gi|00000000|ref|CP012501.1|  Escherichia coli strain 08-00022 plasmid pCFSAN004179G, complete 242187, gc%: 47.03%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
517..529                           attL                                                                                 N/A                 AAATGAATGGATT
1837..1986                         PHAGE_Entero_933W_NC_000924: host killer protein; CP48_p00035; phage(gi9632541)      9.72e-06            MTKYALIGLLAVCATVLCFSLIFRERLCELNIHRGNTVVQVTLAYEARK
2270..2518                         replication regulatory protein repA2; CP48_p00045                                    N/A                 MSQTENAVTSSSGTKRAYRKGNPLTLAERQQASLARKRATHKELRVFIPAALKAQLQEMCEAEGVTQAEMIAELIKQKSAFS
2829..3686                         IncFII family plasmid replication initiator RepA; CP48_p00055                        N/A                 MAELQQTYYRQVKNPNPVFTPREGAGTLPFCEKLMEKAVGFTSRFDFAIHVAHARSRGLRRRMPPVLRRRAIDALLQGLCFHYDPLANRVQCSITTLAIECGLATESAAGKLSITRATRALTFLAELGLITYQTEYDPLIGCYIPTDITFTPALFAALDVSEEAVASARRSRVEWENRQRKKQGLDTLAMDELIAKAWRFVRERFRSYQTELKSRGIKRARARRDADRQRQDIVTLVKRQLTREIAEGRFTGNHEAVKREVERRVKERMILSRNRNYSRLATASP
4659..4883                         PHAGE_Entero_N15_NC_001901: gp49; CP48_p00060; phage(gi9630516)                      8.15e-20            MFNVITHPTALDELLELPDNLRGRMARRIERLEQEGNKMKMPHSVLTPKSWTVKHEAYRSDSDIQLESDLLISG
complement(5665..6186)             PROPHAGE_Escher_MG1655: IS150 transposase A; CP48_p00070; phage(gi16131428)          6.06e-123           MSKPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVALYEKHGEKGLIPKPKGVSADPELRIKVVKAVIEQHMSLNQAAAHFMLAGSGSVARWLKVYEERGEAGLRALNIGIKRNIAISVDPEKAASALELSKDRRIEDLERQVRFLETRLMYLKKLKALAHPTKK
6220..6417                         PHAGE_Entero_N15_NC_001901: gp49; CP48_p00075; phage(gi9630516)                      2.29e-34            MGAVHSRVIGGGLFELRVGDKNIARTLYAYATGNEIYLLHAFVKKTQKTPTKAIEIARMRLKEMK
6417..6704                         PHAGE_Entero_N15_NC_001901: gp48; CP48_p00080; phage(gi9630515)                      2.72e-58            MKVKGVPFSQVKQKLLNTPEAVKGYEDADKELEMVEMLYEMREKAGLTKSALAERMGLRPSAISRLESNPLGASMKTLTKYAQACGATIDIHAVY
7544..8716                         PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; CP48_p00090; phage(gi557307612)     0.0                 MLSREDFYMIKQMRQQGAYIVDIATQIGCSERTVRRYLKYPEPPARKTRHKMVKLKPFMDYIDMRLAENVWNSEVIFAEIKAMGYTGGRSMLRYYIQPKRKMRPSKRTVRFETQPGYQLQHDWGEVEVEVAGQRCKVNFAVNTLGFSRRFHVFAAPKQDAEHTYESLVRAFRYFGGCVKTVLVDNQKAAVLKNNNGKVVFNSGFLLLADHYHFLPRACRPRRARTKGKVERMVKYLKENFFVRYRRFDSFTHVNQQLEQWIADVADKRELRQFKETPEQRFALEQEHLQPLPDTDFDTSYFDIRHVSWDSYIEVGGNRYSVPEALCGQPVSIRISLDDELRIYSNEKLVASHRLCSASSGWQTVPEHHAPLWQQVSQVEHRPLSACEELL
11292..11304                       attR                                                                                 N/A                 AAATGAATGGATT

#### region 2 ####
68217..68237                       attL                                                                                 N/A                 GCTCAGTCCGGTTGGTGATTT
76623..77363                       PHAGE_Brevib_Jenst_NC_028805: putative recombinase XerD; CP48_p00525; phage(gi971744895)     4.68e-05            MNNVIPLQNSPERVSLLPIAPGVDFATALSLRRMATSTGVTPAYLLAPEVSALLFYMPDQRHHMLFATLWNTGMRIGESRMLTPESFDLDGVRPFVRILSEKVRARRGRPPKDEVRLVPLTDISYVRQMESWMITTRPRRREPLWAVTDETMRNWLKQAVRRAEADGVHFSIPVTPHTFRHSYIMHMLYHRQPRKVIQALAGHRDPRSMEVYTRVFALDMAATLAVPFTGDGRDAAEILRTLPPLK
complement(77648..78625)           PHAGE_Salmon_SSU5_NC_018843: putative replication protein RepA; CP48_p00530; phage(gi410491479)     7.10e-136           MDKSSGELVTLTPNNNNTVQPVALMRLGVFVPTLKSLKNSKKNTLSRTDATEELTRLSLARAEGFDKVEITGPRLDMDNDFKTWVGIIHSFARHNVIGDKVELPFVEFAKLCGIPSSQSSRRLRERISPSLKRIAGTVISFSRTDEKHTREYITHLVQSAYYDTERDIVQLQADPRLFELYQFDRKVLLQLKAINALKRRESAQALYTFIESLPRDPAPISLARLRARLNLKSPVFSQNQTVRRAMEQLREIGYLDYTEIQRGRTKFFCIHYRRPRLKAPNDESKENPLPPSSAEKVSPEMAEKLALLEKLGITLDDLEKLFKSR
79225..79455                       PROPHAGE_Ralsto_GMI1000: isrso11-transposase orfb protein; CP48_p00535; phage(gi17546155)     3.43e-06            MFVSMPQGSCIQTTGKVWLSQAVGCFNGKIVSWSLSTPPDAELVNTILNNVVERLNAVERAVIHRDRGGIIAGRKE
79504..79749                       hypothetical protein; CP48_p00540                                                    N/A                 MGVNSRASRRKLHAASGCLRTANNAGQNDKAVQEIVRIPKTVKAREVYISICRNISSPVRSLRSVTSLRRALPDSDSNIAA
80167..80799                       PHAGE_Rhizob_RHEph10_NC_034248: hypothetical protein; CP48_p00545; phage(gi100154)     5.74e-41            MAWIVGFISQKGGVGKSTKARALAREASACGIKTKLADLDLEQATSAEWHRRRLSAGLSPVASVEVFSTARQAIESAGDFDLLILDGPARASKGTSEIAKVADLIVQPTGASLDDLVPAIKVFNALVKEGVPRSKLVFALSRVGTEAEELDARAYISEAGYETLSGCLFEKPAYRKAMNSGLAVTETRYKGLNERADELIQALIDKIGEE
80958..81161                       hypothetical protein; CP48_p00550                                                    N/A                 MVTQIVTEAYTRRDGRSARKTNRTLAFATRVTPAFDQEIRDIAEREGLKLVEVLEKAVEAYKEKQGY
complement(81314..81583)           PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; CP48_p00555; phage(gi41057343)     5.65e-59            MWRYQITQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNAVASFC
81827..82327                       PROPHAGE_Ralsto_GMI1000: ISRSO11-transposase ORFA protein; CP48_p00560; phage(gi17546156)     1.15e-18            MSKFSLEFKREVSEKYLEGELSLKSVGKMYNIDPSTVRKWAYVYRKHGLKTLTGQKRRYDDNFRLNVVRDVIDNSLSIREAAVKYGIPAFNTISKWIKKYSEVDFSMKGQKEDLRPKTPAVYQRSRSTQLTISEREELELLRVENAYLKKLKALAQEKLRLEQKKK
82333..83166                       PROPHAGE_Escher_MG1655: IS150 transposase B; CP48_p00565; phage(gi16131429)          2.32e-113           MNELRQCHPLSQLLVIADLPRSTFYYHVKRLNAPDPYQLVKQVILRIYHQHKGRYGYRRIRLACRNEGILLNGKTIRKLMKELGISSLIRRKKYRAYRGEQGRTCNNLLKRQFYADRPNQKWVTDVTEFKVDGRKLYLSPIMDLYNGEIVSYNLTERPLASMVKSMLLDAVEQLNKDDKPLLHSAQGWQYQMPRWQRWLSDNGITQSMSRRGNCLDNAAMESFFSTLKSECYYLNKYNKLHHLKQDIIDYIEYYNHHRIKEKLDGMSPVQYRLKHFS
83214..83639                       PHAGE_Stx2_c_1717_NC_011357: truncated transposase; CP48_p00570; phage(gi209447151)     2.43e-14            MEQKILSSEPRRSFSNEFKLQMVKLASQPGASVARIAREHDINDNLLFKWLRLWQNEGRISRRLPVTTSSGAGVELLPVEITPDEQKEPMAALTPLLSTPSQSTVSASSCKVAFRHGNMTLENPSPELFTVLIRELTGRGR
83636..83986                       PHAGE_Stx2_c_1717_NC_011357: transposase; CP48_p00575; phage(gi209447152)            1.64e-50            MISLPSGTRIWLVAGVTDMRKSFNGLGEQVQHVLDENPFSGHLFIFRGRRGDTIKILWADADGLCLFTKRLEEGQFIWPAVRDGKVSITRSQLAMLLDKLDWRQPKTSRLNALTML
84017..85630                       PHAGE_Stx2_c_1717_NC_011357: transposase; CP48_p00580; phage(gi209447153)            0.0                 MSRKYLIRITELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEKIEEEEREIEHLRAQTEKLRRMLFGTRSEKLKREVEQAEAQLKQREQESDRYSGREDDLQVPRQLRQSRHRRPLPAHLPREIHRLEPEESCCPECGSELNYLGEVSAEQLELVSSALKVIRTVRVKKACTKCDCIVEAPAPSRPIERGIAGSGLLARVLTGKYCEHLPLYRQSEIFARQGIELSRALLSNWVDACCQLMTPLNDALYRYVMNTRKVHTDDTPVKVLAPGRKKAKTGRIWTYVRDDRNAGSSEPPAVWFAYSPDRQGKHPVQHLRPFRGILQADAFSGYDRLFSAEREGGALTEVACWAHARRKIHDVYISSKSTTAEEALKRISELYAIEDEIRGLPESERLAVRQQRSKSLLTSLHEWMVEKNGTLSKKSRLGEAFSYVLNQWDALCYYSDDGLAEADNNTAERALRAVCLGKKNYMFFGNDHGGERGALLYGLIGTCRLNGIDPEAYLRHILSVLPEWPSNRVDELLPWNVVLTNK
85631..85906                       PHAGE_Stx2_c_1717_NC_011357: putative transposase OrfB; CP48_p00585; phage(gi209447179)     1.73e-51            MSIRRSVNAYASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLGRLGHTPPAEAEKAYYASIGNNDLAA
complement(86083..86730)           hypothetical protein; CP48_p00590                                                    N/A                 MGNNMKIIQKKSFKFSQYRIQNTGGWCYGISAAIITHLRENIDGVIHPSQAYSYSEIYSKILNASYNKEMNSVTPGFYELRRSILSIQNELNNPFNTPGSYVYNFNRCGICLLLVKVDSLPHSYGEIFQGRFSFFGQSANHAGVIIWAPDEIFIFDPNCGGVLFSWTRGNHSESMPVIIDMMLEQMYCLYDRMKGARKANVVSCITLEQPYFGKV
complement(87551..87946)           PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; CP48_p00600; phage(gi557307573)      4.98e-37            MALICELDEQWSYVGSKARQHWLWYAYNTKTGGVLAYTFGPRTDQTCRELLALLTPFNIGILTSDDWGSYGRVVPKNKHLIGKIFTQRIERNNLTLRTRIKRLARKTICFSRSVEIHEKVIGAFIEKHMFY
complement(87973..88245)           PHAGE_Entero_P1_NC_005856: InsA; CP48_p00605; phage(gi46401643)                      1.22e-22            MASVNIHCPRCQSARVYRHGQNPKGRDRFRCRDCHRVFQLTYTYQARKPGMKELITEMAFNGAGVRDTARTLKIGINTVIRTLKNSRQSE
88313..88852                       PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; CP48_p00610; phage(gi100060)      1.18e-08            MPVDFLTSDQKQNYGCYAAVQLARYFHLDERDLPFINQRRGKHNRLGIALQLTTAHFLGTFLTDLTQVLPGVQHFVAVQLNIRRPEVLSRYAELDTTLREHTALIKEYYGYHEFGDFPWSFRLKRLLYTRAWLSNERPGLMFDCKRLARTVLIFTERSDQLSRATDRVPGLPASPGYAQ
complement(88773..90344)           PHAGE_Stx2_c_1717_NC_011357: transposase; CP48_p00615; phage(gi209447153)            0.0                 MDTSLAHENARLRALLQTQQDTIRQMAEYNCLLSQRVAAYASEINRLKALVAKLQRMQFGKSSEKLRAKTERQIQDAQERISALQEEMAETLGEQYDPVLPSPLRQSSARKPLPTSLPRETRVIRPEEECCPACGGELSSLGCDVSEQLELISSAFKVIETQRPKLACCRCDHIVQAQVPSKPIARSYAGAGLLAHVVTGKYADHLPLYRQSEIYRRQGVEVSRATLGRWTSAVAELLEPLYDVLRQYVLMPGKVHADDIPVPVQEPGSGKTRTARLWVYVRDDRNAGSQMPPAVWFAYSPDRKGIHPQNHLSGYSGVLQADAYGGYRVLYESGRITEAACMAHARRKIHDVHARVPTDITTEALQRIGELYVIEAEVRGCSAEQRLAARNARAAPLMQSLYDWIQTQMKTLSRHSDTAKAFAYLLKQWDSLNVYCSNGWVEIDNNIAENALRGVALGRKNWLFAGSDSGGEHAAVLYSLIGTCRLNNVEPEKWLRYVIEHIQDWPANRVRDLLPWKVDLTSL
complement(90607..91572)           PROPHAGE_Escher_CFT073: transposase; CP48_p00625; phage(gi26248352)                  1.13e-11            MSLPNPLCVGIDVSKATLDIAASTDITPFTVSNDSDGFDAIIAELREHSVALILMEATGGLEAAVACQLQAEGFDVAVINPRQARDFARAMGHLAKTDRINARVLAQMAEVINRHPDRVRFIRSLPDVERQVLVAMVIRRRQLIAMLVAERNRLHPVHPQSRKSINIIKALEDELARVDEEMNSYIRNHFKEQAARLSSIKGVGAMTVASLLAEVPELGSLSRRAISALVGVAPVNRDSGSMRGRRTIFGGRSGVRTALYMAALVATRFNPVIKAFYMRLLAAGKTQKVALVACMRKLLTILNAMIRKNEEWNESNHYIAP
91816..92118                       PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; CP48_p00630; phage(gi24373865)       1.29e-10            MKKRNFSAEFKRESAQLVVDQNYTVADAAKAMDIGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATALLMSDSLNSSR
92145..92738                       PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; CP48_p00635; phage(gi41057343)     4.14e-124           MATLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGLAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAVTGPNQVWCGDVTCIWTGKRWAYLAVVLDLFARKPVGWAMSLSPDSRLTMKALEMAWETRGKPGGVMFHSDSNNAGISFYHHSVCCLTRLV
95153..95173                       attR                                                                                 N/A                 GCTCAGTCCGGTTGGTGATTT
