gi|00000000|ref|CP012472.1|  Enterococcus faecium strain ISMMS_VRE_10 plasmid ISMMS_VRE10_p1 215120, gc%: 35.22%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
132761..132772                     attL                                                                                 N/A                 ACACAAAATATT
complement(135000..135680)         PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; AL024_14740; phage(gi985761246)     1.56e-89            EnterococcusfaeciumMNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRDINVSHTTIYRWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEYGFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRGLYKKTRKEGTLFGFSVCTEIKVLLGIPA
135732..135754                     attL                                                                                 N/A                 ATTTAAAACTTTGCAACAGAACC
135732..135754                     attL                                                                                 N/A                 ATTTAAAACTTTGCAACAGAACC
135732..135754                     attL                                                                                 N/A                 ATTTAAAACTTTGCAACAGAACC
135811..136263                     hypothetical protein; AL024_14745                                                    N/A                 EnterococcusfaeciumMKKTILSIFSVFTILIGGYFLLNLDSVNSNAQIKDQRVAEHNNKKMSLTKNIYSMSDEELYKEFGDLSGEQLEESIPGISDSDKIVVLSAGGQLMGDGKSELVSYKQNHRQFIDVNTDSNAISIKDLKELLNSKRNELKQIKETNSVELE
136277..136966                     hypothetical protein; AL024_14750                                                    N/A                 EnterococcusfaeciumMKKIFGVSVGLLMMLTFGNAVYAAEKEVISDPEQYASRYFADFEEEDKVLALPEGGFLKGEAKIVSMDNPDIIQGSYNSETDPASVSVTEAKKIVAEKFKNDIETTPIMPRGAFPPDVGTSGHLLVLAGGGSYKSQPFSGAGWRFGGMGVKPADGTGNFLRWKSYIDDGRVGNVNQANATKSGSIQGMALYAREGFKYFAPNGPGWTMNIGIYYTYNPVAGTYYVVQNI
137091..139442                     peptidoglycan-binding protein; AL024_14755                                           N/A                 EnterococcusfaeciumMDEMVLSTQKWLNKKYSNVTGFDKVPENGRTGWPTIYGLIEGLQVELGITNLVANFGPTTEKMYDNQVTPKWGKNLPKNIVFLIQGAFWCKGINPGGFDGVYTPYLDTAVKELQTDAGFNGSAVTGVLDAKWAKALFDMSAFVLVPGGDSKIRKMQQWLNVNYLEYTGIMPCDGIYQRNSNQALIFALQAELGYSPSEATGSYGNGTTSKTYPVSEGNSGNYVRIIQYGLYVNGYFEDGTFDGIFTKYMGLEVLAFRKFMVLPEYTEIADVVVIKGLLSSAGDIRRSADGADTSTQLTRSQIQTLVDNDIKIVGRYLTGTVGIGKDERNKYLTTEELNNIFSKNLSVFPIYQDGGAALAYFTYDRGLSDGKKAIDAAKNLNIPLTTVIYFAVDLDMLGEEILAYAGEYFKGVSAVMSYSGYQTGVYGTRNVCSQIINNGYASFAFVSDMSTGYSGNLGFPMPRQWSFDQFVEFTIGSGNGAVGIDLIATSGRDSGFNELSNDTNNDNYIAKYNQKVINQMVRAYQYLSQAGLDNPWNPHLTFYRYVNYSGLSWDIISSPVTEHDRKIYDEYRNKLTNSEGLYNYFIDPNTGSIIGLPHLIVTLQSQMFLADTINDSVSDFAGWLGDLMTCWGEVKKLGIQMEQGVFALVGTAAGGTFSLEDLYQDVDAVNVYTLAKRNSDSTALSALKTYYCDKGAIDRFNQFVKNRFGSSDKIASVTNSLLENDETVDILGVGIISFFIDKIVNNSLGTDFTYLDFIGDEGKVANGFSEKIIQFQENRSKLN
139522..139917                     hypothetical protein; AL024_14760                                                    N/A                 EnterococcusfaeciumMMIMEEIEWNNLTQNNKNNSGCGIIFMFVIVLGIVVLLITVKIVDYFANTPEEQIQRKLPEFERVPPYDPRDNSFQVKKLKESPNEMWFEVTVESSDFKEKKKEYNYIVKAKVSKRFIFNPKLEIYSVVIE
140242..140859                     PHAGE_Vibrio_PWH3a_P1_NC_020863: resolvase domain-containing protein; AL024_14765; phage(gi472342379)     4.86e-18            EnterococcusfaeciumMRKFFYIRVSSYDQSIERQLISAKELGIPEEYIFVEKASGKDFKRPEYQLMKRMFRKGDLLYLQSLDRLGRNKQMILEEWRELTKEKQIDISVLDMPLLDTASYKQLDGLETLISDLILQLLSYMAEDERKRINSRQREGVEAAKQKGVKFGRKKIALPPEFPAIYSDWKAGKITAVYAMDQLGMKRNTFYRRVKEYEHTLHHFS
140900..141199                     PHAGE_Strept_phiARI0923_NC_030946: membrane-associated initiation of head vertex; AL024_14770; phage(gi100034)     2.32e-05            EnterococcusfaeciumMDLTNQRVVFTGTLQQMTRTQAIGLVHSLNGHCQSSVTSKTNFLVCGQYSKSLFDDSLYTKKEQTARDLIALGHEITILSEVEFYALISQQLKEWQRYL
141233..141400                     transcriptional regulator; AL024_14775                                               N/A                 EnterococcusfaeciumMKRKSYDRWGIEITSFNRNIAFHVECDCGELAKSVYQKNYFYCPKCHRRYGVHGT
complement(141445..142008)         PHAGE_Clostr_vB_CpeS_CP51_NC_021325: putative resolvase; AL024_14780; phage(gi509140089)     3.32e-21            EnterococcusfaeciumMIFKLRNRTEGLNIDKLFQEKASGKDTERPEFQKLLNYIREGDCVIVTSLDRLGRDYEDIKNTVAFMKQKKVALKILDAQFLDFNTGNELLDTAMFDMFLSLLSYIAQNEREKIRERQRQGVLLAQKAGRYKGRPIEYSINSTDPQKRLVFKTVVDMLKQGIPVAEIAKENGISRPTIYKIKKANDL
complement(142036..142716)         PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; AL024_14785; phage(gi985761246)     1.98e-89            EnterococcusfaeciumMNHFKGKQFKKDVIIVAVGYYLRYNLSYREVQELLYDRGINVCHTTIYRWVQEYSKVLYYLWKKKNRQSFYSWKMDETYIKIKGRWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLHKQFGEPKAIVTDKAPSLGSAFRKLQSVGLYTKTEHRTVKYLNNLIEQDHRPIKRRNKFYQSLRTASSTIKGMETIRGIYKKNRRNGTLFGFSVSTEIKVLMGITA
143198..143220                     attR                                                                                 N/A                 ATTTAAAACTTTGCAACAGAACC
143261..143812                     mobilization protein; AL024_14795                                                    N/A                 EnterococcusfaeciumMKRLEASTSNFNNKLDVFEEKTKHARLNFETTAKHYIKRLDEDNLKLDFQQAIQDELSDTKDEIREVTKQAREETKEYKEILESKIKDHNKVVDKSNTALKVMTKGVTNIFFVLIIFVLVMLVTGPIGHFFGIEHLYSFINGFIDDHESAWRYLMLILYAVPYVFFAIILWLIALFFRVFNDL
144488..144754                     hypothetical protein; AL024_14800                                                    N/A                 EnterococcusfaeciumMAKITKNEQENLVENYTKKPAYSNSRLDAHFVCTSNPKLSFDAMTIVGNLNKNSAKKLSDFMSLDPQIRLWDILQTKFKAKALQDPLC
144872..145324                     transposase; AL024_14805                                                             N/A                 EnterococcusfaeciumMMPPENRGIRQLSQTLGIPEATLCSWRKKARIQGNTTPGTKKNVEKWSSEDKFLIVMESFSMNQVELAEYCRKKGLFKEQIEAWKKTCLSANEQEENRTRELATELKEEKKQARQLEKELRHKEKALAEAAALLLLRKKAHAIWGDQEEE
145321..146358                     PROPHAGE_Lactoc_Il1403: transposase of IS904H; AL024_14810; phage(gi15674055)        1.13e-18            EnterococcusfaeciumMISSSDRKQAVELIQEANRNGARLTYACNELNISVRTYERWTREGTIAHDQRPLAKRPVPKNKLTDQEREKIIETVSKKEFMNLPPSQIVPKLADCSIYIASESSFYRVLREKNMQHHRGRSQVSQKRIPPSHLATKPNEVWTWDITWLKGPIKGLFYRLYLIIDLFSRKMVGWEIWESEEARHAEKLIKQTVLKERIQGQPLVLHSDNGSPMKAATFQVLLEKLGIQSSYSRPRVSNDNPYSEAAFRTLKYRPEYPNNGFKTIDDARKWTKEFVDWYNDSHLHSGIQFVSPAACHEGRHLAILEKRKQVYEDAKKRHPERWSKGVRNWTPHQSVALNPLKETES
146479..146694                     PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; AL024_14815; phage(gi985761246)     1.89e-11            EnterococcusfaeciumMENKNTTTILTNTDHRPVKRRNKFYRSLRTASTTIKGMEAIRGLYKKTRKEGTLFGFSVCTEIKVLLGIPA
146726..146748                     attR                                                                                 N/A                 ATTTAAAACTTTGCAACAGAACC
146851..148059                     PHAGE_Staphy_SPbeta_like_NC_029119: bifunctional AAC/APH; AL024_14820; phage(gi985761240)     0.0                 EnterococcusfaeciumMYDELYTDYHYPKTDEIVYGMDQFIGEPNYWSKGIGTRYIKLIFEFLKKERNANAVILDPHKNNPRAIRAYQKSGFRIIEDLPEHELHEGKKEDCYLMEYRYDDNATNVKAMKYLIEHYFDNFKVDSIEIIGSGYDSVAYLVNNEYIFKTKFSTNKKKGYAKEKAIYNFLNTNLETNVKIPNIEYSYISDELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNKQNVLEEYILLRETIYNDLTDIEKDYIESFMERLNATTVFEGKKCLCHNDFSCNHLLLDGNNRLTGIIDFGDSGIIDEYCDFIYLLEDSEEEIGTNFGEDILRMYGNIDIEKAKEYQDIVEEYYPIETIVYGIKNIKQEFIENGRKEIYKRTYKD
complement(148189..149361)         PHAGE_Staphy_SPbeta_like_NC_029119: transposase mutator family; AL024_14825; phage(gi985761243)     0.0                 EnterococcusfaeciumMTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTEYIQAKEYERTENRQSQRNGYYERSFTTRVGTLELKVPRTRDGHFSPTVFERYQRNEKALMASMLEMYVSGVSTRKVSKIVEELCGKSVSKSFVSSLTEQLEPMVNEWQNRLLSEKNYPYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIGFMIQSGESEETWTTFFEYLKERGLQGTELVISDAHKGLVSAIRKSFTNVSWQRCQVHFLRNIFTTIPKKNSKSFREAVKGIFKFTDINLAREAKNRLIHDYIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRLKSTNLIERLNQEVRRREKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK
149991..150671                     PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; AL024_14830; phage(gi985761246)     6.38e-90            EnterococcusfaeciumMNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGLTLDIWLSKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEYGFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRGLYKKTRKEGTLFGFSVCTEIKVLLGIPA
150703..150725                     attR                                                                                 N/A                 ATTTAAAACTTTGCAACAGAACC
complement(151011..152180)         PROPHAGE_Escher_CFT073: transposase; AL024_14835; phage(gi26246249)                  5.76e-62            EnterococcusfaeciumMTKFTIEIMQTLLNKGDLDELFQDHLERAINSLLQAELTAFLDYEKYDRNGFNSGNSRNGNYSRTFKTEYGELNLTIPRDRNGEFSQQTLPAYKRTNDSLETTIIQLFQKGITMAEISKLIEKMYGHHYTPQTISNMSKLVAEDVLAFKERTLEANYSVIFMDATHIPVKRQTVSKEAVYITIGIRLDGTKEVLGFTIAPTESAYIWKEVLQDLRKRGLEEVLLVVTDGLSCIEESIHSVYPNAQFQQCCVHVSRNIAHKVRVRGRKEICEDFKLVYQANSKEEALDHIDFMTRKWKKQYPRVVNLLLNPALLTFYNFPHAIRRTIYSTNLIEGFNKQLKRYTRRKEQFPNEESLERFFISQFNQYNQKFLGRIHKGFKEIQDTLESMI
complement(152386..153933)         PROPHAGE_Pseudo_KT2440: ISPpu13, transposase Orf2; AL024_14840; phage(gi26989833)     2.15e-61            EnterococcusfaeciumMETTDTLLQLLQEAHKTNQAQQQTIQNLTTEIQLLNEKVNYLTNKLFGRSKETLFEETNGQLNLFSDEEISVSVPEAAATIIPVKGHQRVVGTKADKIKHLPITEKEHLLPLEEQFCEHCGSQMKDIGRTKVREEIRFHQAMLDCLTHYQHTYCCKSCEKEGLSSFKKAIVPKPLISNSLGSNSLVAETIRMKFGQKVPAYRQENYWKQTHGLDISRDNITNWHIKAVQNALDPLGERLRVYLNQEEILHGDETSYRVIESAKTDTYYWQFCTGKDSQHPIVYYHHDESRAGDVPKTFLKEFTGYLHCDGYSGYNAVESVRLVYCFAHVRRKFFEAIPKGKKNTDIPAAQAVKQLDKWFVLEKKWKDFSPEKRLSCRQQELRPLFIAFYEWMATIDPVAKSKLDAAVQYACKLRSGFEPIFEDGRLELTNNRAERNIKELVIGRKNWLHSTSLEGARTSGIILSVYKTAELNGLNPVKYLEFLFDKIPNLPVLSAETLDQLLPWNKDVQQHFSRN
complement(154035..154388)         PHAGE_Stx2_c_1717_NC_011357: transposase; AL024_14845; phage(gi209447152)            6.65e-18            EnterococcusfaeciumMLYDLLQTKHIYIVCGKTDLRKGIDGLASLIQQEYQLELYEDAVFLFCGNRQDRFKLLYWDGDGFLLCYKRIENGKLKWPRTKDEVRTLTNQQVRWLLEGLSIDQPRAILPGKKGVF
160599..160610                     attR                                                                                 N/A                 ACACAAAATATT

#### region 2 ####
157940..158230                     PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; AL024_14875; phage(gi48697273)     8.22e-10            EnterococcusfaeciumMSRRQRRTYSKEFKQQIVNLYLAGKPRAEIIREYELTPSSFDKWMKQAQSTGSFKKRDNLTPEQAELIALRKKNKQLEMENDILKQAALIFGRKDK
158402..158821                     PHAGE_Bacter_Diva_NC_028788: transposase-like protein; AL024_14880; phage(gi971743572)     3.05e-42            EnterococcusfaeciumMKRRGLTSTYTIAHFKGQRTACNEAKTANVLDRTFTQEQPLEAIVTDLTYVRVGKKWHYICLILDLFNREIIGYSCGEKKDASLVKEAFGRIPYSLTDVKLFHTDRGKEFDNQTIHEILNGLVIKFFSTIRMEEFDFLK
complement(159335..160513)         PROPHAGE_Escher_CFT073: transposase; AL024_14890; phage(gi26246249)                  8.70e-61            EnterococcusfaeciumMNDFTTEIVQTLVTKGGLNELFRSHLEKAINTLLRTELTAFLDYEKYDRTGFNSGNSRNGSYFRSIKTEYGELTLEIPRDRNGEFKQQTLPAYKRTNDTLETTIIHLFEKGVTMSEIADLIEKMYGHHYTPQTMSNMTKVLTEEVNAFKSRALNDKYVAIFMDATYIPLKRQTVSKEAIYIAIGIREDGTKEVLSYAIAPTESTYVWNELLQDINSRGVQEVLLFITDGLKGMKDTIHQIYPKAKYQHCCIHVSRNIAHKVRVKDRKEICDDFKAVYQANSKEEANTFLSGMIEKWKKNYPKVTQSLIENQDLLTFYDFPPSIRRTIYSTNLIESFNKQIKRYSRRKEQFQNEESLERFLVSIFDTYNQKFLNRSHKGFQQVTDTLVSMFTE
160764..161024                     hypothetical protein; AL024_14895                                                    N/A                 EnterococcusfaeciumMKKIDLINMIGMLIGILVNIVIFTDWLGVLFSNLIPILIIGICGIILSILELFESRNTMNRIFACIILIVNLLPMVYFTFLYFALG
161298..162590                     PROPHAGE_Shewan_MR-1: ISSod4, transposase; AL024_14900; phage(gi24373869)            8.15e-100           EnterococcusfaeciumMARKKRNPDAEKLAESILNAYQPESVDDMQDALKDVFGPLFEKMLQGELNNHLGYDAHSKEPKEHDNRRNGYGTKTLKTSFGEVAIDVPRDREASFEPELIPKRKRDVSDIEGKVLSMYARGMSQRDIAATVEAIYGFDISHEMISDITDAVLPELEEWQARPLAKCYAFLFVDCMYVTLRENYEAKEYAVYTILGYDLKGNKEILGLWLNQTESKNRWMQVFDELKARGVEDVFFISMDGVSGLEEGAKAIFPSVIVQRCIVHLVRNALRYIPSKDYKEVCRDMKKFYGASSLNAAHAAFDSFQNRWSHYSGAVDVWKRNFAHVEQLFDYGSAIRKIMYTTNAVESVHSSFRKVTKKGAFSNENALLKLLYLRTKELHAKWSGGRIQNWAMVLNQLMINETFSSRMKSMRFTFRNNGRFIQLCVRSKFI
163159..163449                     PHAGE_Paenib_Shelly_NC_041909: membrane-associated initiation of head vertex; AL024_14905; phage(gi100034)     1.04e-33            EnterococcusfaeciumMSKRTRRTFSQEFKQQIVNLYLAGKPRVEIIREYELTASAFDKWVKQSKTSGSFKEKDNLTPEQKELLELRKRNQQLEMENDILKQAALIFGRRDK
163485..164321                     PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; AL024_14910; phage(gi48697274)     6.86e-35            EnterococcusfaeciumMCRILGLSRQSYYYQSKPKKDESELEEVVAEEFIRSRKAYGSRKIKKALSKRGIQISRRKISRIMKNRGLKSSYTVAYFKVHHSTCNEAKTTNVLNRKFLRDNPLEAIVTDLTYVRVGKKWNYVCFILDLFNREILGYSCGEHKDAVLVKKAFSRIKQPLTEVEIFHTDRGKEFDNQAIDELLTTFDINRSLSHKGCPFDNAVAESTYKSLKVEFVYQYTFETLQQLDLELFDYVNWWNHLRLHGTLGYETPVGYRNQKLAQRILDNELGCANASEAV
