gi|00000000|ref|CP012493.1|  Escherichia coli strain CFSAN004176 plasmid pCFSAN004176G_02, 52297, gc%: 46.61%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
23885..23925                       attL                                                                                 N/A                 AAACCCTTGTCGGGACCACTCCGACCGCGCACAGAAGCTCT
30127..30621                       PHAGE_Mycoba_Squirty_NC_026588: non-functional integrase; BCV59_27505; phage(gi764159894)     2.46e-07            EscherichiacoliMPQKTAQALLVRTAGRMPAGQQTHRLVQLSDSWYVSQLQTIVATLKIPMERRNKRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFSMTESDAVTTLKNRHA
complement(30759..31034)           CopG family transcriptional regulator; BCV59_27510                                   N/A                 EscherichiacoliMVKKPSQQALNRAAVTVEQAEALAQRLADKPYGAPEKPEPEKQCRTTISLSESMLVTIEDLALRNKRNGKDPKNVSAIVRVALEQYLKTLT
complement(31028..31672)           PHAGE_Sodali_phiSG1_NC_007902: ParA-like protein; BCV59_27515; phage(gi89886027)     1.26e-19            EscherichiacoliMITVVGGNKGGSGKTTISSNLAIALANKGREVCLLNGDLQRTAAKHHAEREAAGLLPAITLVEKFDNLTQTLQALNEKFDDVIVDVAGRNSKEFITSGVVAHQIIAPLQCSQPDLDTLTELEQQIDAMRNLNPELKVYCLQSMATTNPVLRGNERKEFLEYLEEFPTIQVLDSVICFRKVYRDCMSNGTGVVETNNTAARAEIEHLMNEVFGPW
31901..32872                       PHAGE_Entero_P88_NC_026014: recombinase; BCV59_27520; phage(gi744692717)             4.52e-74            EscherichiacoliMNVYCDDGSTTIKLAWNDNGKICKSLSQNSFRHGWKVDGLGIRQTFNYELDGKKYTYDEVSNQSILTTHIEYQYTDVNLLAVHHALLNSGLAPQPVSLTVTLPISEFYTKECQKNELNIQRKIENLMRPIRLNKGDVFTIEHVDVMPESLPAVFSRLVMDKVGQFEKSLVVDIGGTTLDVGVIVGQFDSVSAIHGNSGIGVSSVTKAAMSALRMASSDTSFLVADELIKRRNDPDFVRQVINDETKTDLVLNTIEGAIASLGEQVVNELGDFHHVNRVYVVGGGAPLIYDSIKTAWHHLGQKVVMMESPQTALVEAIAAFKEE
32877..33269                       plasmid stability protein; BCV59_27525                                               N/A                 EscherichiacoliMDDERKRKKYTLYLHPEKAADFQTLEAIESVPRSERGELFRNAFISGMALHQLDPRLPVLLTAILSEEFSADQVVTLLSQTTGWKPSQADIRAVLTELGASQSAEKMPPSATDSVQEAMNDVRLKMKKLF
complement(33274..34533)           PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; BCV59_27530; phage(gi431811050)     6.29e-178           EscherichiacoliMFALADINSFYASCEKVFRPDLRNEPVIVLSNNDGCVIARSPEAKALGIRMGQPWFQVRQMRLEKKIHVFSSNYALYHSMSQRVMAVLESLSPAVEPYSIDEMRGINHCISPEFFGHQLREQVKSWTGLTMGVGIAPTKTLAKSAQWATKQWPQFSGVVALTAENRNRILKLLGLQPVGEVWGVGRRLTEKLNALGINTALQLAQANTAFIRKNFSVILERTVRELNGESCISLEKAPPAKQQIVCSRSFGERITDKDAMHQAVVQYAERAAEKLRGERQYCRQVMTFVRTSPFAVKDPCYSNAAVEKLSLPTQDSRDIIAAACRALNHVWREGYRYMKAGVMLADFTPSGIAQPGLFDEIQPRKNSEKLMKTLDELNQSGKGKVWFAGRGTAPEWQMKQEMLSPSYTTQWTEIPIASF
complement(34533..34969)           protein impA'; BCV59_27535                                                           N/A                 EscherichiacoliMSTVYHRPADPSGDDSYVRPLFADVARPVFLRLPLIMLSRNWITAIASADLQPPSFCAPAVNRTRLACRMVICWWTGPKNHNTGTSLSLRSTVSSPSNDCCCAHARHWSRFQTARSSAHCIRKTSVFLVLSLTYTGRGSYAGA
complement(34966..35214)           PHAGE_Sodali_phiSG1_NC_007902: ImpC protein; BCV59_27540; phage(gi89886014)          1.49e-20            EscherichiacoliMIRIEILFDRQSTKNLKSGTLQALQNEIEQRLKPHYPEIWLRIDQGSAPSVSVTGARNDKDKERILSLLEEIWQDDSWLPAA
35609..36535                       hypothetical protein; BCV59_27545                                                    N/A                 EscherichiacoliMPNWCSNRMYFSGEPAQIAEIKRLASGAVTPLYRRATNEGIQLFLTGSAGLLQTTEDVRFEPCPGLTAAGRGVVSPENIAFTRWLTYLQDGVLLDEQNCLMLHELWLQSGTGQRRWEGLPDDVRDTITALFTAKRGDWCGFWSNEDVSVWWNRLCDNVLPEKTMPFDLLTVLPTRLDVEVNGFNGGVLNGVPSAYHWYTERYGVKWPVGYEVNISSQGDNFIQVDFDTPWCQPESDVIAELSRRFSCTLEHWYAEQGCDFCGWQLYERGELVDVLWGELEWSSPTDDDELPEVTGPAWIVDNVAHYGG
36532..36843                       hypothetical protein; BCV59_27550                                                    N/A                 EscherichiacoliMKYDGDGRATARFFSGKGCRRAPLFTAPADAARHKRCLWSVSRVRRARDGRFYRSRLASVTVYASPSPFSDERPSSRFRGITLPSKRRRLRYSTVGLTRYRTR
36920..37603                       PHAGE_Staphy_Stau2_NC_030933: aerobic ribonucleotide reductase B subunit; BCV59_27555; phage(gi100063)     4.08e-29            EscherichiacoliMSRFVLGNCIDVMARIPDNAIDLILTDPPYLVGFRDRSGRTIAGDKTDEWLQPACNEMFRVLKKDALMVSFYGWNRVDRFMAAWKNEGFSVVGHLVFTKNYTSKAAYVGYRHECAYILAKGRPRLPQNPLPDVLGWKYSGNRHHPTEKPVTSLQPLIESFTHPNAIVLDPFAGSGSTCVAALQSGRRYIGIELLEQYHRAGQQRLAAVQRAMQQGAANDNWFEPEAA
48695..48735                       attR                                                                                 N/A                 AAACCCTTGTCGGGACCACTCCGACCGCGCACAGAAGCTCT

#### region 2 ####
39341..40087                       PHAGE_Xantho_Cf1c_NC_001396: hypothetical protein; BCV59_27565; phage(gi17975752)     7.55e-05            EscherichiacoliMTTDNTNTTRNNSLAARTDTWLQSLLVWSPGQRDIIKTVALVLMVLDHANRILHLDQTWMFLTGRGAFPLFALVWGLNLSRHAHIRQPAINRLWGWAVIAQFAYYVAGFPWYEGNILFAFAVAAQVLTWCETRSLWRSVGAMLLLAVWLPLSGTSYGIAGLLMLAVSYRLYRAEDRTVRLALVACLLAVIPALNLATSDAAAVAGLVMTVLTVALVSCAGKSPRFWPGDVFPVFYICHLTVLGVLVV
40146..41006                       hypothetical protein; BCV59_27570                                                    N/A                 EscherichiacoliMKITDHKLPEGIALTFRVPEGNIKHPLIILCHGFCGIRNVLLPSFANAFTEAGFATITFDYRGFGESEGERGRLVPAMQTEDIISVINWAGQQECIDNQRIGLWGTSLGGCHVFSAAEQDQRVKCIVSQLAFADGDVLVTGGMSEPEKVSFLSTLNKMAEKKKNTGKEMFVGVTRVLSDNESKVFFEKVKVRHPEMDIKIPFLTVMETLQYKPAESAARVQCPVLVVIAGQDSVNPPEQGRALYDAVASGTKELYEEAGACHYDIYEGEFFERVAAVQTQWFKKHL
complement(41172..41885)           PROPHAGE_Escher_CFT073: transposase insF; BCV59_27575; phage(gi26249410)             3.78e-178           EscherichiacoliMAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNSNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA
complement(42026..42328)           PROPHAGE_Xantho_33913: ISxac3 transposase; BCV59_27580; phage(gi21231087)            2.41e-12            EscherichiacoliMSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR
complement(42391..43545)           PHAGE_Stx2_c_1717_NC_011357: transposase; BCV59_27585; phage(gi209447153)            3.67e-152           EscherichiacoliMSQKYLIRIAELERLLSEQAEALRQKDQQLSLVEETEAFLRSALTRAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVELAEALLKQREQDSDRYSGREDDPQVPRQLRQSRHRRPLPAHLPREIHRLEPEESCCPECGGELDYLGEVSAEQLELVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNWVDACCQLMTPVNDALYRYVMNTRKVHTDDTPVKVLAPGQKKAKTGRIWTYVRDDRNVGSSSPPAVWFAYSPNRQGKHPEQHLRPFRGILQADAFTGYDRLFSAEREGGALTEVACWAHARRKIHDVYISSKSATAEEALKRISEL
complement(43576..43926)           PHAGE_Stx2_c_1717_NC_011357: transposase; BCV59_27590; phage(gi209447152)            5.39e-51            EscherichiacoliMISLPSGTRIWLVAGVTDMRKSFNGLGEQVQHVLNDNPFSGHLFIFRGRRGDTVKILWADADGLCLFTKRLEEGQFIWPAVRDGKVSITRSQLAMLLDKLDWRQPKTSSRNSLTML
complement(43923..44348)           PHAGE_Stx2_c_1717_NC_011357: truncated transposase; BCV59_27595; phage(gi209447151)     1.29e-15            EscherichiacoliMELQDWRKEPRKNYSNEFKLRMVELASQPGACVAQIARENGVNDNVIFKWLRLWQNEGRVSRRLPVTTSSDTGVELLPVEITPDEQKEPVAAIAPSLSTSTQTRVSASSCKVEFRHGNMTLENPSPELLTVLIRELTGRGR
45045..45506                       PHAGE_Mycoba_Adler_NC_023591: hypothetical protein; BCV59_27600; phage(gi589892236)     2.74e-11            EscherichiacoliMRKYIPLVLFIFSWPVLSADIHGRVVRVLDGDTIEVMDSRKAVRIRLVNIDAPEKKQDYGRWSTDMMKSLVAGKTVTVTYFQRDRYGRIPGQVYAPDGMNINQFMVRAGAAWVYEQYNTDPVLPVLQNEARQQKRGLWSDADPVPPWIWRHRK
