gi|00000000|ref|NC_000000|  Lactobacillus plantarum strain HFC8 plasmid pMK04, complete [asmbl_id: NC_000000].46011, gc%: 39.95%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
225..236                           attL                                                                                 N/A                 GATTGCTTTGGG
complement(1358..2077)             PHAGE_Ralsto_RSA1_NC_009382: transposase IRSO15-like; AN634_14870; phage(gi145708108)     4.27e-07            MSFICIDADTHKSVKVLSDRLNRTIKQFFLSQYSTAERAAVQRVIMDMNASYQAFVHELFPNAELIIDRFHIIQLMGRTMDTIRTQCLKQLDKHSREYKVLKSLWRLFHKANPDAQKSRYLFGLNEYSTEQNAIDIGTDTFPAFKTAYETYIDLHDALMGRHADELKNIITNYQPNGTPLDTAMHTLRKNLNGVINAAKSSYSNGPIEGINRKVKELKRACYGFSNQANMFTRVYQLIA
complement(2699..3007)             PROPHAGE_Shewan_MR-1: ISSod6, transposase; AN634_14880; phage(gi24374783)            7.99e-06            MENYPSNITRQQFELIRPALENFRKRTKPRKYDLYEVFCAVLYVLKTGCQWRQVPGDFPEWRSVYNYYKIWSTKAEPTADSLLEQVLKKLSLLGELTKDVQL
3406..4068                         polar amino acid ABC transporter permease; AN634_14885                               N/A                 MSSWAVIQQSLPMFEKGFQLTLWLSFVGIIGSIIVGIIVSLLQYFKVPVLHQVASIYVEVSRNTPLLIQLFFLYYAFPVIGIKFGAELCGIIGLIFLGGSYMAEGFTGGFNGVSKGQLESGKAIGLSRWQLARYIVFPQGFSLSVPAMAANVIFLIKETSIFTVIAIPELTNTALDLIGMYYRSNEYLLVLVVGYAIILIPLSIILTLLEKRVRYGSFGN
4049..4738                         amino acid ABC transporter permease; AN634_14890                                     N/A                 MDHSGISVLFEGTNFERLLGGLWVTVKIAAVALIVGLILGIILGVLRTFKNRPLRVVLRLYLEFFRIVPTVVLLFLFYYILPRQLNFNLPGDQLATLVFALWVAAEMSDIVRGALISVPQHQRESGKAIGLNRYQLYRYVLIPQAISLEIPATINLATRVIKTTSLLMLISVMDVINIGQQIIEANNHTHPTGVFWVYGLIFLFYFLIDYPLSWWAKRLEKKRLERANG
4731..5471                         PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; AN634_14895; phage(gi371496158)      2.02e-46            MAEQILQVEHLEKYYQKKHVLHDINFHVDKGEVVTLLGPSGSGKSTLIRCLNGLEEYRQGTITFEGKQINPTEKNWQQIRQKIGMVFQSYDLFPNLTVMDNILLGPTKVQKQDKFAAKKEGLELLERVGLEDYANAYPRQLSGGQKQRVAIVRALALHPDFMLFDEVTASLDPEMVRGILNIIQDLADVDHMTMIVVTHEMNFAQQIADRVIFLEDGHILEQTPSKQFFSAPQTKRAQAFLDSMDF
5492..6346                         ABC transporter substrate-binding protein; AN634_14900                               N/A                 MKERLFTRIIAVVSVFAALLLVLTGCGNSKKSSSQSNNPSSVQQIKKNGTIRIAVFGDLPPYGWVNKDGKRVGYDVTLAHQVAKDLRVKVKFVQVNANNRVDALNSNKVDLVLANFTVTPERKQVIDFAKPYMKVSVGVVSPKNKAIAKASQLKGKNVIVTKGTTAENYFTSKQPDVKLLKFDSKTQQFNALKNGRGVALADDNSYLYAWSKDNPSYTVGIKSIGPKSYIAPAVKKGNKSLLNWTNKEINKLTKQSFFVKDYNTQLKPYFGKEVKPSDIVLPVK
complement(6436..6774)             PROPHAGE_Xantho_33913: IS1480 transposase; AN634_14905; phage(gi21231089)            3.10e-31            MTRANVSDRDGASAMIALHAMHLRQVQNVLVDGGYSGVNFQLDVASNLNATVQVAKRNELHRFEVMPQRWVVERSFSWLENCRRLWKNCERQLTTSLQMVVLAFLALLLKRF
complement(6915..7223)             PROPHAGE_Shewan_MR-1: ISSod6, transposase; AN634_14910; phage(gi24374783)            8.46e-06            MKNYPSNITRQQFELIRPALENFRKRTKPRKYDLYEVFCAVLYVLKTGCQWRQVPGDFPEWRSVYNYYKIWSTKAEPTADSLLEQVLKKLSLLGELTKDVQL
complement(7457..7801)             PHAGE_Lactob_Lj771_NC_010179: MazF-like protein; AN634_14915; phage(gi163932202)     7.68e-17            MVSQGDIFYVNFNPSRGHEQMNKRPAIALSNDLVCQTSNMTIVAPISSTKRNFPMYHRLTSSQTVYGKVLLDQTIALDLRARHVTDETIVDHVSREELEEIITLYKLLFSIDDK
complement(7795..8058)             PbsX family transcriptional regulator; AN634_14920                                   N/A                 MELIKEQTRLAKWGNSKAARIPSQIIKQLKLDDNQDMTITIENGSIVLTPIKKNPTNIHELFKDWKDDGKRDHELDWGKSEGNEFQW
8847..9098                         hypothetical protein; AN634_14930                                                    N/A                 MIGGIIVTQSNLEKQEAKLKQLNQKIKAEKNKIEQNLGKQIIRSANLDYGTLTTPQIKMIGQITSLIRTSPESFNGSLLMMYF
complement(9042..9962)             PHAGE_Staphy_phiPV83_NC_002486: transposase; AN634_14935; phage(gi9635740)           5.44e-64            MGTSTLSRFQRGALAQLVNEGNKSYQVMADALGVAKATISYELDRVKPYDPELAQQDADRKRRNCGRRSMLTAALATLITNHLRLTWSPETIAAAYNLSTASIYNWLNRGWLPFKLTDLPNRNVRQHRVSENRGKFTSGTSIEQRPTTVNQRLAFGHWEVDTVLSSRSESRSCLVTFVERKTRLLWAIKAPNRTAKALNTAFGKFMGAFGPQVKSITVDHGKEFANYQALEQDYQIKVYFCHPYSPWERGSNEYFNRRLRWFFPKKTNFSQVTTDEILAALELINQRPLKIHHQQTAIERFRACSD
10011..10022                       attR                                                                                 N/A                 GATTGCTTTGGG

#### region 2 ####
8311..8347                         attL                                                                                 N/A                 TCAATGGCTGCTTGATCATAAACTAGCATCTGAATGG
8397..8408                         attL                                                                                 N/A                 TCTACAAAATTA
20932..21804                       PHAGE_Staphy_phiPV83_NC_002486: transposase; AN634_14995; phage(gi9635740)           1.77e-64            MVNEGNKSYQVMADALGVAKATISYELDRVKPYDPELAQQDADRKRRNCGRRSMLTAALATLITNHLRLTWSPETIAAAYNLSTASIYNWLNRGWLPFKLTDLPNQNVRQHRVSENRGKFTSGTSIEQRPTTVNQRLAFGHWEVDTVLSSRSESRSCLVTFVERKTRLLWAIKAPNRTAKALNTAFGKFMGAFGPQVKSITVDHGKEFANYQALEQDYQIKVYFCHPYSPWERGSNEYFNRRLRWFFPKKTNFSQVTTDEILAALELINQRPLKIHHQQTAIERFRACSD
complement(22091..22660)           PHAGE_Escher_pro483_NC_028943: DNA invertase; AN634_15000; phage(gi971758535)        3.41e-29            MKYGYARVSTTDQKLANQIELLKLAGAEKIFQEKFTGTTTERPEFQKLLRALKTGDTLIVTKLDRFARNTREALAIIQELFKENVKVNILNMGLIDNTPTGQLVFTIFSAFAQFERDMIVTRTQEGKVYAKQHDPLFREGRPKTYSDEQIRFAYELRKQGMTYKMIERKTGISKRTQQRRFKLIEKDSF
complement(23038..23475)           MarR family transcriptional regulator; AN634_15005                                   N/A                 MVNQQQIKDQFESLTTLQAIQNQAYQMLVQGLAKTEFSMREWGILVYLEQHGQATASELADAFTVTRTLISRNTWRLIQDNLIQSKVNPNDRRIVWLSLTVNGQERVQEGVRQVQANLKTFDQSHNLEKLAKYVEALSQQLAKIN
23611..23622                       attR                                                                                 N/A                 TCTACAAAATTA
complement(23841..24344)           PROPHAGE_Xantho_33913: IS1480 transposase; AN634_15010; phage(gi21231089)            3.46e-54            MAQKRSVYTSFIILDAQSVKNTDPAESSGYDGGKKVSGIKRHLAVDINGLPMAVHVTTANVSERDGANALLALNKSQFDLVQRVMADGGYTGNNFAQSVQAMINAEVIIAKQSDLRHGQVTPQRWVIERSFSWLGKYRRLWRNCERKLNTSKMMISLAFLRILLKRF
complement(24302..24640)           PROPHAGE_Shewan_MR-1: ISSod6, transposase; AN634_15015; phage(gi24374783)            3.01e-05            MKSFAHHYSSDISREQFELIRTDLEGIRKRTKPRKVDLYDIFCALLYTLKNGCVWRDLPSDFPKWETVYYYWLLWTKTPSPAGITPLDKVLKKLSANIGWLRSVQFIHRSSF
complement(24742..26778)           potassium transporter Kup; AN634_15020                                               N/A                 MNKQLERVSFAGALVTLGIVYGDIGTSPLYVMNALIGDAGKMGNISPNYVIGSISLIFWTLMIITTLKYVVIAMQADNKREGGIFALYALVRKNSKWLIWPALIGGAAILADGTLTPAVTVTSAIEGLKKQHLGPVVFSNSQHNVLIITTVVLLVLFMIQRFGTGVIGKSFGPVMILWFGFLAVFGIVNLINYPMILKAISPYYAIRILFSPVNKVGIFILGSIFLATTGAEALYSDMGHVGKQNIYVTWPLVYSTLFLNYLGQGAWIIRHAGDTAYRNLSNLNPFYEMLPGTWRLVGIVLATLAAIIASQALITGSYTLADEAIGLKFLPRMVIRHPSNIKNQIYIATVNWILCIITISVVWFFGSSQKMEAAYGLAITITMLMTTVLLHEFLKKHLAKGTALIIALFFGFIELIFLISSLVKFIHGGYVTLTIMLGILYIMWLWYFGNKRREHYEKESEYVSLLDYRDQLSKLSADNTVPLFTTNLVYMTKIKGDYQIKRSTMYSILDRQPKRAKVYWFVTVNETNAPYESNYTVDLLETHNVVNVQFYLGFRKSQSVSVYLHQIVNHLVEQGILEPQIPTYSTERQRKVGDFKFVIIKEQPADLIVNDKLSSLDRRLIGGRIYLQKITASPISWYGLEFSNVIEESSPLFITQDQDQYLIQKKIYHRGRLSKTEK
complement(26893..27489)           PHAGE_Escher_pro483_NC_028943: DNA invertase; AN634_15025; phage(gi971758535)        1.64e-22            MAKIGYARVSSKEQHLDRQLAALKDVDKLFTDKLSGANTNRPELQKMLAYIREGDIVMVTELDRLGRNNHDLTKIMNSIQNKGATLDVLNLPSMTGIADPNLRQLMTNLIIELYKYQAESERKRIIERQQQGIALAKQQGKYHGRKPQYTQDDPRLQHAFKLYQAGMSDVDVARNTGIKRTTFIRYRKKFNVKVDCKL
complement(27647..28567)           PHAGE_Staphy_phiPV83_NC_002486: transposase; AN634_15030; phage(gi9635740)           5.44e-64            MGTSTLSRFQRGALAQLVNEGNKSYQVMADALGVAKATISYELDRVKPYDPELAQQDADRKRRNCGRRSMLTAALATLITNHLRLTWSPETIAAAYNLSTASIYNWLNRGWLPFKLTDLPNRNVRQHRVSENRGKFTSGTSIEQRPTTVNQRLAFGHWEVDTVLSSRSESRSCLVTFVERKTRLLWAIKAPNRTAKALNTAFGKFMGAFGPQVKSITVDHGKEFANYQALEQDYQIKVYFCHPYSPWERGSNEYFNRRLRWFFPKKTNFSQVTTDEILAALELINQRPLKIHHQQTAIERFRACSD
complement(28994..29497)           PROPHAGE_Xantho_33913: IS1480 transposase; AN634_15035; phage(gi21231089)            4.35e-54            MAQKRSVYTSFVILDAQSVKNTDPAESSGYDGGKKVSGIKRHLAVDINGLPMAVHVTTANVSERDGANALLALNKSQFDLVQRVMADGGYTGNNFAQSVQAMINAEVIIAKQSDLRHGQVTPQRWVIERSFSWLGKYRRLWRNCERKLNTSKMMISLAFLRILLKRF
complement(29455..29793)           PROPHAGE_Shewan_MR-1: ISSod6, transposase; AN634_15040; phage(gi24374783)            3.01e-05            MKSFAHHYSSDISREQFELIRTDLEGIRKRTKPRKVDLYDIFCALLYTLKNGCVWRDLPSDFPKWETVYYYWLLWTKTPSPAGITPLDKVLKKLSANIGWLRSVQFIHRSSF
29994..30596                       hypothetical protein; AN634_15045                                                    N/A                 MRVKNIKRSSIWKIRLSTATMTLIPAAVGINYVAKAFAEGLKLPVWLGTLGTFLASMLAGPVAGAISGFINNVIYGLTLSPVSTVYAITSIGIGIAVGVLHAKRWFSSAKKVFVSAIIIAIVSAVISTPLNVIFWGGQTGIPWGDSIFAVMIANHIPVWISSFTDEFILDILDKVVVAYSAFFIYRQLPQRMIRFFRDDK
30596..31390                       ABC transporter permease; AN634_15050                                                N/A                 MNEPNSILQGSVAHRGWTSVVDPVTKLLMALDLALLSFCFTNLLVEIALVFVALVIILISKAGKSAVHAIEFSSFLIFTMLIIQGLFYSHNQTLLVSVVGIRFYQEGLLYAATMGCRIFVIILATSFFMTTTTVSENSKYLEQVGLSYKAVYVLMSVCYILPEMMANMKKIQMAQRARGINQQKTILEKIKSILPVLVPLVIKTLDQSMERSIALRLRGFNSPHRVELKSANLYRHEMVNHRGLSLLAIILIGWKLWIIGSKFI
31363..32205                       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; AN634_15055; phage(gi371496158)      2.52e-18            MDNRQQIHLENLSLRYRGIETSALKHISVDAEFGHVIGIIGNHHAGKTSLCRALAGIVPTIISGDVTGTIQVGSLSPNLDWQKYNQQTGVVLQNPAGQLSGLADTVADEIAFDLINQGVPADQIKRRVLNVADQLGLGDQLNQSPGTLSGGQKQRLAIATAIVTDPSILVLDDPTSEMDPLGRQHFFSWLVSVEKKTIFIVSNEVDDLCEIADQIWVLKAGELVAAGKPLTVFNHLKPDWQLAEPTVFRLAKLMKWSIPGAADEFPVTNQQLEEAYYAAN
32192..33007                       PHAGE_Bacill_G_NC_023719: gp245; AN634_15060; phage(gi593777701)                     1.24e-12            MPQIEISGLRYTYPEHSFQVEIDRQSFDSPLTAIVGQNGAGKSTLLKLLIGLITPQEGIIMINGVSIDELKPQAKLKQIGVTFQDPDDQLFNATVQKEVAWGLSQIESDQLMIKKAADQALVAVGLADKAAENPYDLSLSERKLLTFATVLAINPAIYLFDEPMMSLDWPSRKRMTNIFHQLVKSGHQVITITHDMDWVAAEFSTVHVMAHGQIAFSGTPSALFGNSGLVKRVGLLPPRIMTITSALGDHSVYLTPEDYCRKHKQVANNLN
complement(33212..34387)           PROPHAGE_Escher_CFT073: transposase; AN634_15065; phage(gi26246249)                  9.59e-64            MNELTTEIIAALAQKQDLDEVFRHHLEIAINQLLQTELAEFLGYERYSYAGINTGNNRNGSYERSFDTKYGQLNLTIPRDRNGRFENHTLPAYGRHSDNLETTVIQLYTKGITTAEIAELIEKMYGAHYSKATVSNMTKAVNEQVQAFQQRRLASQYAAIFLDATYLPLKRDTVQKEAVHIAIGIRPDGTKEVLNYQVAPTESTGIWTELLGTLIKQGVKDVLLFVADGLVGLDEGLNRHFPKAKRQRCLVHVGRNLMNKVRVKDRKAVISDFKQVHRAANREAAELKLNEFANNWHQTYPKLIKDLLKMPNLLTFMDFPPAIRQSLYATNLIENFNKHLKRTTHHKEQFPTEDSLDRFLVSQFNVYNEKSLKRIHRGFKGLQDTLEASFI
34885..35733                       PHAGE_Staphy_SPbeta_like_NC_029119: DegV domain-containing protein; AN634_15070; phage(gi985761237)     3.96e-12            MKKIGLLVDSASDIPAEIKNQVNVEVVPLVVTANNHGYLDRVTIQPQEVYQLIEDGYIPKTASPTLGLVSQYIKKLQQRGYKKIIAITISSGLSVTNKVFKIASENVNNAIITVIDSKSIGIGSGLIAAYAEDLINANYDYQEITKRVQQSVLKSKVYFYIATLKYLRIGGRIGKVAGMVGSVLNIKPVISCDSDGIYYPVAKARSEKKAISRLLKLAIEDASTNESFRLAVAQGNDKAISSHVLTELRNSFPKHTIYTGDVSPALCVHTGPGLIGIAVQID
45975..46011                       attR                                                                                 N/A                 TCAATGGCTGCTTGATCATAAACTAGCATCTGAATGG

#### region 3 ####
complement(39027..39746)           PHAGE_Ralsto_RSA1_NC_009382: transposase IRSO15-like; AN634_15095; phage(gi145708108)     4.27e-07            MSFICIDADTHKSVKVLSDRLNRTIKQFFLSQYSTAERAAVQRVIMDMNASYQAFVHELFPNAELIIDRFHIIQLMGRTMDTIRTQCLKQLDKHSREYKVLKSLWRLFHKANPDAQKSRYLFGLNEYSTEQNAIDIGTDTFPAFKTAYETYIDLHDALMGRHADELKNIITNYQPNGTPLDTAMHTLRKNLNGVINAAKSSYSNGPIEGINRKVKELKRACYGFSNQANMFTRVYQLIA
complement(39890..40228)           PROPHAGE_Xantho_33913: IS1480 transposase; AN634_15100; phage(gi21231089)            3.10e-31            MTRANVSDRDGASAMIALHAMHLRQVQNVLVDGGYSGVNFQLDVASNLNATVQVAKRNELHRFEVMPQRWVVERSFSWLENCRRLWKNCERQLTTSLQMVVLAFLALLLKRF
complement(40369..40677)           PROPHAGE_Shewan_MR-1: ISSod6, transposase; AN634_15105; phage(gi24374783)            7.99e-06            MENYPSNITRQQFELIRPALENFRKRTKPRKYDLYEVFCAVLYVLKTGCQWRQVPGDFPEWRSVYNYYKIWSTKAEPTADSLLEQVLKKLSLLGELTKDVQL
41076..41738                       polar amino acid ABC transporter permease; AN634_15110                               N/A                 MSSWAVIQQSLPMFEKGFQLTLWLSFVGIIGSIIVGIIVSLLQYFKVPVLHQVASIYVEVSRNTPLLIQLFFLYYAFPVIGIKFGAELCGIIGLIFLGGSYMAEGFTGGFNGVSKGQLESGKAIGLSRWQLARYIVFPQGFSLSVPAMAANVIFLIKETSIFTVIAIPELTNTALDLIGMYYRSNEYLLVLVVGYAIILIPLSIILTLLEKRVRYGSFGN
41719..42408                       amino acid ABC transporter permease; AN634_15115                                     N/A                 MDHSGISVLFEGTNFERLLGGLWVTVKIAAVALIVGLILGIILGVLRTFKNRPLRVVLRLYLEFFRIVPTVVLLFLFYYILPRQLNFNLPGDQLATLVFALWVAAEMSDIVRGALISVPQHQRESGKAIGLNRYQLYRYVLIPQAISLEIPATINLATRVIKTTSLLMLISVMDVINIGQQIIEANNHTHPTGVFWVYGLIFLFYFLIDYPLSWWAKRLEKKRLERANG
42401..43141                       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; AN634_15120; phage(gi371496158)      2.02e-46            MAEQILQVEHLEKYYQKKHVLHDINFHVDKGEVVTLLGPSGSGKSTLIRCLNGLEEYRQGTITFEGKQINPTEKNWQQIRQKIGMVFQSYDLFPNLTVMDNILLGPTKVQKQDKFAAKKEGLELLERVGLEDYANAYPRQLSGGQKQRVAIVRALALHPDFMLFDEVTASLDPEMVRGILNIIQDLADVDHMTMIVVTHEMNFAQQIADRVIFLEDGHILEQTPSKQFFSAPQTKRAQAFLDSMDF
43162..44016                       ABC transporter substrate-binding protein; AN634_15125                               N/A                 MKERLFTRIIAVVSVFAALLLVLTGCGNSKKSSSQSNNPSSVQQIKKNGTIRIAVFGDLPPYGWVNKDGKRVGYDVTLAHQVAKDLRVKVKFVQVNANNRVDALNSNKVDLVLANFTVTPERKQVIDFAKPYMKVSVGVVSPKNKAIAKASQLKGKNVIVTKGTTAENYFTSKQPDVKLLKFDSKTQQFNALKNGRGVALADDNSYLYAWSKDNPSYTVGIKSIGPKSYIAPAVKKGNKSLLNWTNKEINKLTKQSFFVKDYNTQLKPYFGKEVKPSDIVLPVK
complement(44106..44444)           PROPHAGE_Xantho_33913: IS1480 transposase; AN634_15130; phage(gi21231089)            3.10e-31            MTRANVSDRDGASAMIALHAMHLRQVQNVLVDGGYSGVNFQLDVASNLNATVQVAKRNELHRFEVMPQRWVVERSFSWLENCRRLWKNCERQLTTSLQMVVLAFLALLLKRF
complement(44585..44761)           transposase; AN634_15135                                                             N/A                 MKTGCQWRQVPGDFPEWRSVYNYYKIWSTKAEPTADSLLEQVLKKLSLLGELTKDVQL
complement(45123..45467)           PHAGE_Lactob_Lj771_NC_010179: MazF-like protein; AN634_15140; phage(gi163932202)     7.68e-17            MVSQGDIFYVNFNPSRGHEQMNKRPAIALSNDLVCQTSNMTIVAPISSTKRNFPMYHRLTSSQTVYGKVLLDQTIALDLRARHVTDETIVDHVSREELEEIITLYKLLFSIDDK
