gi|00000000|ref|CP012514.1|  Salmonella enterica subsp. enterica serovar Thompson strain 4701355, gc%: 52.25%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
complement(1058483..1059685)       PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; STho1986_0987; phage(gi100242)     3.53e-49            SalmonellaentericasubspentericaserovarThompsonMTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLQEDEFQWLSGLPFFKPDYLNWLREFRYNPDQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS
1059831..1059845                   attL                                                                                 N/A                 TTATAAAAATGTAGC
complement(1059880..1061172)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; STho1986_0988; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarThompsonMANASYPTGVENHGGSLRIWFLYKGKRVRENLGIPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRPGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWAPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ
complement(1061217..1061465)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; STho1986_0989; phage(gi169257269)     1.63e-55            SalmonellaentericasubspentericaserovarThompsonMSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT
complement(1061506..1061745)       PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_0990; phage(gi966201452)     2.89e-40            SalmonellaentericasubspentericaserovarThompsonMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAK
complement(1061788..1062897)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; STho1986_0991; phage(gi169257271)     0.0                 SalmonellaentericasubspentericaserovarThompsonMENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTKEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG
complement(1062908..1065823)       PHAGE_Salmon_SPN3UB_NC_019545: RecE; STho1986_0992; phage(gi423262421)               0.0                 SalmonellaentericasubspentericaserovarThompsonMSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAVNATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQRIVDGVNTETGEVLEDHNENFENKDSSPTPSPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDIHKAVNAIKNVFPVDRKIPELGTIIQFLKTWFDTEHIDRGLLVKEWAKGNRTSAIQRTESGANAGGGNKTDRHPDVKHNFDVLDIEIALATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEYYQYPGRLRGYINANLTESNHEKPTAETLAAARHTPEKDAVEEANRQLAAERGDFVPGISDPNDPKWVKTGTSQPASEPELVKNVGNGIFDVSALMQNSSTYGTKTAPEATSSVQVQEIVSDEKQAGDAMQAGENDLGNGEKADTIENQSQAETHQNNTSVSQSEPEEQQNVPDSPQEKPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHTLALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPAPVPLGASLEETGQSYMALPAEYQRIDADQKQTAAAMKACIKEYNTTLSTPVKTSGSRDALLEQLAIINPDLVTQEAQKSVPLKVSGTKADLIQAVKSVNPAAVFADELLDTWRENPEGKVLVTRQQLSTALNIQKALLGHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLEIDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKAMRAIANGFDTGEWPAPITEDYTEELNDFDVRRLEALRVQA
complement(1065946..1066233)       PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; STho1986_0993; phage(gi423262422)     4.78e-49            SalmonellaentericasubspentericaserovarThompsonMEIVKIEMNLKAVNKSIALFNCENKVSGAVHSNSTGETTVILDGGYVLGKFDCPHCAVTAISLLIVKIREGEKTGYGNYQKHKQTFMEQAFVTVH
complement(1066318..1066488)       PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; STho1986_0994; phage(gi423262423)     1.23e-20            SalmonellaentericasubspentericaserovarThompsonMHNQNTCAYHLCGKPIEQGKEVKSPLLYRKGSQLARKEKEYCSRQCAEYDQMAHES
complement(1066791..1067201)       PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; STho1986_0995; phage(gi169257276)     1.67e-93            SalmonellaentericasubspentericaserovarThompsonMNKNLHPIFAKRIQQVLDENGWSMADLSRRVMLSHTSVRKWASGMSVASGERLKRLSAVTGRPEYWFFMEPGDESEDERAEPKPRVLDEKEETLLSLFNQLPEAEKLRVILHTKAVLQEMDLLKNDVFDLINDLKK
1067321..1067560                   PHAGE_Salmon_SEN34_NC_028699: regulatory protein; STho1986_0996; phage(gi966201461)     1.95e-13            SalmonellaentericasubspentericaserovarThompsonMDNQVKIKISNHMTQMSIGEHFGISSQAVGKWLRKGVIPPRRILPLCEILEWRVTPHEIDPAAYPNPTDGLPSQETSAK
1067580..1067900                   PHAGE_Salmon_SEN34_NC_028699: putative DNA-binding protein; STho1986_0997; phage(gi966201462)     8.47e-72            SalmonellaentericasubspentericaserovarThompsonMENAIARKLDPPEINPVEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLRAERARPDALGWD
1067991..1068968                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; Lambda gpo homolog; STho1986_0998; phage(gi169257279)     0.0                 SalmonellaentericasubspentericaserovarThompsonMSNTAEIYKFPAPVPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINANLDKWAYSKPHCSKCPVSFPDAEIATWIISVHETRDSYPRKEGRASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRVSPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIPTGFRG
1068971..1069720                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; STho1986_0999; phage(gi169257280)     0.0                 SalmonellaentericasubspentericaserovarThompsonMKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWGSYRKNVSHLRIVK
1069731..1069934                   PHAGE_Salmon_SPN3UB_NC_019545: putative DNA-binding protein; STho1986_1000; phage(gi423262429)     6.01e-43            SalmonellaentericasubspentericaserovarThompsonMARPKTHSERMIILERIIGLVKEQGRITTNDVVAMFGVHRTTAEKYLQIALVRGGFIRHGRCGVFRD
1070075..1070608                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STho1986_1001; phage(gi23505476)     9.93e-55            SalmonellaentericasubspentericaserovarThompsonMSNINKQALRERYSPKPVPKCHICGEEMTIQRISASRITYGCTGATYDDIGCHYAEGRSIADDHYEQSRVTVVDVSDPDVLALLDELEHYKSREERVTKLVLDNSTSWDVLYEKLEAAEKRIAEQREYYEGVIADGSKRIAELEAREVSVSEIRKNKFIEKTEDELDGDHYTICKNG
complement(1070635..1071627)       DNA-binding protein; STho1986_1002                                                   N/A                 SalmonellaentericasubspentericaserovarThompsonMKISSSTPCLNFAPQKEYSAAVVPHPSKNAYADYVLETGKRIPFSAADLSNLYQSVIYAVHSSRSRLIDQHTANMIGNTVLDALSRSQTFRDAVIYGIHNKEVQLGCITYRNEYEINEDSPVGVDSIHLLTHSELYEYEAGQEPILPICEARKDEHEEAYISFSAAPDTDSCEMPSWQEGLIHEIIHHVTGAGDPLEDGNIEPGPTEILARRIAQELGWSIPEFTGYASPDRVAHLRTRNLNALRQTATRHEDNEEAFFERLDVISEGYEASADFTEYPVMSDMVKELNKPHDFPGLVINDNTMDADPDQIQLYHGQPYIFTFVDKHNQR
1071897..1072130                   PHAGE_Salmon_SEN34_NC_028699: DNA-damage-inducible protein I; STho1986_1003; phage(gi966201471)     3.00e-27            SalmonellaentericasubspentericaserovarThompsonMRIELVISRTKQLPEGAVPALEKELITRLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFY
1072242..1072463                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical bacteriophage protein; STho1986_1004; phage(gi169257285)     3.35e-46            SalmonellaentericasubspentericaserovarThompsonMAEGVLSDLADNLRVTITDAKGIELLSFRLASGDRYILSTQNGSVTNRKLSRDDLYWSKDTIMEVVREMGSNN
1072546..1073148                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1005; phage(gi966201473)     2.27e-145           SalmonellaentericasubspentericaserovarThompsonMAHELQLIKQSSGILIPATPETSDILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGAISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG
1073148..1073354                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1006; phage(gi966201474)     8.63e-26            SalmonellaentericasubspentericaserovarThompsonMTMKYSWFHHHDCTTEQADELVARYRARGVKTERSLNPDYTTWTVSAFLPTSSKPARPDNRWRNRVWG
1073357..1073968                   PHAGE_Salmon_SEN34_NC_028699: protein NinG; STho1986_1007; phage(gi966201475)        4.54e-144           SalmonellaentericasubspentericaserovarThompsonMAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERATWRQRKAAVKPLKHWIGLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRTTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRTALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
1073965..1074102                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1008; phage(gi966201476)     1.10e-13            SalmonellaentericasubspentericaserovarThompsonMKPELIEILRARWQRLRIYRYRGSVLVDYRILRNFVRIYHSAGAA
1074102..1074911                   PHAGE_Salmon_SEN34_NC_028699: putative antitermination protein; STho1986_1009; phage(gi966201477)     8.00e-83            SalmonellaentericasubspentericaserovarThompsonMNLESIAKYFAPKSPMYSDSSRATATDCLTGTDVMAALGLVNAKCGFGFDLYLAKIGISSPDRAMEALYDSSVEISQRFKSVKELDEKVRRRVLEIMCAFAYQDYARSAASVRRCDCCDGSGFTEVEVFTNKIQYPDGKPPKWAKVTKGVFPSYWEEWKSVRESARVLCKACNGKGVISNACRCHGKGMVLDKEKTDKQGAPVMKVCDRCTGRGYARLKFSNVLEGVRTVWDVKKTTAYDHVQPLFELLVEECHRQESYADSALKSVTK
complement(1075214..1075711)       PHAGE_Edward_GF_2_NC_026611: hypothetical protein; STho1986_1010; phage(gi764162267)     2.00e-49            SalmonellaentericasubspentericaserovarThompsonMDKFDRPRQRLFLQGLYDAYPEELTNEQLEELLSTFPDKKVTTANLLYLEKHGLIFSGLQEGAVGYHLVNRPAITHKGINFIRDDGGLGAILNVQTVKFHDSTITALEDIIRVANLPDEKKSGLISKLRELPSDAIKHLTLQLLTKGVLNLPAALPIIEKFLRPV
1076051..1076239                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STho1986_1011; phage(gi169257242)     1.79e-31            SalmonellaentericasubspentericaserovarThompsonMKEGYYWIQHNGVAQVAYYTNDTVDDLESGQLIVGVWHLTRGDDICHNGEAEVLSGPLQPPV
1076329..1076718                   PHAGE_Entero_mEp390_NC_019721: putative holin; STho1986_1012; phage(gi428782712)     3.73e-57            SalmonellaentericasubspentericaserovarThompsonMSEPVSSATVLAGGLMGASVFGLATGTDYGVVFGAFAGAVFYVATATNIGRIRLVAYFITSFIVGVLGAGLIGTKLAAITHYEKPLDALGAVIISAMCIKFLTFLNSQDLNSLFSILSRIRGGGSNGSK
1076705..1076986                   PHAGE_Entero_mEp390_NC_019721: putative holin; STho1986_1013; phage(gi428782713)     2.67e-49            SalmonellaentericasubspentericaserovarThompsonMVANDPSAVLNAVICGVIVIVLMFYRRGDATHRPLISLLAYVMVLVYASVPFRFVFGLYESSHWLVVMVNILICAAVLWARGNVARLVDALRH
1076986..1077600                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; STho1986_1014; phage(gi169257182)     2.68e-127           SalmonellaentericasubspentericaserovarThompsonMNQQQFQQAAGISAELSASWYPHITAAMSEFGITAPLDQAMFIAQTGHESAGFTVLKESFNYSVEALKKTFGKRLTPYQCEMLGRIDGRQVAHQPQIANLVYGGRMGNNSHDDGWKYRGRGLLQITGRENYAKCGAALKLDLISTPELLTQEKHAACSAAWYFTLRGCLMYSGDVVRVTQIINGGQNGIGDRRERFEKAKSVLV
1077597..1078139                   PHAGE_Salmon_SEN5_NC_028701: hypothetical protein; STho1986_1015; phage(gi966201566)     4.40e-26            SalmonellaentericasubspentericaserovarThompsonMIVLLKLLKKFWKPLAEILLVAFLLCAGAYWCYSRGYQKADTSWKFQWAQRDLTDATTVLQREVTERAKEQRRQHAADEEQKRADEELAKIQADADAAERARGGLQQQLAAVQRQLAGSETGRLSALAAASQAKAETGILLAQLLGEADDLAGKFAKEADERYVAGSTCERTWDKVTGQN
1078242..1078745                   hypothetical protein; STho1986_1016                                                  N/A                 SalmonellaentericasubspentericaserovarThompsonMRRILATAAALCLGGCITVYGPVKTGGQQQQDSQAGQQLGMSEQISTLFIGNRKPDELLNAVALYFREKAITASVNDQTTGIIAGTGDDPELSSLYLDCSLLPQTQNIQEHYRIVAQVWSAGEGSNVSVMVTGTAGLDTADGNDKVNPVECKSTGIFEKDLLEQLRK
1078806..1079435                   PHAGE_Salmon_SEN34_NC_028699: terminase small subunit; STho1986_1017; phage(gi966201418)     7.90e-150           SalmonellaentericasubspentericaserovarThompsonMAKPDWEAIETAYRAGVMSLREIASHHGISEGAIRKRAKRDDWSRDLNARIQQKADDLVRKQEVRKTVRTKTELTERVLIEATAEVIASVRMEHRGDIRRARELTNTLFDELGAQCADVGALEQLGNIMFDPDDKGRDRLNETYQKVISLPSRVKSLKDLSDSLKTLIGLEREAWSIGTASEPEKTPLPGKNTDLTTDQAAELYKKMMG
1079438..1081060                   PHAGE_Salmon_SEN34_NC_028699: terminase large subunit; STho1986_1018; phage(gi966201419)     0.0                 SalmonellaentericasubspentericaserovarThompsonMPLPFSFDFKHPDYQMVFEWRMERLQRIRQHPEMLPALKQFYRTNPAQFIIDWGMTTDPRNIDYGLPVTIPFLLFPKQEEWIHWIMERWGKRENGITEKSREMGLSWTAIGMACSLCLFNKEMVIGFGSRKEEYVDSTGDPKALFWKARKFVETLPVEFRGAWNEKKHAPYMRVEFPETGAVIKGEAGDNIGRGDRTTLYLVDEAAFLQRPLLIDAALSQTTRCRIDLSSVNGMANPFAQKRHGGKIPVFTFHWRSDPRKDDEWYRRECEKIDNPVVVAQELDLNYSASAEGVLIPSDWVQAAVDAHIRLGIQPTCKRLGAMDVADEGRDKNAFSTRHGFLLENVREWSGVGSDIYQSVEKVFGFCEQDNLEEFRFDEDGLGAGVRGDARAINELRKAARRPPILATPFRGSGAVFDPDDEAVRGDNGQAARLNKDFFANAKAQSWWYLRKLFRNTYRAVVEGMAYNPDEIISISSTMESKDKLIIELSQPTYSINGVGKIVVDKQPDGTRSPNLADSVMISYAPMNSALNIWELLGRQA
1081060..1082529                   PHAGE_Salmon_SEN34_NC_028699: putative portal protein; STho1986_1019; phage(gi966201420)     0.0                 SalmonellaentericasubspentericaserovarThompsonMARNKQASRRTVQATADGYENFVARVGMQTPNQHSASTYRANFTSRNRMLVEWSYRSSWLIGEAVDAIPDDMTRKGIRITSEIDAKDRGTLEAQLDQLQIWDALNDVLKWSRLYGGAVGFIMIEGQAPMTPLRLETIGEGKFKGILPLDRWMINPVLTRRIKEMGPNLGKPELYDVVTTATGIPAWRIHHSRLIRFDGVTLPFQQKMTENEWGMSVVERIWDRLTAFDSATVGAAQLVYKAHLRTYKVEKLRELIALGGPAFEALLKNIDLIRQFQSNEGMTLMDAKDTFETHQYSFSGLDDILSQFAEQISGAVGIPLVRLFGQSPKGFSTGDADLANYYDRVSSLQERRLRLPVRRVLDIMHRSELGKPLPDDFTFEFNPLWQMSDVDRSTVAVNTTTAIVNALDAGLMTTKAAMTDLRENSDVTGIGASITDEDIENAEDEAPPDIGELVDKPPEPTGGDPISNEPTADSAGGRGYRKWALRWFKR
1082543..1083151                   PHAGE_Salmon_SEN34_NC_028699: putative head morphogenesis protein; STho1986_1020; phage(gi966201421)     9.88e-146           SalmonellaentericasubspentericaserovarThompsonMEALERYSEIITPWATKVAENFTADIVRQNEKQWRQHSRNISAELRNMVDRAPVGQVMKSIVAEQIKYIKSLPLEAADRVYDIQNKAIEAVVTGGRAEPFAKEIAASGDVSRSRANLIARTELGRATGALDQARALSIGSNGYIWRTAEDGDVRHSHREMEGKFVEWGRPPTLDGMTGHAGELPNCRCYKEIVFPNPHSYLA
1083166..1084398                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1021; phage(gi966201422)     0.0                 SalmonellaentericasubspentericaserovarThompsonMKYFFNTRLGETRYQLADGSLLCKDVPIGRTGKQLYGAADLPNLKPDKFGEIVVTRSPEQVFHPATLASFEGMSITILHPEDENGNVRLVNPENWKELAVGHLQNVRRGTGDQSDLMLADLIVKDESAIQLIEDGLREVSCGYDAEYEQTEPGKARQVDITGNHVALVPKGRAGNRCAIGDRDTMANQKKSWWTRMRTAIKTGDSDTMNELLDSAPAAVTGDEGDLPGGVNLNINLSPQQPLPDKKPEMGGDVTGDGEDDIKTLLKALLAKLEGTATGDNADTPDDKDKKDPTGDGEDNEEETTITGDSAYRAEVIIPGIDLSRKVKPTAFKRDVLAAADKTLVRQVVGDADIRKLPKQSVDMAFNAVSEIAKGRNTRSTTGDAQRPGMGMTSIASLNKQNADFWSNRKG
1084403..1084900                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1022; phage(gi966201423)     6.89e-115           SalmonellaentericasubspentericaserovarThompsonMTAYLYRMPVGIAGAISRPQDLTVEPVILKSDNAFAAYGLAGKYDADGFFVPLAEGDTVDKVKGIYVRPYPTTSQPDMVRQVGTDKNFPGDAMKRGYMTVNVGADASSVKKGGVVYIVVSADASIPVPLGGITAAEVTGKTAALPDAFFTGAGDANGNAEISWKI
1084912..1085853                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1023; phage(gi966201424)     0.0                 SalmonellaentericasubspentericaserovarThompsonMITFDQATVDSSGAFLIGELERLDQGLNLPLVGYTWTRDIQLREDVSIADDISSWTNTSFGVAGSGANPNGKNWVGKDSTAIAGVNVDISKDGNPLNLWGMELGWTVVELAAAQQVGRPIDTQKYDGMQLKWQMDNDEQVYVGDEALGLKGLTNLVGVTLNNATKTWANSTNDEILDSVNSILSNAWAASGYSVVPSDLRIPPEQYSLLASRKVSEAGNQSLLTYLAVNTIAFHQNGVPLEIKAVKWLKGRGVGGKDRMVAYTNDKKYVRYPMVPLQSVPVQYRGLYQIATYYGKLGAVEPVYKETLSYVDGI
1085895..1086263                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1024; phage(gi966201425)     1.50e-84            SalmonellaentericasubspentericaserovarThompsonMVKEKLVTIHVHTPFTLTLGDQSKQEFGRGRHNVPEEVASHWFTRAHAELSESGSNETDDQQPVIDSLQAQIADKDKLIADLKDALLKLQEQNDSLQAQITSARTGGNGAKDAKESKPANSK
1086229..1086636                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1025; phage(gi966201426)     5.11e-96            SalmonellaentericasubspentericaserovarThompsonMPKNQSLPTVSDFRRDFPQFADPAKYPDVQIEFRLNLADELLSENVTGKKLFPYFAELFVAHYMTLWAADSRAMLVGGPGGSTNGVQSSKYVDKVSVSYDTSATLNPDAGFWNNTRYGAEFYQLITMFGAGGRQL
1086633..1087187                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1026; phage(gi966201427)     6.39e-129           SalmonellaentericasubspentericaserovarThompsonMSFKSGVTTRVDNAQAILDALKSLTKKDVLVGIPAEDSDRDDVSFGNAGIGYINEYGSPAQNIPPRPHLVPGVKSVEDQTMPQLKAAAQAALDGHAAGVERALNRAGTVAARGVKNHIKAANFTPLADSTVEARARRGRKGAKAELARRAAGESPGTTLAKPLYDTGKYLASITHVVRDKDADS
1087174..1087563                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1027; phage(gi966201428)     1.94e-88            SalmonellaentericasubspentericaserovarThompsonMPTLDVTDVLFDPDFCNFNLWVTRRVQTVDENGIGSDSEVKTQFAGVVTVDRSLENRRMQSGQVISGAILIVTTERLTQGQTGRDADIVTYQNRDYRVTFVDPYTAYGAGFVQAHCELLPFDGGTPVEQ
1087538..1088104                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1028; phage(gi966201429)     3.66e-133           SalmonellaentericasubspentericaserovarThompsonMGVLPLSNNTSTARGWLTPTSGDPDYDEALDRLLSQWMRNVSGLPAGMVRPRWQKDQPPLLPVETNWCAFGIIEWPIDDNPAFIRQTDSGTELWRHETFVAMASFYGPSGMKFASIFRDGISVEQNNSELNRMGLTLGDVSSITPFPELINQQWLRRYDITVKIRRKVTRTYNIKSIVDGNVAISTGD
1088107..1089258                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1029; phage(gi966201430)     0.0                 SalmonellaentericasubspentericaserovarThompsonMAKGLPLNRVTNVTVTLSARAAQGRNFGSMLILGNSTVIPITERLRLYSDPADIGDDFGVDSEEYKAAVVWFSQSPRPTQLYVGRWIDSLTSAESGPTETLLQAVNALLDYNSWYGLHLAVPVADYPDDADLISVSSAIESATVSRILAITSSEADILSSAVETDLATKLKAAKYSRTYIQYSSTSPYAALSAFGRAFTVNFTGSNTTITLKFKQLPGITYETIGTSQANALEAKNCNVYVYYENDTAILEQGVMCNGDFFDERHGLDWLQNAVQTADYNTLYTSTTKIPQTDAGTTTRIANIEKVLDVADKSGLFAPGIWTGGPMGQLGTGDTLTKGYYTWADTVDNQLQTDREARKGVPIQVAAKLAGAVHYGDVAITVVR
1089269..1089709                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1030; phage(gi966201431)     2.94e-104           SalmonellaentericasubspentericaserovarThompsonMGAYSFLDISASLSGPTGSLDLGAGSANSEEGITVTMTEAKNTMTIGSDGEVMHSLHGGNSGVITVTLLKTSPLNKKLSIMYNAQRMSSALWGNNVIVVRNRVSGDIGTARSCAFQKQPDWNNPKVAGTVAWVFDCGKIDEVLGEF
1089713..1090165                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1031; phage(gi966201432)     3.48e-106           SalmonellaentericasubspentericaserovarThompsonMECNINGVEYRAAKLNVFDQLKVTRKLLPLLAGMMTDFGSIRSLLPADGKVDSKKFDELKPVFETLLPRIADELASMKEEDTNSIIHPCLSVVARKNGTVWTPVFNSGELMFNDINLLIMLQLVARVVADSLGNFLPVSLTSETPDQTQG
1090343..1092352                   PHAGE_Salmon_SEN34_NC_028699: tail tape measure protein; STho1986_1032; phage(gi966201433)     0.0                 SalmonellaentericasubspentericaserovarThompsonMNAETIKDFLVSLGFGIDEAGYEKFESVLAGVTANAIKTGLAVEGAALSVVAFTAKIASGLDNLYWASQRTGATVQGIQSIGYAVSQVGGSVDAARSSLESLSRFVRNNPGAEGFLNRLGVQTRDASGNMRDMAAIFTGVGQKLSSMPYYRANQYAQMLGIDENTLMAMRRGLGGFSGQYSAMAKAIGFNADEAAKSSNRFMTSLREFGAMAGLARDKIGSNLAGGLAGSLDTLRRHILDNFPRIEQTLTKAIKGILTLGDIIGRLFFRLIEGTSSLITWWQSLDKQTRELISLFGALTIALRILNSTFWMSPIGLITALAAGIALLWEDYQTWKEGGQSLIDWEKWKPEVDVALKMVRDLKATVNDLAKALAKLLNIDPKSWSLKWDFSNFIDQMGEFSKMLNMIADLLNAIKDGRWADAASIGKQMLNQGSENSSAMPMVTDSANGAADWIKEHWGFDPRSVGRTVRGWFGSDDPEQHGQSVKRPQPTKAGAELLGWMQPMLTNLEHLYRLPEGLLRSVAITESGGNQFAVSGAGAKGLFQFMDGTARDMGLRGNDVFDPEKAAQAAAKYLSQLLRANGGDLSKALASYNWGIGNVQKHGMALMPRETRNYIPKVLSNMPAPGAQVQQQNTYHIYGGGDPHSVGNQVERRQQSANAQLMRGNQTKVG
1092352..1092927                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1033; phage(gi966201434)     3.55e-136           SalmonellaentericasubspentericaserovarThompsonMDILSTLFHQQSRRIGVLIPSVVVSEKHTDTLEITEHPVEVGAAIADHAYKKPSEVVMEVGFAGGGSLLDFASNLTATSLLGLSPQQTYQEILDLQESRIPFDVVTGKRLYSNMLIRALEVTTDRTTENVLSAVLTLREVLISQTQQVTVADKTDMKDGASTSPVLNTGTKTTKPPNTSLLQSGAAFLGLG
1092927..1093229                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1034; phage(gi966201435)     2.43e-68            SalmonellaentericasubspentericaserovarThompsonMTIQEIPLTADNQQFSIILAGITWRIRIIWRDLYWIMDLQNDRGEPVISGIPLVTGADLLAQYAYMGLGFKLVVMCDDSTQDYPTKTDLGGRSHLLVLTE
1093232..1094305                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1035; phage(gi966201436)     0.0                 SalmonellaentericasubspentericaserovarThompsonMSQNWMRHFELQLVGENGQGIQLSDFKVTFTIDWFNISSASRVGTFKIYNLSADTVNRITGQEFSKVRLIAGYDGIAPEVAASDVGIAREVDADTVGQSDGRNYGLIFSGEIRYSVTGKDSPIDSYVLIQAADTDLAFATSITNQTLAAGYTTEDMFRLLMKDFEAKGATVGRTPVFPPTVFPRGRVLFGMTRHLMDNVAAQCGATWQFVDGQLNMLPEGEYMHDAIVLNSATGLIGMPQQTIGNGVNVRALINPNIRVNGLIQLDQASIYKTVLPNNDIAKAAGRYFDETIDGNSNVTLPVSKQMTASIATDGVYIVRGIMYTGDTRGQAWYMDMMCEARGAADLFSSSAQQRIYS
1094302..1094652                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1036; phage(gi966201437)     3.09e-30            SalmonellaentericasubspentericaserovarThompsonMKRMKLVLTVSLMFSCSAAFADLQCGGYRLHAADNGWTKINGEQVTSQKIKFLGKKDDWDNVKTDMGLMPARDGNNYGFEFVKRGGKSFLNVQLLQNSMDAPKIIGSYPCSQIKDK
1095461..1096216                   PHAGE_Salmon_SEN34_NC_028699: baseplate assembly protein; STho1986_1038; phage(gi966201439)     4.54e-173           SalmonellaentericasubspentericaserovarThompsonMAVSDQARSGDLAETFKSERETTKNQIRVALPGIVQSFDPDAVTAVVQPAIRSVEIDNDGNRVTKPYPLLVDVPVVFPRGGGCTLTFPVKAGDECLVIFADRCIDFWWQNGGVQEPVDDRVHDLSDAFCIVGPQSQAQKISGISTSAAQLRTDDGAAFVEVAAGHNVTVKTPGMLTANAEGGTTITSPTITLNGDVTINGNLSQGMGEGGGSATMLGPVTVANDVTAGGKSLMTHTHGGVQTGGGNTGEPN
1096216..1096569                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1039; phage(gi966201441)     2.74e-78            SalmonellaentericasubspentericaserovarThompsonMRYRREDAEGDYTFGCGDDTWLINSPEAVAQAVKTRFALWYGQWFLDKTEGTPWIQSVLGKQKPETYNLAIRKRILETRGVKSILSFNTTVNTTTRRVQFFAEIDTIYGTTTVTSEA
1096570..1097769                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1040; phage(gi966201442)     0.0                 SalmonellaentericasubspentericaserovarThompsonMALNLDTLGLSATVTAEGISAPDYQTIFDTLTSYFQQIYGSDAYLEPDSKDGQMVALVALAVHDANNTAISVYNCFSPATGYGAALTSNVKINGIARKGATNSTVDLLLTGTAGTAITNGTVKDTNNVIWRLPASVVIGVDGAVTVTAICSNSGAVAALAGTITTINTPTRGWTSVTNPAAATVGAPAETDAELRIRQGQSVAIPSITPFEGVDGAIANIAGVTRHKLYENDTGKTDGNGLPPHSISAIVDGGDVTEIARTIRGNKGQGVRTWGKTSVTVPDKYGNPHIISFSRPTDVPVYGKITLTVFAGYTSQIGVQIQQAVADYINRLMIGDPVLLSRIYSPANLGVVSGGNARYYDIQELLIGKSPETVAAANINIAYDESASCKPENIIITVAA
1097766..1098446                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_1041; phage(gi966201443)     1.54e-159           SalmonellaentericasubspentericaserovarThompsonMSKYTDLITNYHATKPKFVEHIDLVTRPLAETSAAMKGLINAFDIDHAAGVQLDILGQWIGLSRVVSQPISGVYFSWDTDGLGYDQGVWQGPYDPDSGYTSLSDETYRIVLKTKTAINNWDGRNDSLPPILDAALDGSGLKMQIVDNQDMTIGIWVFPETDISSVSLELIAAIRQGYLTVKAAGVWGGSIEIPSVETPSEGNRFFGFDMDNEYISGFDAGSWGTLL
1098446..1099960                   PHAGE_Salmon_SEN34_NC_028699: tail fiber protein; STho1986_1042; phage(gi966201444)     7.58e-88            SalmonellaentericasubspentericaserovarThompsonMAKNDFKPFATGKGANVTSQSDWEALPALLSGFTAGKASSAQVNKALRQASFIAAALAQYTASKSGQDVLDDGDLSGFIAKMSAAFGKDFQTLDATLTALAGLATGADKLPYFTGNDIAGQTDLTSVGRDIIGKASIADILTYLGLGETINLAKNAVPATRRVNNKPLSGDINLWASDVKAISADAVGEITDNGTMASANIPGWWRVSVSNSDSVADFPTYPDGSKLYSYGYMFVEKIGEVWFQHYYAHMGANAKRQDWGTEPNTSRPWIIDYNTANKPSAGDVGALPITGGRLNGPLGIGTDNALGGNSIVFGDNDTGIKQNGDGILDFYANSQLVARIQPGSLFVINTVQTGDGKKLSLTSTNNSALNAGFNLWGDGGNRPTVIELGDDQGWHLYSQRNTDGSIQFVVNGQVIPDNYGNFDARYLSSGNVYTKGESDNRYVQNIQRGAPVWPGKVDEYGPNEAPAGCFLTQARHDPTTAYGVTFAYRPLQMWVGNGWRTING
1099975..1100493                   PROPHAGE_Escher_Sakai: putative tail fiber assembly protein; STho1986_1043; phage(gi15834244)     1.65e-60            SalmonellaentericasubspentericaserovarThompsonMELKNVTRYIPDDPDYDNNFLYFRSEDGQDFYESLNKFTKRYKLCIDSEGVIRSVSEDVSRLYPAGFSVVEVNKLPAGFNIYGDWKYSNGAVVAVPVDYQDKAEVTRQKLLNDANITIADWRTELALDEISDDDKATLTKWMAYIKGLKSLDLTGISDEATFNKIQWPALPQ
1103986..1104000                   attR                                                                                 N/A                 TTATAAAAATGTAGC

#### region 2 ####
1916041..1916409                   PHAGE_Entero_HK022_NC_002166: integrase; STho1986_1861; phage(gi9634144)             8.43e-24            SalmonellaentericasubspentericaserovarThompsonMKIALPLSLNLPSMDLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPDSLTKKFVAARKLTGINFSENPPPFHEIRSLSGRLYKDAYGEGFAQKLLGHTSENTTKIYLDGRDEKAYMML
1916466..1916482                   attL                                                                                 N/A                 GAATACAGAAATTCGGA
complement(1916675..1916875)       hypothetical protein; STho1986_1862                                                  N/A                 SalmonellaentericasubspentericaserovarThompsonMLSPRYTTRYEDLLQVKWQVYPDFHIPDVMEPQPHRMQERAAASWRSFDSASIEWLPVAADFTCSG
1917493..1918407                   multidrug DMT transporter permease; STho1986_1863                                    N/A                 SalmonellaentericasubspentericaserovarThompsonMRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNIPVTSRCRDNSSQK
1918546..1918698                   hypothetical protein; STho1986_1864                                                  N/A                 SalmonellaentericasubspentericaserovarThompsonMFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF
1918708..1919322                   disulfide bond formation protein; STho1986_1865                                      N/A                 SalmonellaentericasubspentericaserovarThompsonMKTHHHPTTLVHLINQVGLLGICVALVVAFYYQLVRHELPCPICLLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRTVLRL
complement(1920470..1920595)       arsenic transporter; STho1986_1866                                                   N/A                 SalmonellaentericasubspentericaserovarThompsonMFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
1921163..1921363                   PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; STho1986_1867; phage(gi169257211)     4.69e-41            SalmonellaentericasubspentericaserovarThompsonMKHVKSVFLAMVLILPSSLYPALTIAADSQDHKKEETIKPMPQKWCNLWPADIPFPEDWFKMCRGY
complement(1921460..1922341)       PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail assembly protein; STho1986_1868; phage(gi169257205)     5.28e-89            SalmonellaentericasubspentericaserovarThompsonMYIGPHGHVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAETQTWSLQEDHRGETVYDTTTGNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQIASEKIAPLQDGVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
1922811..1923002                   hypothetical protein; STho1986_1870                                                  N/A                 SalmonellaentericasubspentericaserovarThompsonMTNKKHTNHHLLKINDIKTESYNMMMMHEKSKMRQIPRRCRPVADRPAGSTFLKYEQLSTTTT
1923067..1923234                   lytic enzyme; STho1986_1871                                                          N/A                 SalmonellaentericasubspentericaserovarThompsonMKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(1923491..1924024)       PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; STho1986_1872; phage(gi16765210)     1.15e-123           SalmonellaentericasubspentericaserovarThompsonMNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(1924078..1924308)       PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; STho1986_1873; phage(gi169257182)     5.24e-38            SalmonellaentericasubspentericaserovarThompsonMNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
1925442..1926521                   PHAGE_Entero_HK022_NC_002166: integrase; STho1986_1875; phage(gi9634144)             6.32e-93            SalmonellaentericasubspentericaserovarThompsonMSRKKYDANLPRYLTYRKASKSFFWRNPVTDKEFPLGQIARRDAITQAIEANNFIAQNHTPVALIEKLKGTDSFTVSAWIDRYEVLLQRRSLSVNTYKIRSNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKKTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRTAAEHLPVWFPLAMDLALVTGQRREDIVNMKFSDVVDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSANTTKLYLDERDDKAYMML
1926588..1926604                   attR                                                                                 N/A                 GAATACAGAAATTCGGA
complement(1926727..1926843)       cytoplasmic protein; STho1986_1876                                                   N/A                 SalmonellaentericasubspentericaserovarThompsonMTDKTPGFFNHLRRKLENLASSSILKGQGDLACINANF
complement(1926904..1927257)       PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; STho1986_1877; phage(gi971764937)     1.03e-11            SalmonellaentericasubspentericaserovarThompsonMKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAQKLCDPYNS
complement(1927274..1928146)       hypothetical protein; STho1986_1878                                                  N/A                 SalmonellaentericasubspentericaserovarThompsonMLTFVWITLRFIHFASLMLVYGCALYGAWLAPASIRRLMTRRFLHLQRHAAAWSVISAAFMLAIQGGLMGGGWPDVFSVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMCMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
complement(1928150..1928524)       hypothetical protein; STho1986_1879                                                  N/A                 SalmonellaentericasubspentericaserovarThompsonMASSARSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
1928662..1928892                   PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; STho1986_1880; phage(gi422936677)     8.51e-23            SalmonellaentericasubspentericaserovarThompsonMKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
1929000..1929656                   carbon-nitrogen hydrolase; STho1986_1881                                             N/A                 SalmonellaentericasubspentericaserovarThompsonMSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKPLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWDESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
1929680..1930378                   PHAGE_Pseudo_H101_NC_029094: exodeoxyribonuclease X; STho1986_1882; phage(gi985760125)     8.55e-19            SalmonellaentericasubspentericaserovarThompsonMLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ

#### region 3 ####
complement(4263597..4264325)       PHAGE_Escher_RCS47_NC_042128: baseplate hub subunit; STho1986_4098; phage(gi100101)     1.04e-38            SalmonellaentericasubspentericaserovarThompsonMIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDALKIKGVNTAPLLYDWPGWWAKLELFNPLHPVLGNEDILYIDIDSVIVGDITPLTTVKKITLLNDFSQHGASVAPATGIMFIPAPAKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAERWQNILPGRIISYKANIATPKMIGFNPELYDGTGNGKLPDGASIVCFHGSPRPWNTALPWVPYFSLKNTIQSKVKQYKLSLR
complement(4264639..4264872)       inner membrane protein; STho1986_4099                                                N/A                 SalmonellaentericasubspentericaserovarThompsonMEEEKIKLLHYLLFSISKKGNGLREYWRHEIIRSNEFLLYRLLMQANNNRRRNFLFWWRLANEMYIYGSKKQKKTGL
complement(4265064..4265519)       PHAGE_Haemop_SuMu_NC_019455: enoyl-CoA hydratase/carnithine racemase-like protein; STho1986_4100; phage(gi418489075)     3.39e-27            SalmonellaentericasubspentericaserovarThompsonMSQTTVWLACYKGRSEYRGIARFVDWLTRKVTRGIYSHCELAVAHGGNEYLCYSASFRDRGVRGKIIPLPDDKWDKLPLKATLPEVEAFFRKHNGKRYDWQGALGIALYNRERKDKLFCSEFCAEFLGLNDSWRYSPSHLYALVSSWQYDC
complement(4265516..4266121)       cytoplasmic protein; STho1986_4101                                                   N/A                 SalmonellaentericasubspentericaserovarThompsonMTKYVYYHPSTFEVIDWIDDTSLNVVLPESIKPVNDEQWKLRGKPCWICLAPFSFITTPPPGEFYQLVGDKWIYNPTAFNDALVNKKENVVLSIKAHRDTVTADYIVIDGNHFHSDANSRIQQMSLTRMGQAKQIPAGLMWQTKNNGLIELTNDIAAQFETVTMDHDMRLFANAQRHIAAVEALGDIEAVLDYDYSSGWQP
complement(4266126..4267895)       PHAGE_Entero_P88_NC_026014: tail fiber protein; STho1986_4102; phage(gi744692739)     1.79e-86            SalmonellaentericasubspentericaserovarThompsonMYNEFYTLLTDWGMAKIASALADKKQIHLQKMAVGDGGGQYYEPTASQTNLRHEVWRGEMNTLTVAPNNPNWLIAELVLPEDVGGWYVREVGVFDDEGELIAIGKFPESYKPLLPGGCGKQVCIRLIMEVSNTTAVTLTVDPSIVLATRDYVDTRLDEHEHSTNHPDATLTQKGFTQLSNATDSDDETKAATPKAVKAAMAEARNHTHTWNQITGVPDGTLTQKGIVQLSSATDSTSTTEAATPSAVKAAMDKANAAAPANHTHVWNQITGVPDGTLTQKGIVKLNSATDSTSTTEAATPSAVKAAMDKASAAAPASHTHAWGQITGTPDGTLTQKGIVKLNNATDSTSTTEAATPSAVKAAMDKANAALNLANTAASNGPRYQFFTANGTFTVPDGVTQVFVEMLGGGGGGGGGGCSPAPDKTNTFSAGRGGDHGELKIAIIGVTSKKTYTVSVGAGGSGGGGGFVPSYEDRTSIGPNGQGHTLFKGDAGEPGLDGGDSSFINISAKGGLGSSGKIAEFTSTESYPGGVGVGSAFGTGGSAAAFANGGNADGYGAGGGGGASLNQNTRSAISGYSGGRGSDGFVKISW
complement(4267898..4268530)       PHAGE_Burkho_BcepMu_NC_005882: gp51; STho1986_4103; phage(gi48696961)                2.19e-31            SalmonellaentericasubspentericaserovarThompsonMDKLLLPPPLASDERFSILANIAAERFAQIDLTALLVYLVDIVDASALPSLAGQFHVQGLEGWLFAANEQEKRELIKQAIELHKYKGTPWAVRRVLEILSLPGTISEWFEYGGKAYFFKVEIKLINQGMDENLFNNLVDLIHEYKNVRSKLEALIVWIINQSAIPVIGSALYGGEITTVLPFQVLEVQQTKPIYFGTGQWSLEITSIYPE
complement(4268523..4269638)       PHAGE_Burkho_BcepMu_NC_005882: gp50; STho1986_4104; phage(gi48696960)                1.06e-131           SalmonellaentericasubspentericaserovarThompsonMAIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQNLVAYSRAPMLDYLGELVGVHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSVMFATDEDVLLPAGSLSVAVTATCVATGESGNNWQPAQISALVDRVGNYDLSVTNLTASSGGCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVELYPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVPYQIRARLTLFTTADQETTLAAAREAINTWTRSRQTRLGQDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTAIDVTIAGVSDG
complement(4269629..4269988)       PHAGE_Burkho_BcepMu_NC_005882: gp49; STho1986_4105; phage(gi48696959)                3.63e-43            SalmonellaentericasubspentericaserovarThompsonMNTKTRPSTLHWQPALQRPEEYVCGLDDIHQAIHIILRTPRGSDPHRPLFGSNLWRYIDYPIERAIPHVVRESVEAIRMWEPRCRLLKVTPTIDGEHLTLRVQWRAADGVINSTEVLWR
complement(4270152..4271699)       PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; STho1986_4106; phage(gi221328637)     7.59e-62            SalmonellaentericasubspentericaserovarThompsonMNTMLKILPKTAMILLAFLAIFLIEWYTPIHSDDYRYYLLGISPESHFHHYMTWSGRIIADYTSALILYTRSQLVYSISAAVSTLVFCYFIVKTPSGTLRWNKSDYLLFPLIFFTYWISNPNLGQTTFWIVGAANYLWTNLFVVAWLFFFYTITIKNSKAISPWVALLSFMAGCSNESVSPFVSLISVLAIAYELWQNKSVSRNKIVYSLCAIAGSCVLILSPGNFIRASGKEFWYGRPIFERIFIHLTERVHNHLALIWIAYVVLLLLVLLVIFNKQIRAKIDKTSLICAALVVCIGIGTSLIMFASPSYPDRVMNGTFMFFLLAISFIAYALLKSGVKAGVVGVTAVTVLCGIVFLWSYSLMLNGYKKTAGQEIVRQKIITKEIAAGKQKFIIPDYYFVKLQNSGGHFGLFHDPAVYGEYYHVQAIFKKKVNFDYSVIANGAKHSLSNETTAYSNTRGDFAIISREQLTGSITLSVNGRQKTIPVEKMKHAEINDEFWYYASVDKGEITAISF
complement(4271699..4272628)       PHAGE_Entero_SfV_NC_003444: bactoprenol glucosyltransferase; STho1986_4107; phage(gi19549012)     0.0                 SalmonellaentericasubspentericaserovarThompsonMKISLVVPVFNEEDAIPIFYKTVREYSSLKPYDVEIIFVNDGSHDATESIISALAVADPLVVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKRIDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGILSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWTYIGVSVSALSLIYAMWMIIDKLMWGNPVPGYPSLMTAILFLGGIQLIGIGIMGEYIGRVYTEVKQRPRYIVKNKKTMME
complement(4272625..4272987)       PHAGE_Entero_SfV_NC_003444: putative flippase; STho1986_4108; phage(gi19549013)      5.19e-60            SalmonellaentericasubspentericaserovarThompsonMIKLFIKYVSIGVLNTALHWAIFALCVYGFQTSQALANVTGFAVAVSFSFFANARFTFGASVSTGRYLLYVGFMGVLSAVVGWTGDKCAMPPIFTLIVFSAISLICGFLYSRFIVFRNEK
complement(4273315..4274037)       PHAGE_Burkho_BcepMu_NC_005882: gp48; STho1986_4109; phage(gi48696958)                2.39e-39            SalmonellaentericasubspentericaserovarThompsonMKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEVLLDDNGEDGVVLGAVYSSVDTAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVIEVKERTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVDVNVEASHTGIKALNVTVDAPLSTFTGDVTVMKKLTWLGGMAGSGGIGNSAVITGNVNVLGNVNASGTLMDNGGNSNHHSH
complement(4274047..4275090)       PHAGE_Burkho_BcepMu_NC_005882: tail protein; STho1986_4110; phage(gi48696957)        4.99e-102           SalmonellaentericasubspentericaserovarThompsonMAEITVSGGVFATLTPIFTLWYGHKEITYDIAPYVTSISYSDSIKNESDVIAIALEDSAGRWVNEWYPGKGDTLALRLGYQGEDLLDCGIYIIDKIDISAPPSTVNIDGIATSVSKALRTKNSQGFEETTLSAIASRIAQKHGLTLAGKIAPLTIDRVTQYAETDVAFLKRLASEYGYTVKVTATELIFSHLPTLRCLAPVKTLRRTDISHYTFKDTINRIYKNATVQHQNSKQKELVIYTHDSQEKAPARGSATSADTLKINSRAPDTGAAQAKANAALDSHNEYQQTGTLSMMGCPQLTAGNKIELSDFGVLSGQWLIDKSMHKLTRSGGYTTEIDISRGPATSQ
complement(4275078..4275287)       PHAGE_Burkho_BcepMu_NC_005882: gp46; STho1986_4111; phage(gi48696956)                1.76e-22            SalmonellaentericasubspentericaserovarThompsonMRYLEHVTTDGERWDNLAWRYYGDALAYERIIAANPHVAIMPVLPSGVRLIIPVISVTQTTPKLPPWLR
complement(4275287..4276240)       PHAGE_Burkho_BcepMu_NC_005882: gp45; STho1986_4112; phage(gi48696955)                2.35e-50            SalmonellaentericasubspentericaserovarThompsonMYAVLGEIEFDVVAYWDEFESTMGVDYTSHARIEGKPGVQFIGDKLDKITLKFNFHSQYCQPTTELNRLREAMTAHQAMALVFGNGDYRGWFVITDLTATHQHTDPYGNVIAQGGSLSLQEYTGDPKSPLLPPAITTQEPNIDEMLDELPDVSDSWFDELMSAVEEGMREAKEMMDEVADAIDDIKKTIAQAKELVKEAKALKEKCGDIVDSLKKTISAIDALFQQPLDLQTLAGLPKALAAKMQELIDSLPGIRECAGDAGTLIEHAESLFDAITSSVAEATYDSAATLVNQARGTLQTSAPDVSQLAAADITRSL
complement(4276240..4278594)       PHAGE_Burkho_BcepMu_NC_005882: gp44; STho1986_4113; phage(gi48696954)                2.85e-58            SalmonellaentericasubspentericaserovarThompsonMANDIITQLQARNETLTQAIARYGSLNASTLHTLSFEQTKITRLTQQLANSALRREENDKQRAGLLEKTQTFAGQLGKLLNVETPDWKLPYEFQGNMVDMAAKGGMDNTARDALSLNIRDWSLDFNQDQKDLQSAAATMIEGGVSALQDLSRYMPDIAKAATASRDSAQSWAQAALATRDKLNIAPDDFRFAQNMLYSVAKSGGGSVAEQTQWINAFAGKTGAQGKEGIAELTATMQVAMKNAPDAGAAAANFDHFLKSTFSKETDSWFARQGVDLQGSLLEHQQNGIGVTEAMAHIVQMQLEKMNPQILDTFRQTMKIEDLSARGDALQAMTEKFNLGAMFGDAQTRDFLAPMLANMVEYRQLKASAMQAAGQHFIDDDFAVKMTSPGEQTKALQLSLNDLWLTVGMELMPAIGELAQSITPLVRQFSAWLRENPALVQGVAKVVGVIWLFNGALNILRLGANLIASPFIRLIDIFLKVKAGLALGGGSRALSVLKSFGNGAKGLTVLLGNGLIKGLRLVGQAFIWLGRALLMNPVGLTITAIAGAAYLLYRYWEPISGFFAGVWERIKTAFDGGIAGVTRLILDWSPLGLFYRAFASVLDWFGIELPASFSEFGGNILDSLINGILNALPFLNGAIEKIKALIPDWAKSALGISTEMPSVAAAVPGIAGTMVAQQASAPLASGAKAVTTSAKTIASPQPMKTKSAATPPTPAALPGKSGGKPYTLPSRAQSNVQVHFSPQVTVQGSGANAAKDINNVLSLSKRELERMINDVMAQQRRREYA
complement(4278779..4279096)       PHAGE_Burkho_BcepMu_NC_005882: gp41; STho1986_4114; phage(gi48696951)                4.89e-10            SalmonellaentericasubspentericaserovarThompsonMNEKYTLQFPFTSAAGERIDVLQLRRLKVKDMRAARRASDKPEEWDEPLMAAMTGLVTEDLAEMDLLDYQALQKRFQAMLSMATEPTATVAGNGAAGEVVSFSAQ
complement(4279148..4279672)       PHAGE_Burkho_BcepMu_NC_005882: gp40; STho1986_4115; phage(gi48696950)                6.46e-90            SalmonellaentericasubspentericaserovarThompsonMAGKIQINRITNANIYLDGNNLLGRASEIKLPDISMIMQEHKALGMVGKIELPAGFDKLEGEIKWNSFYHDVMRKTANPWQAVALQCRSSIDCYNSQGKADQLALVTHMTVMFKKNPLGTFKQNENPEFSSAFGCTYIKQVVDGETLLELDYLANIFRVNGADQLNAYRNNIGG
complement(4279672..4281099)       PHAGE_Burkho_BcepMu_NC_005882: major tail sheath protein; STho1986_4116; phage(gi48696949)     0.0                 SalmonellaentericasubspentericaserovarThompsonMAANYLHGVETIEIETGPRPVKAVKSAVIGLIGTAPCGPVNQPTLCLSESDAAQFGPGLANFTIPQALKAIYDHGAGTVVVINVLNPAVHKSTIPSETVKVDDNGQIQLKHGAVQTMNIGRSTNAGNAYIKGTDYTIDMLTGKITCMGTNLKPGVQAYVNYTYADPTKVTAADIVGAVNTAGDRTGMKLLQDTWNQFGFYAKILIAPVFCTQNSVAVKLIAQAEALGAITYIDAPIGTTFQQVLAGRGPQGAINFNTSSDRARLCYPHVKVYDSATNSEVLEPLSSRAAGLRAKVDLEKGFWWSNSNQEIQGITGVERSLSAMIDDPQTEVNQLNENGITTIFNSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESIRYFSQQYMDMPINQALIDALTESVNTWGRKLIADGALLGFECWYDPARNEQTELAAGHLLLSYKFTPPPPLERLTFETEITSEYLVSLESNR
complement(4281089..4281286)       PHAGE_Burkho_BcepMu_NC_005882: gp38; STho1986_4117; phage(gi48696948)                2.55e-11            SalmonellaentericasubspentericaserovarThompsonMKYIYSGPASGVTLADGQEVLLWPNSEISLPEDNEWVITMIARRHLVPVVTQEVETNEEEIVHGS
complement(4281283..4281738)       PHAGE_Burkho_BcepMu_NC_005882: gp37; STho1986_4118; phage(gi48696947)                3.09e-15            SalmonellaentericasubspentericaserovarThompsonMETLSVIHTVANRLRELNPDMDIHISSTDAKVYIPTGQQVTVLIHYCGSVFAEPENTDATVQKQLIRISATVIVPQISDAINALDRLRRSLGGIELPDCDRPLWLESEKYIGDAANFCRYALDMTASTLFIAEQESKDSPLLTIVNYEEIQ
complement(4281899..4282213)       PHAGE_Burkho_BcepMu_NC_005882: gp25; STho1986_4119; phage(gi48696935)                1.74e-28            SalmonellaentericasubspentericaserovarThompsonMKLSIDFWEVISLLLSFVGLMFAAGKLLLAQIEKRLNERFEALEVARRESEAGWSRLEREFLEFRADLPLHYVRRDDYLRGQAVLEAKLDALYSKIELIQRGNL
complement(4282226..4282831)       PHAGE_Pseudo_B3_NC_006548: endolysin; STho1986_4120; phage(gi56692593)               4.53e-72            SalmonellaentericasubspentericaserovarThompsonMRYQYVCLVCAMTFLSADAAEPPRASLPWRNELIRTAREIWGLNAPVADFAGQLHQESGWAPDARSPAGAQGMAQFMPATAKWVSQLYPELRENKPFNPSWAIRALVQYDHQLWKSLPAKDNCQRMAFTLSAYNGGQGWVNRDKKLAAAKGLDASIWFEHVERVNAGRSAANWRENRHYPEAILYQHASRYLQWGQASCLY
complement(4282834..4283121)       PHAGE_Burkho_BcepMu_NC_005882: gp21; STho1986_4121; phage(gi48696931)                4.03e-14            SalmonellaentericasubspentericaserovarThompsonMRKIIVPRLSGWLIASVVLFALIGWTSSAQIPVVIYKLSLVSLSAVLGYWLDRSLFPWARPDSFCPWEESLCCAAAMIRRAIIVAAICLAVALGL
4283698..4284045                   PHAGE_Burkho_BcepMu_NC_005882: gp01; STho1986_4122; phage(gi48696911)                2.55e-30            SalmonellaentericasubspentericaserovarThompsonMIQKSKEMVRLPEIINDLAFHASQVLIESMNIDSASAENAGQAIADRMMRNWGGQSIYFPKGISGRASERDYQIYSECDGRNYAELAKKYNLTLQWIYKIVKRVHTEKQHQRRML
