gi|00000000|ref|CP013340.1|  Raoultella ornithinolytica strain Yangling I2 plasmid pKPYL2, 140936, gc%: 52.66%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
21896..21907                       attL                                                                                 N/A                 TGCTGACAGTTG
complement(22641..23465)           PROPHAGE_Xantho_33913: IS1477 transposase; ATN83_p20025; phage(gi77747809)           1.13e-100           MCDATGLSQRRACRLTGLSLSTCRYEAHRPAADAHLSGRITELALERRRFGYRRIWQLLRREGLHVNHKRVYRLYHLSGLGVKRRRRRKGLATERLPLLRPAAPNLTWSMDFVMDALSTGRRIKCLTCVDDFTKECLTVTVAFGISGVQVTRILDSIALFRGYPATIRTDQGPEFTCRALDQWAFEHGVELRLIQPGKPTQNGFIESFNGRFRDECLNEHWFSDIVHARKIINDWRQDYNECRPHSTLNYQTPSEFAAGWRKGHSENEDSDVTN
complement(23498..23761)           PROPHAGE_Xantho_33913: IS1404 transposase; ATN83_p20026; phage(gi21232568)           2.38e-32            MKKRFSDEQIISILREAEAGVPARELCRKHAISDATFYTWRKKYGGMEVPEVKRLKSLEEENTRLKKLLAEAMLDKEALQVALGRKY
23905..24114                       PHAGE_Entero_HK022_NC_002166: IS903 transposase; ATN83_p20027; phage(gi9634149)      1.64e-42            MTGSNARWKWTTDYNRRSIAETAMYRVKQLFGGSLTLRDYDGQVAEAMALVRALNKMTKAGMPESVRIA
complement(24481..24639)           hypothetical protein; ATN83_p20028                                                   N/A                 MTRRDNYRHRALSGINDFSFRYKEKTIYTLDKSEKNSSCITSGRVKHLSLTY
complement(24787..25044)           hypothetical protein; ATN83_p20029                                                   N/A                 MDKKYDFSLSYEALTRVCENAICEHIRRAGSLEGLGFALEYTKAYAILEGWSLLAAAGDTFPALIEKDRIYLLQLISGKNNIELH
complement(25667..26242)           PROPHAGE_Escher_MG1655: IS5 transposase and trans-activator; ATN83_p20030; phage(gi16129935)     6.22e-112           MTQGTLVDATIIQAPSSTKNKHNSRDEDMHQTKKGNQWYFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQVGKLLHGDEEFISADAGYQGAEKRDELSDVSADWLIAKRPGKVNALKQHPRKNKLAIRYEYLKASIRAKVEHPFRIVKCQFGFVKARYKGLAKNDSQLAMLFTLANLVRVDQLIRAQARST
complement(26260..26388)           hypothetical protein; ATN83_p20031                                                   N/A                 MGSCAAPSAKGDDKFITTDYLQQCRWSSMNWPAKSSVPLITG
26379..27083                       PROPHAGE_Brucel_1330: transposase, putative; ATN83_p20032; phage(gi23502708)         4.92e-53            MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKVAYRFLGKTLNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
27105..27135                       attL                                                                                 N/A                 GCTGCCTCATCGCTAACTTTGCAACAGTGCC
27338..27838                       Ferritin-like protein 2; ATN83_p20033                                                N/A                 MIASGIVQKLNAQMNQEFYTSNLYLQLSQRCSENSLNGTALFLRHQAQNTVTQMMRMYEYIKQSGATPVLQEQHARCGEFSTLEDLFEQTVSDYQKRINALTSLTEDAQAANDKSTINFLKRYRKEEIVDGTLLQIILDEVRSAKKAGINMQQTDHYLVGVIDRYH
complement(27986..28966)           PHAGE_Bacill_BMBtpLA_NC_028748: IS5 transposase and trans-activator; ATN83_p20034; phage(gi971482498)     0.0                 MSHQLTFADSEFSTKRRQTRKEIFLSRMEQILPWQNMTAVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNNEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGRVKTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRVDQMIRQWERSQ
28965..29129                       hypothetical protein; ATN83_p20035                                                   N/A                 MMSLWDALRMNMMISYQELVRTFPKSPAACLPHIEHYRPISTLSPGKDVKIMYK
complement(29244..29525)           PHAGE_Entero_N15_NC_001901: gp48; ATN83_p20036; phage(gi9630515)                     3.83e-15            MKLVSHKELHNEWMQDDEYRAAWQEEERKEKLRELLAEWRKHDNLTKAQVAERMGVTPPVISRLENNITKASIDTLTRYAHACGIKKPVIALY
complement(29506..29835)           PHAGE_Entero_N15_NC_001901: gp49; ATN83_p20037; phage(gi9630516)                     6.92e-24            MFSVVYHPEAREEATALPVKIRVKFDRLIGKLEYDARLLREPDTKPLGDGLFEIRTMGTDIARGIWVYHKGNTIIMLRVFIKKSQKTPAKEIDLAKKRLAEVLNETGKP
30334..30462                       hypothetical protein; ATN83_p20038                                                   N/A                 MPRALAWGATFEALAPMLFGYPLFKGDNSNVFYFLVYLLIRK
30616..30780                       hypothetical protein; ATN83_p20039                                                   N/A                 MYYKGFPGVSTPVFMVSVCSSVKIKGRDCGTINGHDESSSIRTLMKDAREVLVR
complement(30881..31903)           PROPHAGE_Shewan_MR-1: IS110 family transposase; ATN83_p20040; phage(gi24375433)      2.16e-65            MTITTVGIDLAKNVFAVHCVDQHGKTVLVKPKVSRAALPELIASLPPCVIGMEACSGAHYWARLFRQYGHEPRLMAAKFVSPYRMAGKSGKNDAADAQAICEAVRRPHMRFVPVKDESQQAMQCLHRIRQGFIEEKTATYNRLRGLISEFGVIAPQSTDALRHMVSEQKSSLPLQVQQCVNDLLEHIDRIEDNITEYDRILSRMAKTDHRSQRLMELKGIGPTTACALVASIGNAHDFKNGRQLAAWLGLTPSQYSSGGKSKLGRITKAGDSYLRTLLVQGARSVLIGAEKRTDLFSRWVCSLVDRRGYWRAVVAIAAKNARLCWASLHYGDDFRLYSAS
complement(32056..32772)           PROPHAGE_Brucel_1330: transposase, putative; ATN83_p20041; phage(gi23502708)         2.73e-53            MGLHMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
32785..32961                       hypothetical protein; ATN83_p20042                                                   N/A                 MISLSPPTICNSALCRHLCSGKQAGQNSLGTDGATANLRSIKAEIHQFKQSFIWFCEY
33443..33688                       HTH DNA-binding protein; ATN83_p20043                                                N/A                 MSQLEHVHLKEDEFEALRLVDLLGMQQQEAAVAMGVSRQTLANVLKAARFKVVDCLTQGKALIMHSEREGVTQDDHSHSSE
33663..34124                       hypothetical protein; ATN83_p20044                                                   N/A                 MITAIPVNDDRVANHFTKASHLVLVDERGVELSRTENPALGADCSGKRKLVDLLVQQQVSRVVVRNIGERMLGKLLGHQIAVYQNDCGRRLFTELCDPDTRVLTELNKPEQGRQSFHHEAKGKKCCHSDGNTAENACQGGRQHHHGNGRCCHS
34285..34722                       hypothetical protein; ATN83_p20045                                                   N/A                 MNCYLDARKAHTCCMVCSSRDNNPDTVNLMFSEHPDGSVCADYTANHRHQGYTGLLHGGMTSTLLDAAMTHCLFMQGVQALTAELTVRFISPVCTGDKLMVCARLLGQRRGIYLLEAWLTKGQQTVARATAKFIVPSQDIALAHR
34837..35313                       PHAGE_Clostr_phiCT19406A_NC_030950: hypothetical protein; ATN83_p20046; phage(gi100019)     1.77e-22            MSKQIIDIGIAESSRVEIADGLSRLLADTYTLYIKTHYYHWNVTGPMFNSLHLMFENQYNELATAVDDIAERIRSLGCFAPGTYHEFSRLTAVNEDKDIPAAKNMIENLVQGQETVVKTARSLFPLVNNANDEATADLLTQRIQLHEKTAWMLRSLLE
41567..41597                       attR                                                                                 N/A                 GCTGCCTCATCGCTAACTTTGCAACAGTGCC
43818..43829                       attR                                                                                 N/A                 TGCTGACAGTTG

#### region 2 ####
36760..36771                       attL                                                                                 N/A                 GAACGGCGCTCA
40829..41545                       PROPHAGE_Brucel_1330: transposase, putative; ATN83_p20056; phage(gi23502708)         2.73e-53            MGLHMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
41631..41771                       hypothetical protein; ATN83_p20057                                                   N/A                 MLAHTGLPVGTIAQTLGFEETTHFSKFFKRVADLTLGEFRLKQTES
complement(41869..42285)           VagD; ATN83_p20058                                                                   N/A                 MNKIYMLDTNICSFIMREQPEAVLKRLEQAVLRGHRIVVSAITYSEMRFGATGPKASPRHVQLVDAFCARLDAILPWDRAAVDATTEIKVALRLAGTPIGPNDTAIAGHAIAAGAVLVTNNVREFERVPDLVLEDWVR
complement(42282..42512)           Virulence-associated protein vagC; ATN83_p20059                                      N/A                 MRTVSIFKNGNNRAIRLPRDLDFEGVSELEIVREGDSIILRPVRPTWGSFAQLEKADPDFMAEREDVVSDEGRFNL
42681..42797                       hypothetical protein; ATN83_p20060                                                   N/A                 MDMLNLYIVLSFSAEIRKKLVPDLIQPRRRAAARQHKM
complement(42755..43030)           hypothetical protein; ATN83_p20061                                                   N/A                 MNLPSEIINQDITIIHTVTLLNYRMAVSGRSDFFAYNNFPEVYHGQGISKAAFSGGERQVTGEGMDTTYSVIVSWEHRYILCCRAAARRRG
43140..43358                       CcdA protein (antitoxin to CcdB); ATN83_p20062                                       N/A                 MKQRITVTIDSDSYQLLKSADVNISGLVNRAMQNEARRLRAERWQAENQEGMAEVARFIEMNGSFADENRDW
43360..43665                       CcdB toxin protein; ATN83_p20063                                                     N/A                 MQFKVYAYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDKVSRELYPVVHIGDESWRLMTTDMASVPASVTGEEVADLRHRENDIKNAINLMFWGI
43778..43789                       attL                                                                                 N/A                 GTCTTTCGCGGC
43859..44710                       hypothetical protein; ATN83_p20064                                                   N/A                 MTDGVTRTDVDKTMWLVTLADIITNNSTRQEENLVVILSREESWGPASERNSNALYRASCIMTLYLADTEQTKTQTFTANYWPLLSSLHLFTEEFRLEERLRGHGLGTWITQQFVLWARGLPPETRVWPIDISKADEKSEENQIRRDRLWHAMGFRFPAGHNCSMPLGVDELQLPRSRSSTLRVEPLASGVRRLEDGYRGLQEKIVQLEGEILSKKQLIGSIKKHPFLHLLHRKWRPLPDGKCDALPLRAAKLSLPQSGDSDQEVEQRATGVIRLATLCAQSQ
44918..45079                       hypothetical protein; ATN83_p20065                                                   N/A                 MPENIVSVITDGVVLFATSSVFWLAVAGWLVILTPVILRRKFSAKKKVNRNYE
45126..45866                       PHAGE_Mycoba_Squirty_NC_026588: non-functional integrase; ATN83_p20066; phage(gi764159894)     5.58e-07            MAIDYPAALALRQMALVQDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLTPPYPFVQLATLKQRAEKAARTAGRAPAGSQVHRLVPLSDHHYVSQLQMMVATLKIPLERRNKHTGRIEKARIWEITDRTVRTWLSEAVEAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPEAEAVALIKKLTPDQST
complement(46306..46485)           hypothetical protein; ATN83_p20067                                                   N/A                 MSISFFEENLKDIDDLITGEMISGKSRVNRSDVVRAAVEALKSLSKTEISRLIAEAKQR
complement(46605..47231)           PHAGE_Sodali_phiSG1_NC_007902: ParA-like protein; ATN83_p20068; phage(gi89886027)     1.60e-30            MIIVLGSQKGGVGKSTLAVSIAAYLMSLGNRVIIVDADDQKSVLTWYNNRPEDLPHIPVTGATGNIKAMLKEHEKSYDFVIADCAGRDSAEMRSGLMAADVFISPLRPSQMDLDVVPHTCSVFTAAKDFNEDVRGYLVLNMTPTNMFVNEANQAADVLKDYPEMRLANSRVCDRKAHRDAWAESMTIFETQNDKAQQEIESLVKEVIL
complement(47808..48683)           PHAGE_Entero_P1_NC_005856: RepA; ATN83_p20069; phage(gi46401683)                     1.41e-109           MNENVYIGEVIGPDCESVNNKLTVTSKATVQPVALMRLNVFVPSSRPAKGTRTSIDATSVLKDLEFSRREGYDDIRITGERLSMAIDFKVWVGIIEAFSKYGLKTNSIKLTFHEFAGMCRFESKRFDSRLRKSISEALTRIRGKTITFTRSDSEGLQKVSVTGLLKTGELDFANDQVELEADQRLWELYQTDYTVLLRHKPINALTRKEAAQALYTFIESLPTNPVPISFKRIRDRLSLLSPVKEQNRIIKLALKQLQDIGYLDHSITKKGKETFILIHRRSANLKPGTAV
complement(49095..50366)           PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; ATN83_p20070; phage(gi431811050)     0.0                 MFALADVNSFYASCERVFRPDLKGKPIVVLSNNDGNVIARSAEAKPWIKMGTPWFQIKNERYPEKIYSFSSNYELYASMSARVMNCLEELAPRVEQYSIDEMFLDLTGVEHCMELEDFGRQLRQHVYDCTHLTIGVGAGPTKTLAKSAQWASKEWKQFRGVLALTRGNPQRTRKLLSLQPVEEIWGVGNRIARKLNVLGIKTALDLALTNPAFIRKNFSVVLERTVRELNGESCLSLEEAPPTKQQIVCSRSFSVKITEYESLRQAICQHAERASEKLRKEHQYCRHISVFIKTSPFAVKEPYYGNVATEKLLTPTQDTRDIIAAATTALERIWRDGHRYAKAGVMLNDFTGSGVSQLQLFDERPPRPHSAELMRVLDGINNSGLGKVWFAGRGIVPSWQMKRDMLSPAYTTRWRDIPVARIG
complement(50366..50797)           PHAGE_Cronob_ENT39118_NC_019934: protein umuD; ATN83_p20071; phage(gi431811072)      4.58e-34            MKLQLFSTGKEHPPQAHPLFADLASCGFPSPAADYVESDLDLHDYCIRHPSATYYLRASGDSMADGSLYNGDLLVVDSAEKPRHGDIVVASVQGEFTVKRLLLTPRLTLQPMNASWSPIYPDPDELDIFGVVTHIIHRPREMY
50981..51208                       PHAGE_Entero_P1_NC_005856: InsA; ATN83_p20072; phage(gi46401643)                     6.94e-48            MVRNGKSTAGHQRYLCSHCRKTWQLQFTYTTSQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSDRSR
51253..51630                       PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; ATN83_p20073; phage(gi557307573)     3.16e-80            MDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLSTLERLLGLLSAFEVVVWMTDGWPLYESRLKGELHVISKRYTQRIERHNLNLRQHLSRLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
51688..51837                       hypothetical protein; ATN83_p20074                                                   N/A                 MVPAPAATRPFPCLPLPVDFAFSGIYVFSAIAAPAKRYFPVVAGAKVAG
51929..52054                       hypothetical protein; ATN83_p20075                                                   N/A                 MKTPGMLFVLLLGAGFLTGRDIRQEVRVKKTTSPFCPSAPV
52074..52199                       hypothetical protein; ATN83_p20076                                                   N/A                 MSIVIVENHRVSCCVYGEFIVLKFLKMFKYEHCKAVNKAGI
52240..52488                       PHAGE_Erwini_PEp14_NC_016767: hypothetical protein; ATN83_p20077; phage(gi374531851)     3.37e-11            MTGFDLILWRRGLNWTQERAAAELGISRTSLVKYEDGEAVPRTIQLATAALTLKAEWPTMKTMSKDRLLRQLKHEVLRLSNE
52616..53044                       hypothetical protein; ATN83_p20078                                                   N/A                 MLPGQPTDYGRFCNVSGIASHGETYRVSDSQDFWLTPNGRYLSQAEYSSPADTLQKLTGVVSGEDPDQARKKAVRVRVFRVESESASKGACLPVRYDDNNARRKMDSLTNGRRMKVYSEDAGQSGQLIYDNSRGAGFSYRLL
53111..53851                       PHAGE_Bacill_phi4B1_NC_028886: site-specific recombinase; ATN83_p20079; phage(gi971821285)     1.99e-06            MNTFPLQIPQNSRSDAIETGRVAYVYFDYADALALREMASQADLPKYLLAPEVSLFLRYVPDLRQQVLFDTLWNTGARINEALALTGASFQLDGSRPFVRLKTLKQRQRGRGRPGKDEAVFRIVPLTDPQYVRKVREFLTTLRIGKQQLLWPVQSDNTPRNWIRKALDLAKRDSVTFSIPITCHTFRHSFCMHLIQHGVPLKVVQAYAGHSRLETTETYTRVFALDVGRQYGVRFSLPDSHLTLPE
53919..55067                       PHAGE_Entero_P88_NC_026014: recombinase; ATN83_p20080; phage(gi744692717)            7.64e-113           MQDGLALVCWFLFVIFLYFSTLVRLFVFTRKPGYVIIHLNVVFFLMDTVFFLNNVRFEMRIFVDDGSTNIKLAWVADGEVKTLISPNSFKPEWSMTLLTDSTGPASANYEIDGEKYSFDQLSPDAVRTTETRYQYSDVNVVAIHHALMQSGIEPQPVDIVVTLPLGEYLDENDQPDMAKIERKKANVKRAVTVQGHESFTVRKVSVLPESVPAGFSVLKDLDDLDSLLIVDIGGTTLDIAHVRSKMSGFTKTHCDPKTGVSIITEAVKHALDTSVSTRTSSYFADRLIQARNDDSFLSRYLQNADQRAQVMKVLHEREKALTHRVTDSVGRFAGFTHVMVVGGGASLVASAVKQATGVSDDRFFVSDNPQFDLVLGMVAMKG
60758..60769                       attR                                                                                 N/A                 GTCTTTCGCGGC
63550..63561                       attR                                                                                 N/A                 GAACGGCGCTCA
