gi|00000000|ref|CP011946.1|  Xanthomonas campestris pv. campestris strain 17 genome. 4994426, gc%: 64.53%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1687752..1687763                   attL                                                                                 N/A                 GTTATGCCGCTT
complement(1697084..1698610)       PROPHAGE_Xantho_306: phage-related integrase; AAW18_07505; phage(gi21242262)         0.0                 XanthomonascampestrispvcampestrisMPKPYFLRRPAGLYVRFFVPTDLQALIGSRYLVRPVRLSLGDAARLAVARTAVALSEAFDWMRQGAGMQDDLLSQALAALQGNEARPYTIKVGGVELSANGADDHARLLDALKHLPLQQLASVKIAGPLLSERAAIHISEMRRVGRSAKNVLDTEHSLGLFVALVGDKPVEDYKTDDVRKFLDALEHYPSNATKKVVFAGLTPVEILSKARQGGHELLSMRTKEKHRDRIASFFNALANEDLISKAPHKAILNRAKSLTDEPSRDPFSQAELEALLELNAFTSWAKKYPHRWFGTLLGFATGARVNEVAQLYVDDIGKVGDFWGVHFRGAKPDQRLKNPHSSRFVPLPTSLIDAGFLVYVDEVKRAGFERLFPHLPYNAENGYGDALGDQFRAYAIKQGLTQRLKSFHCFRHTLSNSLVNEHGVSLPISQQITGHELTLPPGLKHYVDPPSVPARFSAIERFGPPLPLPAYTPGQFDRAFKQVRHMERRREQAAKNRTTKARITGWRN
complement(1698718..1699114)       tRNA                                                                                 N/A                 GGGGGTGCACTGGTTTCGACGGGGGTCGCGAAGTCGCTTGGCGCATGCCGAGGGGGCAGCTTTCCTCGTTAATCCAGCAGCAAACTTTTAGTTGCCAACGACGACAACTACGGTTCGGACTTCGCTATCGCCGCTTAATTGGCTTTAGTTGTAGTTCTACAGCCGCCTAAGGCGAACCCCCGAAACTACTTGTGCCCGTGCTCGTAGATGTAGGGTCATTATCACGGAACCGCCGGTAGTGGCTGCCTGTCAGCTATCGGTTAGATCAAGCAGGCTGGTTTTCAGGTGCGCTTTGCCCGCCGTGCTGCCTGGGAACGAGATCTAACGGAGGGATAAGCATGTAGTGCTGGGGATGGAGTGCTTCCGGACGGCGGTTCGATTCCGCCCACCTCCACCA
1699248..1701707                   PHAGE_Bacill_vB_BsuM_Goe3_NC_048652: hypothetical protein; AAW18_07510; phage(gi100011)     4.67e-20            XanthomonascampestrispvcampestrisMSTGKRPTGPRTTRAATKKAAKTAPPAKRRSGRQAAAKAETQEENGHRTRVQGKARTVIYIHGIGNKPPAEVLRCQWDKALFGRPMGERTRLAYWVNRERYPVPEPGSCDGRDVGPALNQSVQRALSTLGLVPGEQDLHALADALAQSEQERADLHQMLDELQAAPLAGGMQAKGPIDAINRVLLRLISAALLQDVHDLFFVPERAAQMRESLAQRLRAGGGPFVVVAHSQGSMIAYDVLRQLQADGCEVALFLTLGSPLGLPQVRSMFKRWTGTRKLPFPDCVRRWVNVAETRDPIALDPDLTDDIANAKGRFENIAAARLNPDWEHNPHSGSGYLAIAQVRAAVRQAVGVGFDQPVSNAVLIKDLSEQLEAHGADYRHEVLIELDRRVLGADPAGVRAQLITHMRQIAGHSTGLDGDALDEAIELEDSLQRLISARLTRFEIETLQSRYRALGFRRVWRDAGKRALIHVSGNVLHVDAARTAYRARGQQIGWAVLDTGIAAAHPHFFVPGERDNVVAQWDCTRRGAPKRLTRADGKRFTALDGHGHGTHIAGIIAGCCRAAVPDASGKPGELLEFAGMAPETQLYGFKVLDDAGNGRDSWMIKAVQHVADLNERAGELVIHGVNLSLGGYFDPESYGCGFTPLCNELRRLWRQGVLVVVAAGNEGLAWLMQNDGGTYPANMDLSISDPGNLEDAIVVGSVHKSSPHNYGVSYFSSRGPTADGRSKPDVVAPGEKILSAYYGFDPRDPSSLMVEMSGTSMAAPHVSGVLAGFLSARREFIGFPDRVKQLLLDTCTDLQRDRYVQGRGGPNLMRMLGET
complement(1701955..1702458)       PHAGE_Escher_500465_1_NC_049342: HNH endonuclease; AAW18_07515; phage(gi100046)      3.94e-58            XanthomonascampestrispvcampestrisMSKKPAKDKAKSATATKTIALNKRARHEYHLEERYEAGLALQGWEVKAIRAGRANIVDGYAYVRSGEIYLIGAQITPLIQASTHVIPVERRDRKLLLHRAEIDKVLTRVEREGYTLVPTALYWSSNKVKLEIALAKGKQSHDKRDAAKERDWQRDKQRVMRRHNRDA
1702519..1702950                   PHAGE_Escher_500465_1_NC_049342: primase; AAW18_07520; phage(gi100047)               8.10e-29            XanthomonascampestrispvcampestrisMPTIRRSALVEHSATRMFDLVNDVAAYPRRFGWCDAAHVLEEDDAHIVARLDLGLGSFRTWFTTENILERPERIVMHLRDGPFKRLEGLWEFQSLGDNACKVSLTLEVETSSRLLGPALALGFQGLADRMVNDFVRVADRGDV
1702953..1703249                   PHAGE_Escher_500465_1_NC_049342: exonuclease; AAW18_07525; phage(gi100048)           1.05e-12            XanthomonascampestrispvcampestrisMWVEVIVAWPDRYSAVQLEFAQGATVAEAVAASGFAGHQALVAQAVHGVIATPAQVLHDGDRVELLRPLLLDPKEARRRRAAPAKQAPGTQKKRNASP
complement(1703477..1703872)       PHAGE_Escher_500465_1_NC_049342: recombination protein; AAW18_07530; phage(gi100049)     1.67e-09            XanthomonascampestrispvcampestrisMRNLLLVAAVALSTAGCGIIYKQPIYQGNLIKQTAVEQLQVGQSKQQVSALLGTPSIPDPFHAQRWDYTSTQRVDRLARTDVKNFTVFFENEQVVRWEGDYFPAQDEQLAKSAPKQFGRNLARDKKKQRGR
1703976..1704386                   Fur family transcriptional regulator; AAW18_07535                                    N/A                 XanthomonascampestrispvcampestrisMETHDLRKVGLKVTHPRMRILELLEQKSNQHHLSAEDIYRQLLDHGDEIGLATVYRVLTQFEAAGLVLKHNFEGGQAVYELDRGGHHDHMVDVDTGHVIEFESEEIEALQRQIAAKHGYELEEHSLVLYVRKKRPR
complement(1705040..1706704)       PHAGE_Escher_500465_1_NC_049342: putative single-stranded DNA binding protein; AAW18_07540; phage(gi100050)     2.04e-114           XanthomonascampestrispvcampestrisMLRHLSIKDFAVVRATELEFGPGMTVVSGETGAGKSLMVDALGFLSGLRADSGVVRHGADRAELSAEFQLPAEHPGLTWLADNELDDDAQCQLRRIIRADGGSRAWINGRPVTSSQLSDLAARLVEIHGQHEHQALMARNSQLALLDAYARNSAQREQVRQASQRWQALLDERDALSAQGDVSDRIGFLEHQLAELEREDLDPAAIAALDTNHRRQAHATALIGACESVVQQLNGDEGPSALGLLQDSRHDLARVAEHEPRLGEVDALLDSAAIQIEEALALLDRVRDDLDADPTQFEAMERRLGRLHDLARKHRVSPDELAAHRDHLTAEVESLRGADERLQQLDKHIAAAIGVWQGAASVLSASRQSAAQALSAATTTLIGELGMGGGQFLIQLQPQETLRPDPNGAERVEFLVAANAGQPPRALRKVASGGELSRISLAIEVVALGLDSVPTMVFDEVDSGIGGAVADIVGQKLRALGEERQVLCVTHLPQVAAKGHAHYRVSKAPVDGMTQSAVELLGPQARQEELARMLGGVEVSKEARAAARKLLQSA
1706843..1707874                   HrcA family transcriptional regulator; AAW18_07545                                   N/A                 XanthomonascampestrispvcampestrisMLDPRARHLLRTLIARYIRDGEPVGSKTLAQHAGLDVSPATIRNILADLEDIGLLSSPHTSAGRVPTAHGYRVFVDSLVQMQPPGEEEVRRLRAELASSNGTQSLLGSASQMLSAMSHFVGVVSAPRREQFAFRHIDFVPLDARRVLAILVFADNEVQNRVIEPRRAYEPAELERVANYLNAQFAGRALSDIRASLLRELRLAKNEMEQLLAHSVDLASEALVPADADDMVMAGQTRLMGVQDLSDLDRLRELFEAFASKREILQLLERTIQAPGVRIFIGEETGMVSLDDVSLVTAPYTAGGQVLGVLGVIGPKRMAYDRVIPLVQTAAQMLGAAMEPPGTR
1707975..1708493                   PHAGE_Escher_500465_1_NC_049342: tail assembly protein; AAW18_07550; phage(gi100053)     1.23e-11            XanthomonascampestrispvcampestrisMNQDHPEFDSEDLSQNPPETDPLKAEIESLRSEIALVKADALRERADLENQRKRIARDVENARKFANEKLLGELLPVFDSLDAGLTAAGTEPSPLRDGLDLTYKQLLKVAADNGLTLLDPVGQPFNPDQHQAISQGEAEGIAPGHVVQVFQKGYLLNERLLRPALVVVAKHD
1714616..1714627                   attR                                                                                 N/A                 GTTATGCCGCTT

#### region 2 ####
2368655..2368927                   PHAGE_Xantho_Xf109_NC_043028: hypothetical protein; AAW18_10270; phage(gi100012)     7.95e-25            XanthomonascampestrispvcampestrisMDTQALALIGASALTVTVGLARLVAWILDRRAEAALRAHRAQVFIIESYADLVASSLDVDYVDPCVAAAEERAELMADATSGYWYGQSVA
2368924..2369106                   hypothetical protein; AAW18_10275                                                    N/A                 XanthomonascampestrispvcampestrisMSAVVVSHIDTYHMVIFGRRTRLFRLTVRRAGLVVEQSVHISRRAARDCASAAVEFYAHG
2369099..2370208                   PHAGE_Stenot_phiSMA9_NC_007189: phage replication protein; AAW18_10280; phage(gi70727679)     1.37e-20            XanthomonascampestrispvcampestrisMADGSLAVSGLPSSNRGVSEFRNSDGTLTVIIDWFSASVDLFAVLRQVGYLDRDDAEEVRQWSDACAENAMVIAINLFAFFFAGLGMELDKQAGPGSFYTWRVRVLDREGKHVGIIEFGGEECRRKDGTYTARIELTGAGCAMVSAARCGHAKRWLELRAKLESCAGRLTRVDTAADDLLGKYPLKLAQTWYTDGEFDNRGQRPKAQLIDDYDSGDGKTLYVGTKKSEKQLRVYEKGREQGDKESPWVRYEAQFKASNRKDLSLDILRDPAGYLLGAYPVLNFLQCVALRMDITKAAVDATWKSARRHIKRQYGATLNFIVRHCSTPDALHAVISTCTSHRLPAWATADVANQWPEIAGVNQTLQGVTP
2370205..2370501                   PHAGE_Stenot_phiSHP2_NC_015586: single-stranded DNA binding protein; AAW18_10285; phage(gi363542403)     6.03e-39            XanthomonascampestrispvcampestrisMSGIKVTVLSAEVDERGGTFKDDEGKDREYTTRKQKAKLEAGGFAYPLDVRLEKGQAAYQPGEYELDLEAMVTVNKGAINYSKFHVLRAVKAHARVAA
2370505..2370756                   PHAGE_Stenot_phiSMA7_NC_021569: hypothetical protein; AAW18_10290; phage(gi514361135)     7.35e-15            XanthomonascampestrispvcampestrisMAMCVALQADGTLVPTGQSVGECSGYVLVSGSEYSVYALVQEAFAMPSQEDAVAWSTGCCGLVIVWFVLGRLAGSVAGMFNDR
2370784..2370912                   capsid protein; AAW18_10295                                                          N/A                 XanthomonascampestrispvcampestrisMGDILTGVSGAEAATAMIAAAAIIALVGFTKWGAKKVASFFG
2371541..2371837                   hypothetical protein; AAW18_10300                                                    N/A                 XanthomonascampestrispvcampestrisMVAMVVMVMAVVMAVVMAVVMAVATVVEMAVATVVVMVAEMAVVMVAETVAEMVTAMAMAMATRPVTAMAPRPAMVKAARVLPCQSSTRRAARLLSLC
2371831..2372070                   PHAGE_Stenot_phiSMA9_NC_007189: hypothetical protein; AAW18_10305; phage(gi70727684)     1.11e-15            XanthomonascampestrispvcampestrisMLSKFNTQVRATPMVGGITDFMTVPSGGSCPVFSLGASKWWNAMTINFHCGGDFLAFLRAAGWVILAIAAYAALRIAVT
2372081..2372401                   PHAGE_Stenot_phiSMA9_NC_007189: hypothetical protein; AAW18_10310; phage(gi70727683)     1.12e-27            XanthomonascampestrispvcampestrisMQAGWFNDLTAWLWRAVKMVWQAVVDFVGDLFVMWLEQSLSAILYVLTLLPMPDFMKGQSIGGMLGNAGSTILWFADVFKIGPALVMIGAAMVFYLLRRILTVGIW
2372403..2373725                   PHAGE_Stenot_phiSMA9_NC_007189: putative zonula occludens toxin; AAW18_10315; phage(gi70727682)     3.52e-167           XanthomonascampestrispvcampestrisMLVFNEGVPRAGKSYDAVKNHILPALKKGRRVFARLNGLRFDRIAKHLGIPESDVQQLLVLVDTKDVAKLFACTQDDSGKWCIPDEFKDALVVIDEVHEFYVNERKPLAPAVENFWALLGQNGGDAVIMTQWINRLHSAVKARIEKKNTFQKMTAIGMKGRYRVTYFHTTSPGKFEKVGGQTLKYDPSIFPLYDGYAPGAENTEVYEEGGKNVWAAMAVRAVIFIVVGGVGIYFFVHYFTKDRSDPSKPVAAASQTAKPAHVGAGLANGAPSVPIQPPPPDPLADLTQEQRYVAELAGKGRIRLAARARVGDQDRAWVQWIDDSNNVIEQLDLTQLRALGYSVSVVTYGVRLSAGKHIMVATAWPWTAPIREKDARLYNMAPDGSGGAAGVATAGSDGGGADRDQVRGGVIEYGPRTQGTFPDNKGYSSSTSTPATTLQM
complement(2374120..2374503)       PHAGE_Stenot_phiSMA9_NC_007189: hypothetical protein; AAW18_10320; phage(gi70727681)     6.98e-21            XanthomonascampestrispvcampestrisMKLDTYDRVDLTGPWAGFGFQGDRMFTPEGRDLHAADMRFWSLTCCIAREWSLMMSEERNARSENPQKPTATRTPGSRICNGANVIYLRDVLLKRREKRSSLVGGAGSADRAQVVRRTRGPRTPRRG
complement(2374625..2375275)       PHAGE_Xantho_Cf1c_NC_001396: hypothetical protein; AAW18_10325; phage(gi17975752)     1.71e-54            XanthomonascampestrispvcampestrisMTSGGRELVKWLALLFMTGDHTLKILHLGYVPVIAELGRVAFPLFALVFAYNLAQPGADVAKLIKRLFLWGLIATPIAAIAFNRALPLNILLSFALAAVCIRAIEERKWVVLAFCLLPAPYLVDYRWNGLAVVLGAWLFWRNPAGWRWPRAVSVVVLLVIPLVLLCSVNRTLWPLLALPIAGLAYLSWAIPRTGRAFYVYYCGHLVALTGLSYAMI
complement(2375404..2377197)       transmembrane repetitive protein; AAW18_10330                                        N/A                 XanthomonascampestrispvcampestrisMTTAADLLQALLARMPGKLILDRRTGLPYGWGIWMRGRLGTPARFDDDQLTDALLARPAPRPRDGMAGRLSPFQAFRSLWWQHWDPRPRDERPLHWGAVLGSALIHLGFIALLLWVVSVRWAPDDTKQGDEARVRLTYIGEGAAEQGGGEGEPAADAAPATAASGAQQAAASAVAASSAAASPASTSSTVAEPAEPAADVPDVAPEPAVAAAAEPSTPDIPQVRVQVPQVTLESPLQVTETPVPTTDFVVPPPPTITVAPRAIEPAAPQVRQREIQTVTERPQVRELQQPTAAVAVRAAAAPTVREREIVVPEQARVTAPTVRAREVVPTVRMPELAVRAAELPNVPDPAPQPTPAQTPPAQPAVVQTPSAAAVSISPAAPAPSSAPSPANQTNQQTAAQSAKPASAAAASSKPAASSGAGPKPVDRSGGWDVAANADDWSKSTRDRPGQATGADGKRDGMFNNDGSVRVAAGGEAGNGAGDRGPPGSDTDTWTRDQIAQGGTWLKRPPYGYTPTSLDKYWMPNQTLLQEWVRRGLKKIEIPIPGTTTKISCVVSLLQFGGGCGLSDPNLNDQPATARPPPDVPFKRELQEGNGAVR
complement(2377211..2377810)       PHAGE_Prochl_P_SSM2_NC_006883: NifU-like protein; AAW18_10335; phage(gi61806099)     2.41e-08            XanthomonascampestrispvcampestrisMIQISDKAQTYFRKLIEREGVPGMGVRLSAVDAGTPRADAKLEFAEPADLSGDEWAIDCDGFTLYVVAASVPWMDGAEIDYVTQSTGNQQLTIKAPKIKGEAPAESASMVERVRWVVENEINPQLASHGGRVAVQEVSAEGVVLLRFGGGCHGCGMADVTLKQGIEKTLMGRLPGVIAVRDATDHATGDAPYIPRDSAA
