVAQRMQALRRLGVPYTDEAIAAAPAAIAGKTEEDALVAYLQALGVGARRGAASEPQRAAGG
complement(1985995..1986138)       membrane protein; ABB85_09555                                                        N/A                 MSILYLLLPLSLAFVLAIGVALWWAVFSGQYDDTEDQGAAILRDNDN
complement(1986135..1987109)       membrane protein; ABB85_09560                                                        N/A                 MRPTSILAVPADLPGADRQARRHALVRLGVAWLAMMQVMMFAWPGYVRNDGIPADALATLDWAIVLMNWAALLMTVPVVLYCAWPIWRGAAGGLRRGRAGMDAPVALGIVAAFVPSVHATWTGRGEVYFDSVTMFVAFLLTARYLELCARQACGASALATPLVRRLHQAGGELGAAADRLATRFVFVQVALALAAGEAWTQIDAAHAVPVMVALLVMSCPCAMSMAVPSAMACAHSALLARPEATTAQGDALLAAAARVARQNLYGSLAWHLLMTPLALAGWVAPWLAAITMLLSSLAVAGNAWRLRRHRWDAAPAAAVAQPAP
1987179..1987244                   attL                                                                                 N/A                 TGTGAAGATTCAATAGGTTGTATGCATGGTTCATCCGAACCGGATTTGAGAAACTGGAAATCGCCA
1987324..1988226                   PROPHAGE_Brucel_1330: ISBm3, transposase, programmed frameshift; ABB85_09565; phage(gi52430457)     1.33e-104           MVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
complement(1988223..1989497)       adenosylmethionine-8-amino-7-oxononanoate aminotransferase; ABB85_09570              N/A                 MSNTTPAWMAQGYPHIWLPYAQMKTAAPPLPVVRSHGSLLELADGRTLIDGVAAWWTACHGYNHPHIAQAVREQLDRMPHVMFGGLAHEPALNLASRLSALLGPGLERVFYTDSGSVAVEVAMKMAVQFWLNQGERGRTRFVAFRGGYHGDTFGTMAVCDPDEGMHAMFRGLLPEHDVLALPRDEAALAALQAHLERHAGRIAGMLVEPLVQGAGGMLLHDPQVLARLRELADRYGILLIFDEIFTGFGRTGTMFAFEQAGVRPDIVTLSKALTGGTLPLAATVASARVFEGFWSDDPGHALMHGPTFMGCALACAAANASLDLFEREPRLRQVAALEQALRAGLEPCRDLPWVRDVRVLGAIGVIELDGIGARDDLRRRLVEAGVWVRPFGNIVYLTPAFTIAEDELQALLEAVRQVVAERRP
1989601..1990794                   8-amino-7-oxononanoate synthase; ABB85_09575                                         N/A                 MSKLDSLFTAALEQAAQRQVRRRLRHAAATPPGRLALDGRTLVNFSSNDYLGLARHPLLAERASLWATRHGAGAQASRLVCGNLDLHEQVEAKLARLKGTEAALLLASGWQANAAVLPALFKAAAAQGEPQVYTDRLNHASLHHGCQAAGVRQIRFRHNDLAHLEHLLAERAGAPGARFIVTESVFSMDGDRADVPALAALAARHHAFLYLDEAHATGVLGPRGMGLAGLAPGGVDLAMGTFSKGLGSFGAYVAGSRALCDYLVNACSGFIYTTALPPAVLGAIDAALDLVPRLDQARATLQGHGERLRASLAAQGIDCGASSTQIVPAIIGDAGHALALAAELERRGLLAVAIRPPTVPAGTSRLRIALSAAHGEAELDQLIEALAAGWRAVRQAA
1990791..1991444                   biotin synthase; ABB85_09580                                                         N/A                 MSAPRPLLRFEHGWAHDAGVWAPLRAALADWPQQAADAGYFGPAVEPPADGAPVVAIGHSLGFLKILQSPAPGCIAYIAINGFARFAGGADYPPGVAPRLLERMLARLELDPAAVVDDFRRRAGSAPHAGTPRPEPLRHDLRRLREADERQALAASRLPLLALAGTADPIVPPALTRAQFGACAGLHWRDGGGHLLPASDPDWCAGRIRAFLAGLPA
1991441..1992877                   ATP-dependent dethiobiotin synthetase BioD; ABB85_09585                              N/A                 MNTRSTPTIGQRFDRAAARYETHAEVQRHAAEQLAERIAALPLPAEPRILEIGCGTGLLTRALARRLGRADWTITDIAPAMLAAQQAGPPPAGRVRHQLVDGEHPAGLPGGYDLICSSLAVQWFGDLDAGLARLAGLLAPGGLLAIATLAEHTFSEWRAAHQAHGLHAATPAYPPAERIGRTLAGLRGGITREAYRQRHPDALHFVRSLKAIGATAPAAGHAPLSPAAFRRVLAQFDRQGNHVTYDLAYGLWRKQAPGVFVTGTDTGVGKTLASAILARAWRAHYWKPLQTGVAEEPGDTETVAALAGLEPARLHPPAHVLQAPLSPWAAAPLEGVTLDAAAIAPPQVDGPLVIEGAGGLYVPIDERHMMIDLIARLGMPVVLAARSGLGTINHTLLSLHALRERRLPVLGVIMLGEPSAGNRHAIEHFGGVPVLAQIPRLARVDAEAVEAWAARIPPLADCLARRWPDPQETPACRP
1992865..1993224                   murein hydrolase transporter LrgA; ABB85_09590                                       N/A                 MQALTGFTWLLALQALGEACSRLLHFPIPGPVTGMLLLLVALRWPPVREPVALAAQFLLSHLSLLFVPVGVGVMTHIALLAEYGLRMAAVIVLSTLAGMAATYWALRVGRSATPEADDA
1993310..1993960                   membrane protein; ABB85_09595                                                        N/A                 MYLRLGQVPLANPVLWSMVVLAAGLLAFGVPYPTYFGGAQFIHFLLGPAVVALAWPLWMRRAELRRRWARLLWAALFGGAVACASAVLLGWAVGLPRDIILSLAPKSVTAPVAMGLSETLGGIPALSAVFAALTGLVGALTGKYLFDLLGPVRGRQDWADRGFALGTVSHGIGAARAIQVNADAGAYAGLALGLQVILASLLIPVAFRLAAGLGGS
1994100..1994165                   attR                                                                                 N/A                 TGTGAAGATTCAATAGGTTGTATGCATGGTTCATCCGAACCGGATTTGAGAAACTGGAAATCGCCA
1994197..1995060                   PROPHAGE_Brucel_1330: ISBm3, transposase, programmed frameshift; ABB85_09600; phage(gi52430457)     5.07e-97            MNTHKHARLTFLRRLEMVQQLIAHQVCVSEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVCYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYN
1995120..1995133                   attR                                                                                 N/A                 ATACAACCTATTGA
1997208..1997219                   attR                                                                                 N/A                 GCCCGCCGCGCG
