gi|00000000|ref|CP011847.1|  Clostridioides difficile strain DSM 27639 chromosome, complete 4263997, gc%: 29.15%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1461445..1461645                   PHAGE_Lactoc_bIL312_NC_002671: Csp; CDIF27639_01381; phage(gi13095918)               7.93e-21            ClostridioidesdifficileMKTGVVKWFNNEKGFGFISVEGEGDVFVHFSAITGDGYKTLEEGQSVEFEVVDGAKGPQAANVVRL
1462066..1462494                   regulatory protein; CDIF27639_01382                                                  N/A                 ClostridioidesdifficileMNILFFLTPKSEVAYIYEDYTIRQALEKMEYHKYSAIPIISKDGKYVGTITEGDFLWTLKNDLNLDLKGLEDVPVTDINRKMDNSPVSINADIEDLVIKSLNQNFIPVIDDQDTFIGIIKRRDVIGYCYEIIRGYKNLANDN
complement(1462637..1463392)       peptidyl-prolyl isomerase; CDIF27639_01383                                           N/A                 ClostridioidesdifficileMEKKVLATVGEKEITNIDIENALKSLDPYQAMQFKTEEGKKHLLNDLVNQELFFLDAKEEKLDEEEIFKLEMKKIEENVLKQFAINKVLSSVNVTEDEKVKFFEANKSSFSKPESATAKHILVDSDEKAKEILAQIKSEEISFEDAALKHSSCPSKDMGGDLGTFGRGQMVPEFEEAVFSMAKGEVSEPVKTQFGYHIIKLEDLQESTESTFDEVKAEVEKSLLYQKQNEVYGNKINALNAKYGNLVKYND
complement(1463513..1463929)       hypothetical protein; CDIF27639_01384                                                N/A                 ClostridioidesdifficileMYKEKLFDNYFKFLALLFWPIMWYKWIVISNGTLENMLFTIYAIVAIVFIILYSVFMIKYKDITQIDFFYRISTLLAFIFTLFSFLIYPKSLFFLYLKIIFTGIYLYYSIVKTLKFKDDEGVVGIMSSLLLIVITLFY
complement(1464093..1464599)       PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; CDIF27639_01385; phage(gi209901280)     1.52e-09            ClostridioidesdifficileMNNLDKLFELASQEGIIIHYTTYIAGDLEGLYINKHGIKIISLLSNLKQNSKKLTSILAEELGHHFTSLGYYVSSYNDYYTKIIIDKCENKALKWACEFLITEEDIINIINSGITCVYEMADILNVDITFFQKRLEFLSLKKQSLQLGNNKYLILTNLPYFYIFDPIS
complement(1464681..1465001)       PHAGE_Clostr_CDMH1_NC_024144: putative repressor protein; CDIF27639_01386; phage(gi640884900)     3.70e-17            ClostridioidesdifficileMFAKRLRELRKEFGLTQRELGEKVGVSQRVLGYYETENRFPDEHILNKLADVFNVSVDYLLGRTLVKENIDTVAAHRKNPHEELPEEAQEQLNDYIEFLLNKYKKK
1465170..1465367                   PHAGE_Brevib_Jimmer2_NC_041976: hypothetical protein; CDIF27639_01387; phage(gi100059)     1.30e-09            ClostridioidesdifficileMFKNNLKYYRKCKGMTQIQLARKAGITNDYISQIERGIKNPGLLMAKKISSILEQNIEEVFFIQS
1465472..1465912                   PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; CDIF27639_01388; phage(gi209901307)     2.82e-40            ClostridioidesdifficileMENKKDILFKETDKRLHNYKYLDIKIKNINLDIKRCENEYSGCGAMVYTEKTSNTYNISSSVENEVLKREERLRKLKMEKEDIEIEKEKIENALTCLNDIEMEFFNLFYNSKTKNNMTYISMKLHLDRTSCYNLKKKMIFKLSEIL
1466161..1466604                   PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CDIF27639_01389; phage(gi90592649)     3.46e-22            ClostridioidesdifficileMLKYKEILETIIEILKKNFTESIFIDDESVQGSEGSCFFVSILSVICTPVMLNTNNKDIVISIKYLPKPQSKSIRMYEVSDELNKLFNRNIKVTDRKLNITKLEQSIKKEESIYVLNFTLTLNYLDSVYEEDVVYENMEEINLNLGE
1466609..1467673                   PHAGE_Clostr_phiCDHM19_NC_028996: putative tail sheath protein; CDIF27639_01390; phage(gi971763880)     3.18e-112           ClostridioidesdifficileMAIGLPSINISFKELATTVKERSARGIIAMVLKDAKALGLNEIHEKEDIPVDLSAENKEYINLALMGNVNTPNKLLVYVIEGEADIQTALDFLETKEFNYLCMPKAVEADKTAIKNWIIKLRDIDKVKVKAVLGKVVGNHEGIINFTTEDVLVGEKKYSVDEFTSRVAGLIAGTPLSQSVTYTKLSDVVDIPKMTKVDAESKVNKGELILIKEAGAIRIARGVNSLTELTAEKGEMFQKIKIVDTLDIIHSDIRKVIIDDYIGKVTNSYDNKCLLIVAIKSYLEELEKSALIESDSTVEIDFEAQKSYLKSKGVDLSYMTLQEIKEANTGSKVFLKAKIKVLDAMEDIDLSIEI
1467687..1468115                   PHAGE_Clostr_phiCDHM19_NC_028996: putative tail core protein; CDIF27639_01391; phage(gi971763881)     7.43e-40            ClostridioidesdifficileMANMEARNVMSGTWGELWLDGNKVAEVKKFQAKMEFTKEDIIIAGQMGTDTKYMGYKGKGSITLYHVSSRMHKLIGEKIKRGSEPRFVAISKLNDPDSYGAERIAVKNIAFDDLTLADWEVGVKGEIEAPFTFTEYDFLDII
1468241..1468687                   PHAGE_Clostr_phiCTC2B_NC_030951: loader of DNA helicase; CDIF27639_01392; phage(gi100045)     6.53e-17            ClostridioidesdifficileMSENGLLKNINIVDLLLNADTENLERPSTIVELKRLSTIFGQEFKVMCRALTISKDEEIQNTCLKIDENMKTDIDLPEMQMLTIIEGVCDLDGKLLFKNKELMDKFKAPTPKELARKLLLPGEITNLYRILQDVMGYGKNAVIEEVKN
1468714..1468881                   PHAGE_Clostr_phiCDHM19_NC_028996: hypothetical protein; CDIF27639_01393; phage(gi971763883)     9.45e-05            ClostridioidesdifficileMYYYWKKKGIRPSLFYAMDKGELKLIEAFFALEIEEEVEKMKHGYGVCPLTGGGM
1468881..1471334                   PHAGE_Clostr_phiCD481_1_NC_028951: hypothetical protein; CDIF27639_01394; phage(gi971820114)     9.90e-14            ClostridioidesdifficileMGNVREEGINMYLTDNYTPKMNQIISVTDNFRRATVAVSLSTNVMASSIKNSIGSASNRVNSLNSSLRKVQTTASSVSSTMTKLSSSINAVSGVIGSLNGSIMRLAITIAMIIDYFNKLIQKKNEFNSNIMIILIFKAKSDEVEKTKNKLLGNLKKIGGKIWNIVIKAKDMTKRVISSILGKLKQVEKRPYQGSINLKDMVSSAMGRILPKLMLFKNTFWSGVIAIKDMASGIISKVFPKLRLFAGKVWSGAIAVKDMASGILGSIKGKISDLTNGATIGVAVKKGVDLLGQEQNQKVVLESVMKRNTGKVNQIDVDDYYGSLVRMANDTPFDPEDVVAMGTKAKMISNITGGKKEKDITQAMVDVRALNMNTSSEQDVSAAFLSAAKGNMESLNTLVGENYKTFDEALEGISVKQMGLAKEMSNTIPGIISGAQTSINNGLKSIVKPFDDILGQGLKKIKTFIESGLGNLAGLSEKMAGKIGNVMNGKIIIGNKYDQMQSRSVKNGKEFSDSTQYRISNEAEKRKMMVENKQERFENHAATMIGNAPKAIVNAGSTLLQNIDFTALIDSLLPVVNLVNNLLDSINNKSPIAQGLISIFGTIVTTAFQLIGPVVEAVSPIITRIFTFLGEYAPQINNFIETLGVIWKTVWETLGPLLETGWKIIEPILGAFFNILDKVCKIVKDICKWWQTMINKIKNGSITGTVLNLVEKSKKNYKDNPYAGTKAGDSGKAYSGKKGNNAFGLNYVPYNDYQTRLHEGEMVLTKQEANQYRSRKNGGNINIAKLADTIVIREEADIEKITSKLVASIQLAQLGGVL
1471334..1471756                   PHAGE_Clostr_phiCD481_1_NC_028951: LysM domain protein; CDIF27639_01395; phage(gi971820115)     3.81e-61            ClostridioidesdifficileMEMWLRQAEDRFRFPVFPSSFSINGKAAVNSSSILKIGEIATFGGVALKSISISSFFPNKDYTFCDYTGFPSPYDCVNKIEKWMKEGFILRFTITETNINMEVIIEGFSYEERDGTRDVYFTLDLKEYKRIKIPKVTPKQ
1472038..1473567                   PHAGE_Clostr_phiCD481_1_NC_028951: NlpC/P60 family protein; CDIF27639_01396; phage(gi971820116)     0.0                 ClostridioidesdifficileMIINRSKDSSSNEISFVSKDMGFLLTQSEVSYNFKDKLVEDIAKQVFAENRLSVGTIAKTNVKYTKMFIGVNGYDTIMSAYTEASKKTKKKYMIEANLDKFNVIEKGTVTLSVMFEEGFNIINTTFSESMENVKNKVIVVDQYGSKISEKIDNEIFKEVNVIMQKVIQQQENQDVDIDSEFNGIEKSCSLKGYGDVSCITGRGVKVKDSYTKLVGLFYIDTDKHTWQNGEYQIELELNFQNLMDEKSAGQDEPKEESNLGGEDYAGGKEFTAEFTAYCPRKEEGGDTDCRKKKLDPSKKTCAAPMVGKYEQTYYTKEFLNKHPLLNYGDEIQVITGVSGRDGVYKVNDVGPAITIEKNGTYHIDILFGNVEEASKFGRRKGKIIIGGYSGNVSDKAKIVISEAKKHLGKPYKWGGNGPSSFDCSGLMVYCFKKVNVSLPRTSNQQSKKGKKVEQKNLQAGDLVFFHNPVSHVGLYIGNGEFLHAPQKGDVVKISKLSSRRDFNTARRVL
1473583..1473909                   PHAGE_Clostr_phiCD481_1_NC_028951: hypothetical protein; CDIF27639_01397; phage(gi971820117)     5.59e-65            ClostridioidesdifficileMANPINEFIGIIREEGKYHNQPSFFIGKIKSKLPDLKIETNNIILEKEDILIDSWMIDRQLETFDTETNQEHQHEVKNPFIDNFESGDMVIMFRIGEKFAVVSKLVSL
1473909..1474337                   PHAGE_Clostr_phiCD481_1_NC_028951: Phage protein XkdS; CDIF27639_01398; phage(gi971820118)     2.64e-83            ClostridioidesdifficileMSTIFPFIGVPEDYILPKTEELPIFREVAWDFEKDEPILEKGDFKIIEKKEALKVWIYKCIKTNRYEHEIYSLEYGTELSELIGQKYTKGLTESEASRFIKEALLINPYILEVNVKSANFNRDILSANVKVSTIYGEVEINV
1474330..1475382                   PHAGE_Clostr_phiCD481_1_NC_028951: XkdT protein; CDIF27639_01399; phage(gi971820119)     1.05e-179           ClostridioidesdifficileMYSDQTYEVIKNRTLENINLDIYKGEGSFLNNMVSGNNLELSKIYLELSKMHKMAFIQDTYNQFLDKRVNEFGVYRKLGTESNGEVEFIGEKGTVINNGTIISYRDLLFVVIKDVTIGSEEGDNSPVQALEVGKKYNLPTNCEFKLVDNISGVTKITNTRSFEGGTDIETDEELKERFYKIQRNQATSGNKAHYEEWALEVDGVYNVKVYPRWDGPGTVKVLIFGKNNQAVDTETIERCQQHIDEEKPIGPTITVVTPLPIEISISAVMKLEDGYTLDNVKESFLESINTYFRDIRGEIIYTKVMGILINTTGVHDLSNLLINGSTDNITINEDKIPSVTTVNFSEVENQ
1475379..1476077                   PHAGE_Clostr_phiCD481_1_NC_028951: hypothetical protein; CDIF27639_01400; phage(gi971820120)     1.54e-66            ClostridioidesdifficileMKLIDKLPSFDRNYIVEEIQGAYDTELNILKEDIDDTFNQLFVDTATWGLDMWEDILCIEKKELDFDTRRSNIKAKMRSRGTSTIEVIKSICEAYTKSETDIKVYSDEFTFVLSFIANNCDYKTLLDCSDMIERVKPAHLLHYLEPIILDKSMVYCGGGMVCSEEVKVHPYFEPIIKCSAVVNCGAGMLSREEIKVYPLSIKCIENNCKINIAIANDTGVENVVVYPKSEVV
1476078..1477064                   PHAGE_Clostr_phiCD481_1_NC_028951: putative phage tail fiber protein; CDIF27639_01401; phage(gi971820121)     4.00e-58            ClostridioidesdifficileMEEKFYIILTKIGREKIANATALGELVGLTKFQVGDSNGEYYEPTEEQTALKNVVWEGNINSLRIDEKNPNWIVIETILPGTVGGFMIREAAVLDNENNIIAIGKYPETYKPRAEDGSIKDLVVKMILQLSNTSNVTLEVDPTLVFVTQKDIQDLDDKFDKNIKEIKVKIGDTDILTTDSKDLSGAINEVVKKIENISFDDVISGQIQTDISVLKNSYNKLSEKVLDILIYLELESEVTVDEAGYWYDTLANGNNIVAIEGLKLDLNRKCITGEIGNVIFRDVVLPFSANRVRYIHDMDNNFVETKSSNTYLKEQKDITLNKYSYEIR
1477086..1482317                   PHAGE_Clostr_phiCD211_NC_029048: hypothetical protein; CDIF27639_01402; phage(gi981220878)     4.67e-176           ClostridioidesdifficileMKQNKLLQRGAYFNDKNILIDDFDKRYNDYDFVEFFTGISNSTFGLKSDGNLYACGDNTGFQLGLGKDSSERRMFSKVKIDNVKYVSCGSKHSVAVTKDGFAYGAGTSNVGQLGVIESTVYYEFTKLPIDDVKTVACGYDFTFVLKNDGTLYSAGLNSSGQLGLGDTNNRVTFTKVNIDSVKDVVTYNQSVFIIKMDGTAHACGLNSNGQLGINSTLNKSVFNKIEGMDNVKQIACGSSHTILIKNDGTMYTTGSNGYGQLGTGNNNNSIVFTLSSINNVKYASCGNNHTMILKYDNTLFSTGQNNYGQLANANKDVASRNTFVKVNVENIKDIKCGSQFNFLINGSKEIFVSGCNLAGQLGSFFHTTFLYEFSKVQSSNLDNYSGLLVNDDYLYVTKDNSEFLNVKLSDNFQDYKKIELTDNNMFIVMNDGTLYACGLNNYGQLGLGDTVNRSVMTKVDIDNVLDIKGNGNSTFVLKNNGTLYSCGYNSSGILGLKDNTNRNIFTKIEIENIKEFCVESNYIVALNHSKELYGWGNQSYIVYGDNRNYPYKDTRVSNVEKIATWSDTLYILDSTGATKTIGYSYNGSGGYPAPSSSSTYREGGYINKNTSYRTLEFYNTSKTKLVNLFAFYNGCVFVDENGLAYCIGENNINFRGGSTTNENNSLRFINNSGVYYTNTDGTDYTCYQWTYKLIRCSIFDSPQNIIGNSKNILYLSKNNSTFKCTGNCITYGINSQNWYSYFSDSSNGAIALGNEFILKNYSGECLLKGYGKATNGEFGNSTNISSISNYDTGLKDIKDIIVKNNTVVVVDKNNNIYVTGANQFNKLGIGEYNNQPIRKFTNITEQSNSFIFMDDIKEITTSRNTMFIVKNDGTAYATGNNSSGQLGLGDTINRNKFTQINLDNIKKISTSIDGNTTFAIRNDGTLYSTGLNTKGQLGLGDIVNRNTFTKVNIQNVRDVVLGTTHSHAIKDDNTLYSCGENTHGQLGLGSESNHPDVLTFTVNNITNVRDVYCSDTTTFIVKDTNIAYCCGYNNNSQLGMGNTTDQYSFIKCMENVKEVIPNEINTYIITIYNTAYSTGLNTDYCLGLNSNSNQSSFSEIPISNVVKVAPNRNNAVLLLTSEGDVYTAGKCSNGSGTGSETPEKIKKIASKAKDIGMNYRCGHYVSDNGDLYGTGFNDCGQLGVGNVTKRDTFIKTNTRVKKILPLEYANIAIKDTNDIYICGLNNYGQLGVGNRYDSRNNDNRIFNYKHMNFVMGDLTSIKNRHNFILLNNKIVIPTTKDIDYGLVLGNLYKGDLYTELPYEDIKEVSISKTHIIILLNDGTMYGCGTNYHGELLQDLSINQVDEFVQINVSDVKHVSCGDNFTYFIKSDDSLWSIGKNSEYQLGIGHNNPVTELQRITTISSCKEVHCGKNYTLVVTTSNELFVQGYNDKGALGLGSDSENTIIKFFTKALTDIREIKSYGSDHILVLKNDNSVWVTGKNRDVYKIEQPVEFLKEFTIVPISEDVNTVKDVLATDNTLYIISEVGTTNAAIEITEKSISSIKIKIQDPNKDISRIEMLINGESVKSVSDLITEKISFEVPPDKIKIGENKILFRAYCKGDDLYASLFIFKESTGNSIIKDSYVMIGNRMYKVVNTTSNEQDITITLDRGLEEDLNLGDPIYQLINKTKVQVKINKSDLFKDMKLVEIKKSDSSYQEIYELEEANIKSAQPKIIVEKGDKWTAIKRPSMIFRYDAENNEPQA
1482334..1482687                   PHAGE_Clostr_phiCD211_NC_029048: hypothetical protein; CDIF27639_01403; phage(gi981220879)     3.76e-19            ClostridioidesdifficileMFKFDKNKIEQIKQGRKVEMQYKDISDISIGQVKQDDDITNNFIANAEIYEMLLNQSSVNEASNISTFSVRKSGGESGMVEVYVALILRGKKTIEEVPAVIREQVRIRCKELEIPVE
1482950..1483210                   PHAGE_Clostr_phiCD111_NC_028905: putative holin; CDIF27639_01404; phage(gi971820067)     2.50e-48            ClostridioidesdifficileMDKLITELSSLGAIGILCALLFKNTMQEKKEDRDMYKKTVENFIELSTQQQEINKNILVQMGIMKTDVEEIKEDVTDIKGMLQNGV
complement(1483418..1483873)       hypothetical protein; CDIF27639_01405                                                N/A                 ClostridioidesdifficileMGLRDKFAQSFARSKTMSGPEKKANEIMGKLLLKKAILPIVLMFVIIIAGAMLKINSWVTLGINLVIAVGAFFYIRNSSKKYQNFKPYVGNLISLEKKGKKEYVAIIKQGKLPVKLQIAYGGEDLEHVKKNQMVQISYNPDAKIAILVNRQ
complement(1484101..1484520)       PHAGE_Brevib_Abouo_NC_029029: transcriptional regulator; CDIF27639_01406; phage(gi971767216)     3.25e-10            ClostridioidesdifficileMDTLGERIVYLRKAKNLKQYELEEMLGCDNLSKFERNIRKPNYEILKSIAEIFNVSVDWLLNGDNLSHKSDLICDSSSNYPLNSINSNEIKLLNNFRKLNDYDKAKIEGMIELKLHEYEKEKDLGKIEYNKNKDEKIDK
1484819..1485028                   PHAGE_Bacill_BCJA1c_NC_006557: cro; CDIF27639_01407; phage(gi56694875)               1.40e-10            ClostridioidesdifficileMDARKKWIPFLGVQVKQRLIELNMTQRELAKKIGVNENYLSAILNGRRTGKKYKSSIYQLLNIEYSEDD
1485060..1485269                   hypothetical protein; CDIF27639_01408                                                N/A                 ClostridioidesdifficileMCKLDSDGVIECCRAIDDFITALSNIKSLNMERLNTLTKYSSTCSILLKEGNYEGCTIVYRKMLEELKT
complement(1485486..1485884)       PHAGE_Paenib_Vegas_NC_028767: helix-turn-helix family domain XRE family transcriptional regulator; CDIF27639_01409; phage(gi971741618)     2.82e-09            ClostridioidesdifficileMDTLGKRIAYLRNSKKLTQRKLMDILKFENLGKYETGDRKPNCDILMSIADYFNVTTDWLLYGKEKVNVNSSVKEDKEDYLHVTNDEMTILNLYRQLNERDKIKIEGILELKISEYKDLKKHSSNNNEDKMV
complement(1486305..1488797)       PHAGE_Mycoba_Enkosi_NC_028936: transporter-like protein; CDIF27639_01410; phage(gi971757643)     6.20e-11            ClostridioidesdifficileMNHNTSIKNKDSNPKIFLVLTLYLLGIFMGAIDTGIVSPARTIIQNSLGVNEKTGIWMITIYTLTYASVIPISGKLADKIGRKYVYLVSIFLFGSGSLICGLSSLFSNFYILLIGRVIQAIGGGGIMPIATAEFGTTFPENKRGMALGLVGATYGIANILGSSIGSTILSIFGTQNWKWLFFVNLPICLIILIGGVFCIKNNKSESKEKIDKLGTLMLICIIVSLLYGLMNIDFFNFKNSIQDISVYPYLLTFIVLIPIFIFIENRAKDPILSFEYFLNPRILIVLILSLIVGIGMMGMVFVPQYAENALKINAGSGGYFVAILGLFAGIAAPLSGRLIDKFGAKKILLLGFSVSMIGSLYLVLIALKTNTVFSVCVSLIFMGLGMGFTMGTPLNYMMLSNTRLEESNSALATLSLIRSIGTSISPAIMIGFIAHAGLSVQDNIMDLVGKPSTPKIVQLEELENMIDDLKSDPEMAKNLKNVSIPNMNDTSNINMDMTGGKLPKSLLNKVQSADTTNITNITKEISTTMFDEKVPSIITKIQKNVQKGIDGTQSGINGIEDGENKLNSGIKGVQTGIDNMVKARAGINQGIDGVKKGIAGVDKGIKGMEQGLEKQDEAIKELTTAYNKIPTTEKTPTDNENNSNEQNQSNTSNSESDDTKNDSTENKNNNSSENKPNVNEQKESLNAQIQQLKKTRDDLNTKLQKNKTQKNELSKKLRSMESQKKELQSKLNNSISQKKDMEKSLDTMQQQKKSLQAVLAKTQEVKTEIPKAFDKSKLDYINSIENNRTKIENTLQSTLNSGFKQMYITVFCVNLLAFIILLFYKENKTR

#### region 2 ####
complement(2536302..2536676)       PHAGE_Clostr_phiCD505_NC_028764: Transcriptional regulator, BlaI/MecI/CopY family; CDIF27639_02394; phage(gi971819872)     6.06e-29            ClostridioidesdifficileMKISKLPEAELKVMRYICEANKVLTSRELVAAMEEKYEWNESTTFTVLKRLERREFLSTEKIGKLTHYNILVKEKKYLRFETKEFLKNIHKNSISSLMSALHGEDDEVDEDKLSELEECFKNLK
2536895..2537128                   PHAGE_Brevib_Abouo_NC_029029: XRE family transcriptional regulator; CDIF27639_02395; phage(gi971767218)     1.40e-09            ClostridioidesdifficileMKTKVREFRTNMGLTQQQLADLVHVSNRTIISIEKEQYSPSLMLAYRMAQVFGTTIEELCCLKENKEMEDKKHESKE
2537112..2537525                   hypothetical protein; CDIF27639_02396                                                N/A                 ClostridioidesdifficileMKVKSKRSFIVGIIVCVLCCASLVIYCILKDKRFLISSFLLIVIAIFNFCNAFSRKGIVEELHDSKDERDLYLTMKTSHILVKIMNYTLFTFTFLFIIAYSAWKNQSLLVIAITLCVIEIFLFVAYLLINIFLEKKE
2537544..2537840                   hypothetical protein; CDIF27639_02397                                                N/A                 ClostridioidesdifficileMYFKTYILKREVNNKQLEITRSFDLDNLICTATEILKDNEIDLIITDEVNNVVWRNEKSTPPARECLVIAIEVYWWYTSIFLLYHINYVIKKNYLNRF
2538123..2538440                   hypothetical protein; CDIF27639_02398                                                N/A                 ClostridioidesdifficileMDFGNINLILIGIIVIIGTTIIYLIKPKTAFCSKKYFNKLESIYGNIDKKKTVKLEVLYRYVTGLEYIAIGLFTRRLDITIIAIILVAIITTALYYLIRKKYITI
2538576..2539040                   hypothetical protein; CDIF27639_02399                                                N/A                 ClostridioidesdifficileMDFGEVKSELSDKDLKDNEEALNKYKKYYLKVYKYYSEMDSIKSIQDIEIEQSRLKGQLQKNSNPIFALYISIMAVVFSTTINLTFDLSDITNYFIRMIMTLLFIVLLIFLVNKGILPIAIPYRNNIQFYTTALDVLEDMKNKILRERKYKKRR
complement(2539368..2539529)       hypothetical protein; CDIF27639_02400                                                N/A                 ClostridioidesdifficileMCENLLDNMYIEKRKEEYRIKLLKIRETDIDIYNKLESIVYKLSEKKLEKNNK
complement(2539581..2539976)       PHAGE_Clostr_CDMH1_NC_024144: putative anti-repressor protein; CDIF27639_02401; phage(gi640884877)     4.87e-77            ClostridioidesdifficileMLKELLDDAGFDNKSKLLTAKTLYKKAEIDLPIEINEEEHYFDTKQIASKLKIYSKSNKPAQMAVCEIIKKIDLEDGEVKGVWEINGSWTGTVNKYTKSVIDKVRTWIEENNRPTKIAGEKKNYYVFYKIE
complement(2540029..2540394)       PHAGE_Brevib_Jimmer2_NC_041976: hypothetical protein; CDIF27639_02402; phage(gi100019)     8.06e-25            ClostridioidesdifficileMKNELMMFEGKEIEVFEFEGRILFNSKDVANCLDIKNVNENIILMNEKQVVKLRNSDISNTDIRKLNNAGENFLTESGVYKLIFKSRKEEAERFQDWISDEVLPSIRQTGAYITNNVIPKS
complement(2540514..2540666)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_02403; phage(gi640884876)     2.02e-09            ClostridioidesdifficileMKNCRKDKRGFSVLLDKEKLDKFDEVLEEKNLTKKEWLEEKIDEELEQKE
complement(2542075..2542998)       PHAGE_Clostr_phiCD505_NC_028764: exported protein of unknown function; CDIF27639_02404; phage(gi971819848)     1.37e-12            ClostridioidesdifficileMVGAFVLPNYAITLSEMSNLWGNFTMWILVPIITIVLLIIAVSSMQYILVMIAFLLIIYSFIEKKIVMALVSVLFFTYSIYLCATWKDKSLIADNKVETVKAQRETVEREKEMERRRIQEEVDKERYIEKHGMEISENDLKVKLEALVPQEYKGKKYELKVEKFKRYSMYFDLTVQNEKFSNSEECKKFVKEIANDLKKIKISKAYFKFHSKDDGGIYNSVYIDYFRNIQNNVDNVENLEFNEFELKTEEEEKREQEKIEQEKNSYNNYIQNRVVDPLDRIKKLKELLDSGAITQEEYNKKKKELLE
complement(2543192..2543344)       PHAGE_Clostr_phiMMP04_NC_019422: hypothetical protein; CDIF27639_02405; phage(gi414090473)     1.92e-11            ClostridioidesdifficileMDNFLFNVLASVTASYIVYLISKLIKKVKSHSTAKSDLKIDINFKYHRKK
complement(2543618..2543950)       hypothetical protein; CDIF27639_02406                                                N/A                 ClostridioidesdifficileMNDMARDVFSVKMTPLEAQKMVEKNLEADLVSVDIYNLENNKSIIVTIFEKYYARSNSDAGLVVICENTTGKTLVKITSTGSAIGLFQIDWGTGNNLIKRVKKILIDYII
complement(2543977..2544231)       hypothetical protein; CDIF27639_02407                                                N/A                 ClostridioidesdifficileMENKDIKLTICIFAFVIGIIVLFCCIGLGQFNMDCIIKQNGGSIATEQYNIYLEQSISQYRNFGSILVLLGGIGILFDKSVRKY
complement(2544667..2544960)       PHAGE_Geobac_E3_NC_029073: transposase; CDIF27639_02408; phage(gi985758480)          2.58e-41            ClostridioidesdifficileMIRNRKLSRSISDVSWSEFIRQLEYKANWHGRQIVKVGKFFASSQICNKCGYKNEEVKDLNIREWIYPSCNETHDRDINASINILKEGLRLITIQNK
complement(2545659..2545850)       PHAGE_Clostr_phiMMP01_NC_028883: putative transcriptional regulator; CDIF27639_02409; phage(gi971820005)     3.70e-21            ClostridioidesdifficileMKISKLPEAELKVMRYIWESEKVLISREITKSMEQKYEWKDTTIFTVLKRLLKKRVFRNGENR
complement(2545955..2546332)       PHAGE_Clostr_phiCD505_NC_028764: hypothetical protein; CDIF27639_02410; phage(gi971819871)     5.94e-18            ClostridioidesdifficileMKEEILIEKLLRVELIVMEYLWKKDTLMPKKEIVKEIKQIYGWHKSTIKILLKRLVDKRYLARYIINFQSYYKIIIDNKEYYTFKKKVLKSSKSIKIMHSLTTIHKNVSKEKLDLLDEYYRNLKE
2547136..2547630                   PHAGE_Synech_ACG_2014f_NC_026927: recombination endonuclease VII; CDIF27639_02411; phage(gi100249)     2.61e-07            ClostridioidesdifficileMKNKKGFTLVELLVVIAIIGILAIVALPALFKNIEKAKIAKLEADISAIKSASLSYYADESKYTDGGMISWVKKDGKIIINGGFKDDPLADKIENLGMPYNGSYLLMSSPGHEKYLELSILPEGEISKSGLDKLKSDYGSSIDIKNDQNKIDIVIKLLNDKSNT
complement(2548622..2548855)       transposase IS3/IS911 family protein; CDIF27639_02412                                N/A                 ClostridioidesdifficileMTKYDFNFKLKVAKFYLNREGRDILIVKQYGVYNHSQVERWVNILGECALKIKKIFYTIWFKLDVINYMMITKYSVQ
2549017..2549367                   hypothetical protein; CDIF27639_02413                                                N/A                 ClostridioidesdifficileMIQKKFFMGFCGFLGFLSLRYFSSGNVADLTYIGFFAFFSNFIIAKINGDKADERYVQDEKAAMAFTGQLAIIELFILWCITIVSRNVELMCVLLSITYAITLNVYAIKLYILEEK
2549369..2549569                   PHAGE_Brevib_Abouo_NC_029029: XRE family transcriptional regulator; CDIF27639_02414; phage(gi971767218)     1.77e-08            ClostridioidesdifficileMPKFICNLKKYRQLKELTQEQLAEKVGVRRETIMRLEAGKYNPSLKLAIDISKIVDTPIDELFIFD
2549892..2550068                   hypothetical protein; CDIF27639_02416                                                N/A                 ClostridioidesdifficileMFRDKMDKCTHMLTAYIGSSYDYCDFIDTQLDDFILEYGEKVVESCLHQVMVLVSKYN
2550293..2550493                   PHAGE_Lactoc_bIL312_NC_002671: Csp; CDIF27639_02417; phage(gi13095918)               6.17e-26            ClostridioidesdifficileMNNGIVKWFNNEKGFGFISMESGDDVFAHFSAIQTSGFKSLEEGQKVSFDIVKGARGPQAENITIL

#### region 3 ####
3282029..3282040                   attL                                                                                 N/A                 GATTTATTAAAA
3283177..3283188                   attL                                                                                 N/A                 AGGTTTTCTTAT
3290882..3292003                   PHAGE_Bacill_G_NC_023719: gp350; CDIF27639_03066; phage(gi593777806)                 4.62e-15            ClostridioidesdifficileMQVSILTAIIVIISSSCVYFFNYTLTYKSMIYSLSERSKHIYEYVERNIDKNTFTEINSKEDQSKKSYKSSKILLESVKNTTGVMYLYTAKKTKDGSLVYVVDGLNSSRSDFRNAGDLIEKEIWGDLNKALDNHILLPKKIKSTSWGYIFISYFPIHNDVGKVVGVIGIEFEAKHQYNTFKFISIVTPIIALLTCLISALIAVILFKRISNPTYTDFANTDYLTGLKNRNAFEIDMNNLNNSNLKNLISIISIDLDGLKKINDKFGHQTGDLYIKQASKIIQYVINKKYIVYRIGGDEYIIILKNLSHKEINNIINNINLKIVEENSTNELKLSMSIGYAIFDEKVDVSLFDTYRRADSQMYDNKRKINKQYQ
complement(3292084..3293802)       ABC transporter permease; CDIF27639_03067                                            N/A                 ClostridioidesdifficileMNNNAISSKSISLKSKMNLDIKKCMLTVLVMSLVIFLLAPIIYLFVQAFLDKDGVFVGLQNFQEYLASESLLNSLKNTVFVSVISTVISLTLALVYAYALTRTKIKFKGFFKSLAMFPMFAPTMMHAIGLVYLFGNQGLVTNLLGVHVPIYGAVGIILAQIIYVFPQSFQILYISLSSTDYRLYEASNTMGISKIREFISITIPSIKYSLISSAFVSFTLCFTDFGAPKVIGGEFNVLSIDVYKQIIGQQNMPMGATVSILLLIPAIISFIVTKKIEKNQNSYITSKSIPYKVKTNKLRDSILGGVVGIIAFGIIAVMLTVILSSLISVWPYDLRLTLEHFSMKNSIDGIKPFINSIKMSLLTAILGTSFVFLFAYLNEKTEKAPYLKSFGYFLSTLPMALPGLVLGIAYVLFFNKLEFNFMDTIYIKNLFNGLYGTLLIMVICNIVHFFSVAFITATTAIKKVDKELDMVAKSMGINSVSILKNVTIPLCLPAVLENFMYFFLNSMVTISALVFIYTASSKVAAISIVQLDDKGSTAQAAALAVLILVTNILVKVIYEFIKNRLEKRTNFN
complement(3293807..3294529)       PHAGE_Bacill_G_NC_023719: gp245; CDIF27639_03068; phage(gi593777701)                 6.32e-24            ClostridioidesdifficileMTAYNNIAFPLKERKVSKEKIDNKVKEVLETVGLTNEAHKYPKALSGGQQQRIAIARALALEPKFLLLDEPMSALDAKVRHKLRMDIKRLQKELNITTIMVTHDQEEAITMADKIAILNGGDIMQIGTPEEIYQNPQNLFTAQFIGDTNCFDNGDSILTVRPEYVQIEKSTKENYQGIISNIEFRGNLLRVEIKDKLNENFIISDVSIKEWVNLNLVEGDLVKISIDEKYYLKYPKVKGA
3295663..3295851                   PHAGE_Clostr_phiMMP02_NC_019421: hypothetical protein; CDIF27639_03070; phage(gi414090402)     1.25e-36            ClostridioidesdifficileMTKTILCDYCNKGINKDDNKYITFHKKSHMKTNICINCALNLIDKDKLNENIINNQHDYSKK
complement(3296098..3296802)       PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CDIF27639_03071; phage(gi90592676)     5.00e-92            ClostridioidesdifficileMRLKFKSKESTSREKHQSAESLAKFMLNNKSFLGITLSILDEWKNNIDSSKIEDIVKNNFRFEESIIKDKNYKEFIKLLNSFYNGTEDELNGRRGRFLELIWDVVGTYNGKEFTQKIDEAIVLENEVKISEKDIDIVYIGEIKDKGIANFIEMHECKASANTTLRTPLKPKHRGKLELMQSVIEISETEEIKCDGLIITFNANKRRLERKLKSYGFEYFKIIPRAEIEERVFDK
complement(3296804..3297235)       PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CDIF27639_03072; phage(gi90592674)     5.24e-99            ClostridioidesdifficileMELDKMKYRKLVNDVELVNVLIKNIELSDVILHKDENIKNESIKCDVNMKYECEEFKKLSEVVEFYPKFNLRIECQGEGLVNLKFELRAIYKFNSIEDYEDDYILMFIERNVPVNIWPYAREIISSITTRIGYPALVISPYKA
complement(3297253..3297849)       PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CDIF27639_03073; phage(gi90592673)     2.00e-135           ClostridioidesdifficileMERFVYKGEFNMNNYSIMFENKSILDLKQTCYLDSLYNLFEEKIQYVTKTLKNNNIEEDEWDIQFIKEDALQSIKNIEEDFITDKTLDWRINLSKIIKKVLDKSKANFKIADEMYHNPMKKSEQYYDLLSNIFDNLEELICIKYKEYEISRNIRFTNIGNLVNNDNSSNYIDNEHIEFDFNFKFEIEDYDNDDYALAA
complement(3298362..3298658)       PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CDIF27639_03074; phage(gi90592672)     1.19e-64            ClostridioidesdifficileMLIQEKSFYPNNIYPKIDFLKIKRQLKSIYKNDLSDCGSICIIERKGYSLSVNSIGEVNIYYDLKFKQCVQDAVKDIELMFKSQIRSFYLIDRLEGSN
complement(3298675..3299490)       PHAGE_Clostr_phiCD119_NC_007917: putative lysin; CDIF27639_03075; phage(gi90592671)     0.0                 ClostridioidesdifficileMKIGINCGHTKTGAGSGAIGKINESIETRNVGYKVIDKLKKLGNNVVDCTIDKASTQSECLSKITAQANRQDLDWFISIHFNAGGGKGCEVYTYKGKQYQDAIDVCKKISDLGFTNRGVKDGSGLYVVKKTKAKSMLIEVCFVDTEDANKYLSLGADKLATAIVEAITKHISSAEENNYNRYKHTIVYSGDDKVSADILGLYYKREKESYLVTDIKDYKPHRTQNLYVIGGVTCNKMKEMSKTTGEKFTQLYGNDVWSTMDKAIEFVKEKL
complement(3299487..3299747)       PHAGE_Clostr_phiCDHM11_NC_029001: putative holin protein; CDIF27639_03076; phage(gi971764687)     1.49e-53            ClostridioidesdifficileMDNLISFIPEQLLILVAALYVIGAGCKKYKQLDNKYIPVVLLILGIGFSIWMLGLNPSAVLQGVICWGISIGINQTYKQLKEENKQ
complement(3299766..3299996)       PHAGE_Clostr_phiCDHM11_NC_029001: hypothetical protein; CDIF27639_03077; phage(gi971764686)     2.22e-47            ClostridioidesdifficileMNEEVIKEKIKRNEIRINRHSDEIDELKVANIESKAELKALCENLNSLTSMLKWLIGTMITTLVGFFIFAVQRGIF
complement(3300035..3300205)       PHAGE_Clostr_phiCD211_NC_029048: hypothetical protein; CDIF27639_03078; phage(gi981220886)     1.90e-20            ClostridioidesdifficileMYNLLKLMIEQKNYSTKEDLQHKMDVFYAVNRITEEQYLELTGLLNKEETPVEPTV
complement(3300217..3300564)       PHAGE_Clostr_phiC2_NC_009231: hypothetical protein; CDIF27639_03079; phage(gi134287362)     3.21e-60            ClostridioidesdifficileMERGNRIIYNQDGKILLQTGETTGDVLEHDAITELHYLDIEFGSIDYSKQYIESINPITKELVLKDIPVILTDEQKRLKALEEELSMLKEENKNRDSEIVNTAFEVENMKLNNNI
complement(3300589..3302238)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03080; phage(gi640884887)     0.0                 ClostridioidesdifficileMTTEWNFNYIGTGKKVILKPGKYKLECWGASGGGRFDEWTECAKGGYSKGELTLKKETILYVYAGESGYKKFSNISDWAGFNGGGRGPNEGVDPKFTTCGGGATDIRLIGGVWNDEQGLLSRIIVAGGGGSIGTSSFSSIGLGGGFAGGMGVGAGTTCTGGTQYEGGVTVNSNGNGSFGKGGIGNVCAGGGGWYGGAGASSSGVGGGGSGYVLTKDSYKPKGYIPTSEYWLENVNSIAGDNTSNAHGYAKITLLQALPFLNISSYNSSTATFKADHTDPTLLTKIEYFIDDVLKETITTDLTLEKTINYTLEDNALHTLKIVVTDSANATVEKVVSVSRGIAPLPSGSTTDEVTNKWIEIKDAFKTGKTSIINTLALKNIEANLNNTLVELSEKIKLSFDSSDASVQELQNRITELNNQLSQRKKWATGIYTFTQNDVDNFIAKVGKISYLTVQTNLNFTPSMIVVRGIKLKKTASVFLDFSDITNFGDFGTAGHYYFNKRYYYDFCIKFENFSSNSFQLRLFNMEGLEGDEITSACVLGDTFIWYAYE
complement(3302256..3303059)       PHAGE_Clostr_CDMH1_NC_024144: putative tail fiber protein; CDIF27639_03081; phage(gi640884886)     0.0                 ClostridioidesdifficileMAIDKSYYTIITDVGKAKIANASVTGNKVGFVKIQLGDGGGSEYTPTESQTALKNVVWEGNIGNTTTDETAPNCIILESLIPSSVGGFMIREIGYLDDENNLIAISKYKECYKPSIEQGAVVDMKVKTVLIVSNVNNIELKIDPTIIFATLKDIQELETKIGTINTKIDTTKTELTSNIETAKTELSNKIGDTTQLNTTDKTNIVSALNEVKTSVDSIETTAEKTSYNNATSKLTATTVQGAIDEVVAKIENFNEVNISIQNDMLPI
complement(3303071..3303688)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03082; phage(gi640884885)     4.59e-150           ClostridioidesdifficileMDKEINLINYLPQVLQDKEEYIKVFNAENKEIKTLHDKLDDVLNDQFLEDLTPSGVKRWEKIMSITPKSNETLEDRRFRIFSRYISKLPYSERFLRNWLDNIVGEGNYELTINNSTYNIHLESDARNQDWFEEVHSFVSSIKPCNMSLDYTRVLVSKDNYMNFGITTLMGQEITIYPWSPPDIETYGEIDVLTGNGVGYQEITIF
complement(3303681..3304727)       PHAGE_Clostr_CDMH1_NC_024144: putative baseplate-J protein; CDIF27639_03083; phage(gi640884884)     0.0                 ClostridioidesdifficileMFELMTFENIIKRMLDSVPDTFDKREGSIIYNALAPVAIELTETYIAMDELLDQTFVDTASYYYLEKRCKERGITPLPATNTIAKGVFNIDIPLDSRFNLGEYNYIAIERVSEGIYKMKCETAGPIFELGQLIPIEYIDGLETAQLTEILINGEDEESEDSLRQRYYDSLNSQSFGGNIQNYKDEVNKIQDVGGVKVYPVWNGGGTVKLVIINSNFKVPSTDLINLVQEEIDPNPKGEGLGLAPIGHKVTVTGVMSTTINISTTITYKNGYTWENIKSIAEEAVDDYLNELNMSWEDEENLIVRISQIETRLLSIDGVLDITNTMINEVKSNLTIDSNSIVVRGDVVG
complement(3304728..3305147)       PHAGE_Clostr_CDMH1_NC_024144: conserved hypothetical protein (XkdS-like); CDIF27639_03084; phage(gi640884883)     3.33e-90            ClostridioidesdifficileMLPSDNLEYDIEDVSIINFDVRQEPSKTFKLNIEKNKVDGICDDVEALKQAIFLILNTERYEHLIYSRNYGVELNDLIGEPISYVIPELERRITEALIQDDRIENVDNFEFQNVKGKVHCKFTVYSKYGNIKAEKVVSV
complement(3305152..3305412)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03085; phage(gi640884882)     6.10e-49            ClostridioidesdifficileMSQELLQIIKKTAIDAVETSNPMQIAFGTIESLNPLVVKIEQKLSIGEIFLIQTETFKRYTDKKIGDKLVLIRMQGGQQYLILDRM
complement(3305426..3307318)       PHAGE_Clostr_CDMH1_NC_024144: putative cell wall hydrolase protein; CDIF27639_03086; phage(gi640884881)     0.0                 ClostridioidesdifficileMADELVLANDRDVRLVIAHWEDFYEPAVIDGVTWEIERRGTPSKLEFTIVMDDILQFCEGNSVRLYYKGTGVFYGYIFQKKRDKENHIKIVAYDQLRYFKNKDTYVYNNQTASELVKMLAKDFNLKYNVIEDTKYKISRVEENKTLFDMILTALDDTLREKKEMYVLYDDFGRITLKNVASMKLDTVMNNDVIEDFDYNSSIDSDTYTKIKLVRDNEETGKRDVYIAQDSTHMRSWGILQMFDTVDKNMSEAEIKQKCDILLKLYNKKTKSLSLKNVLGDIRVRAGCLVPVFLDLGDIDLQNYMLVEKVKHTFENNSHFMDLTLVDGDEFASYSSSSYSSGNTNNKDEKKNGPAQSITKKNTGKKVPAIFTAYYPGNNAMEGGKTDCNGKPLDVKSRTVAGPMNREGVKKTWYTDDFLKKHPVFEYGDKVKIILPGTAYDNKVYTVKDNGGRIYVETNGTYHIDILLANASECKKFGRKNGYIIIGGDEEQTYKVEGNNQSSTNNNSKEDKLISIAKSKLGCKYVYGATGPNTFDCSGFTQWCYKQIGIKIPRTVATQSKAGSAVDLKDRSKWKAGDLLCRVGGGSSNHVMMYIGNGQMIHSPQTGDVVKIQSVDSYRKGKAYTHVRRFI
complement(3307311..3308012)       PHAGE_Clostr_CDMH1_NC_024144: putative cell wall hydrolase/LysM protein; CDIF27639_03087; phage(gi640884880)     8.92e-139           ClostridioidesdifficileMAYDFYLDGVQLPITPGKLEIKTTNKNKTVDLINDGEVNILKTPGLSEISFEAEFTHNKLPFCRGQFRDVQFFLSKLELLKTDCKPFQFIVSREMGGKVLFNTNIKVSLEEYAISEDADNGSDTKVAIKLKQYRDYSTKKLVPATPEKTNYGRTPPPVMKPKEFRPDSSNKPNAKTYTVKAGDSLWSICQKQLGNGSLYKKVYELNKTMMDKANKGKKVPKYTIYKGQVLRLG
complement(3308028..3310385)       PHAGE_Clostr_CDMH1_NC_024144: putative tape measure protein; CDIF27639_03088; phage(gi640884879)     0.0                 ClostridioidesdifficileMATIQTSIRIFDGMTPAFRNMTNSINTTINSLERLQGRLNNPLNTGGIQASQQSLNNIENILTRIEQNIGKADEQQRRFNEDINKGVSNTDRLLGSVKKITGAYMSLKTLGGLGSLSDQMTNTNARLSLINDGQLSDGGLNKMIFQSAERSRASYLDTAQIVSRIGMNAGSAFSSTREIVSFAEQLNKKFIIAGASTQEMSSALLQLTQGLGSGVLRGEELNAVFESAPNIIKSIADYLDVDIGKIRGMASEGMLTADIVKNSLLAASAETNAQFEKMPLTIGQIFTSIKNNAVMIFGAIQKKIEDTVSSGGFRTFIVNVTDSLYVLGAVGYSVFNGFIDLLSSPTFQGFANMMIVGISLIAQGLGWIITQALSVANVFTQNWSIIAPIVYGIVGAFIAYKVVIYSVFLAQAIYTAITFTQCFVTALFAGELYVATKAMLIHQLMTLGVSRANVTLCATMIMVVSAVALVIAAIFVGVAIFNHFAKTGISATGVVIGAFYFLGACIYDVFAGAWNIVMAFTEFFVNSFNICIYGVQMLFYNLANFVINSMGDVGGSFDRCATTLANVFINGVNLAIKAVNGLIGLINKIPGVNIDTFGHGYTKNIDSVVGSLKNYQKTLKEPIKPQDWKAPYMDIKNPFDSFNKGYKVGQNLENKLKDAFDINKIAEKAKKDLGLDDLWDKKYGLGDGLGSAGLNSPLSDAAKGAKDTAGNTAKMAKTMDKSQEDLKYLRDIAEQEVINKYTGVNIKIDMNNTNNISKDTDLDGIVNVLTEKLNDAMVVSAEGVV
complement(3310452..3311234)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03089; phage(gi640884878)     4.03e-66            ClostridioidesdifficileMGLFGGKEPCSICGGKGKNKVLENEYLCNNCFINFTIFSRERLKATSAMQVLADHEGIRKFINFSKTNRELLAKFVETNRINKFVSIDEDNNFIKISDIRKGGDVIENVYAIDEIMQFELLEDGESIVSGGLGRAVVGGALFGATGAIVGGITGKKTTRKVVDTFKIKITFNNINNPLEYVNLINTKTKTNSSIYQNACNEAQEILSVLSIIIKNNDKTDNTQSKTSDSIEQVKGLKELLDLGAITEDEFNTKKKELLNL
complement(3312187..3312363)       hypothetical protein; CDIF27639_03090                                                N/A                 ClostridioidesdifficileMIEDLLNEYNLKTDEDVEYFVKFANALYELKQNSEEKFQEYAEILRGILREQEERKNK
complement(3312420..3313223)       PHAGE_Clostr_CDMH1_NC_024144: putative anti-repressor protein; CDIF27639_03091; phage(gi640884877)     1.23e-77            ClostridioidesdifficileMNDLQIFKSEDFGEIRTVDIDNEIWFVGKDIAEALGYSNTREALKTHIDNDDIAEVVIHDGSQNRNMKITNESGLYSLIFGSKLETAKNFKNWVTKEVLPAIRQHGAYITNNADPQALREKANEIESLDTVNKTIEILTPFLDNAGIDEKAKLLTAKTIYKKAGIELPLEIEEKEHFFDTKQIATKLNMYSKSNKPAFHAIGEIIKKLDIQDNEKLVVLESKRGWSGSVNKYSQSVIDKIRHWIGENNKPAKIQGEKKNFHVVYKIE
complement(3313352..3313522)       PHAGE_Clostr_phiCD211_NC_029048: hypothetical protein; CDIF27639_03092; phage(gi981220865)     5.16e-06            ClostridioidesdifficileMSPKKIGRPVVGSPKTNDIKVRVDDETNEKLDEYCKKNNLTKAEAIRQGIHLLLEK
complement(3314315..3314491)       hypothetical protein; CDIF27639_03093                                                N/A                 ClostridioidesdifficileMRESLLNEYNLKTDEDVEYFVKFANALYELKQNSEEKFQEYAEILRGILREQEERKNK
complement(3314546..3315412)       PHAGE_Clostr_CDMH1_NC_024144: putative anti-repressor protein; CDIF27639_03094; phage(gi640884877)     6.62e-168           ClostridioidesdifficileMKNLIVKEFNGSQIYTFMWKEKSCWIANQIVGLFDYADVSKTIQDCIKAEDFGIEQEYDVLKGNEFNDFVTTLNVVANNIISNKARSITIFYEDGLYGFLQYTDKPIGVQFRKWLRREVLPSIRQTGAYITNNANPEKLREKASEIEKLQLAYNSTSMLKELLDGAGFDNKSKLLTAKTLYKKAGIDLPIEINEEEHYFDTKQIASKLKIYSKSNKPAQMAVCEIIKKIKLEENEVKGVWETNGSWTGTVNKYTKSVIDKVRTWIEENNRPTKIQGEKKNFHVVYKIE
complement(3317254..3317415)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03095; phage(gi640884875)     5.86e-31            ClostridioidesdifficileMDNFLLSILASLIASLIGYIVCRCIKNVKSHSTRGKSKSGWELGFKIKFRKFK
complement(3317736..3318176)       PHAGE_Clostr_CDMH1_NC_024144: conserved hypothetical protein (XkdN-like); CDIF27639_03096; phage(gi640884874)     5.23e-105           ClostridioidesdifficileMGDLNAFLSQNAIKVENRKYVASERFIGEDGKPIEWELKAIDSDRDRQLRKDSAIRVPVLNKKGKSTGQYTSETDFNTYTLKLCVETIVFPDLHDAELQNSYGVMGAEELLTTMLTPGEYTDLSSEVGEVNGFDRTFEDKVEEAKN
complement(3318181..3318537)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03097; phage(gi640884873)     7.13e-53            ClostridioidesdifficileMEISRKVRYSKWYGIRHTFINYRCVFFIYTNKEMVKIKDKYEIKDSIYFDYSKKRPIEECVGEMYRKVGLFLVDIADKLALDTIEGSSLKPITIKIQIDEDGIATIEKETKYLVMEVE
complement(3318492..3318962)       PHAGE_Clostr_CDMH1_NC_024144: putative core tail protein; CDIF27639_03098; phage(gi640884872)     5.63e-112           ClostridioidesdifficileMAQQIKARDTISASKAECFVTIKGKRYNFMQAINLEAKMEKNKSEIPILGSTTKGNKSTGSKYSGNATFYYNTSIFRELLYEYKETGEDIYFDIQITNEDPTSSVGRQTIILEDCNMDSGIIAKFDADGEYLDEDMDFTFENWKLVEKFDIANGME
complement(3318987..3320297)       PHAGE_Clostr_CDMH1_NC_024144: putative tail sheath protein; CDIF27639_03099; phage(gi640884871)     0.0                 ClostridioidesdifficileMALGGGTFVTQNKVLPGAYINFVSATRATSSLSDRGIVAIPLELDWGIDEDVFQVTSDDFEKYSVKYFGYDYTHEKLKGLRDLFKNIRLGYFYKLNKGVKASCTIATAKYSGIRGNDLKVTVTTNIDDNAKFDVVTLLDNKKVDTQIAKVITDLQDNDYITWKKDATLEASAGLVFTGGANGEAVTGAEYQAFLDKIESYSFNALGCLATTTEIKSLFVEFTKRMRDKVGAKFQTVLYKKSDADYEGVVSVENKIKDKDLVESSLIYWATGAIAGCDINKSNTNKRYDGEFDVDVNYTQIQLEEALKTGKFIFHKVGDEVHVLEDINTFVSFTDEKNDDFSSNQSIRVLDQIANDIATLFNTKYLGEVPNDKSGRISFWNDVVKHHEQLQNMRAIEDFKADDVSVEPGSDKKTVVVSDAVKVISAMSKLYMTVSVS
complement(3320298..3320483)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03100; phage(gi640884870)     2.05e-29            ClostridioidesdifficileMIILNKTLSKEDNYKFTKEQIVNSKKYVNRKDLLNAILKENDLYSFSEVEDRINKFMKGVS
complement(3320467..3320904)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03101; phage(gi640884869)     6.81e-96            ClostridioidesdifficileMLNNIIDGISVKLDKSFGEKYTIYSEDVEQGINEPCFFIVPLNPSKTPYPSGRELKKNSFDVHYFPHSEDKNFEINEIAEMLLEELEYIEIDGDLVRGTNMNFEIIDNVLHFFVDYNYFTIKSNDTDKMDTVELFGGLKRGDNFE
complement(3320897..3321322)       PHAGE_Clostr_CDMH1_NC_024144: putative tail protein; CDIF27639_03102; phage(gi640884868)     6.96e-97            ClostridioidesdifficileMARWGSVDFREFKRVCKKMEKLTKIDLDKFCKDAARELAARLLGKVIRRTPVDTGFLRQGWSGVAYARSLPVYKQGNNYIIEVINPTEYASYVEYGHRTKGGKGWVKGQHFLTISEMELQGQVDKIIEKKLLILLKGVFDA
complement(3321322..3321669)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03103; phage(gi640884867)     1.12e-70            ClostridioidesdifficileMIDKTRKAIEMLYRDKCTIVEYQPVKDPVTKRTNNKEVIVLENQPCKISYKTITSTTDEKVAKLVQTIKLFISPDIEIKAGSKLIINNKEYVRSGESAMYPNHQEIILELFKDKA
complement(3321669..3322013)       PHAGE_Clostr_phiCT9441A_NC_029022: head-tail connector; CDIF27639_03104; phage(gi971821686)     4.63e-54            ClostridioidesdifficileMEVKRLKKLLGFSREDDSKDTILEFILEDVEEMVKNYCNVPTIPEQLNSTILRMAIDMYKNESLGSEDIALGSISSISEGDTSVSYRSSASEFKESLLKDYKAQLNRYRKIRWK
complement(3322024..3323043)       PHAGE_Brevib_Abouo_NC_029029: major capsid protein; CDIF27639_03105; phage(gi971767174)     4.68e-101           ClostridioidesdifficileMARVEELLSVQELINYTKTRKLKETMGDLLFPTQKIEGLEIKMIKGASNLPVSASVHAFDTESEIASREGANLSIAELALVKRKIKLDEKDIIVLEEPRNSQEETQMINQIFNDVDNLVSSVNTRIEAMRMEVLSTGELNINENGVKASLKYGTPTNHKETKTWSSGTPDILGDIYNMTDKIVVDTGFTPTRSLTSKTILNIILRDEKLRKAIFGVNSDKLLTLNELNTFLVSQSLPPIFTYDERYRVQGKDGKYTTKRFLDENKFILMPDGKMGDTFFGLTAEELELRKNPAIDISSVGNIIVEQYSTADPVAKWIKAVATALPSFPYADQVFMGTIN
complement(3323055..3323435)       PHAGE_Brevib_Abouo_NC_029029: hypothetical protein; CDIF27639_03106; phage(gi971767173)     3.07e-10            ClostridioidesdifficileMYFKEVNFNNTPEFLASQHYINFSKTALDTDVVADENGKKYVLAGSLLGESGKVVKITRGGSSGSYTYTLSEDPVGIVFSTVDVTYGPQPVASMVEGYVIIERLQGEYVKEAIETIKTKLPNIKFM
complement(3323451..3324023)       PHAGE_Clostr_CDMH1_NC_024144: putative minor structural protein; CDIF27639_03107; phage(gi640884864)     1.24e-07            ClostridioidesdifficileMKKGELIVLGLSEEDAKKVEAESLKELENYINKIEYEKVKEELKASKEAIEGFKGGMTKEQIEELKKGYETKLTAKDEEYQKKLKEKEQKEFDMALENELIKLNVHSTKAAKAELDLEKIKYENGTFTGLKEQTDTWLTQKSFLIKTGETKINYSPDNGNKNTLSRAENIAKEKNEEGSKNPYADAWSIK
complement(3324068..3324262)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03108; phage(gi640884863)     2.87e-29            ClostridioidesdifficileMCILTQVIVVVCVVQIVINCIANVNVGILCNKFKKENKANIDKVSDEILKRVMEELNKSLDESL
complement(3324334..3324495)       PHAGE_Strept_SM1_NC_004996: gp36; CDIF27639_03109; phage(gi32469467)                 1.95e-15            ClostridioidesdifficileMNCPVCGKDVDVFDICDNCNWQNSGPKETNYKGPNKMSLKEAKEAYEKGKKVI
complement(3324498..3325859)       PHAGE_Clostr_CDMH1_NC_024144: putative minor head protein; CDIF27639_03110; phage(gi640884861)     0.0                 ClostridioidesdifficileMKHKDYWKKRFEQLEEAQNNKSIKYYLELEKQYKLAMNSIEKDILAWYNRFAKNEGISLLEAKKPLNKRELEEFKWSVEEYIKYGKENAINQKWMKELENASARVHITRLEALKLQIQQQVEVLYGNELDGIDKLMRDIYTSGYYHTAFNVQQGVNVGWSLMSLDTNRINKIISKPWATDGLNFSERIWGKHRHALVNELHTKLTQSIIRGENPKNLVNDFAKRFNVSKSQTKNLIMTESAFFASASRKDCFSDLDVEKYEIIATLDLRTSNICRELDGKIFDMKDYQVGITAPPFHCRCRTTTAPWFEDEEGYRAARDENGKTYYVPSGMKYKEWYEKTFITDKKDDILSNKSWLKADFPTEKKFKKHVEKHLNEYGNITAEEYLSTARNLLSEQLSNDVEGFLSKDNFLFKYRKSTNDFAVGRADGKISTLFKPKEGYNYWLEQIKEYKEV
complement(3325849..3327252)       PHAGE_Clostr_phiCT9441A_NC_029022: SPP1 family portal protein; CDIF27639_03111; phage(gi971821679)     2.03e-167           ClostridioidesdifficileMELDVIKKLIEQTNSKHSNFVKKADEAEKYYKNENDIIRDRSPNNIGKVNTTNNPLRNADNRIPFNWFGFLVNQKISYLFTYPPTFDVGDDRVNSKITDILGDRYPKEAKTLGKNASIYSKAWLHIWVDDNNNFQYANIDPRQIRAVYSSDLNRKLLAVLREYKKTDDKGKEYVIYEYWTDECCYTYQNKDGNSNINGLEILNKFIEKNLDNKLETQTNVYRHNFGEVPFIEFLNNDLEVRDLDNVKHLIDVYDKVYSGFVNDIEDIQEVIFVLTNYGGADLTEFLKGLKEYKTIDLQSSGADDKSGLSTITINIPIEARDSLLKTTEKQIYVQGQGVDPKPENFANTSGVALKFLYTLLELKAGLMETEFRLGFAKLVRMICRHLGYSPKRVLQTWTRNMIQNDLELAEICSKSVGIISEKTNLKNHPLVDNAEEEEKQIKKEKEDSNQEYNNVIPNNQDGVIDET
complement(3327257..3328486)       PHAGE_Staphy_DW2_NC_024391: terminase large subunit; CDIF27639_03112; phage(gi658608067)     6.55e-177           ClostridioidesdifficileMIDELYHSKQLEVLNFALNNDYFMLINYGAKRTGKTIIDNDLFLLELRRVRKIANELGIKLPQYILAGADLGALQRNVLSELTNKYDIEFKFDKHNRFVLFGVQVCCFGHSKTNDLGRIRGMTSFGAYINEGTVANEEVFNEIKSRCSGEGARILVDTNPDQPEHWLKTNFVDKTDGKVIQSFHYKLDDNIFLSERYRANIKKSTPSGVFYDRDINGLWVSADGLVYQDFNKDIHYISKDKLNDINFVRYFAGVDWGYEHFGAIVVIGEDDKGNLYLLEEHSAQHKEIDYWIDKAKSIKEKYGNIKFYCDSARPEHLAAFKRNGIKAFNANKAVLSGVEAVAKRIKTNTLFVVHENVNLFRKEIFMYAWNKNTGEPIKKWDDALDALRYAIYTDSLGTGIKVLTPNGRR
complement(3328479..3329159)       PHAGE_Clostr_phiMMP02_NC_019421: terminase small subunit; CDIF27639_03113; phage(gi414090366)     5.04e-142           ClostridioidesdifficileMQDVKEKVKQDYIKGMKQKEISAKYDISLNTLKSWIKRYNWASEKKKGAPKNKRGAPIGNKNATGPPGNKNAEKFGFFSKYLPEETRELIQEISIKDKFDILWEQITIQYAAIIRAQKIMYVKDKEEMIKELKKHESTENGEKIEYEFQFAWDRQASFLNAQSRAMSELRSLIKQYDEMIHKDWNLATEEQRARVEVLKSKINNQESKEDKLDRYFDKLESVIKND
complement(3329219..3331252)       PHAGE_Clostr_CDMH1_NC_024144: putative signalling/NTPase protein; CDIF27639_03114; phage(gi640884941)     0.0                 ClostridioidesdifficileMEAEMYVQAAMMARKVVKVTGADKMIEDLVKKFLSNKVEEALGKQRSKKELKLIENKFNEYMERSYKNYIYMNTIVFRNQQKTIDDLYIPLTVSKRNVFDASCEEDVNDILINSYKDDFLPNYKKVLLIDQAGMGKSTIAKYLYLSSINESKGIPILIELRRLSQEKDIIDFIMNEINGISEHFDKEGVLKLIERGDFIFFFDGYDEIKKEYKTQVTEKLQNFVDKAGNNNFLMTSREEDELLSFGNFQSFYIYPLKKEEAYNLIKKYSDDKEEISKLLIKKIEEDKNFEIIKEFLENPLMVSLLCESFKYKQSIPHKKDAFYRQVYDALFETHDYSKRAGYYREKKSGLNLEEFHKILRTIGFITLTKGVSYSKEELINIVHNSKIKNRGIEFNENDLVYDLIHNVPIFIKDGIEYRWSHKSFQEYFAASYVCYDSDEKTTLLRKMFEGNKMNRYYNVLDFCYDIDYKSFMRSIILPTIEDLEKFFCKEYDDDVYKNFDEDELLLRKTMLFNHKKVYMYILSESEKNYFSNNGVSRLERNKYIKDKFPIEKEGISNGLIVDGLFAVHGFKKENIMNLLKLLKRKESNLVCHVIHSFFPNSRLIDTFNCGLHTFEDNVDNELNKKENFKLANDILGKYLELSATESRNVVFNYNECISIKREIEKEMEEEKSDIDFL
complement(3331392..3332069)       PHAGE_Clostr_CDMH1_NC_024144: putative regulatory protein; CDIF27639_03115; phage(gi640884940)     1.40e-164           ClostridioidesdifficileMLKILQEKNVKVMWSKNGEEVWFNANDVGEELGIVNIRDTLRNIDREYKKKFNESTVGDSYTRNFKDKLPNFGTTFVTEEAVYNMSFRSNKPEAKLFTKWVTKTLKQIRIHGYYIATEKDQEWLDIRTEGKKVRKDFTDEIQEFVYYATSQGSNKPQMYYKHFTELVRKKLGIPKGVKRDELNQSELFDIQALERIISMKLPKLIDKDMNYKEVYKKIKELIEMI
complement(3332633..3333139)       PHAGE_Clostr_phiMMP02_NC_019421: putative sigma factor; CDIF27639_03116; phage(gi414090440)     2.17e-116           ClostridioidesdifficileMSKTKKEFFNATKKQLSNYKQLSTNIIKLKNEIQMLKDNSVGDLMKGISYDSVKTGKTNKTSNVIEDAVVNISDLITEKEIELYEAEIIKSTIDLAIRNLKPIHRQIIELKYIDGLMWQEMVDIVHLEERQLSVRASQAISSISIALFGKKALIEQEPLFELLDYKLN
complement(3333244..3333453)       PHAGE_Clostr_phiMMP02_NC_019421: hypothetical protein; CDIF27639_03117; phage(gi414090439)     8.31e-41            ClostridioidesdifficileMLVEENIKVNNMKKFIYINGHRVYIRNLFKISAIYKENHYIREFKSECLSNNTLNAVIESSVRIGFGSK
complement(3333443..3333886)       PHAGE_Clostr_phiMMP02_NC_019421: RusA endonuclease; CDIF27639_03118; phage(gi414090438)     9.54e-104           ClostridioidesdifficileMKINFTIDGEPKAKARPRMSTANGKAYTPDQTVLYENWIRLMYNSTVKHFFEGNVKMTVICYFDITKKDREALQKNKVNTKAYKDAIDKVEGLIRPNKKPDLDNIIKSVADSLNGIAYKDDSQIVEVVSKKYYSDRPRVEVELEDVS
complement(3333909..3334715)       PHAGE_Clostr_phiCD119_NC_007917: methyltransferase; CDIF27639_03119; phage(gi90592706)     0.0                 ClostridioidesdifficileMNKVLNWPGAKWSMSKNIVGILPKHNIYLEPYFGSGAVFFNKKACNTEILNDADKQIVNLFKCIRDNPNELMNAIYFTPYARDEYMNCNILETDNDIEKARKFIIRTNMARGGIQNYKTGWKHTGPKESKKCFQKVVGKWNKLPKIILDTAIRLKDAEIENRDAVELIKKYNKTDCLVYADPPYLLKTRSQKMYNIEMETEEEHEELLKALLNHAGPVAISGYESDLYNCMLKNWNKSEFKSHAEQGKLRKEMLWTNFETTKQLSLFK
complement(3334844..3335083)       PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CDIF27639_03120; phage(gi90592705)     6.44e-53            ClostridioidesdifficileMNTLIYKYIVNEHRDEADELDRDYGEFKIFNGGKCFSGCGRNFYTLAKFKKMIVTCPHCGKKYQIKLFKNGKVNMRVVE
complement(3335097..3335282)       PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CDIF27639_03121; phage(gi90592704)     3.26e-37            ClostridioidesdifficileMVITEFKVTWQTTREWEKGNIYSSIFTDLEEARAFKKDEENMKENYNVKLLSRAIVEIEID
complement(3335361..3335828)       PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CDIF27639_03122; phage(gi90592703)     9.85e-109           ClostridioidesdifficileMNFKLISDIPDWTIEEQLAKIDEEVTELKEAILEGDKEHIMEEILDVCQSALTATQVLKIDDKLYEGINKHNRKLGYRGLSLHNIKLPYRIGGRIYIITEENIFYEAILLGVEIDKHDLSLKNYIVLAQTYDREFVGCFKEIYTSEELEAVYEGR
complement(3335831..3336202)       PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CDIF27639_03123; phage(gi90592702)     2.19e-83            ClostridioidesdifficileMFSIYKVKLKTKRTLEQVRNQSADFEYSEEGLKNTLRYYNLIDGLEVIVVKFKDEYSLAGCDEKDVEKIRDAYYILEQDEYFGCYINEYERFKKDWENGECGGEIGMMFSDDEVEIIEKLREG
complement(3336195..3336368)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03124; phage(gi640884932)     1.40e-20            ClostridioidesdifficileMTNKEMCKSNNLDEREVCKSFGKEICASCINDKGDCESKDCDIAYENWLEKEIVNYV
complement(3336365..3337090)       PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CDIF27639_03125; phage(gi90592700)     4.32e-169           ClostridioidesdifficileMKYVASFSGGKDSAAMLLLILEKRLLLDEIVFIDTGLEFKEIYDIIDDFEKRINFKITRIKAEKTFEEYFYTVNKQGKRKGQIWGFPYTLGAWCNSRLKLAPANKYFNSIGEHKRYIGIAFDEPSRYRRLEKNCIAPLYEAKMTEKDCLKYLEKKGFYYDIHHRFKRTGCYLCPKQSLDSLRTLRKYYPDLWAGMLKLDKDSPTTFRADGTTVHDLEKRFRNEDIENERQISFFQTEKVSI
complement(3337099..3338094)       PHAGE_Clostr_phiMMP03_NC_028959: hypothetical protein; CDIF27639_03126; phage(gi971820288)     0.0                 ClostridioidesdifficileMIMHKFIIHVLDKNSDTPILNDFEGRVNQDMVLFFQKKISKVSRDNDIRTAVFNDYSNNLIKKCCEQIIYDESSFLNNSKEIAAYLFDVMKLNATLESCDLSICLYSQKDEKKVAILKLDYNNSYTHSIEFKDDKFNIQMSKNEINIQETKAIKIGALIGLSGINDEYHLKVLDKDAEKEEANSKFVTEFLNATKVKDDKYKTKMFKAFVDSYIAHLYSDMKQGEDVRGMLLYMLREKQKLDINEFADKAIKDDLKDSFKDHIEEKGIESFNIDKKWVEKNLKNRHIKTDTGFEIKGKMEDFEDFMKYGIRHNGNGTVDIVIKNVNLYNEK
complement(3338106..3338315)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03127; phage(gi640884929)     5.77e-25            ClostridioidesdifficileMYEYILRWQIGLSLENRKIHYTYGSKEALRKKAKALAKDENIVLITIDKVDEVIKNTISEKIIERFKNL
complement(3338395..3339468)       PHAGE_Clostr_CDMH1_NC_024144: putative DNA methylase protein; CDIF27639_03128; phage(gi640884928)     0.0                 ClostridioidesdifficileMLTFLDLFAGIGGFRLGMEKAGHKCLGHCEYDKFANLSYNAMHKPKEDEWFERDIREIRTENIPRADVWCFGFPCQDISVAGKQFGFRGERSSLFFTVTKLIRELKEEDRPKYLLIENVKNLLSVNGGFDFLKVLVELDEIGYDAEWQVLNSKNFGVPQNRERIFIVGHFRGRSTRKVFPIERKSRKNLEQLNNPTHSTNRIYDAVGIARCIRSQAGGGGAKTGLYFIDLNKNSKVTINARCLKAKYNAGVTNRNCDNSGVLVNAVLTPDRVNKRQNGRRIKESGETMFTLTAQDKHGILKNGDIRRLTPKECFRLQGFPDKYYERAASVCSDSQLYKQAGNAVTANVVYEIAKRMG
complement(3339564..3339839)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03129; phage(gi640884927)     4.93e-56            ClostridioidesdifficileMEYKEYEDLKNRVESYEDLQGSAEFAGRVIENLEDVDCPIRIGFKFPNKEDYQKIDLDIAAKDSNSTFIRTELAKAFKEILSKYEMDMENM
complement(3339939..3340274)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03130; phage(gi640884926)     5.24e-74            ClostridioidesdifficileMSKVIQCDFCKSIFEENNLECIELYKKNVENEMINIDKHMCPDCYEKFVGEKVEKKITNFEKITRDKESLKDFLFECDAECSCCIYANKDDCYPTSCVTGCEKWLDMEVEL
complement(3340267..3340392)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03131; phage(gi640884925)     1.18e-21            ClostridioidesdifficileMNMLASVILVIGSFIAGRVYEYRLNLKECENCDNMGGFKNE
complement(3340392..3340565)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03132; phage(gi640884924)     1.37e-34            ClostridioidesdifficileMKLKDIIKLGEKYCYCPNCGNDKVGNNEGKLIVEEHTYYRECSCGFNILIDDRKDEI
complement(3340562..3340720)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03133; phage(gi640884923)     3.10e-16            ClostridioidesdifficileMKVQMQLTKDKEFFKVYVNSEEEELERLFFEFVSQMLAYKRKNKKVQGDIEK
complement(3340695..3340856)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03134; phage(gi640884922)     6.78e-26            ClostridioidesdifficileMVLANVEQVIKLAEKILNKKKCSVNKAIDIAIKILSRYEYEGMLRNESTNAVN
complement(3340825..3341205)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03135; phage(gi640884921)     2.15e-81            ClostridioidesdifficileMAKIWVDAGTFLEKTIDIEDMFELNLRKVRKANENKKIKLKLNESKFKKIRKKSTNDTKGKSIKVFNIETGEVRIFKSAKAASKYLKISADYASCLARENRVTREGWKAEYIQEVSDGISKCGTSN
complement(3341209..3341559)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03136; phage(gi640884920)     7.87e-74            ClostridioidesdifficileMLRKTRKNNISVCYQCRNEDISEDARYCKICGIGLRVMELVSVFNFETGEKELSFLTGKECLIDFGDLREGNMCKLFFENSELRIIGVENIYQDERGIFIEAGECSYEIIFKDLEW
complement(3341571..3341834)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03137; phage(gi640884919)     1.44e-51            ClostridioidesdifficileMKYECEKVFLECDKGSFEINDTRTEEVTFEGTEIDNPFKRVKYEGKATFEIVSGWEYLQREMLWFKILHLSAVVAKIMQYKMLGISK
complement(3341908..3342324)       PHAGE_Clostr_phiMMP02_NC_019421: single-strand DNA binding protein; CDIF27639_03138; phage(gi414090424)     8.32e-99            ClostridioidesdifficileMNTITLVGRLVADAELKYLPNSGTPKILFRVAVDRKYKDREGKKKVDFIPCEQLGKHVENLVQYLTKGKQIYAFGELNIDNYKDENGCWKSITKVNVNALELLSSKEDSNNHEKQQEYIPPGLDPQGFQAIDDDDIPF
complement(3342340..3342513)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF27639_03139; phage(gi640884916)     8.22e-34            ClostridioidesdifficileMARIYAQRSGSLNEQDRLELLRLLGKAGYTVKIAREKQNSKTTYTYFVEYTEEQEEK
complement(3342573..3343523)       PHAGE_Clostr_phiCD27_NC_011398: putative phage replication protein; CDIF27639_03140; phage(gi209901292)     0.0                 ClostridioidesdifficileMNFNNETYFHINFDDPFTRVPNTILDNENLSYSAVGVVTQMLRFQRSGSHKVYAKSLISYRKDSKTKVSNALKELMQEGFVIRTQIRDEKGQMKGYRYDIFDTPQNVNSESVEMTESQPCAVFPTPVKPEAGKTEVGETGSRQNRGREIGNIKENSIKKKIGLKENDVITTVIAEQSEKNKTVYIKKYYESYIGVITPNNFLQLLTYLDDGMEADVIIRAVDEAVGSGVKNYKYVKTILNNWIEAGVKTVLELTEYQNEFERKKKSKQEKKQSNNKAVNTHNVNKNKFANFNQTFTQYEEKELDEIIKKSQKEKFK
complement(3343532..3344122)       PHAGE_Clostr_CDMH1_NC_024144: putative essential recombination protein; CDIF27639_03141; phage(gi640884914)     2.03e-136           ClostridioidesdifficileMEINNIYIKLMDVRVKFSKLNLKKSGENKFANFKYFELADFLPQATGLLEEAKLCPIVTFTNEYATLTLINGENPSEQIVFTSPMRDLQLKGSNELQALGGIETYQTRYLYIQLLNITESDTFDATSGKNEAKSNSNNRILTDKQLSRLYAIASNANVNKESLKEKVFKRFGKEIKDLTKQEYDTICNAYEKQNQE
complement(3344132..3344641)       PHAGE_Clostr_CDMH1_NC_024144: conserved hypothetical protein (Gp157-like); CDIF27639_03142; phage(gi640884913)     3.14e-107           ClostridioidesdifficileMSTLYELTTDLLEIEEGLTEITGNEAEKLEEIKEIIKQEIQNKNTRIVSVIINIDSDINSIDLEIKRLQELKKVKKNNLDRLKSNIKECMELLGTKKIETVLGNISIRKSAGSLVIEDEEKIPAIYKTVEQVVKVDKNSIKDFIKKGHEVEGCRIEYGTTLTIPKAKKE
complement(3344727..3345044)       PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; CDIF27639_03143; phage(gi209901289)     1.76e-68            ClostridioidesdifficileMESLKIVKQYVEGQLNLSSLEIDKNKETYEILKNKSSRDMLDDINLNDALREVTVNERLKIFAESLLELLDTQIKIKESEESEDYKRLCMYLDEFGRDRPIDVQI
complement(3345144..3345371)       PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; CDIF27639_03144; phage(gi209901288)     1.67e-34            ClostridioidesdifficileMELLKVNFNLEKLKIGNVVSVSSKRFGFNINCIVVVATEEELNLAYYSKDKGCIEYQALIPEDIRYGDYILERLG
complement(3345346..3345534)       PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; CDIF27639_03145; phage(gi209901287)     1.16e-37            ClostridioidesdifficileMGKKSEYTVTTVGEPNLDALGETLAKILTEKFGVLITHTYIENYYVDKERGGDVDGAIESEL
complement(3345600..3346394)       PHAGE_Clostr_CDMH1_NC_024144: putative anti-repressor protein; CDIF27639_03146; phage(gi640884902)     3.20e-171           ClostridioidesdifficileMSNNLQVIERNNKRVLTTQQLADVYETDSKNISNNFNNNKDRFIEGKHYFLLQGDDLKNFKGIHTEYENLKFASKMYLWTERGANRHCKILDTDKAWEQFDNLEETYFKVKQQKPTCIEDVLIESLKEMKDLRLQVNQANNIALEAKTEVKTIKEVVSLNATDWRKDTQQLIAKIAKKQGGFEHINMLRRESYELLNNRFGVDLNRRLINKRRKMAEEGVSESKREKVNNLDVIQDDKKLIEGYVAIVKDMALKYGISSDLSKN
3346430..3346441                   attR                                                                                 N/A                 AGGTTTTCTTAT
complement(3346442..3346663)       PHAGE_Clostr_phiCD27_NC_011398: putative phage repressor; CDIF27639_03147; phage(gi209901282)     5.12e-46            ClostridioidesdifficileMNISKLKGKMVEKKYTQKKLAEELGMTVQALNAKLNNRSQFKIEEAVKISNILQIEEPGEIFFDNYIPKMQRN
3346817..3347272                   PHAGE_Clostr_phiCD27_NC_011398: putative phage repressor; CDIF27639_03148; phage(gi209901281)     5.73e-107           ClostridioidesdifficileMNTENDLKMLEITNRIKNKRLELNMSYQDLANKTGLSKSTLQRYETGAIKNIPLDKLEILAHALDESPAFIMGWNEDCKQIKIKENKLLSSFNALNDIGQNEAIKRVDELTQIGKYVNKNHIDTIAAHNEHLHEEGEIEKIYQDLDDMDNW
3347290..3347763                   PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; CDIF27639_03149; phage(gi209901280)     6.16e-111           ClostridioidesdifficileMNSYEKLLSEADDNNIIVREVPLISNSHGLYKNNRIALNKNTLNNISEKACVLAEELGHHYTSYGNILDLNKVENSKQEYKARLMAYNKLIGLKGIIDSFNAGCKTITEMAEYLDVTEKFLNEALECYKSKYGFSATLDNYVIFFEPRFSIMNANFL
3347828..3349186                   PHAGE_Clostr_phiCD27_NC_011398: putative phage site-specific recombinase; CDIF27639_03150; phage(gi209901279)     0.0                 ClostridioidesdifficileMLRVALYIRVSTEEQALNGDSIRTQIEALEQYSKENDFNIVGKYIDEGCSATNLKRPNLQRLLRDVEKDKVDLVLMTKIDRLSRGVKNYYKIMETLEKHKCDWKTILENYDSSTAAGRLHINIMLSVAENEAAQTSERIKFVFQDKLRRKEVISGTIPIGYKIENKHLVIDKEKKYIVKAIFDEYEKSGSVRTLIETINNLHGELYSYNKIKNILRNELYIGIYNKRGFYVEDYCEPIISKKQFKQIQRILEKNKKTTPNKNIHYHIFSGLLKCKECGYTLKGNSSNVGEKLYLSYRCSTFYLNKNCVHNVTHNEKHIENYLLTNLKPQLHKHMVKLEAQNEKIRRNKKSNKKDEKKKIMKKLDKIKDLYLEDLIDKETYRKDYEKLQSQLDNITEEQESQIIDTSHIKKFLDIDINEMYSDLSRVERRRFWLSIIDYIEIDNNKNITINFI
3362995..3363006                   attR                                                                                 N/A                 GATTTATTAAAA
