gi|911842984|ref|CP012148.1|  Lactobacillus paracasei strain L9, complete genome. 3076437, gc%: 46.35%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
541268..541281                     attL                                                                                 N/A                 TTGCTATTTTTATG
complement(552290..553459)         PHAGE_Lactob_iA2_NC_028830: hypothetical protein; LPL9_0527; phage(gi971747651)      4.31e-82            LactobacillusparacaseiMATFRKRGKYWEYRVKYTDSAGKQLVASHGGYRLKSSAQDAAEAVEDDLKRGGDPSKQDVLLLDYWDQWAEAYRINGKSINTVYRYKLFRKHLKSRFDGRKLNSIRPIEWQKFINDFAAGKDRKEKTTRKRPRERSKDIVTKMNSYVRGMVKAAINERILFSDFTFGTKTSGVCSSGKVKVLDSRDFAKVKAIAIERASYRNIGALAVYIGSMTGMRISEVLALTWPDIDTKLCVIHVTRSWDHLYGTGFKPTKTDSSVRDIEISPSVIELLNKIHQEQAASYLRTGYRDEDQMIMRDPRHNVITDSACNKALHVIQNKAGIPEDKQITFHGLRHSHVSYLISKGVDIYYISKRLGHSDVTITMKVYGHLLDSQRKQEAHKAVLFMDQL
complement(553572..553832)         PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; LPL9_0528; phage(gi195661240)     1.43e-13            LactobacillusparacaseiMKPITVISYKFGEKTWKNFEGEPIKKYEHSVLLDISDTEVFTDKEKTELNDKIVVPFSRIREKRFIKDIPLSNVNEALNKKKAGRK
554255..554542                     hypothetical protein; LPL9_0529                                                      N/A                 LactobacillusparacaseiMPGSPLVEALKNKEYSEEKLVIIFDFNDKLISSGYANRLPGSDDPTQQIGLMTYGQDWTVKLAQKKYDESPQNSEQIIDFDRQLKIYIIGINPYS
complement(554526..554705)         hypothetical protein; LPL9_0530                                                      N/A                 LactobacillusparacaseiMEEKKLQKDNSDKAKSLPDKKSGLFFDRNVQNRSIKLVHKDPVPPKPKMPDSASSKNKD
complement(554955..555662)         PHAGE_Lister_A118_NC_003216: gp34; LPL9_0531; phage(gi16798817)                      6.60e-07            LactobacillusparacaseiMNLLPEDQVDAGQAYDGLGNSEIIDTAFENKIWQLSKFAALNQPVSVDIDGKVYAEIRQTKYFIGKIPNDKVKTFSALYLNDKVELWVSIHGGTYKQTSTRSDGSITVKTYRDPVTLKLIAEDQQPAKTLNNNSGEEWSEVGKKMYAAKRKPYCLNCKHQLKGERFCPNCGAKIIYPGEHQNGMPINSWEKVANGADKFSQSVDKTGKFFSDFGCSMTLGCTIPIIIIIILFGLI
555859..556779                     PHAGE_Staphy_phiPV83_NC_002486: transposase; LPL9_0532; phage(gi9635740)             3.58e-47            LactobacillusparacaseiMAIITLIERSQIELMQHHTIQYIAATLGRSRISIRHELHRCPEGDYCAIIAQDHADTCRHRCGRHSILTPKLKRMVTEKLNLGWSPEMVGYAVHCAPHTIYHWIYQRQVDFQPSQLFDHGKRHKRRQDLRSRYNQAVGTSIEIRSESANRRTEKGHLEMDTVRGGRGSKAAVLTIVDRVTRLMATTKLENLSQNAVLKGFARLMVDFPGPVRSVTVDHGKEFSCDQALTKRYRIPVYFCHAYHPNERGTNERFNRELRYYFPKGTQFDQVSETDIQQATALINNKPRKCLRWQTPVQAVSKPLSRW
complement(556876..557001)         PHAGE_Lactob_iLp84_NC_028783: toxin-antitoxin system; LPL9_0533; phage(gi971743093)     5.20e-07            LactobacillusparacaseiMYFADIPEESANIDQFMNDLAIPQWLEDSAVQCIERFYENY
complement(557291..557533)         PHAGE_Strept_PH10_NC_012756: hypothetical protein; LPL9_0534; phage(gi238821321)     2.24e-10            LactobacillusparacaseiMTPSTENVQKVADVLQVSVDYLLGNTDNPNPDNEGSKPVDLSGTNIFTYQGQPVRQDDWEIIQAILERRNNSSKKRDRHE
557888..558136                     PHAGE_Lactob_CL2_NC_028835: transcriptional regulator; LPL9_0535; phage(gi971748039)     1.08e-50            LactobacillusparacaseiMVNVQLNWTANRNDWKGYLLHLNLSQLDIAKFLGISDQVMAILVKKMTDGQGLTANQIDKDRWKRAIEYVKYKQSQQKKMTV
558178..558378                     PHAGE_Lactob_iA2_NC_028830: hypothetical protein; LPL9_0536; phage(gi971747660)      1.08e-15            LactobacillusparacaseiMIKPIDAIRNELPVVTSKTLDLFESAVSQELQKRNPKATFQVSILGMAVLGLLVATRLEEVSDINN
complement(558349..558729)         putative protein Ymh; LPL9_0537                                                      N/A                 LactobacillusparacaseiMKFCNEQFLQGDYFHAIFEASKGVVNRIQQLSGIQKDGNSLVSTVFSDKQPILVIKGNMLATETDRDIYSGLRNLLRTVIFLYRNPKAHTPKIYDPSSVDDAVQAFVIMSAAQTMLDSVVNVRDFL
559091..560011                     PHAGE_Staphy_phiPV83_NC_002486: transposase; LPL9_0538; phage(gi9635740)             3.58e-47            LactobacillusparacaseiMAIITLIERSQIELMQHHTIQYIAATLGRSRISIRHELHRCPEGDYCAIIAQDHADTCRHRCGRHSILTPKLKRMVTEKLNLGWSPEMVGYAVHCAPHTIYHWIYQRQVDFQPSQLFDHGKRHKRRQDLRSRYNQAVGTSIEIRSESANRRTEKGHLEMDTVRGGRGSKAAVLTIVDRVTRLMATTKLENLSQNAVLKGFARLMVDFPGPVRSVTVDHGKEFSCDQALTKRYRIPVYFCHAYHPNERGTNERFNRELRYYFPKGTQFDQVSETDIQQATALINNKPRKCLRWQTPVQAVSKPLSRW
560316..561056                     PHAGE_Lactob_PLE2_NC_031036: hypothetical protein; LPL9_0539; phage(gi100031)        8.91e-54            LactobacillusparacaseiMNEPQPIEQNGQRVLTTEQLAELYGTTVGVVQMNFKRNSNKFIEGKHFFKLKGEQLRAFKNEPTNCGFVGKNASALYLWTRRGAARHSKMLGTDQAWDMFDSLEENYFNPKTRLPQTPEEKLALTMEVATRTVKRIEKLDGRVTDLEEKALLAPGEYNYISKQVNRAVANYVDVHHCKLNAKQRSLFYRDINHGLNDYIGIKTRTQLRKKDFDKADDFIQNWTPSTATLMKAREISLLEDQQQKAI
complement(561229..561480)         hypothetical protein; LPL9_0540                                                      N/A                 LactobacillusparacaseiMVQVPYYDNPGGALAVTVELPHAANVYLVDQANFNAHQRGDHFTYFGGHYDESPVTIRVSGAGRWYLIAENGSGEQYRYTWSK
561546..561902                     PHAGE_Lactob_iA2_NC_028830: hypothetical protein; LPL9_0541; phage(gi971747661)      3.67e-06            LactobacillusparacaseiMPLLQVVEDDQISSKKYLAVEEEELAKMIEENQELKRKLAARGMWTLTTATSYVEGHNNTWVVNNILNVPRFHKFLQDTVVSYPPPGKKGYLFHPKPWLDFLDKWFPEISRSLREKGK
561987..562190                     hypothetical protein; LPL9_0542                                                      N/A                 LactobacillusparacaseiMNSPETKLNKKYSPIFGDGISVSANDVQMAVDGIVATLSRHTSNLAEAKAIVDLIDLDQYAELKLIK
complement(562173..562541)         hypothetical protein; LPL9_0543                                                      N/A                 LactobacillusparacaseiMIKNFGRTGATILSVKADPAIDSGQLKFENNPFELFSNQLIAPDQTYAAVISVKNSEIELKTRKFSLSITYSDEFGKKETKDFLLNADVATSFDHITPVPTKTDEVAKSIYITSAERLFNQF
563037..563213                     hypothetical protein; LPL9_0544                                                      N/A                 LactobacillusparacaseiMTDGEKIQDRLFLKDNFKKYMDILGQTSLDMIKFEADLMDVRQNIADQCFHEGGVDHE
563206..563952                     PHAGE_Lactob_iA2_NC_028830: DnaD domain-containing protein; LPL9_0545; phage(gi971747668)     1.31e-44            LactobacillusparacaseiMNEKPGYYAIIPAGVRYDKQLPQGAKLLYGEITALTNKNGYCWASNDYFAKLYSVSIGTIKSWLKCLEDNSYIRRVIKYKSGSKEVEQRFISLAPRSENLPPSVRKLTHPRSENCPENNTSINNTTTLGEPELINFWEKNGFGFISPKNREDLMYWVDDFKKIGSTDEQAVQVVKQAMSNAIDNNVRRYSYVNAILKNWESLRLTSLEAVTAYEAQRTQRQKSKSTSRQASTDVYQNQGDVQDEDLPW
563967..564791                     PHAGE_Lactob_iA2_NC_028830: DNA replication protein; LPL9_0546; phage(gi971747669)     6.58e-154           LactobacillusparacaseiMSNLETNQGRLAAIETFAERCPDCGSLLYRPKGLSKVTGKKMAGVCMNCGYKQPPTEPKNVTPDMEKEARKNRTVGYYLAYSVFSTDAIIAKDFNNFHTDGSLGQQQLKLFAVGLSNKICRNEVVHALIIGDTGVGKSHIANGILIDTQAKTGYRKTCLFIDWNALMQRLKSGMSANAQDVRMKNEKIMHEIGKADVVVIDDLGSERGSDFERQTADDVFRMREDKATIVTTNLHGQDLNKRYGERTMSRMAKHGQGNSFGVKGILDQRKEALP
565356..565778                     PHAGE_Entero_EFC_1_NC_025453: replication terminator protein; LPL9_0547; phage(gi725950528)     5.69e-21            LactobacillusparacaseiMDKLNLNLNELADGAIKEKLTKALAQVTNNILDPNTDQSKARKVTIALNFKPDDSGVVKLTTDVKTTLVPDISVTTNVLLGRGEDGYMEMNELKSGTRGQEYFDPDDSTLKDDKGIPIKDDKVTDAPIDFRKIKNAKEAN
565780..566517                     PHAGE_Entero_EFC_1_NC_025453: hypothetical protein; LPL9_0548; phage(gi725950529)     4.49e-59            LactobacillusparacaseiMTTEADALKFTAEQAVTANGKRIIETKNRQFLINGNGDIREFRPNDGANEALQVHTLTAVVDYIGKVSERSASPLIVQVVDENSVFVLGELDDFGNREVLIKAKAMHPCYPYGQWLDSESFIIALQAQFMTTEDGKVLLKFVGNLKDESAQTMVDDGVSLVATARSGVASVGKVVVPNPISLRPYRTFLEVEQQESDFVFRMHEGPKLALFSADGDAWRNTAIDLVAEYLSEKLVKFSKHVTGLA
complement(566770..566895)         hypothetical protein; LPL9_0549                                                      N/A                 LactobacillusparacaseiMNSFHFPLSQLAHAHIEATAMSKMTAIIALLPAYVRTSDNN
567012..567932                     PHAGE_Staphy_phiPV83_NC_002486: transposase; LPL9_0550; phage(gi9635740)             3.58e-47            LactobacillusparacaseiMAIITLIERSQIELMQHHTIQYIAATLGRSRISIRHELHRCPEGDYCAIIAQDHADTCRHRCGRHSILTPKLKRMVTEKLNLGWSPEMVGYAVHCAPHTIYHWIYQRQVDFQPSQLFDHGKRHKRRQDLRSRYNQAVGTSIEIRSESANRRTEKGHLEMDTVRGGRGSKAAVLTIVDRVTRLMATTKLENLSQNAVLKGFARLMVDFPGPVRSVTVDHGKEFSCDQALTKRYRIPVYFCHAYHPNERGTNERFNRELRYYFPKGTQFDQVSETDIQQATALINNKPRKCLRWQTPVQAVSKPLSRW
580293..580306                     attR                                                                                 N/A                 TTGCTATTTTTATG

#### region 2 ####
complement(570139..571059)         PHAGE_Staphy_phiPV83_NC_002486: transposase; LPL9_0552; phage(gi9635740)             3.58e-47            LactobacillusparacaseiMAIITLIERSQIELMQHHTIQYIAATLGRSRISIRHELHRCPEGDYCAIIAQDHADTCRHRCGRHSILTPKLKRMVTEKLNLGWSPEMVGYAVHCAPHTIYHWIYQRQVDFQPSQLFDHGKRHKRRQDLRSRYNQAVGTSIEIRSESANRRTEKGHLEMDTVRGGRGSKAAVLTIVDRVTRLMATTKLENLSQNAVLKGFARLMVDFPGPVRSVTVDHGKEFSCDQALTKRYRIPVYFCHAYHPNERGTNERFNRELRYYFPKGTQFDQVSETDIQQATALINNKPRKCLRWQTPVQAVSKPLSRW
571704..572702                     PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; LPL9_0553; phage(gi588498272)     8.90e-71            LactobacillusparacaseiMSPYTHLTLIDRESILLGISTGKTLDTIAKEIGRSKSTVSREIARNGGWRSYSAATAQDRYRRVRLASRRPRILDRPGTRDAVIRYITVLHWSPEQIAGRLSLEGSPIRISYSTIYRGIYLDNLGVPLKSHGARGLPRLLRHRGKTRKIKGTINERRGRFNDLPSIHDRPRSAENRSWVGHWEGDTVRGKTGHSALVTLVDRKSRYLLSKRTANAKADTVRDVMIELLGALPANRVRTVTPDRGREFARYRELAERLNTKVFFPDPHAPQQRGTNENTNGLIREYFPKNTDLDLQSDQEIETYIEQLNNRPRKVLGWKTPSEVFMGKKLHLS
complement(572898..573116)         PHAGE_Lactob_LF1_NC_019486: hypothetical protein; LPL9_0554; phage(gi418489439)      1.07e-12            LactobacillusparacaseiMSLDGKVDSTKDKISGKAKEVEGKVTGDKARETQGKAEGILGKAKEKLDDAKDAVKDTVDDVKSKLSTDKKD
573539..574369                     PHAGE_Lactob_PL_1_NC_022757: hypothetical protein; LPL9_0555; phage(gi557308044)     0.0                 LactobacillusparacaseiMQWTDEQIGDIRKLASEGFTRRETADKLGISYDALQGKARRLGIEFQKPLKNEYDSDGTNRETPSADKKVALNADGSQTVTALMRLKHEPNKDPRTLMELCGYDPDKFEMVLGDYKVYEQHSTEDGTVPQYSIHIRVKPKQGLSINEMAEAFNDKIIPVNYGMKKSGDRNLVIPLPDLHFGWTTFADLKDMVSQLREIIMDGYNEIVIEQLGDLFHSDQIHVTQTVRGTQLDHANMRQAFHDAVKLFDQIIPLAIEYSNHVSMTAIWQPTGAVHTC
574384..574662                     PHAGE_Lactob_CL2_NC_028835: GcrA cell cycle regulator; LPL9_0556; phage(gi971748068)     3.36e-61            LactobacillusparacaseiMLAHGDVAKNKLTGLFPFEYKKIFNMAKTYELHSGHYHSERFKDDRGIMWRQLGTAKPNDPYEIKNGFTTGKHLLYAFVYDDTRLRCTYELN
575125..575436                     PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; LPL9_0557; phage(gi48697273)     2.07e-09            LactobacillusparacaseiMTNTAIRYTPEFKQTLIDLHEKGHSFKELHEEYGPSLDTIRKWVQAATVIAIDHQGTAVTNEQFKQLQKENRRLREELDILKRAAVLLAKRWIYSFLGRQANN
575466..576194                     PHAGE_Bacter_Diva_NC_028788: transposase; LPL9_0558; phage(gi971743568)              1.55e-39            LactobacillusparacaseiMGRKGSRYTLEEKLFYIGLVREGGWAPWAVQREYGVRHNQVRQWLERFEATGVDGLKPRSVHQKYAEEFKLEIVQKYLAGHTSYPVLAREYGIPDNSVIVRWVSLYTSGQPLQTTGRARPMKDGRKTTQIERIEIAQWTIANDYNYGAAMQQFKISYGQVYAWVKKFKQGGESALEDRRGKAKKDNGQLTEIERLKLENKRLQARLVHVSTEAAVLKKLQELERRNAGQTNNIRPFNNLHKK
576239..577069                     PHAGE_Bacter_Diva_NC_028788: transposase; LPL9_0559; phage(gi971743567)              2.67e-28            LactobacillusparacaseiMMGVSRAAYYKWTHRKVTVHEQENQAIRDYIIELEEKNHYVFGVKRLMTYINAETQYHVSHGRVRRIMRLAGIRASIRVAKRDRQVEKKAFLLVNKLYTVNMGHAFHPVAPNVVWVTDCSEITYGKDNKQRLRLSAVKDLHDHSVIAWCVAPTETADLATKTMKLAIENNDGIKPDTVHSDQGTAYTSSTYNTFLAGEGITHSMSRPGTPGDNSPMESLWRHLKIERFSFEHCLSELEMMKRIEAAINWYNNERRQETLNGMTPMTYRNHAVKKTA
577148..577978                     PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; LPL9_0560; phage(gi48697274)     6.38e-31            LactobacillusparacaseiMIQDQLSRGHRITVILRALRIPSSTYYDWLKWHPKSRNRRRIKLKELVQVLWQRRKFYGYVRIAKRIRKLLKCRLSDRTIWKVMRELGIQSTMYRKRSKKPTTTTDMPQKPNLMRHLADLSEVVTTDITYIQLINPKWVYLATAYDPKARKVLAWQVGQQMTQDLAVAPIQALIHQGYTFKMVHSDMGSQYTSRLFETTLTDAHLRHSYSRKGKPADNGRIEAYHSLLKREWVRLDQINYESILDVTESIARYNTFYNHDRETNGRGACKRKSAAA
complement(578515..578661)         hypothetical protein; LPL9_0561                                                      N/A                 LactobacillusparacaseiMFSLLSLTQKTPAISWHLAFIILALAKAASWNRTTIPSSGICCPVTHH
578660..578938                     hypothetical protein; LPL9_0562                                                      N/A                 LactobacillusparacaseiMAEPVGIWLHDRNLKLISKDHDALSYRVRASWVKDHADYPIKPGMTVVIGNIKPPNQLKNVLVLKVGSAELKRDGSLVISGERIKSVPKNLI
578950..579216                     hypothetical protein; LPL9_0563                                                      N/A                 LactobacillusparacaseiMFNLVLQTKDIKEAKRKNGLLEIRFPHPKEKALMLKLRHAVLSIETGWPILPDTTCIGEIVRVLPSKDRVIVAYVRPQNGFQRFVESH
579235..579411                     hypothetical protein; LPL9_0564                                                      N/A                 LactobacillusparacaseiMAISKAQMNNQKQMLTEILKQQNLAYEDWLYQRMTDEIESHRKLILQALKNLNMKEGH
579413..579640                     hypothetical protein; LPL9_0565                                                      N/A                 LactobacillusparacaseiMQGKVIALLSAILGFIIAIAGGYAAVKFGLMGIAHMTKDQQKIREARDGMTNVAIGLIVVIFASAAVAWLQGLAG
579683..580924                     hypothetical protein; LPL9_0566                                                      N/A                 LactobacillusparacaseiMYAKFECSRKLRQFLKKKRQLSLSEAEKMISAADDYAIQHHFKEDVNFKIIGQDGIEYEDNLPIGTGQGWLHNLLLILDHAYQTVLSDQSPEAFKAFSDRVRQELTIEEQPKAVQETLPVVARQEKAHHLKPIVSKEEEAVRKAESSAPAAAKQKPQKSKPVPLRRQARKKPMWQFPQLKRPKIRLSAQIIKRFVLAAATILVVAIFMLFLMRPKPVPSYQTLIQNASYVQAAKLYPSKHSDIEARLVKDNDEKSLAAFVQKYPSNNGRFDLAYMQKKFSTVISVSQDADLTAVRKVKLAISYIYQNQPENALTINSEIKSPQLQQLIFLALIHEGKLDQAATLAKSMNNKDADKVLEVGKTYQAAYEKAKADANNSKLSETDRKQALKDQHNWLALRKSLGGKSRYEESTNE
580902..582461                     PHAGE_Achole_L2_NC_001447: envelope protein; LPL9_0567; phage(gi9626524)             6.30e-07            LactobacillusparacaseiMKNQQTNNKKRHIIITTTAVALLGAGGLWAATQAHSNQQATHTSSYQTKMQKPKASKGSQAKKEKGKNTVNDIIDQALGDSNTSTSSEDQAFKSATNSVLDSNPIAAIAKTLDTPAAKASLAAATAAVEPPKALNDNSDDTASVKPLTNDTTETSQTDQGKTNDDGKTPIPVNPIEPVDPDKPVNPITPVNPDNPDNPVNPVDPVNPVNPVQPEQNTAPVLNVPEDQTVSLSHNGTFDVLNGVTASDKEDGDLTEAIKVTGNVDLSKEGTYTLTYSVTDSAGQTTSAKRVITVANDLPVISADDQTIEVGTSFDPLANVTASDVQDGDLTKDIKVTGNVDTTKLGTSQLTYSVSDHDGGQTTKTINITVYAKDASFSGLDALTVQQGSTPDLRKGVSVSDPYSATPSDFTVTACDTKTLGQKSVTYSYVDKWGHVTTQDRVINVVAEKPVFKGLQDQTIKLGDHFDPMNGVSATSTNGPVTISYVGEVNTQKAGRYTLTYTATDQNGQQAEQTIVVTVE

#### region 3 ####
634172..634183                     attL                                                                                 N/A                 CTTTTTGATTTG
complement(634257..634940)         PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; LPL9_0624; phage(gi985761246)     2.65e-76            LactobacillusparacaseiMNHFKGRHFQMDIILVAVGYYFRFSLSYRDIVELLRDRGITVHHTTVMRWVHHYGPIFKALWRRHQTAHAKSWRIDETYIRVKGRWAYLYRAIDNNGLTMDFELRKHRDYTASYHFLKHLLTTNGRPDRLVTDQYRATLKAVKHLIKQDYLSKSAHQCSKYRNNLIEQDHRFIKRHRVRSASFQSIRTASATLSGVEIVHAIRKRTRRELSLIGFSVVDELEALLAA
complement(634981..635109)         Mobile element protein; LPL9_0625                                                    N/A                 LactobacillusparacaseiMGAFGPQVKSITVDHGKEFANYQALEKDYQIKGFWCKFSSLT
635254..635814                     PROPHAGE_Staphy_N315: transposase; LPL9_0626; phage(gi15927655)                      6.97e-14            LactobacillusparacaseiMSQYDPTLSVLGIPDHNIKVAFVRHEYRGNGVRRRQYHVIDAELTYRLTRCPLCGFEALHPNGFYTAHVRVLNGVEMPIVIDLHKQRWRCHNCYHTVSAKTPLVQPNHTIAAHMTERIMKLAHERLPVKTIARIIGISASSVQRIIDQNLKLRPARRLPTRLCFDEFRSTHGMMSFMGLMEHPYEK
635864..635875                     attL                                                                                 N/A                 TCTACCGCTATT
complement(635911..636213)         arsenate reductase; LPL9_0627                                                        N/A                 LactobacillusparacaseiMHGLNPLAVKVMAEKGIDISQQTSKLIDPDYLLHSDLVVTLCGDARDRCPVTPPTVKKKHWPLPDPALAAGSEQDRIVVFRKVRDQIEQQIIDLAKVGNL
complement(636349..636684)         Arsenical resistance operon trans-acting repressor ArsD; LPL9_0628                   N/A                 LactobacillusparacaseiMKKIELFEPAMCCSTGVCGPSVDKELIQTTAIQRYVSVNAQGQAMFIRRNLAQNPDAFVRNPIVVQELKRQGINALPITLVDGQLVKTGEYPTINEFSSYLDMDLVAALVH
complement(636721..638016)         Arsenic efflux pump protein; LPL9_0629                                               N/A                 LactobacillusparacaseiMQVFFAVGIFLLTLLFVIWQPRGLSIGWTAVGGAILALLFGVVSFKDVGTVTGIVWNATLSFVAIILISLILDQIGFFEWAALHMARWANGHGIRMFILVTTLGAVVAALFANDGAALILTPIVLAMVRALHFDEKQVFPFIIASGFIADTTSLPMIVSNLVNIVSADFFGISFSAYALRMWIPDLFSLLGSIGILYLYFRKALPRKFDATQVAEPSSALKDQRLFKFSWVVLILLLIGYFSSGFLGIPVSFIALSIAAIFLIVGQRSSHVNAMAAIKGAPWNIVFFSIGMYVVVYGLQNVGLTTLLSGVITEIAKGGRFAATMGMGYLAALLSSLMNNMPTVMINALSIKGADVSGLIHHTLVYANIIGSDLGPKITPIGSLATLVWLHVLAQKGVKIKWGTYFKIGIVTTIPVLFITLCGLWLSLSIFG
complement(638059..638652)         Arsenical pump-driving ATPase; LPL9_0630                                             N/A                 LactobacillusparacaseiMHQNQKKSLKEYQNEVLTTAKKTMKSNDVDYVAEDLRSPCTQEIAVFRAFAELVAQNDSDVVVVDTAPTGHTLLLLNSTQSYAQEVAHTSGSVPQAVVNLLPRLQDPKQTEIVMVTLPEATPVYESIRLDDDLKRASLAHTWWVVNQSMLATQTTDPCLLARVQSEVKWIDQVKELSNNYFAVMQWQPNYEKTLLTV
638712..639395                     PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; LPL9_0631; phage(gi985761246)     4.02e-77            LactobacillusparacaseiMNHFKGRHFQKDIILVAVGYYFRFSLSYRDIVELLRDRGITVHHTTVMRWVHHYGPIFKALWRRHQTAHAKSWRIDETYIRVKGRWAYLYRAIDNNGLTMDFELRKHRDYTASYHFLKHLLTTNGRPDRLVTDQYRATLKAVKHLIKQDYLSKSAHQCSKYRNNLIEQDHRFIKRHRVRSASFQSIRTASATLSGVEIVHAIRKRTRRELSLIGFSVVDELEALLAA
639396..639456                     attL                                                                                 N/A                 CCTTCAACATAGGATCAATAGCTGGTTAGATGGTCATCTCTCAGACTGTTTGCACCAGATC
639949..640212                     Modification methylase EcoRI; LPL9_0632                                              N/A                 LactobacillusparacaseiMARTKEKLSRAKNVKNDEFYTQWSDIEKEVNAYIEYDKDVFRGKTILLPADDPFESNFFKYFATHNRKRKWGNQKWQMQFLTYKTLV
640173..640823                     PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; LPL9_0633; phage(gi371496158)        1.21e-23            LactobacillusparacaseiMADAIFDIQNVGLTVSRRTLLANISFKVAPGEFVTISGPSGSGKSTLLLLLATLLTPTEGQIIFSGQPQQEYETTAYRRMVSYCYQQPSLFGETVEDNLAFPFQIRQKPVNHDRMVKALADVNLPADMLTKNITELSGGEKQRVALIRNLIFTPKVLLLDEITTGLDAATKDTVHQVMANFTKQGVTIITVTHDESELAAADRLITIVDGRMEVTA
640820..641590                     seven transmembrane helix protein; LPL9_0634                                         N/A                 LactobacillusparacaseiMNHLIVTPTALFFAVALVTVAFFISLKEKIGLEKDLVIGVIRAVIQLTIVGYVLTYIISVNRAWLTLLMVAIIVFNAAWNARGRARGIPHAFVISLLAIAVATGVTIGLLVLAKAIAFVPSQIVPVSGMIASNAMVAIGLTYRSLNSQFHDQRQGLLERLALGATRYQTAITVVREAIRTGMSPTIDSAKTVGIVSLPGMMSGLIFAGVDPTKAIMYQIMVTFMLMAATSIGSTISCYLAYPQFFNGNMQLRTPHS
complement(641698..643020)         Xyloside transporter XynT; LPL9_0635                                                 N/A                 LactobacillusparacaseiMKSSAEWSTRWPERISYGLSDAADNLIFQMMTTYLLFFYTDVYGLTPSAVAILFVVARVADVVESFIIGIMIDHVHSRFGKSRPFFLWYSVPYVAFAILTFVTPNFSYGGKMIWAYVTYLGLGFLYTAVNLPITSILPTMSQNTRELTLLGVIRQFFGSSVQIIVAVFTLPLVWLFGHGNQQKGFLGTIIVFGIISLFLILNTFVHVRERFSNPHIAHQPVKVVLNMLAHNQPWIIMSIVIFMYWLVTAIKNQTTIYYFKYTLGDEGLVPWANGFTLAALIGVLMIIRLTDHQSKKKTMLHGILIALTGQAIIAAGVYGKWLLVLFAGVFINSIGNGIIIGLVSIMIADTIRYGASMGIQAEGILASTDDFGVNFGLGIGGLITAGLFHVSGYVANQSQNAATLSMINWNYVWIPLVIYAGMYLVLNLYDEQRIIDAIEK
complement(643219..643878)         PHAGE_Spirop_1_R8A2B_NC_001365: putative transposase; LPL9_0636; phage(gi9626114)     3.66e-27            LactobacillusparacaseiMVGYAVHCAPHTIYHWIYQRQVDFHPSQLFDHGKRHKRRQDLRSRYNQAVGTSIEIRSESANRRTEKGHLEMDTVRGGRGSKAAVLTIVDRVTRLMATTKLENLSQNAVLKGFARLMVDFPGPVRSVTVDHGKEFSCDQALTKRYRIPVYFCHAYHPNERGTNERFNRELRYYFPKGTQFDQVSETDIQQATALINNKPRKCLRWQTPVQAVSKPLSRW
complement(643954..644103)         Mobile element protein; LPL9_0637                                                    N/A                 LactobacillusparacaseiMAIITLVERSQIELMQHHTIQYIAATLAVLVFLLGMNFTVALKVITTPL
644130..644621                     PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; LPL9_0638; phage(gi985761246)     2.13e-31            LactobacillusparacaseiMLCKHHFSKNGQVFFHIFWVVTLIMQSRIDSNGLNMDFELRKHRDYTASYHFLKRLLTTNGRPDRLVTDQYRATLKAVKHLIKQDYLSKSAHQCSKYRNNLIEQDHRFIKRHRVRSASFQSIRTASATLSGVEIVHAIRKRTRRELSLIGFSVVDELEALLAA
644622..644682                     attR                                                                                 N/A                 CCTTCAACATAGGATCAATAGCTGGTTAGATGGTCATCTCTCAGACTGTTTGCACCAGATC
645573..645584                     attR                                                                                 N/A                 TCTACCGCTATT
645700..646167                     PROPHAGE_Xantho_33913: IS1480 transposase; LPL9_0639; phage(gi21231089)              2.13e-56            LactobacillusparacaseiMIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINGLPQAILVTRANVSDRSGALAMFSLASQTLELVQHVMVDGGYTGNDFADQVKLILNAKTTVAKRNELHMFTVLPQRWIVERSWRWLDKCRRLWKNCERALNSSLQMVVLTFLKIVLKR
646442..647974                     PHAGE_Bacill_G_NC_023719: gp243; LPL9_0640; phage(gi593777699)                       2.96e-05            LactobacillusparacaseiMADLWRTISERHGELLSALGQHIEISLIALMIAVVIAIPLAVWVQTHHKTAAVLLQVTGVLQTIPSLALLGLLIPFVGIGTLPAIIALVVYALLPIFQNTYIGLRDIDPSYEEAADAFGMSRLRKLFKVELPIALPVILSGVRTAMVMIIGTATLAALIGAGGLGTFILLGIDRNDAALTLMGALAAALLAIVFSWLLNVMQKVSWKISVGVVAVAVLGMVGSQVYTYVTAPKETITIAGKLGSEPDILINMYKELIQKADPDVGVTLKSNFGQTSFLYNALRTDKIGIYPEFSGTVLASLTKPSAAQQQQVTAGKDNYPLAKKLLAKQGLSYLKPMAYNNTYALVVKESFAKRYDLHTISDLGKIAPSIRAGFDLEFIDRQDGYKGIQSKYGLQFKVDSMDASLRYQALDRGQINLTDGYTTDAQLRQYHLVALQDDKGLFPIYRGAPLMRTAFAEKHPQLVAALNKLAGQITEKQMQTMNYAVSVKNEKAATVAHRYLVQHGLLKEVR
647974..648933                     PHAGE_Bacill_G_NC_023719: gp245; LPL9_0641; phage(gi593777701)                       3.84e-34            LactobacillusparacaseiMALISLEHVTKEYDGKPVVNDLSLKVDQGELFVLVGTSGSGKTTTLKMINRLVDPTSGVIEFADKPLTSYKMRDLRWDLGYVLQQIALFPTMTVAQNIAVIPEMKGWSRQKIRTATDELLTTVDLPPAEYRNRMPSELSGGQQQRIGILRALASRPKVVLMDEPFSALDPISRTQLQDMLLHLHRALKTTVIFVTHDMAEAMKLGDRIGVMRGGKLLQVDTPEEIATNPANDFVADLFKGAQANQGLQVTLSQLAPFAADVSARHAVGGNLTLAEALPLLDAHEALRVNSEHGAFVVNTHSVVAYLASAFVDQNTETKE
648939..650264                     glutathione reductase; LPL9_0642                                                     N/A                 LactobacillusparacaseiMAYDYGTIVIGGGPGGLAAAYGLAAKQKVLVVENDLWGGTCPNYGCDPKKMLYRGVEVKNAALRMNGFGISGTAKIDWPSLMAFKRSYTTGVPAGTLNGLTHAGITTLYGHAQLLGEHAVKVGSQNVTGEHIVIATGHTPRYPDIPGANLLKTSRDFLDLDQLPTSIAFIGAGYVSVELANIAAAAGADVHIIGHSDRLLRAFPKVATEALKPLLAKTGIHFHPNVELTKITPLGTMTHLHADNFDLNVDMAITAMGRIANVADLGLANAGIKADTRGIPVDDHLRTAVETIYAIGDVNLKPQPKLTPVAGFEGRYVANQILGDQAPISYSAIPTIVFGPTELAKVGVSLEAAEAAPDQYTVKHNETTHWYTYNRIQDPDAQVWTIVDKKTGRLAGAVVLASLAEDLINTFAAAIDAGEKPSDLNKIYAYPSAQSDLQYLF
complement(650315..651235)         PHAGE_Staphy_phiPV83_NC_002486: transposase; LPL9_0643; phage(gi9635740)             3.58e-47            LactobacillusparacaseiMAIITLIERSQIELMQHHTIQYIAATLGRSRISIRHELHRCPEGDYCAIIAQDHADTCRHRCGRHSILTPKLKRMVTEKLNLGWSPEMVGYAVHCAPHTIYHWIYQRQVDFQPSQLFDHGKRHKRRQDLRSRYNQAVGTSIEIRSESANRRTEKGHLEMDTVRGGRGSKAAVLTIVDRVTRLMATTKLENLSQNAVLKGFARLMVDFPGPVRSVTVDHGKEFSCDQALTKRYRIPVYFCHAYHPNERGTNERFNRELRYYFPKGTQFDQVSETDIQQATALINNKPRKCLRWQTPVQAVSKPLSRW
665632..665643                     attR                                                                                 N/A                 CTTTTTGATTTG

#### region 4 ####
1086644..1086656                   attL                                                                                 N/A                 TGGAGGTGAGGAG
1086644..1086656                   attL                                                                                 N/A                 TGGAGGTGAGGAG
complement(1086726..1087874)       PHAGE_Lactob_Lj928_NC_005354: putative integrase; LPL9_1071; phage(gi41179288)       6.99e-35            LactobacillusparacaseiMAIKKVKLKSGAVRYRVTVNAGLVAGKRKNIVRNVQSMQKARLLESKLKLDVANGLYDEEDTTPPVQTFSDLYNQWWPIYVQTVEGSTAYKTKQLFHNHLIPMFGSKTLTAIKTGSIQSAVSQWRETTTKAYKERFIYLKKILSFAVKMQYIEKNPADGVELPRGVGSGKSPVYWNNKQVARFLTCIDPNNDPEKYTMFLLMVSTGIRREELCALNVSDVNFKTSTLSINKAYATGLNGKESIKGTKSTAGMRTIPLTPKVTIQLKKWIALLDASKIISIRDDRPLFPSPQHFDRRLGINRPNKWLKDIIEANHLTPRITLHGLRKSFVTNMIRSGVDVSTVQRLAGHSTPDVTLRIYAGMNQSDAREGIDKLAEYMEQVTF
complement(1087973..1088674)       PHAGE_Brevib_Jimmer2_NC_041976: hypothetical protein; LPL9_1072; phage(gi100017)     2.20e-06            LactobacillusparacaseiMITIRLKEVSKEKGYTLTDISKATKLSMNTLSVLGRGESSGIQFDTLEKICSFLDVTPNDLIELSPDKYVVVMPVQRRINHQAIAYVYNEKDYKKMASNEGPMLKIDNNNEHLIVVTQMNESKDMVQFFMGFPMQRTDETKKRPLLTEEELSSTRDWLNRLDNSQKKSICEQAAYLYLKQFSKGNYPNSIFTAVISDDNSSSIIYPFWVGSKTGKLVDLQFRDGGPIRPDDLD
1088822..1089100                   hypothetical protein; LPL9_1073                                                      N/A                 LactobacillusparacaseiMQVQANLTMTPELKSELRNMVHEEIASTIQGKMVTTKIPEYLNLGESAAFLNISRGTLTKLINKGAIKLVPFGRAKRISKKQLIEFMASREV
1089168..1089389                   hypothetical protein; LPL9_1074                                                      N/A                 LactobacillusparacaseiMKLFSKEEMALDHELGNLIDDIKLNVHAIAEDSSVTVDGKYISNSELAVTTAKELLRVSEILKLYENEDDADD
1089494..1089691                   hypothetical protein; LPL9_1075                                                      N/A                 LactobacillusparacaseiMTMVKMVNSKFGWTWPQFVKADADCDRYWQAQKAEKRSLNEATKKSPRVAAQGEKRTSEKIYIPF
1089737..1090030                   hypothetical protein; LPL9_1076                                                      N/A                 LactobacillusparacaseiMMKNVSTTVKKPLDLSDSLYDLRKAKGALSALCDELDEFGISVCHFDKNHSHDNAALVALEALRDFDTWECLVFCARDIITDQITAIDSPETDEADK
1090027..1090215                   hypothetical protein; LPL9_1077                                                      N/A                 LactobacillusparacaseiMMKKDYYTTAQALLSDTSAMVNILRHQINNEQQSALADTVADMIIDARRLLLEGDAVDGRRA
1090190..1091011                   PHAGE_Lactoc_bIL310_NC_002669: hypothetical protein; LPL9_1078; phage(gi13095885)     7.02e-28            LactobacillusparacaseiMLSMVDVLKVALGYQQHGFAVYPLASGTRTPLNGSHGYKDATKDPEQAKKWWGEHPNYNIGLGLDGVLVFDIDMGHKSEVNGNETLAKLSADGRAGQIPSTYIETTPNGGLHIFFTYPKELKLTSRSDLFSKNGEKTGLDYIATGVPVFPSIRENGMYQPLKGHKITKLAPAPQWLLTEIQRVSHPIMSNYHGNPDSWFGHFINRLVDGSDEGNRNQWLASIAGSVFRSGADPDSCADLIQTINQRYVRPPLPNGELVKIINSISKREIARRS
1091015..1092607                   PHAGE_Entero_EFRM31_NC_015270: DNA primase; LPL9_1079; phage(gi327198106)            1.77e-35            LactobacillusparacaseiMKHTDSLKEELNKSPEFTQLKVISKSTLEPFDVNKYPEPQDKTEKGIRAYNKQLAAKLPNWLRVWFQSEQKDENDPKSVTIHRHIKVDFLAYGYHFMDKTRVESFPGLSEGAIYEPSKGTWRTFGKGEFTKTTESRTTKEMLKWGLYRESDITGARRFLQRISYNEEYGKRSPFDENPHPELVAFANGTYSILTNKMQESSADNYMLNAHEYAVDPDRDDCPETERLLAAMMGDAAITFEEFIGYMFYRSYRPFQAFLWLYGTGGEGKSTLIRRITNLIGRDNVSASKPADLANGDRRFETANLYGKEANIVADVGADYLKSTAVIKSLTGGDYIAAEFKGIQNFKFMNYAKLLFSANEMPAFSDHSSGFADRVTVIKMINGDTRHTHWWNQFDDTKMDEETPRFAMKCMHMFAKALKSGGLTKPDSVVNASQEWLDANDHFKEFLDQYAEINLEDDRGEASTVVTAEYKRFCQDNNYMDRTTTQAITKKLDAYGVKKVSSRRGFDNDTGSTRRYIGLRLTGSLINPRFN
1092928..1093263                   PHAGE_Lactob_phiAT3_NC_005893: putative head-tail joining protein; LPL9_1080; phage(gi48697266)     8.13e-19            LactobacillusparacaseiMKNYSIARLNKVAEIGKTVSRRTGAGINISTFETTGTLFYGSYNRTVTQTYQITGTDLADTISIVVRHTDAIDDSTQVKLNGTLFAIQSIAYDDDPNAFDVVTLKKTTKGA
1093268..1093453                   hypothetical protein; LPL9_1081                                                      N/A                 LactobacillusparacaseiMKLFEYTAYQGELNGVIDKFMMLHRWQVGFIRVFSAPDNMITVQLYYRDDKHETETAGVLS
1093989..1094459                   PHAGE_Staphy_phiPV83_NC_002486: phi PVL ORF 1 homologue; LPL9_1082; phage(gi9635714)     1.29e-19            LactobacillusparacaseiMGAPLKSITQMRGAMSKKKLADRRDMEESLFTYKELVDQPPTWLDEYAVTEWQRIVPLLKKDIPVSELDAALIASHCQAYSDIQKAAELVKEQGMMVETTDSVKANPAVKMKLDATNQMIRIDDLLGLSVYSRAKLAVKNETKKKPDDPFAELMSS
1094456..1096159                   PHAGE_Lactob_PL_1_NC_022757: terminase large subunit; LPL9_1083; phage(gi557307995)     1.18e-135           LactobacillusparacaseiMNYATEYTDKVLSGEIVACKKIKQAARRYRRDLKASKRKKNPWPYYFDEDFANKAIEFIELMPARDGSPLKLELFQKWLISELFGWRDKETGNRRYDRAYISMARKNGKSFLMADLGALYLLRENKPAMNREIVYTANSNAQAHLAFDMLSSGLRQVWKVSTSVRERLRINRNEIIDLPSNSRAVPLASDLHSLDGYQSDLAIIDEFALARTDEILRTLKSGQINSDNSLLAVISTTGPDLNGPMYKEYKFVSKVLTGREQADRYFIAIFEQDSKDEAFAPETWEKSNPLLANAERARTMRPSLQADVDLAAKQGTLRPILVKNFNMWQSARADSYISLDDWEKATIEPPETRDKDVYIGLDLSKSSDLTSISWLVPEDGYLYADSHSFVGTKYGLEEKIKRDGFDYIAGEQRGECSITKLDSGMIDYDDVLRFILDMIERNRWNVRAICYDPFAMGYLIPEFEKRNLPLFEVRQGVRTLSTPTTRFRDDLFNGKLKHPDNQLLAYAVNNAILKYDSNSNPMIDKAHNATKIDPIAALMNAYTIAMDQSKESEVADNGFYSSDDFSF
1096125..1096304                   hypothetical protein; LPL9_1084                                                      N/A                 LactobacillusparacaseiMVFIRAMTLVFNVQTVLLLLGLICMVVGIWWLFGFGVGMLAVGTALISVAVIINFNKGR
1096309..1097487                   PHAGE_Staphy_StB20_like_NC_028821: portal protein; LPL9_1085; phage(gi971746491)     3.60e-71            LactobacillusparacaseiMSFFTNDTTQPRDDNSDPFLDALVSMTSNDSGLYVGIGALRNSDVFTAVRVIASDLATNPIEYSDKRISVLLNKAPNDHMTAWGFKFALAANMLLNGNSFARVTKNPSGQVTGFELVPNSQMVVKQDDTTGIISYEYTPDSGRSQRLNASEVLHFKCFTQDGYKGLSPLYSLRDEVGVQKSGHALLKGFFNSGVQGTGILKVNKTQLDTKAKENIRHKFEAANSGDNALKTIILDNDMDYKQLEVNTDVLNLVNSSDWTTKQIAKAFGLPLDRLGIESEHSNAVQSNLVYLQNTLIQYFTCFTSEMDAKLSTGDNRFSFNTDKLFSADPATMQELAVKGLQGGVLTTNEARARLNLSPITGGDEIMASLNYTPLSNLVTYQDKQKGSASNEQ
1097477..1099033                   PHAGE_Entero_IME_EFm1_NC_024356: capsid protein; LPL9_1086; phage(gi658310465)       1.11e-49            LactobacillusparacaseiMNNDDVEKRLNPDADLTAADPTTADDSQDQDNPDTQQQDDTTSGPKKLSGYAVVFNSPSKDLGGFKEVVDPHAFDNVDLSDVYMVSNHDFSQVLASTKAGTLSLNVDDKGLQFEATLPDTTTANDAYNNVQAGNLSAMSFTFNAAPDGDTFTKDDSGQVIRTIKQVKSLFDVSLVAIPAYDDTNVQVDKRSYTEWLKTNTEQSEKGDKTMTEKTIIDNKEHTESRAYEDYIRSMGEQRDGLTTTTAGAVVPKEVIEDVWNLKESDYDLAKYVTVKQVGTPVGTYPIALTNNGVLATKAELADVPEIDATLFRGVDYKVATRAGKIYLSNELVEDSEVDIVAEVKNQLKKLVQNTDNSNIISILTGKTGTNDNFKHITGTGLDDIKQTFNIELDPALSLSVIVNQDAFNYLDTLKDSEGRYLLQPSITAPSGKQLFGAPVIVISNKVLPTDKAGTYRIIIGDFAQAIFLAQKNEVNTQWERFDSYSQGLAVVIRNDYEVVDPDAARIVDITPVAATPKA
1099089..1099382                   PHAGE_Entero_EFAP_1_NC_012419: head-tail joining protein; LPL9_1087; phage(gi225626391)     2.90e-15            LactobacillusparacaseiMTVTTNDIKNSLRVQTNTDDSLISNYLTAAQDYVHNAVDSTAAIDELQAYSQFDIAVAMLTEFWYQNRGAVTTASQEPPYSVVSMIQQLRGLFTENV
complement(1099839..1099979)       hypothetical protein; LPL9_1088                                                      N/A                 LactobacillusparacaseiMDALKAAFKFMVASTLIVGGVLVAGTVFAAKGIDNAGDKLQEKLHD
complement(1099995..1100243)       transglycosylase-associated protein; LPL9_1089                                       N/A                 LactobacillusparacaseiMHFLWALIVGAIIGAIAGAITSKGKSMGWFANIIAGLVGSAIGEGLLGHWGPQLAGMALIPSIIGAIIVVAVVSFFVGRSKD
1100486..1100498                   attR                                                                                 N/A                 TGGAGGTGAGGAG
complement(1100568..1101716)       PHAGE_Lactob_Lj928_NC_005354: putative integrase; LPL9_1090; phage(gi41179288)       6.99e-35            LactobacillusparacaseiMAIKKVKLKSGAVRYRVTVNAGLVAGKRKNIVRNVQSMQKARLLESKLKLDVANGLYDEEDTTPPVQTFSDLYNQWWPIYVQTVEGSTAYKTKQLFHNHLIPMFGSKTLTAIKTGSIQSAVSQWRETTTKAYKERFIYLKKILSFAVKMQYIEKNPADGVELPRGVGSGKSPVYWNNKQVARFLTCIDPNNDPEKYTMFLLMVSTGIRREELCALNVSDVNFKTSTLSINKAYATGLNGKESIKGTKSTAGMRTIPLTPKVTIQLKKWIALLDASKIISIRDDRPLFPSPQHFDRRLGINRPNKWLKDIIEANHLTPRITLHGLRKSFVTNMIRSGVDVSTVQRLAGHSTPDVTLRIYAGMNQSDAREGIDKLAEYMEQVTF
complement(1101815..1102516)       PHAGE_Brevib_Jimmer2_NC_041976: hypothetical protein; LPL9_1091; phage(gi100017)     2.20e-06            LactobacillusparacaseiMITIRLKEVSKEKGYTLTDISKATKLSMNTLSVLGRGESSGIQFDTLEKICSFLDVTPNDLIELSPDKYVVVMPVQRRINHQAIAYVYNEKDYKKMASNEGPMLKIDNNNEHLIVVTQMNESKDMVQFFMGFPMQRTDETKKRPLLTEEELSSTRDWLNRLDNSQKKSICEQAAYLYLKQFSKGNYPNSIFTAVISDDNSSSIIYPFWVGSKTGKLVDLQFRDGGPIRPDDLD
1114353..1114365                   attR                                                                                 N/A                 TGGAGGTGAGGAG

#### region 5 ####
1202239..1202250                   attL                                                                                 N/A                 CGTGGTGAAGTT
complement(1202300..1203484)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LPL9_1199; phage(gi100026)        0.0                 LactobacillusparacaseiMASISSYKLKDGKKAWEFYIFAGVDPQTGKEIKIHRRGFPTEKIAQQEATLAEAEIIKGHSHYQTERILMADYLNQWITKLKVNVKEGSMIIYRYNLKKYIIPKIGDIRLAKYTLKEHQEFISSLFNDGLSLNTVKLINGTLHNALKKAVAIGYITKNPTVGVEFSAYAKDNSKKLHFWTKDQVGSFIEAAEEDKEPMWLSFFVTLIDCGLRVGEAMALRWSDIDFSKNTLSVNATRIYRAETGSNAGKIALDRPKTLSSKRTEYMTARVNDLLQQQYERHFSHGNVQGFRFSTSHNNDFVFTYSSDAKFGQPLRSRATTGAFNRITNRAGLPHIRIHDLRHTHAVLMREAGLSLDDIKDDLGHKDISTTQIYAEISPAKKKENHQQFEKYLNQ
complement(1203574..1203777)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LPL9_1200; phage(gi100029)        7.87e-40            LactobacillusparacaseiMNGPVTLSEAHFIGLIIVLIGVYFALFGHRHHWVRWLIDPDKPGSNLWWAAVFIIIGVLMMMVRKMQ
complement(1203801..1204025)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LPL9_1201; phage(gi100030)        3.70e-42            LactobacillusparacaseiMAVYCFNELHHSSLLLRAKTAVLTAEEVLPNFAENLNTFQKSLQYDRPVIIRCTPLTVKIRYNNDIEFSKLNEI
complement(1204431..1205114)       hypothetical protein; LPL9_1202                                                      N/A                 LactobacillusparacaseiMSAKEDSLNFKEYGELALEGIIASIPSVGAALQTAYFGRKNEKRFKRIESFYNELSKDINKLHAQMATSEQIDSVSNELSDFMEATNDIIESQSSLAKRSMLHNAFLNILTSPESVDWSKSRFFMSTVSQIDMIDLKIMFAIQKIPSNRWAIPEEVERALSLDHFFSIGLLERLTNLGYLEKRLGSITMNENGTNIDTYYRITNLGNQFLDFVMNPPVSTNTQNSDN
complement(1205191..1205892)       PHAGE_Lactob_iLp84_NC_028783: hypothetical protein; LPL9_1203; phage(gi971743092)     4.71e-32            LactobacillusparacaseiMAKKVMGADGKQYKVKKPFYKRVWFWVLVIIVVAAIGGGLNNKGKSSSESTEKTAVSKTDKSSSSTSKKDSGKITRADFDSITLGDLMQNGNGGAKLDDLKAKFGNPSSTSSSTTNGVKTDLVTWTNVEGGLGANVIVSFTDGNAFSKNLTGFKLSRKQKITLADFNAFQDGTKYTDFTSKWGQPDYYNESLIGGQKNVVAGYTSGVKGDLGSNFNVTFTNDALSGKTQSNMK
complement(1205956..1206375)       PHAGE_Lactob_PLE3_NC_031125: RecA-like recombination protein; LPL9_1204; phage(gi100035)     6.05e-93            LactobacillusparacaseiMMTEFTSEMLREVLNYGFDRGVGAELTYKLKPYTPSVSNPETRWIAVNMNWHEPKQLPYQAAHEIMHVLHQDPACLYFYSASKNSIEGEANIGGIHILVPLYFAGIDKEDANLNQFMKAFDIPASMEDAASEAIKGFYI
1206838..1207080                   PHAGE_Brevib_Jimmer2_NC_041976: hypothetical protein; LPL9_1205; phage(gi100059)     1.58e-06            LactobacillusparacaseiMNEKLKERRKEFHLTMQDISNMIGISKGYYSLIERGERRVSYELAFKIATALKTKPDLIFLEYQSTLSKHSPAQRKEVVK
1207077..1207388                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LPL9_1206; phage(gi100038)        2.56e-72            LactobacillusparacaseiMNEELKQHALRIAEILQEQGNPYQRIEIDADGIKKISTDWSEPAETSKNPSKLIIKGHPYAMINVTRNNELIASISASDCITAKGFFVHFVDNEKDARFTSDD
1207442..1207558                   hypothetical protein; LPL9_1207                                                      N/A                 LactobacillusparacaseiMQVSNGVVFILAILYGLYKLRTIHVLSGEVVMKLLITP
1207682..1207828                   PHAGE_Lactob_PLE3_NC_031125: clamp-loader subunit; LPL9_1208; phage(gi100040)        2.22e-27            LactobacillusparacaseiMTREAMIDFLTRVYPEIPAFAFEQMPDEQLKGHVDEWLAEDADQLAMG
1208056..1208442                   PHAGE_Lactob_PLE3_NC_031125: clamp-loader subunit; LPL9_1209; phage(gi100041)        1.07e-89            LactobacillusparacaseiMNDSELSYEMANLFLGIPKLFSGDGIYHDLRGLLFTDKREEDEEKASFIKHDIEGLANDPNFTRDDAKNLKAYAFEKLDSTVADLTELNAICEMLGISIMDLFSERLPHYQKLHYMRKDEQAWNKNSH
1208421..1208642                   PHAGE_Lactob_PLE3_NC_031125: sliding clamp DNA polymerase; LPL9_1210; phage(gi100042)     2.39e-46            LactobacillusparacaseiMEQEFTLIDPTKPQRTRKPFKPKIYWTPKDVMAHYQVSAATVSRWKKRGAPFVGPGKTQRVEPEKMERWFARQ
1208655..1208783                   PHAGE_Lactob_PLE3_NC_031125: RNA polymerase binding protein; LPL9_1211; phage(gi100043)     3.15e-21            LactobacillusparacaseiMLEAIMSVLFDPSSAFWKYLLVTLVGIMIGATAVGGWKQWTR
1209015..1209185                   hypothetical protein; LPL9_1212                                                      N/A                 LactobacillusparacaseiMDIKKVRTDWKGDPIYSGDEIITNVGPEGDTIKDDPAEIRKYILHELSGVAIAADY
1209199..1210065                   PHAGE_Bacill_Pookie_NC_027394: replication and recombination DNA helicase; LPL9_1213; phage(gi100033)     1.42e-48            LactobacillusparacaseiMANEIVASVNNRITQMQKNEGLKLPANYSPSNALNSAWLTLSDNSKGPSLLDKTSPQSQAKALLNMVIQGLSPAKNQVYFIPYGKDLTLMRSYFGSLAILKRLDNVKDVWAEVVREGDNFQIGSDRGRTVVKVFEPRIENQDNPIAGAFAVIVDNNGTENFTIMTKKQIDQSWSHAKTKKVQQEFPEEMAKRTVLNRAAKFFINSSSDNDLLLGAVNDTTADEYDNSEPIDVTPNFDDLIDSKPKEDKKHVADADQAEPRESEQAERSEHQPVTDKEVANLFQGQANK
1210085..1210849                   PHAGE_Lactob_PLE3_NC_031125: late promoter transcription; LPL9_1214; phage(gi100046)     8.70e-90            LactobacillusparacaseiMDWQYESPTWFKKFMACEAEALAEMKGEWKPKRDPTALLVGNYLHSYFQSRYAHRKFKAQHPEIISTRGATKGQLKKEYQMADAMIKTLRTDPMFKEFYQGKKEVIVRGEIGGVMWKGKLDCLPTNHKYFADLKTTMDINKRFYLPDERRYGSFIEAYNYSLQMAVYQELVRQQYGVQAVPVIIAVSKQDPPDKAAVSIPQDLLDYWLERVKELQPRIEAVKNGQEKPHRCEHCEYCRATKHLQQIISLYDLIE
1210861..1211778                   PHAGE_Lactob_iLp84_NC_028783: DnaD domain-containing protein; LPL9_1215; phage(gi971743106)     9.56e-117           LactobacillusparacaseiMARPVKEGLDYFPFDVDFATNEKTEAITGEFGPKGVLIFIYLLAAIYRKGYYLEWTELAKNQLVNRVSGATGELVGLVVKRLIEYGTFNKDLFLSDNVLTSQRIQETFTDATKRRKSQKPTLYWINADSNSDSYGVNDDINTQSKVKESKVNKNKTDSQAGVRVHENARLLWQNVWGFPNAIATQDLEEWIGNFGDDLVCWVIKYAARKDVKAKGADRYLAKVFDGYTERKIKTVEQAEAESKKHEETARANYTGPQRYGKPERVDKEPDWLKPGYQEPKHEVTPEQRAKLAEQLEQLNQLGEKN
1211790..1212275                   PHAGE_Lactob_PL_1_NC_022757: single-stranded DNA binding protein; LPL9_1216; phage(gi557308026)     3.86e-101           LactobacillusparacaseiMLNSVSLTGRLTRDVDLRYTQSGTAVGSFTLAVDRKFKSKNGERETDFVNCQIWRKSAENFANFTKKGSLVGVEGHIQTRTYDNAQGQKVFVTEVIVDNFALLESRQTSQNSPKSQQTANASATTTTNASQTTPNASRANTTDPFANNGQPIDIQDDDLPF
complement(1212346..1212474)       PHAGE_Lactob_iLp84_NC_028783: hypothetical protein; LPL9_1217; phage(gi971743109)     1.42e-13            LactobacillusparacaseiMANKTTSRRAASAASAVLRDRRTSKTSKTAAASALAQRSKKK
1212590..1212805                   PHAGE_Lactob_PLE3_NC_031125: RNA polymerase sigma factor; LPL9_1218; phage(gi100049)     4.28e-45            LactobacillusparacaseiMWYIIEKIMNKKGYSIRKLSRVAGYKNPTTIYSIKTGQSKDPSFSTMIRIADALGVSLDELRPDKQGEKKA
1212802..1213251                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LPL9_1219; phage(gi100050)        3.39e-86            LactobacillusparacaseiMTQVTVRFYKQGDKVWRDFKAELHKRYEKAVMLDISESEAFSKIEKQEFNNRIVVSKKAIVEKRAVTGIDNRDMPSVALISSIKAVNKRGKANRKKYAVKVAEAASKSKTLTEVAKRVGKSRPFIQAVAKEFQIKLPSRNNGREEIVSR
1213298..1213552                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LPL9_1220; phage(gi100051)        4.68e-51            LactobacillusparacaseiMQAIKTKMMVGDLVMVPDRVFMGVRDLGGVARIIRIERYNARGASLAINKPVAFDGKAPKELITTVEMVDGKQRQYYLKDVKPA
1213618..1213914                   PHAGE_Lactob_PLE3_NC_031125: recombination endonuclease subunit; LPL9_1221; phage(gi100052)     6.21e-68            LactobacillusparacaseiMFGGAKVKKQATETVMLAVRKAMNQGVKFQWGKPLSFDWYWYDKRTDPDNIAFQHKFIFDGMQKAEFLENDNWDHIVELRDRFFIDKANPRVEVEEID
1213871..1214038                   hypothetical protein; LPL9_1222                                                      N/A                 LactobacillusparacaseiMTKLTRELKSKKSIEGGRLMENEVDDVYISQVTGEPVYVDTKGILYKLTKVEDEK
1214035..1214559                   PHAGE_Lactob_A2_NC_004112: hypothetical protein; LPL9_1223; phage(gi22296563)        4.57e-78            LactobacillusparacaseiMSEVKMCAVKNAEGKYWDFGETNGFLSFSNVDVPVTLDKDLATEVARNSGGHVVTFAEEPKKVVLSEKQAKIVEDANKYKFPASYISMKTDDYDGLEELLMNAYVNGYTVAKEKKYNVKVPHTKEAWYYKSGDTDLLTICPADKELRGKFTESEIEHYGLQDCEKEEVTDDDND
1214546..1214815                   hypothetical protein; LPL9_1224                                                      N/A                 LactobacillusparacaseiMTMIKLDSGQKVKLTDLTEIYIGHDGQLKLEYWIDVMSLKTATVTITERDMFRIKAAAIKSNTVDVDTPANMRKKFDHFIREKEKDDEQ
1215128..1215481                   PHAGE_Lactob_Lb338_1_NC_012530: hypothetical protein; LPL9_1225; phage(gi226377667)     6.14e-26            LactobacillusparacaseiMSNETKRDVFEAVWNRLAGYQVFFNGWPRETLYDYKKRYDTALPDDLPTIPLAVSEEIKGSHDSLSLRDELESVDSTSDDFSVVDYIENSESVFAEAWSRGMWRVEETGEVTGYDRK
1215468..1215866                   PHAGE_Lactob_Lb338_1_NC_012530: hypothetical protein; LPL9_1226; phage(gi226377665)     3.81e-37            LactobacillusparacaseiMTGNETKRDVLEKLAECYAEVYDAYTDETGSPYYCDDEPNYLDEYDAALPDDLPVIPEAVGEYIRKAKAPGKWGLLDVFWHLEDNISAVGINGLYDWQRWMADNQVAVVRAWLLESWIVEENGEIVKLEAER
1216466..1216615                   PHAGE_Lactob_iLp84_NC_028783: hypothetical protein; LPL9_1227; phage(gi971743115)     4.43e-29            LactobacillusparacaseiMNDRHRAVMRARIRYERRKHERTMDEFAKSLYPVFNAAAATIEQWLAAF
complement(1217578..1218498)       PHAGE_Staphy_phiPV83_NC_002486: transposase; LPL9_1228; phage(gi9635740)             2.16e-47            LactobacillusparacaseiMAIITLIERSQIELMQHHTIQYIAATLGRSCISIRHELHRCPEGDYCAIIAQDHADTCRHRCGRHSILTPKLKRMVTEKLNLGWSPEMVGYAVHCAPHTIYHWIYQRQVDFQPSQLFDHGKRHKRRQDLRSRYNQAVGTSIEIRSESANRRTEKGHLEMDTVRGGRGSKAAVLTIVDRVTRLMATTKLENLSQNAVLKGFARLMVDFPGPVRSVTVDHGKEFSCDQALTKRYRIPVYFCHAYHPNERGTNERFNRELRYYFPKGTQFDQVSETDIQQATALINNKPRKCLRWQTPVQAVSKPLSRW
1218725..1219741                   PHAGE_Staphy_phiPV83_NC_002486: transposase; LPL9_1229; phage(gi9635740)             1.25e-43            LactobacillusparacaseiMTHSQTNTHKHYQQLSFSDRATIQALQAAGDTATVIAQKLHRSKATISREITRGSVTQLDSKRHSHQVYLAETAQAMHDRKRDRTGHYAFLKTGRAFFKALARELTRKPRVHSVDSFVHFYRDQGKACPSTTTVYRYIDAGLLELDNMTLPKKLRRRIKGYKNAHKRKNKKIYGDSIELRPAAVNDRTGVGHWEGDLVKGIRLADEPALMTLTERYSRTEIIVKIPDYHAGTCLKALQDTIDDYGAKEFESITFDNGSEFAKLSEIVGTQIYFAHPYSPWERGTNENANGLLREFFPKGKSLRAITLVEIQAVQSALNHRPRRILNYLRPCDYYRCMA
1220814..1222031                   PHAGE_Lactob_Lc_Nu_NC_007501: hypothetical protein; LPL9_1230; phage(gi78000019)     0.0                 LactobacillusparacaseiMQWTDEQISGIRKLASEGFTRRETADKLGISYDALQGKARRLGIEFQKPLKNEYDSGGTNRETPSADRKVALNADGSQTVTALMRLKHEPNKDPRTLMELCGYDPDKFEMVLGDYKVYEQHSTEDGTVPQYSIHIRVKPKQGLSISEMAEAFNDKIIPVNYGMKKSGDRNLVIPLPDLHFGWTTFADLKDMVSQLREIIMDGYNEIVIEQLGDLFHSDQIHATQTVRGTQLDHANMRQAFHDAVKLFDQIIPLAIEYSNRVSIKSVFGNHSGDLEYAFLYALIDRYPQVHVDLNDSNQATDWRCAYLLGHVGIMLAHGDVAKDKLTGLFPFEYKRIFSVAKTYELHSGHYHSERFKDDRGIMWRQLGTAKPNDPYEIKNGFTTGKHLLYAFVYDDTRLRCTYELN
1222186..1222347                   PHAGE_Lactob_PLE3_NC_031125: dihydrofolate reductase; LPL9_1231; phage(gi100060)     8.65e-32            LactobacillusparacaseiMPVQTITADADDYERFRKLGYRSMPVVKIYKADGTHDEWCDLQVDKIKQYTED
1222384..1222956                   PHAGE_Lactob_PLE3_NC_031125: protector from prophage-induced early lysis; LPL9_1232; phage(gi100001)     5.11e-128           LactobacillusparacaseiMRLTAKQKKFVDSYIADSNATKAALEAGYSKRTARFVGAENLTKPNIKAAIDERMKRIESDKIAKAAEVLQYFTTVLRGEAKETIIVSTPDGADAVENDPSIKDRMAAGRELLKRYPGNDELLNAQLTKIITDIEKTKADVRKSKAEADIMEAKASAYRTPEGQYGGLNKLLAAIDESIPKDGDVNDNPD
1222940..1224193                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LPL9_1233; phage(gi100002)        0.0                 LactobacillusparacaseiMTTPIDQFKGKQLDIINWWRRYPDKQTIIADGAVRSGKTFAMSISYVLWSMIMFDHEQFGIAGKTIGSLRRNVIRPLKQTLQQVGFSVVDRRSENMLEISLDGRTNLYYLFGGKDESSQDLIQGITLAGMFFDEAALMPQSFVNQATARVSVTGGKYWFNMNPEGPYHWFKTDWIDQADDKRALRLHFVMTDNPSLSDEVIDRYEHMYSGVFYQRYILGQWVLADGIVYDNFNKDEMVSNPSQQPSRYYVSVDYGTQNPTVFLLWGKCGAVWYCLKEYYYDGRHSSRQKTDDEYARDFSQFVGDIRCEVIVDPSAASFITKLRERRYRVIKADNDVLNGIRETQTAMNSGEIKFTPGLTNLFKEFASYVWDDKASQKGEDKVVKAHDHAMDAMRYFVMQVIKRRNAAHTFKNTSKYF
1224198..1225625                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LPL9_1234; phage(gi100003)        0.0                 LactobacillusparacaseiMAIILTVQGKGSITDGDVFIFPTDEELTGDDINAFITANDDLAKNKYLPAKKMYLGQHQIIDDAKKDHGPDNRLVGNLAHYIVDTYNGFYIGIPPKITLDNTQDNTVLQEWNDTNSVQDKLSEISKQASIYGRALAFLYQDEDSKTCIAYSSPINSFLIYDDTVAHKAVAFVMYWHDDNNNLTGKVYMKDGIYGLDMVRFEGTDGFNPFNEVPAVEFFMNTERQGIFENVDTLIDALDKVLSQKANQNEYFDNAYLVLKGLKLDEDDDGNPKLDLNGNQIIYAPDADSAQGVAEFLTKPDGDAIQEHLIDRLISMIYQISMVANLNDEAFSGNSSGVALQYKLLPMRNLAANQDRKFTQSLRELYKIAFSVGTILPESKSDDWQKLNFAFTRNLPENITDEADAASKLKGLVSDQTMLSTLSFVDDPKAEMKRIADETAQKAKDAAANSPSSPDFQKLLNGGGNDDNNDSTTDSE
1225591..1226577                   PHAGE_Lactob_PLE3_NC_031125: DNA topoisomerase medium subunit; LPL9_1235; phage(gi100004)     0.0                 LactobacillusparacaseiMTTTTQQQIASNSAYWSKRTAAERKWIVENLKNDEAFNARIKEYFDKALTNVQKDIDSELTKYAAYSNDSMAGARQAVMATDIKAYQAEAKSIVDDARKMYNGEPLKYSDFSKDVNDRLKLYNATMRINRLEMLKSEIGQEMLDAHMKVNADLISKLSDDYQFEIKRQAGILGETVSRGGYTDLAKLLSKREGDYTFSQRIWINQDILKAELDELLTSATIQGQSPLKIARKLRGQVAETVNNHRYVTERIARTESARIQTQAQLDSFNKFGYDYCKWVAEPSACDACKEISEGGRTGRGIYRVDDVPDIPVHPNCRCSIAAYAPDDD
1226587..1226913                   PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; LPL9_1236; phage(gi100030)     1.87e-06            LactobacillusparacaseiMKLPEKVLIDDIEYKVEEVSHKELQLSSEDLKGEYWGDTRYKQASIRICEGMAEDEAKITLVHEIIHAILQERGFDQQNNDEAMVDGLAHAIRMLAKQNSELIKEVLS
1226910..1227344                   hypothetical protein; LPL9_1237                                                      N/A                 LactobacillusparacaseiMKSEGLKTRESIKKRLLDLAAEANSIKDYQLGALILNAYNRCDDNVTIQNGNLYVNGELMIIDNATLANHLAMSSTGYNKAPSGNASHISTLELRDDGPYLNGKRIKGLIDMNIDSKVGDLTKVVIKLAANVHGIDDIDKGYSI
1227486..1228127                   PHAGE_Lactob_PLE3_NC_031125: DNA topoisomerase II large subunit; LPL9_1238; phage(gi100005)     4.79e-118           LactobacillusparacaseiMIPKILMPMNLQFFAEDKPQGDPKNPVDPPKPKDGDPVDPLEDKKQGEPADPDPDGKHVYTDEQVNEIVKKRLARAEREKQAAVDEAAKLAKMNADQKKDYELEKAQKERDELKSQLATYEMGKQARSMFEEAKLTVTEDDLQHVVTPEAESTEANVKWLIAHDQAVAEGVRQELLKGSTPKTHGSKVETPGAAFAKQRNQQSQVVNDPWKQK
1228140..1228454                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LPL9_1239; phage(gi100006)        3.13e-69            LactobacillusparacaseiMYAGKKVTASEINFLDSEKFVSFTHQADSSTAGVVDGVLPAGSIYPKNDATAVGVTINDVDVSEGPQPVGVIVEGYVNAARLPVKPSAAAITALKEIKFSHVSD
1228468..1229508                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LPL9_1240; phage(gi100007)        0.0                 LactobacillusparacaseiMPAILDLFNQKTVLDYVQNRQYPQLLGDTLFPSTKINQLDFEFLRGGSKTPIVASISAFDTEAEIGSREASVQAAELGYIKRKMQINEKDLIALRNPRTPAEQSYLTSLVYNDLDVLVQGVYARVEKMRMEALATGKITINENNLNFNVDYHVPEEHQVAATTSWDADGADPIKDLQDWFALLDYVPTRILTSSKVQTALIRSKAFADYFKTAGLLPSVGSLNAVMQSFGLPTIVTYDAKYRKQGANGIYTVERYFPEDTLVAFGDDQLGQTVYGPTPEESRLIATPGVQQDIVGNVFATVYETTQDPIATWEKAAATALPSFPEAENVLQAKVLVPTTTTTTTSK
1230079..1230867                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LPL9_1241; phage(gi100009)        0.0                 LactobacillusparacaseiMRDVVLLFTRHDDFIPQRLTDKYGVEVHTYNDLRSDQSYIPSVKPWLWWQYLAEDKSRENEEYFYFDSDVIFRKRPDFRKLKARPDRWLCSDTNGYLNLNYIKRCKNGEQILTRMADIVGVTLASLETINHNSGGAQWIIGHPTAEYWHKVYADSNRLWHYFQIVDSDIQKWTAEMWAQLWNMMYFNIGPVISDELDFCWATDPVKRWKETKIMHNAGVTGDMHDLFFKGKYTDRVPFGDDLSFVDKLKCSYKYVQAIKAVK
1230867..1231241                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LPL9_1242; phage(gi100010)        8.90e-87            LactobacillusparacaseiMAESDPIKLADLKTMMEIKTDAQDGVLNLIIKNTTQALRFKLGLRTDEAFPSELAYIALEVCVRRYNRRKNEGMTSYEQEGQSFTFKSNDFDDFADDINDWKEANGKNAKSLGTVSFISGYPKR
1231246..1231548                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LPL9_1243; phage(gi100011)        2.92e-63            LactobacillusparacaseiMRLDHEVTFWLDDEEYDPQTHQYGDVKKVATAVASVTDMGTDKSVQLFGNYAQKAKMIRLVEPVTVNWSYLTIDDEATHYALNTDRVPLQNATLIVGETK
1231545..1231910                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LPL9_1244; phage(gi100012)        3.46e-76            LactobacillusparacaseiMSKAGISYNMQIKGMDKLVAGLLKRAKMDVVKQIVKQQTAQLQTRAQQMTGTVYAHPTGATKRGIKLAITDSGLSGIVAMTQEYNPYTENGTRFMRARPVLKPAFLYQKIQFINQLKQAAK
1231911..1232315                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LPL9_1245; phage(gi100013)        7.29e-95            LactobacillusparacaseiMIQITSPEQELYDYFYAFSQSSGYKTYDHLPMQQENAPYPFVIVGDIQVVPTATKTSLNGNVLITIDIWGDKKQRFTVSDMAERFFRAAIGQVLTDDYRFYGRVEDHSKEFTQDQSVPDTVLNRATLILNLNIL
1232327..1232929                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LPL9_1246; phage(gi100014)        7.12e-123           LactobacillusparacaseiMANELKVLEGMDVVALARKHSDQATVSGQIIPWQTSLSFDPSVDSDSTVTKDGNVATRSSASTDLEVEFLNNTSAIADVMYDSLFDGELLDFWILYRKRKNAEGKYLAWYMQVTVQEDSNDNDPDDHSTRDVTFSVNGTPKRGWTTLDDETQEQVDYVFLGVGKVTETDATGGGTVWDKAVDPGTNTAGTEPAGGTGTGA
1233016..1233348                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LPL9_1247; phage(gi100015)        1.91e-56            LactobacillusparacaseiMQLTINGKEYELNFGVRFVREMDKNMGAVMHGINFGMGVAKALAGLNAYDAAVLSDTIYSATVASKKRPSASEVDDFIDSNSDLDSLFKQVSDEMNSANAVKAVAKNMKA
1233480..1233806                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LPL9_1248; phage(gi100016)        1.60e-68            LactobacillusparacaseiMEAYQLKQVDRQNEIAQQAWMNQQVQATTGSKNPKPKFKTFDDFFDKKAAIDSVRSNYEPNYEVSQMSKTELKQKRAQVFAKRMAEFQRLKREGKIIPLSERKEGAHG
1233799..1236888                   PHAGE_Weisse_WCP30_NC_031101: hypothetical protein; LPL9_1249; phage(gi100030)       3.46e-99            LactobacillusparacaseiMADSFSVEAILSAVDRNFSGTFKNVASSASKIGDSFEKSTKPAGNFVSTVSKIAGAIGLVKVVGAIGDGVRSMVGELDESSKAWQTFESNMKFLGKTPAQISSIEKSLQSYAQETIYSSSDMASAYAQFASVGVKGVGRLVKGMGGLAAATDNPKQAMKTLMEQGTQMAAKPMVQWADFRLMLEQTPAGMAAVAKAMGMSTKELVQNVQNGKISTQQFFDGIEKAGNSKAFQKMATSYKTVGEAMDGLQETLANKLQPAWQAISKVAVGAISGIIDKIGAINFDSVISSIGKFFSPFSALVLNIKTQLGSLGKGDSMSGIMSIFQEFGSYLKTVWSLVGSIANVAFVNLVNVVNNVGSAFEKVFSGNDISKYFDTAKEIITDFGIAAMEALTAVGDFISNLPWEGIFNGIKGALSGVVAVLKPIAAVVKAAFANDIVKSFAAAILGAVGAFKVIGLAIGGFSSVLGVFSKMIGPIRGVVSVITNFGTIVKTAGGVWKAFGLILGMNPWVLLIAGIAAVVAGLVYFFTQTKTGQKLWSGFVSWLQGAWQGLVRVAQTVWNAISGAFTSAISGIQTAWSGITGFFRNLWTGITTTASATWTAFTTTLSVIWQGAVTAATAVWNALSTFFTTLWNGIVAVATAVWSTFGGSLTTIWNGIVQVATGVWNMLKAVIMGPILIVIDLLTGNWTQLSADLQLIWNSIVSAAGQIWNGLVTYFSGIWSLIQTYAMTVWNTLVSTLEGLWNGAVSAASAIWSALSSFFSGLWSGIVSTTEGVWNSVVSFLSGLWSGTVSTAEGIWNALPGFFSGLWNSITSFFSSAWNNIKSIVIGAATSIFNGAKAVWSGFTGMVSGIVNGIKGAFNALRNFSLADAGRAIMDSFFNGLKAVWGKITDFVGGIASWIRKHKGPISYDAKLLIPAGNAIMNGLNAGLTDKFSNVQKNVSSMAQAIADSAAVTMPEVNTSPFDTSLQSLNNSVQGATLSSNLDVNYTRKQTIEVPLYIDGREVARATANPMQTELSRMTRMSNRRKGLF
1236891..1238954                   PHAGE_Lactob_PLE3_NC_031125: exonuclease A; LPL9_1250; phage(gi100018)               0.0                 LactobacillusparacaseiMYDFRETTPFTGSDDNQRPAEAMLIDGHYIEDLIPGYSTLQVSGRELLSQSIEKQTIGKSDGEFIQYVRNPSREIVVGYRLAAADNLSFRQAFYKLNDILHGENHQVSFNDDPSKYWIATFSDIDDVPKGRNAITSSFTLFVPDGIAHSVATQTADNMPYKNYPANQLHNTGFGWKNSNDWNPSIWTPDGTITNQYGIITSANTSKSVIQHTVSQSESSWITSEMTVTISVYVQGQGSISSGYFNGSDWEEDSQAQQVDSDDYVQLSFIRVINAVHLDDGSPIFSINAFCPSSTIQIKLLKVELGSTVSPWSPNPADPEYYSDTITVHNGGTYPVEPVITTTMHADNGLIALINSQGGVLQFGNPEEADGVERQRSEVARYEGFDKEPAGAAYNTGQTNSHYYYIAAQKNVMEGSVKYADDDGSAVEPVFLPTNSYYWEGPSLHLKTTNASNGSNTGSFIAKWRYKFNSNVSALGAIEMTLDNDTGVAYQVIIRSNYAGKDDVDVQVFAGSTLVFQQTLNRSVFSNGRYYEAKLTKLGNTLNLQLAGIVQGGIKPSEVVTRNPPLIMPPIMLTSDQASLPITGATLWFQRFENYPYPDMGVYDMDIEWLNVDYWADLSNRFSAGDVATIDVANRQILVNGVINADLQLIDNDWKKFRLLPGDTQILAQRSSWAQPYELEVAFREAFL
1238954..1240885                   PHAGE_Lactob_A2_NC_004112: putative host interaction protein; LPL9_1251; phage(gi22296536)     1.37e-137           LactobacillusparacaseiMADFYFTDRKYNQLGIASTDELASSSVIAIDDIGGQEGDYQSVDGGYRSYSATLHFSPDQSAQVKEMAKVGNFVLFKGRAGESVWTTILSSEHDPLAGTNTFVAEDASIDLINGTVGAYAASSAMTIAQYIELFAGNSGFVVGYNEIPDLTRTLKWDSDDSSILTRILSVATQFGVELSFRFEVRGLSVIGKYIDIRKHIGGNKGIYLRVDTDLNKIVTTSDIADLCTAIAGTGGTPEGSNDPITLKGYRWTDPNGRYVLGGDGVLRDPVALRTWSRLLSNTNTNPVDAHITRNKTYEATTQATLLQSVLSDLEKFNHPAVNYEVDIAKLPDTVNIGDTVYLVDEDEQLFLSARVLELTYSYSNESGTATLGDYLIQASQVSAEYRALAETLAKQNKGQDGKDGIGIQSSIVTYQAGSSGVSAPTGTWSDAVPNVAANQYLWSRTIITMTDGSTSTTYSVGKMGANGADGIGLKSSAVTYQIGTNGTTAPSGTWSSTIPPASQGTYLWSRTVTLYTDGTQNTSYSVAYQGTNGAKGDTGPQGPPGSQNVPMTYVQTAAPTGTIVTNSLWWVGATMSSVTALKRWNGSSWIPESIAQAVLNIIELNAVTINSAIINSPKINVPFSHAIINESGILSSGNLTLNA
1240991..1241911                   PHAGE_Staphy_phiPV83_NC_002486: transposase; LPL9_1252; phage(gi9635740)             3.58e-47            LactobacillusparacaseiMAIITLIERSQIELMQHHTIQYIAATLGRSRISIRHELHRCPEGDYCAIIAQDHADTCRHRCGRHSILTPKLKRMVTEKLNLGWSPEMVGYAVHCAPHTIYHWIYQRQVDFQPSQLFDHGKRHKRRQDLRSRYNQAVGTSIEIRSESANRRTEKGHLEMDTVRGGRGSKAAVLTIVDRVTRLMATTKLENLSQNAVLKGFARLMVDFPGPVRSVTVDHGKEFSCDQALTKRYRIPVYFCHAYHPNERGTNERFNRELRYYFPKGTQFDQVSETDIQQATALINNKPRKCLRWQTPVQAVSKPLSRW
1242085..1242531                   PHAGE_Lactob_Lrm1_NC_011104: host specificity protein; LPL9_1253; phage(gi195661215)     1.75e-12            LactobacillusparacaseiMGVLELSDLISGLGNNATYNTSSLDAEKIYQLNNVSNTLWQGVSLLGWSGNAQSITPSKKITDCLNGWKLVWGEYSNGTFSGTGIRETEISKTSVLKYPGAGRILSIMNYGNANCSKYVYAYADHIDGNTKNSDGAAGGVVLVGVYEY
1242543..1242818                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LPL9_1254; phage(gi100020)        4.17e-13            LactobacillusparacaseiMKVRLDTQADGFIYAWGTDYTSDNVVDIDENELKKIVAGASKLVDGKIVVDQQRVTDLYPTDAMPTPSPEQQMIAALTLEVAQLKAAKSSD
1242811..1242942                   PHAGE_Lactob_iLp1308_NC_028911: hypothetical protein; LPL9_1255; phage(gi971754935)     8.33e-24            LactobacillusparacaseiMTNYDQCALLYSWGIDLAPYVPVMITPDQYKQITGSNYVASKS
1243543..1243989                   PHAGE_Lactob_PLE2_NC_031036: hypothetical protein; LPL9_1256; phage(gi100022)        1.26e-79            LactobacillusparacaseiMNNLTELLVSLAVAAIPIIGAWISKQLLANKQALALVKVLGPLANAAVTAAEQLGVTQAIDGAVKKSTAIQAVKDGLKSLGFTSTDEQTIANAVEKAYADLKDSLAETYPQKTVDQEASNQDKVAAAAQAAADAVKAQLAPSSVAPQQ
1244000..1245166                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LPL9_1257; phage(gi100023)        0.0                 LactobacillusparacaseiMKLKTKLITLVVAFLAAISFALPSQVNAAKGDIGVDWAVYQGASGKYGTNNKFAIIQAGGTQGGTLYDQWTYASQVKAAQANGLKAHTYLWYGVGGSADIGRQALDYFLPKILTPKGSIVALDYEDGASSSMAANTDAILYGMRRIAQAGYTPMYYSYKPYTLAHVDYQRILAEFPNSLWIAAYPDYQIRALPDYGVFPSMPGIALYQFTSMHAAGGLDGNVDLLGVTDNGYSQQPVAPSQPATPSQPSTSTAASDTDYAQTGVFKPSTTVNIRTGAGTGYTAVGSYVPGEILVYDHVYIRGTYVWARYLSYSGRYHYVALGVNGGESYGSRSSGYTSPVSHTYYTVRSGDSFWSIASKYGISMYTLAANNGKSIYSVIHPGESLYIR
1245241..1245252                   attR                                                                                 N/A                 CGTGGTGAAGTT
1245326..1245439                   Glucose-6-phosphate isomerase; LPL9_1258                                             N/A                 LactobacillusparacaseiMKPYEISAQANHNKKNMFALLGRPGYEDMTKELNARL
complement(1245798..1246151)       hypothetical protein; LPL9_1259                                                      N/A                 LactobacillusparacaseiMHLHKIFYALDISVNTNVKDTGQSGNNINFEILIGRTKTTSAKALKLVNNPTGNAYKEPIFSITYVRSFNDEIKFYLFANDLERNISPSFQSAAEGYNITLLPWSQKASWIGQLRLA
1246239..1247414                   PROPHAGE_Escher_CFT073: transposase; LPL9_1260; phage(gi26246249)                    6.57e-64            LactobacillusparacaseiMNELTTEIIAALAQKQDLDEVFRHHLEIAINQLLQTELAEFLGYERYSYAGINTGNNRNGSYERSFDTKYGQLNLTIPRDRNGRFENHTLPAYGRHSDNLETTVIQLYTKGITTAEIAELIEKMYGAHYSKATVSNMTKAVNEQVQAFQQRRLASQYAAIFLDATYLPLKRDTVQKEAVHIAIGIRPDGTKEVLNYQVAPTESTGIWTELLGTLIKQGVKDVLLFVADGLVGLDEGLNRHFPKAKRQRCLVHVGRNLMNKVRVKDRKAVISDFKQVHRAANREAAELKLNEFANNWHQTYPKLIKDLLKMPNLLTFMDFPPAIRQSLYSTNLIENFNKHLKRTTHHKEQFPTEDSLDRFLVSQFNVYNEKSLKRIHRGFKGLQDTLEASFI
complement(1247446..1247937)       PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; LPL9_1261; phage(gi41179221)     3.30e-18            LactobacillusparacaseiMDMPTIEALKRARIKWLDVSFSYKDKNHFIEIRTPFPDMFHDNISLVSYKDADGNLMLSDDGYTMDELGTLGFDTNTSVKRKKYFNDTLLSFGVQYAPTGELTIKIPSLSKYAQAELQLIQCITQVGDMLATSRDRTKDLFLEDVVNFLINSDISGVSRILCK
