gi|00000000|ref|CP013615.1|  Clostridium perfringens strain JP838 plasmid pJFP838A, complete 404393, gc%: 24.74%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
7802..8407                         PHAGE_Pseudo_EL_NC_007623: putative thymidylate kinase; JFP838_pA0008; phage(gi82701134)     1.47e-43            ClostridiumperfringensMKGKLICIVGGDGVGKTSVIEKVYEILTKKGLVVTKTREPGGVESAEKIRDIILNYNIDGITEALLFAGARRENVVNNIKPALKRGEIVLTDRYLHCSLVYQGIARGLGYEKVLEINRLAIEDCIPDLTIVLDMDTSKAIKRLSDRNDINRLDKETLEFKEKVRNGYLSLANKMSNIVVINSDKKLEDVVEDVMKKITPLI
8532..9149                         PHAGE_Thermo_THSA_485A_NC_018264: transcriptional regulator, XRE family; JFP838_pA0009; phage(gi397912660)     1.29e-06            ClostridiumperfringensMIIKLDKLSDIFNKYNYFLTDTKNTCEIDCFVRKYMEEKKVKIKTLAENTGISRQTLYLIAQGEINPGIDYCLKISEALNVPVNELFKLNENSWCKPVKIDGLSCFLDFKYLEIIDFNERKSRVKKEKDLFYDSRDKVTLTKEEYENLKEKFLEENFKDVLIQTKKEYPCKSEKSINKLAKDNLLLKFNDRYFDRFQKLAEKLHK
9292..9822                         PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; JFP838_pA0010; phage(gi100017)     2.24e-09            ClostridiumperfringensMNYNAHRIGGVCFGIVSSCLIYQTPPTEEKLALSIILISGAYVGSLIPDLDHPKSYLGKKFKTLSNTLNKLFGHRGLTHTPIMYFIFSAILYLISVFIHGNTQIIYTQFAIGLSLGYLSHLFMDSLTKAGIPLLYPLKGYYSLAKFTTGQDDTLVSSLFIIFTGIFLIYFTGVLYI
10233..11927                       PHAGE_Bacill_0305phi8_36_NC_009760: RecJ; JFP838_pA0011; phage(gi156564062)          1.37e-84            ClostridiumperfringensMKKLIYNNQKQVIDDLLAKGEVNLDRNVIEILINRGYKTSKEINEFMNLSMDNLHNPLLLPDAEKACLKLIEYRDKQEEVTIFGDYDVDGAMGTSVLFNSLKKLGFKVNAWTNNRFVEGYGINPLGVENMLKKFPNTKLVLTVDNGIVAYDGVEACNKLGIEVIVTDHHDANEELPKAYAVVNPKRKDSKYPFRELCGTGVAFKVMLLLYFMLNEDLDFVYDMLDMVSLATVADIVPLIDENRIIVKEGLSKVRSENRAIFRIFREITKVTNINTYTFGFVYGPMINAIGRLEGGQLETIEAFTSNDELFIEEVINKLFNLNEKRKEMTELQMNICEDELSKNGEIPEVIFVYNKDFHEGVVGLIAGRLKEKYCRPTFVLTEHNGVFKGSARSIDNYHIKEVLDMIKDDLLGYGGHAKAGGVSVSSEKLEVVKEKLINIAKEKLTPDDYIPKLTIDTVLDANNISIHDIEQFDLLEPYGEGFSKPLFGLTNFEGVEYKFIGDKHQHVKIKGKNIDILGFNLGETYEKMGCPLYVKVVGHPSINTFNNMQSTQFIIDHEIIKRYK
12045..12551                       hypothetical protein; JFP838_pA0012                                                  N/A                 ClostridiumperfringensMCKPPKKPLTIEGKSKSYFEYLAELVSPYLKEYNVILSFKGYSETLNGYSNISSKSDKELCELANDLNAWTEYMTDLSSLIQKILLDSETEKIQTIAIASINADAKKVSAGDRIANKENSVVAVRKKRNTLKAFYTAIEEKANFLERAYHHCKQIYDCNIKLKLENRR
12567..13013                       hypothetical protein; JFP838_pA0013                                                  N/A                 ClostridiumperfringensMSSHVVNKKKIKKSLFNFKNMAMKINDYLKDDEITFSFEGYNALLLHYFKFIENYIDDISDLLTELNLWFNTLSEFEGFIELKYLECELEFDIIIAKNYNSGSEFYENMRKKKFHFKEFLRQIQSQKKMILNANWHCSKELRTSIKKY
13034..14044                       PROPHAGE_Escher_MG1655: DNA strand exchange and recombination protein with protease and nuclease activity; JFP838_pA0014; phage(gi16130606)     1.73e-133           ClostridiumperfringensMVDIKAEKLKAIEMAMGAIEKQYGKGSVMMLGDNTRANIDCISTSSLKLNRALGIGGLPKGRITEIYGPESSGKTTVAIHVCAEAQKLGGVCAYIDAEHAFDVNYAKNLGVDVDELIFSQPDCGEQALEIAEKLISSGAIDVLVVDSVASLVPRAEIEGEMGASHVGIQARLMSQALRKLTGLINKSDCVVIFINQLREKVGIMFGNPETTPGGRALKFYASVRIDIRRIGTIKGKDGEMVANETKIKIVKNKVAPPFKEDKFEIEFGKGIDSIGELIDLGVEYQIISKSGSWFAYGDIRLGQGKPKVKEFLLDNLDIKVEIEKLIYEAMNIPYKE
complement(14641..15795)           PHAGE_Clostr_phiCD211_NC_029048: hypothetical protein; JFP838_pA0015; phage(gi981220983)     6.01e-12            ClostridiumperfringensMFLRDFCDIGKEALKQIINGFEINIQPTAINIKKADFSLCPKSCEALCKKDASYCQKINCNLLNLKNITNEEALLETENMSKDLIYEEVYSAEKNKIVHLSKYQILEFLTLHFMVKRTDGLIKNVSFSKLAKFLNCSLNTVISNSYLLADYNLIAIQKVDVDTYDISICEYKNYFLTKEYGGKGYMQITKEVLTTLLSLDNKDLSINLVKTVLKELLDYSNKRISKIFDITEDEDNYTIEKNLKEIKKSLPKRFYKKTILKLYNKLKSLNLFNVDFVDRIIVMKPTNRADGYTIAKESKKRFFNIVKSKIEVLNKKLQKEKSVVEITDSQVKGVVDLCTYYGVNNVCNILDLFQNSLKFKDRVEDGKLLPDLIRNQLSKINFNA

#### region 2 ####
69870..70433                       PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; JFP838_pA0069; phage(gi100002)     1.75e-30            ClostridiumperfringensMSSCSFTGHRCDLLYGWNIDIKEYKILAQIIAKHCRELIKKKNVSKFYTGGALGFDTVAFWTINYLKKEFPNIKNVLCIPFEGYNKNWYNKADIERFHRMLSVADEIIYVNKMPGYETVIVDSENVTKEEANVMLERRNHFMIDESYHLISCWNGIKKRGTFKTIKYAENKKKKIININPKEVYAYI
complement(70478..70780)           hypothetical protein; JFP838_pA0070                                                  N/A                 ClostridiumperfringensMNNKAIVRETKILRKILGFSNSIKLSKYLLEIGDRYYVDSLDFLKDLGCTSEMFIEGYCSADGGAKGYYLITVPKLDKNVRGGVFKIKFDCCGYCKVELA
complement(70898..71389)           hypothetical protein; JFP838_pA0071                                                  N/A                 ClostridiumperfringensMKESNFKIINNTNFDKKQSDNNKNTLIYKNADLYIFSFNTYDIKNKKVIGVEKNGLVPLLRVENSNYLLYITKIKGDIRARFFRKSDSLLIIDENYNIESNNQIELTNELLKLFSKCTKLNNNIDEFNMINNDLRVPKTQNKQPKSLFKRTILKLLYKSKLID
complement(71883..72266)           PHAGE_Thermu_OH2_NC_021784: immunity repressor protein (phage-like protein); JFP838_pA0072; phage(gi526118362)     7.71e-08            ClostridiumperfringensMKNLGEYLKDLRVNKGVSLLQVENDTNISASYISRLENNKRNEPAPSICYKLASYYGVDVEDIFKHAGLPINISKSEVLKETKFLNKENFEETVRIIDELICKAKSLDTDSIDSILKFANYIKENVK
72511..72957                       PHAGE_Shewan_1/4_NC_025436: RNase HI; JFP838_pA0073; phage(gi712913627)              3.54e-07            ClostridiumperfringensMKNIEIYVNSICKEGQSAYCNKLIYESYSKSNCVNGAYMDSSIIELKSIVDSLKMLKQPCAVNLYTKCEYIVKIYEEGTLDTWVKNKWTTNNGYRRSSKEVSNKELWFELYMLSKIHNIKLIRVSKKHEIMKKMKWYMSKKIDGNLFS
73068..75680                       PHAGE_Bacill_0305phi8_36_NC_009760: PcrA helicase; JFP838_pA0074; phage(gi156564011)     2.72e-39            ClostridiumperfringensMNIKQLLSKKSCGFKGKMDILKLEGEKGVTYYSSIALKNILKTAEREKLLDCEWVNEELLKYMGSLEDNNFKLFDYEDDLKLMAKEIERYAKFELDKFNVIQFQEIGFVDVGDESINVSFDIVLSPKDEENVVFVCKFDRKKPKLSFKARKDENKPYFDMELYLMKKLAEKTNKFKGKIIIPGFIHLKSKKDKSNKFEENFDNKKGENFVYANSLFDTQIVDEITRLINCNEFSRCLSSECDFCQYRDMCKFLECNNTVQSKKIKEVKKASSDFALNYQQYKVINFEEGNLIVNAVAGSGKTTVLAKRVLNLIKKGYDPKDILLITFSEKGCQEIFEKVEFWKKQEKLPFKIKDLSINTFNGFCSNLLDKHYKDVGFKTKPILLDNVMKCQILSEVLSINEKIDNMNYKRPFMNVFNSKGVCIELIDKFEILDRYQVSEKEEVEYLLGEDLNSELILKIYNEYKTELKRRNLIDFQDQINLGIKILINCETHDYKHIFVDEFQDSDKNQLFIIRKLIENPNFMSLVVLGDENQSIYGFRGTSSDNIINFDKNFSNVEDANLDKNYRSTKQIAQLANAVNCMNGSDKRIVALRDGSYVDLMQGKFILNEIENLINNGAKYEDIAIISRNKAQLRNFKKELEAKLIPSVLSVSVSLGDSIYVKKVIDYAYFLNNQSLNLNYLNFLQMLNEDVLNLSVDDIRDYLDLKLNEFKIKYNIDELNSKEKLKLYLNEVKCLSKGNSDIKAYYSLIKSFKFKNIDELLEYLKYFKTVGSDASLNNSCENYEAITLITAHSSKGKEYKYVFLLLDEFLLNVKRRDIGLEELYIEGERDEMNLLYVGITRAKEKLYCVSDKSIGRAMFALRDTFKSREII
75793..76242                       hypothetical protein; JFP838_pA0075                                                  N/A                 ClostridiumperfringensMDKFNRNNVEKKFNEFLLKSFSSTIFVKDKSLTNEIPLELVDKPLRVVQEIIMPYFDNSLNINIKSQIFGNVFYVGILDAVRESNLVNIVYSIEKLDEEKFIIKDVKVVIEPYMIDNKEEVLSKQTEYFDKLLSESIDNPNPLVDFIDN
complement(76287..76835)           hypothetical protein; JFP838_pA0076                                                  N/A                 ClostridiumperfringensMETFNIRLVYINFSELQLIKAFEKIGWRYIKSLNKDTCEFKGIIWYSSDILIINELFKEQKVRVFCAKSLNGDFCIYLFFTKFKINNGNITINFRHNAFRRFYGKLGGFITKWEDDERNHHVGNCKDNLKCYYSLYFEFEEKYKEISKKENLSIKDCILVSTKLLLLNSEKINKHVCVYNDI
77009..77377                       hypothetical protein; JFP838_pA0077                                                  N/A                 ClostridiumperfringensMKVNLNKLDILKYEKDMKDKFIGKIFNCFMSTDDMAWQWDITDEFERRFVIYSKENINSKMFLQHNVKVEDNIIHLFLYDAINDTIVLSVDIEYERRNNKLKIIELKVVQTNPDWRVEYVES
77364..77858                       PHAGE_Bacill_vB_BanS_Tsamsa_NC_023007: hypothetical protein; JFP838_pA0078; phage(gi564292650)     1.62e-06            ClostridiumperfringensMSKAKDFSVISRYLNNIKSIKLRKKEFRKEIKKHFQYMTQKEILRFMNLQKKFRKKQPMVDSHAKRRMRERYIPIRDVMVAIKYGGIVEYSCILDKNNFIIDERIMFRSLRPRQYQVVVMYSLRSNSIITVYKKSVEAVPERHKLDIYDKNFDILKVKYKKRLT
complement(77866..78048)           hypothetical protein; JFP838_pA0079                                                  N/A                 ClostridiumperfringensMPDFTKITIIFIIHALIFYFTGLYGIIDRFPNSILFAYILWFYLIGIYLVRKKDKKQKRD
78295..79068                       PHAGE_Bacill_Eldridge_NC_030920: hypothetical protein; JFP838_pA0080; phage(gi100067)     4.96e-07            ClostridiumperfringensMIATVNVNYTDLKNKNDLDVIYNNNNEIIQKDLSKGRSFLDEKYVNDDKTVTELLNPSLLMTKPSESFIIDKNIENNNIKEDLSSIDKIRKKQEKKFNEDRANEIAQKAMEEAKKAKEEAERKAKEEAERKAQEEIQRKAKEKVNKREPISKDNVETDLKVDKNVNYKKKIKVELTGYSDKMTASGAIPKIGTIASPPQIPFGTKIYIPGWGTFTTEDRGGAIKIKADGTYKIDIWRATEEEAENVGLVKAEAYILE
