gi|00000000|ref|CP012334.1|  Bordetella sp. H567, complete genome. 5532470, gc%: 66.12%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
700767..700795                     attL                                                                                 N/A                 CCCCTCTGTCCGCCAAGAACATTCCTCAG
complement(707474..707677)         PHAGE_Salmon_g341c_NC_013059: Cro; AKI39_03115; phage(gi255252725)                   1.71e-08            MNPTRRIRQTLGLTQAELATALGISQSLVSQYERGRQEMPPDTARRLIQFAQTRGKRFTFNDIYLNQ
complement(708333..709361)         PHAGE_Burkho_phiE202_NC_009234: gp24, fels-2 prophage protein; AKI39_03125; phage(gi134288767)     2.03e-78            MRRAFDVPLWRVTLGDTDLTGVLKPRLISLGVTECRAEQADQLDIELDDTDGALAIPAREAVLRVYLGFQSTGMVDKGTYTVDEVEYSGAPDTITVRARSANLTSELRTRTERSFHKQKIRDIVAVIAKAHGLKSEVATFGDVVVPHIDQTNESDIAFLNRIGKRYDAVATVKEGRLLFIPIKGGQKVDGTDLPVHTIYRTDGDKFRYHVADRDAYTGVRAFWQDKRHKTRRSVVAGVIGNAKRLHETFASESDALDAARAEWERIKRGTATMTYDLAFGDPSLSAQHKVQFPDMKQPVGETVWLIKQLRHTLNEAQGLTTSIEAETNAVDVEPGDPDDTDS
complement(709358..709822)         PHAGE_Stenot_Smp131_NC_023588: phage tail protein; AKI39_03130; phage(gi589892019)     1.79e-34            MMMCIGMFVFGLPTIAYQTLQRHTDWRYAKNSRIGARQASQYIGPGDDVITLSGWVAPELTGSAASIDLVRRMAGTGKPYLLLTGAGVVMGAYKINSVDETQTLFYITGQARRIEFSIVLECVDNSQARSLLGDGLQIPVDLMNGSPADWSIFQ
complement(709832..712597)         PHAGE_Burkho_phiE202_NC_009234: gp26, bacteriophage membrane protein; AKI39_03135; phage(gi134288775)     0.0                 MDKTLQLRVITAIQDKLSGPLKKIIGASTGTAQALQDLRSRLKGLEDTQRQVGKFRDLSKGLSTTRGDLQATQDRIRGLAAEMKGAGTPTRAMQRDFDRAVVSAGKLKEQASQQAQQLQVMRDRLGAAGVSTSSLAQHEQDLRSRITATTAAMSKQVEQMDAVTARQKAMSAARDKLHAAQGTAANMAIAGYAARSAGMHGLHGLEGSLEQSKDFEREAVRIKALGLGDHATEDAAKYARAMKQYGTSTTDNIVLMRDALTIFADEHHAQMAMPTLAKMKFANEAMYGSGEAKANEEAFMNMLKVIELRGGAKDQASFDREANMVQKVLSATGGRVGGDQWRDFIQRGGVAAKQLRNDAFYYQMEPLIQEMGGHAVGTGLMSAYSNLYQGKTTVRAVSELMKYGLVNPKMVEYTKIGTVKRVAPGALTGGELFKASPLEWVEQVLLPKLAAKGVTDPGAINDAISSMITNRTGANLFTTLVMQAQQIHKNERLNKGAADIDQSVSLGKTLTQGREVEVLARWRDLQLELGEKISPLYNGVLRITAAATEKVTDFMQKHATTATVLVSALTVLAGLMVAGGTLTIGLAAVIGPLAIVRFGLTTLGVQGGLGARALSLLADGFRLAGSAIMFVGRTMLLNPIGLTITAIALAAALIYEYWTPLKAFFSDLWAKVASTFENAVQAVSGAAQRIWDGAVSVFGSMWASITGIFNGGVTGLGYALMNWNPLQLLYDVISGALATLGIQLPAKFTEFGAMLMTGLISGITGMAGAVKDSIVGMGDDVVGWFKDKLGIRSPSRVFIGLGEFVSQGAAIGIARQQPLAVDAARALAGAIAVSGALAAPAALAFEPTGSDGQPLSFDTRAPIAAAAGGRQIVIQGDTITIQLSPAGGADTEDLAQQIGRILDQRDRMKAARIRSQLSDVA
complement(712725..713081)         PROPHAGE_Salmon_Ty2: putative phage tail protein; AKI39_03140; phage(gi29143760)     1.75e-27            MTNPTPATAATASETAAAPATPTDPNAVELDEPIKRGSTEIKSVVLMRPNAGALRGTTLVALANMDVTALQTVIPRVTNPSISSAEVALMDPADLAAIGTKVAGFLLTKQDRAAFPGL
complement(713096..713617)         PHAGE_Pseudo_phiCTX_NC_003278: major tail tube protein; AKI39_03145; phage(gi17313242)     7.66e-62            MGMPRKLKQMNVFNEGTSYLGQCTSVTLPNLERKMEAYRAGGMNGSAKVDHGLDENSLQLKWKVGGYTKQILQQYGATSVSGVLLRFTQGFERDDIDGGGVDAVEVVVRGRHSVVDRGEAKVSEDTEWDITTECVYYKETMNGEVLVEIDILNMIEMYAGVDRMEALRKAIGI
complement(713676..714854)         PHAGE_Salmon_Fels_2_NC_010463: major tail sheath protein; AKI39_03150; phage(gi169936025)     4.52e-172           MATDYHHGVRVIELDGGTRPIRTIATAIVGLVVTAADADEATFPINRPVLVTNVKTAMGKAGSTGTLRRALEGIGLQTNPVCVVVRVEEGATEAETTANVIGGVSPTGQYQGVQALLAAKTSGPLVTPRILGAPGLDNADVTAALVSVAQALRGFVYAYAWDCATKEDVAAYRETFGQRELMLIWPEFTNFNTVTKATDPLSSVAVALGLRAKIDEEVGWHKTLSNVVVNGATGVTKDVYWDLQSTATDADYLNAKDVTVLINKEGFRFWGSRTCAGPDSLYPFENYTRTAQILADTVADAHMWAVDAPMHPTLIKDVIEGINRKFAELKAQGYIIDGSAWYDEEPNTVDVLKSGKAYIDYDYTPVPPLENLVFQQRITDRYLLDFAARVNA
complement(714981..715772)         PHAGE_Pseudo_B3_NC_006548: Dam modification methylase; AKI39_03155; phage(gi56692617)     6.77e-142           MATPIIPWIGGKRRLADRLLPYFPPHECYVEPFAGGAAMYFMRPVPADVEVINDVNQELVNLYRVVKHHLEELVRQFKWAFSSREIFRWHQITPTDTLTDIQRAARFFYLQQSAFGGKVQGQTYGVATTAAPGFSVLRIEEMLSAAWMRLANTYIENLPWQECVRRYDRAHTFFFMDPPYWQTEGYGVGFEWAQYEELAETLRTMKGKAMVTLNDHPDIRALFRDFTIESTDIKYTVGGGAGVDRSEVVIFSWDTKAQPASLF
716196..717191                     PHAGE_Pseudo_PAJU2_NC_011373: putative integrase; AKI39_03160; phage(gi209552450)     1.75e-34            MKARRLRESMPTLAQALDRYLNEVSSTKKGYVQERSIARAWLGTRLAQRPVDRIRNTDLIAIRDAWQAECAASTVVRRLALLSHVYTVIRKDWGFDALANPVQLVRRPAVDDARDRRFLDRIRLRGLSEADCPRQEVVWLMRATQSQELPTILTVAVETGMRRSEIVGVRRENLDLQHGVIHIPHSKNGRSRDVPLTPVAREALRQWVVGKPMRGRIFSMQPGSVTRAFIRARQRARRQYEALCKTNGRRPNPAYFNDLRFHDARHEGTSRLATVFEIHELAKVNGNVDTRMLLRYYHPLGRELAQKLARSALGRRQIAEIRESRLLLEAA
complement(717188..717532)         PHAGE_Pseudo_phi3_NC_030940: hypothetical protein; AKI39_03165; phage(gi100032)      6.28e-11            MKTKTVFQTNLDGLFLYETIANELALQAGSFNVPYGAVESPPPQVAEGQVARWTGAAWESVEDHRAAALYVVDTSEQYTHGSVIEIGGDQVAYAGWGPIPDWLTATAPVAQVGD
718095..718367                     PHAGE_Achrom_JWX_NC_028768: hypothetical protein; AKI39_03170; phage(gi971741699)     4.31e-06            MPDVLFTANARAFGGRQLDAFQNIYGSIPATGTQIELATGVFQLMPQPQAFWTGTSAAGFDGFNFDASRVARTSSETRPVNVVFHPRIHA
complement(718598..719920)         PHAGE_Salmon_SEN5_NC_028701: tail fiber protein; AKI39_03175; phage(gi966201574)     1.75e-60            MTQQFFGLLTRIGENKQAAAQAINRLVQITHMAVGDGGGATPIPDRAQTALIDEKRRAPLNTLKQDENNPNYLIAEQVIPEDAGGWYIREIGLYDADGDLVAVANCPETYKPVLAEGSAREQIVRLVLMVASTAAFVLKIDPAVVLATRKYVDDKLHKNISVTGGATADAVALDGAGDIQIVVKALDVSKATAGTLPVPRGGTGLASVAAGSYLKGDGVNALVPRTPAEVFQDLQIAAAITQALASYPKAYSILALPAQDQGPILVIEAAEIWTWVSTAYFTGYKSPLCGRPVDGHTVSPLPSEVDAVGGLLSKTAYGALWGYAQQNGLLVSQAVWTANVGAHYFVDVDANNFRVPDLRNMFRRYTGTDADTANARALGSRQTAQLQSHAHNLRYSNTAAASGANQSVLDGGGALTYTTLVTGGTETRPVNAAYHPRIHA
complement(719917..720534)         PHAGE_Ralsto_RSA1_NC_009382: phage tail protein gpI; AKI39_03180; phage(gi145708096)     9.29e-69            MAKRDMLPANATPLERSTALAAAGIERVEIPLRALWDPYNCPEPFLVHLASAWSVDRWVESWPVDVKRRVIAESFNLHQRKGTRAAIRKAVEPLGFVVEFIEWYRMAPRGVPGTFRLSVGVLDTGITEDLYYELERLIDDAKPLSRHLIGLSITMQTEAQVNYAVAAYDGDTMTVYPYIPEELVATATAAPAIGQHIIDTVTVYP
complement(720527..721456)         PHAGE_Salmon_SP_004_NC_021774: baseplate assembly protein; AKI39_03185; phage(gi526003629)     3.41e-104           MAAASTPIDLSLLPVPDVVETLDYETILATRKADLLALCPVDMQPAIAAVLALESEPLTILLQENALRELTWRQRVNEACRAVLVATAVKADLDNLAARHNVTRLLVSPGDDTAYPPVPAIYETDDSLRQRVPEAFEGMSVAGPRGAYLYHARSADGAIADVSAVSPTPCQVVVSVLSREGDGTASADLLAKVDAALDLETIRPLADEVIVQSSEIVPFQVKATLYLRNSGPGQTEAVNAAISRVQAFVSRAQRQGASVWRTQISALLHVEGVSHLDLEEPAADIVLTAAQAATCTDVIVTAAVDTDNG
complement(721458..721799)         PHAGE_Burkho_phiE202_NC_009234: gp35, phage baseplate assembly protein; AKI39_03190; phage(gi134288768)     2.39e-27            MNAATGRWISGLDHLVQSIGKILTTMIGSRTMRRRFGSKAPDLIDQPGNQATLLRLYAVAATAIMTWDPRVTVKRVSATADAGSPGAYALTVEGDADIDGQTQPFTATSSLRQ
complement(721811..722431)         PHAGE_Ralsto_RSA1_NC_009382: baseplate assembly protein V; AKI39_03195; phage(gi145708093)     3.76e-59            MNAAEIIRLISNLLRIGYVAQTDYDAKKVRVQTGENLTDWIDWKVQRAGTSVTWDPPTVGEQVLLACPEGELAGAIVLMSLYSDGQDAPSNSPDKHLRVYPDGARIEYDFAAGALSATGIKTARVQATVSAEFDCPLTTFKGKVVIEDLLTYQAGMSGTNGKGNRTSIEGDFIQSNGELSSNGVVLDTHDHGGVQRGGSNTDGPNK
complement(722495..722968)         PHAGE_Burkho_phiE202_NC_009234: gp39, phage virion morphogenesis protein; AKI39_03200; phage(gi134288746)     5.50e-46            MGSRAVSDFEHVATWAQGLLARLDPAERRRLNRKVGTDLRRSQGKRIAQQRNPDGSAYEPRKARRATKKGSIRRRAMFAKLRTARYLRVSATDTDLTVGFFGRAARIARVHQDGLVDLVERGGKSVRYPQRVLLAFTDADLSTIQDSILRHLAGHGT
complement(722950..723447)         PHAGE_Ralsto_RSA1_NC_009382: tail completion protein-like protein; AKI39_03205; phage(gi145708090)     2.79e-37            MQKPVELRAFMTAAIETFRTSPEKLQVFVGKGHLVSTGTASLSYEYRYTLTLFATDFNGEPEALMVPLLVWLRRNQPEIFDNTTQRKDAIRFEADILNHDTVDVEIEVDMTERVRVTKGVDARLTVEYVPEPLNPDMPTEDSITEVWAGDQKLAELPMQKWDPEL
complement(723977..724786)         PHAGE_Burkho_phiE202_NC_009234: gp43, bacteriophage-acquired protein; AKI39_03215; phage(gi134288769)     7.24e-77            MDNLLTLGATGRAVADLQQTLNRAGVRAPATGLYDEATAQAVRAIQQRAGLVEDGICGPKTRAYLAGLASGRLLTEQDIADAARALDVPIAAIKAVNNVESRGEGFLPDGRPVILFERHVFWDRLKKAGIDPATVTAPATVLCQERGGYAGGAAEYGRLAIAMRIHEAAALESASWGLFQIMGYHWQAMGYSSVADYVERQKAGEGEQLQALVRFLNANPTLLNALRAQKWPAFAKGYNGADYAANLYDAKLARAFDRFTAMHPAEEPA
complement(724779..725015)         PHAGE_Burkho_KL3_NC_015266: gp34; AKI39_03220; phage(gi327198079)                    2.93e-06            MATALRLLCFRPNGSRHRHGLSAAVTIVVAALACRAASILLRADPVSLPELIIAIALWRAAMASRGNLAHLIRSPIDG
complement(725075..725434)         PHAGE_Burkho_phiE202_NC_009234: gp45, putative bacteriophage membrane protein; AKI39_03225; phage(gi134288749)     2.12e-16            MAEPSTLTATVLNTSAGLSLALILPYVDATAVFGAFMGAAVVASTKKDVRGWTRAMTFLISAICGYFMAPEIVSKTIIDQSFTAAFVGALMVMPISLTILARIDQFDIGAFFRSLGGKL
complement(725443..725646)         PHAGE_Entero_fiAA91_ss_NC_022750: tail protein; AKI39_03230; phage(gi557307592)      6.78e-19            MIAYARQNDTVDAICYRTFGITAGMVELTLELNPGLADLGTVLPEGTEVELPQIQSQPATAPSVKLW
complement(725646..726122)         PHAGE_Burkho_phiE202_NC_009234: gp48, phage head completion protein (GPL); AKI39_03235; phage(gi134288751)     7.44e-32            MPFLASAPPTNEPSAATITNDGWWPDFDLATARQTMRLDGTVTDERLHHALAGAILEVNMDGPVQAWATARAAEGKTKLEDVSAPQVDGVSRLVYLYRRAIYSFATADLIERYVDYDTTASGIKRSELQQCSPDEHRRNGRWAARQLVGASRSTVELI
complement(726209..726916)         PHAGE_Burkho_phiE202_NC_009234: gp1, phage terminase, endonuclease subunit; AKI39_03240; phage(gi134288748)     9.00e-39            MVSPAQRHRERELARARGAATEAGQVVASGAIYDLFLAKLITDMRRLKDIQSTERKIEAKATLVPEYDDYIDGVLLGGSGAQDEVLSTLCIWNIDAGRFARALEIGAYLLAHGIKLPQRYKRDLHTALIDEVADALLIGKVEDPKTVFEIADATDRLTQKFDAPDQARAKLFKVMGAALLSLSCPGVTETETTLLYAQRALEAFERAMQLFPKIGVKKEIEGLQRRLKNHAGNPG
complement(726918..727934)         PHAGE_Burkho_phiE202_NC_009234: gp2, phage major capsid protein, P2 family; AKI39_03245; phage(gi134288740)     9.29e-129           MRNATRTLFSGYLARQAELNGIADASVKFSAAPSVQQTLETRIQESSDFLTRINVIGVQDKAGEKIGLGVSGPASGRTNTSGGAERSTRDLTTLNTDGYDCQKTNFDTHIPYALLDSWAKFPDFQVRITNARIRRQQLDRIMIGFNGTSIAATTDLDANPLLQDVNKGWLQKCRERAPAHVMKEVVAASGKIEVGPGGDYGNLDALVFDMVQLLDPWYQEDPRLVAIVGSGLLHDKYFPIVNTSDKATEKVAADVIMSTKRLGGRPAFSVPYFPPGKVLLTAFENLSLYWQEGARRTHIQDAAKRDRVEFYESSNDDYVVEDYGFVALAENIEIVTGA
complement(727984..728805)         PHAGE_Erwini_ENT90_NC_019932: capsid scaffolding protein; AKI39_03250; phage(gi431810944)     6.70e-67            MPTPKWFTVATEGQTTDGRVIERAWLEQIAQTYSQKTYGARVSVEHLISLIPDSIFRAYGDVTAAQTIETDGKLQLQVQIDPTPELVALSKSRQKIYTSIEVDPNFAKSGKAYLTGLAVTDTPASLGTDILAFAAQNPDKHPYASRKRNADCLFSSALETVFDFADEEPPADDKTPKLFQRLRELLSREKANDADHFKQVEEAVTQLAEHVTAKFTAGDKLLKEMADRFESFASKYVSAEAFNQLKEQLDNTPRSFTPLKPATGTDASQRADC
728958..730712                     PHAGE_Burkho_phiE202_NC_009234: gp4, phage terminase, ATPase subunit; AKI39_03255; phage(gi134288784)     0.0                 MLEIANDLEPRRVARTLYFQGWRVSSIARHLGERRTTVQSWKARDKWDAASVVEKVETALEGRLVQLIAKDKKEGGDYKEIDLLTRQITQMARVRRYDAGGNEADLNPNLERRNAGPKTKPTKNAYSDAQKDKLFQAFKASLFDYQKVWYRNGDQRTRMILKSRQIGATCYFAREAFIDALTTGRNQIFMSASKAQAHVFKQYIIQFAREEADLDLKGDPIVLPNGATLYFLGTNYRTAQSYHGNLYLDEVFWIPRFTELYKVASGMAMHKQWRKTYFSTPSSMAHEAYPLWSGAAFNKRRAKNDQKIIDVSHTALAEGRLCNDKIWRQIVTILDAEKGGCNLFDIDELRDFEYSPDQFDNLLMCNFIDDTASVFPLSMLQGCMVDSWIAWRDVLPLMTRPFGFNPVWIGYDPSHTGDSAGCVVMAPPATPGGKFRILERHQWRGLTFAQQAEKIEQLTKRYTVAHIGIDVTGIGQGVYQLVKQFFPAARAITYSVEVKTRLVMKAVEVMRTKRLEFDAGWTDIAQSFMAIRKTMTASGRSVTYAAGRSEEVSHADLAWACMHAIDNEPLEGETQMNRNVVEIF
730742..731770                     PHAGE_Burkho_phiE202_NC_009234: gp5, phage portal protein, pbsx family; AKI39_03260; phage(gi134288763)     2.12e-166           MDVPQAPAHSTSVQAFSFGEPEPVLNRREILDYIECWNNGRWYEPPVSFAGLAKSFRASTHHSSAIYFKANILASTLRPNPYLSRLTMKKLAVDFQIFGNAYPVRSLSMTGKLLSVESRLAKYVRRGLDMDTYYWVPAYSQEQQFAPDEIFQLIDPDVNQEVYGLPEYLSTLQSAWLNESATLFRRKYYNNGSHAGFILYMNDAAQNQEDIDNVREAMKNAKGPGNFRNLFIYSPNGKKDGIQLIPVSEVAAKDDFFNIKNVTRDDILAAHRVPPQLMGIVPSNTGGFGAIIPAAQVFATNEIEPLQARFMEINDWLGVKAIAFDPYRVDVTVSSGEKPSVT
complement(732759..732938)         hypothetical protein; AKI39_03270                                                    N/A                 MSDNLNDRGPRDRARISLEQDHEVRYWTKELGCSPEQLRQAVKDAGSNSAEKVRAALKK
complement(733017..733406)         hypothetical protein; AKI39_03275                                                    N/A                 MPARPPLTHDDLHRIRLRYEVTPARAPCMFDGAAVERDMAVLLGEVDRLREIVQRARELRDRFPRPGSCLDSIWEEFRRDLEAEPGGRPHLEIPQVLGSSMVDRFVGPPERWQARAAEIGAAKRKPRRR
complement(733445..734167)         PHAGE_Pseudo_F116_NC_006552: hypothetical protein; AKI39_03280; phage(gi56692976)     2.43e-38            MCGRIVQKNNPDDYLEKIIRAPRAGELFPPDPVGPRYNIPPGARPMAFHRFSGGQLEVERIYWGYKPSDWRRAPISNAKTETIAAGKWPWNWLLKEGGRAIVPADGWYEWKWLTDDPKGPKVPYFIHHANDEPLFLAAVCAWRPGREHGKEHGMAIVTNDTQGGMVDMHDRRPVALPPELAVEWVDPATTLTRAREILAHALPESAFTWHRVRQEVGNYRYERPDAIEPVEQGQQPFALE
736840..736868                     attR                                                                                 N/A                 CCCCTCTGTCCGCCAAGAACATTCCTCAG
