gi|00000000|ref|CP013667.1|  Coxiella burnetii strain 3262, complete genome. 2093477, gc%: 42.94%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(736588..737607)         PROPHAGE_Shewan_MR-1: IS110 family transposase; AUR58_04390; phage(gi24375433)       2.19e-76            MKDIKILGVDIAKDVFQLCGIDEWGKVIYTRRVKRAQYVSTVASLKVGCVVMEACGGANHWYRTFMGMGIPTQLISPQHVKPYVKSNKNDRNDAQAIAEAASRASMRFVRGKTVEQQDVQALLKIRDRLVKSRTALINEIRGLLQEYGLTMARGAKRFYEELPLILASEAVGLTPRMKRVLNCLYTELLNRDEAIGDYEEELKAVAKANEDCQRVQSIPGVGYLTALSVYASVGDIHQFHRSRQLSAFIGLVPRQHSSGNKEVLLGISKRGNVMLRTLLIHGARALLRHVKNKTDKKSLWLKALIERRGMNRACVALANKNARIIWALLTRQETYRCGA
complement(737684..737986)         hypothetical protein; AUR58_04395                                                    N/A                 MDHSTGKRILDEAETLFRYIAVKVETGDLTLLSINDELRQLESLWLGALNELPGNQNSLSNFESEMANYQEEIENYDLLMRYFDTYKQLEEAQNSKAVAQ
738103..738213                     hypothetical protein; AUR58_04400                                                    N/A                 MQRQLKLKEILARILCEEIEQEKGSVYNPTMLAGCD
complement(738337..740433)         PHAGE_Synech_S_CBS3_NC_015465: group 2 RNA polymerase sigma factor; AUR58_04405; phage(gi331028036)     6.25e-35            MPSRKKKSSVTKTKKKTTGKKARVTAKAKPSVKSKLKTVKRAPAKPKSVTVAKTKSKKEKAKVVSQPLPKTAEKKPSAPPSETQQPKIGENAAESQRLGFGALLEEAKNKGYLVHEDLINLLPNDYADPSQMEGIIGRLTEMGIKVFEIPPDADSLLLEEDTQSDDDEINEDVAEVLATETRTTDPVRMYMREMGSVELLTREGEIVIAKRIEEGIRQVMGAVVQYPELIEKFIKEYDTIVATEGRLSDLLIGFFDEEESTASPVAPEARDKEAETSDEDDGGEGGSDEFGESGPDPLITQQHMEELKKLYGRYQNAIKRYGKKAPATLKHQKALAELFSTFKLSIKQFNRLTGQLRRMLRAARAQERLIMSYCVVKAKTPRKKFIASFPHNETNMKWLEQYKNENKEQAKRLEKYSKEIYRAQRNLAQLEEQNNLNIQEIKEINRRVAIGEAKSRRAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQILQETGIEATPEELGRRMDMPEEKVRKVLKIAKEPISMETPIGEDEDSNLGDFIEDINMESPVDFATSAGLMEATREILSTLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRAEKLHSFIEVEE
complement(740553..742214)         PHAGE_Helico_phiHP33_NC_016568: DNA primase; AUR58_04410; phage(gi371671350)         2.34e-41            MNKRIPQSFIQDLLSRTDIVELIQSRVAIKKRGANYLGLCPFHTEKTPSFTVSSSKQFYYCFGCAAHGNAISFLMAFDRMEFLEAVTDLANQLGIEIPHETIGQSKTAEINDDFVLLTTISRFYQRELKRSPTAIHYLKSRGLTGETAKQFAIGYAPNAWENLRPFAKNSKTQSQLVTHGLLVKKENRCFDRFRHRIMFPIRDVRGRVIAFGGRSVGEDLPKYMNSPETPLFQKGNELYGLHEACKTHRPLPRALIVEGYMDVVSLHQHGITYAVATLGTATSVRHLQKLLRYTHEIIYCFDGDDAGRQAAWRALTSALPVMREGIHIRFLFLPQGEDPDSLIQKIGREAFENKIDQAPPLSEVFFSHLQKEIPIRSIDDKAAFAKQALEHLRPMPRGIFYQLLLEELAQRLTLDLSELDSLTVAPPPMPAASTRVPSLAYHALSILAQAPSLVSVIQDMTIPKSEDPQIQFLAKMVLFLKKRPVANTGELLAFCPESQRRLLAQLAAYKTGLSEDDLAAELKDAINRLHEQHQKEEAFQALIKASHKETLDE
complement(742312..742761)         PHAGE_Bacill_G_NC_023719: gp509; AUR58_04415; phage(gi593777964)                     2.04e-12            MTESLKNRIQEDMKAAMRAQEKGRLGTIRLLLAAIKQREIDEQITLDDAGVMKVIEKMIKQRRDSITQYEAGNRPDLAEKEKQEIDVLQAYLPEALSDAEIDIAVKQAIEETGATSMKDMGQLMGVLKGKLQGRVDMSMVSKKVKEHLS
complement(742789..743013)         PHAGE_Pelagi_HTVC008M_NC_020484: 30S ribosomal protein S21; AUR58_04420; phage(gi460042545)     5.80e-05            MPMIDVPDNNAFDVAMRRFKRACEKAGILSKLRQIEYYEKPTSKRKRKRAAAVKRYAKKLQKEQEALERERTRY
743149..744243                     PROPHAGE_Shewan_MR-1: IS110 family transposase; AUR58_04425; phage(gi24375433)       1.07e-74            MDPPLKDGVIMRQHRISIFKKRRRSMKDIKILGVDIAKDVFQLCGIDEWGKVIYTRRVKRAQYVSTVASLKVGCVVMEACGGANHWYRTFMGMGIPTQLISPQHVKPYVKSNKNDRNDAQAIAEAASRASMRFVRGKTVEQQDVQALLKIRDRLVKSRTALINEIRGLLQEYGLTMARGAKRFYEELPLILASEAVGLTPRMKRVLNCLYTELLNRDEAIGDYEEELKAVAKANEDCQRVQSIPGVGYLTALSVYASVGDIHQFHRSRQLSAFIGLVPRQHSSGNKEVLLGISKRGNVMLRTLLIHGARALLRHVKNKTDKKSLWLKALIERRGMNRACVALANKNAPIIWALLTRQETYRCGA

#### region 2 ####
complement(775468..775743)         PHAGE_Shigel_SHSML_52_1_NC_031090: hypothetical protein; AUR58_04610; phage(gi100052)     7.29e-05            MPIYEYQCEKCGEQTEVIQKINDSPVIDCPTCHEPALKRLISPAGFKLEGTGWYVTDFRDKDNKPKPEAASKPEKSKEPKKEVTTKNQESE
complement(775970..777673)         hypothetical protein; AUR58_04615                                                    N/A                 MPSDRNGDSGTLLPLPGLWPTETTPLIERHKAATILDHFYSFLRKLSLPASLIQSLFSNTFFIMEFFKLIELDNPVIEGVAISMFALGTTGSFISTVSPHVTKERHSPHPRVNQFLSDCLYIFDFEIRLQEEVNQNQEIWFYFNDDQLKEDFKKEITDINELRETLKTLVDETYPNHTLAFITQDELEACNNDLPTQQRIYYWKKQPVNTNLTHVFIDIHSHMEGMLGGWPRAIIFRYLQAILPFMSGVLSVNHVLQHFIGGEEDMPLPRYIPMQVFAIAIALFKLSITWERKFKRGEKWWAEFYLRVKLGKSSICEILKICLTSPHNLLALCTYTASMFFFLEKGAIDQILKITCRISTACEHDFNALNPPPLSGCKLPVAYSLTAMSTITLIFTQIITDIDRYLQNQNAASGFCEKVTRLFQCLCRRDQNRETNPETLLEDLSSDSRQTTQKHFKVWVAVIAANTLEGCQQGLGIFTSMLSFLAHVTQQSPNAVLKTVAAVFAAGASLSYWGWLHRQGKDFLTKTAETVNQIKDYLPLSIFSCPSSHDSHEPIVANEAPVNYAPV
complement(777783..778928)         PROPHAGE_Shewan_MR-1: transposase, putative; AUR58_04620; phage(gi24373689)          1.09e-72            MEKTTCKSLKNQYLFHCFLSIKDPRVPGRCIYPLINILLITLCALICGVDTWKGIADFGKKRYRWLSQFVDMRCGVPSALTFARVFSLIEPEQFQHCLSAWMSQFFQLLRFDMIHLDGKSLCGSARRGKAQKATHIVNAYLPKEQVTLGEVRVPDKSNEIKAIPILLNSLNVQGCIISIDAMGTQKGIANLIRLKQADYVLALKKNHTRFYRYVERLFSCSDERDYQGMCYRTEETKDYGHVRIEERSYCVFPMMYLHKYKKYWRDLQAIVRVQSKRHKGNEIETATRYYITSLPFAEHRRMSQAIRQHWAIENQLHWKLDIGLGEDASLITRGYADQNLATLRKMVLKMLENENSSKQGIAGKRIQAALSTRYLRKVVGF
779137..779397                     hypothetical protein; AUR58_04625                                                    N/A                 MLSTISFDEKKAVAFVYPASQFKLATIGALMNYARLMLIGLSASQSHRMNQLNQPQVLPYFHQPSLFRTRLVCLLLLILFFTHGGV
complement(779394..780212)         PROPHAGE_Shewan_MR-1: IS110 family transposase; AUR58_04630; phage(gi24375433)       1.66e-59            MGIPTQLISPQHVKPYVKSNKNDRNDAQAIAEAASRASMRFVRGKTVEQQDVQALLKIRDRLVKSRTALINEIRGLLQEYGLTMARGAKRFYEELPLILASEAVGLTPRMKRVLNCLYTELLNRDEAIGDYEEELKAVAKANEDCQRVQSIPGVGYLTALSVYASVGDIHQFHRSRQLSAFIGLVPRQHSSGNKEVLLGISKRGNVMLRTLLIHGARALLRHVKNKTDKKSLWLKALIERRGMNRACVALANKNAPIIWALLTRQETYRCGA
complement(780191..780412)         PROPHAGE_Shewan_MR-1: IS110 family transposase; AUR58_04635; phage(gi24375433)       1.74e-06            MKDIKILGVDIAKDVFQLCRIDEWGKVIYTRRVKRAQYVSTVASLKVGCVVMEACGGANHWYRTFMGWVSQRS
complement(780593..781798)         PHAGE_Podovi_Lau218_NC_024329: ribonucleotide reductase, small subunit; AUR58_04640; phage(gi971848696)     6.17e-39            MQTHQEISSLLDWDDYNDPEAIKAAPEKKFSPKNEKSDEEETGGGTTVQSGATGLEQLEMGAARIRVDDKKIINCHADLNQLVPFKYTWAWQKYLSGCANHWMPNEINMTADIALWKDPNGLTADERTIVKRSLGFFSTADSLVANNLVLAIYRHITNPECRQYLLRQAFEEALHTHAYQYIIESLGLDEAEVFNMYRELPAVSKKAVWALPYTQSLADPNFKTGTPEDDRRLLRDLIAFYVVFEGLFFYVGFTQILAMGRRGKMTGTSEQFQYILRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYAKDTMPRGILGLNANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFFETRVIEYQAGGTLKWDE
complement(781848..784673)         PHAGE_Cellul_phiST_NC_020842: ribonucleoside-diphosphate reductase large subunit; AUR58_04645; phage(gi472339895)     8.29e-141           MEINVKENRSTLGGGNSDGNLLEAIQPGQLRVVKRDGRVVKYDANRITIAMKKAFLAVEGETAAESGRVQEIVSRLTDQITDLFHKRWPSGGAVHIETIQDKVELALMYAGLHKAARAYVLYREERRKQREEQKASEAENTIHITLDDGATILLDQSWLARMVHSACSDLEGVDAVKILEETKNNLFDGVALKDVYKGLVMTARTLVENEPNYTYVTARLLLHDLYREVLNGLNLPQDLMHEDIAHYYPEAFKNFIRHGIETEHLHPNLQTFDLNYLAQALKPERDQQFTYLSLQTLYDRYLIHHQQVRIELPQVFFMRVAMGLAQSEGEARNQRAVEFYNVLSSFDFMSSTPTLFNSGTVFPQLSSCFLTTVPDSLDGIYGALKDNALLSKYAGGLGNDWTPVRAMGAYIKGTNGKSLGVVPFLNVADATAIAVNQGGKRKGAVCAYLETWHMDIEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVFEDGQWTLFSPDEVPDLHDKFGEAFEIAYVAYEEKAHRGEIRSKTISALSLWRKILSMLFETGHPWVTFKDACNIRSPQQHVGVIHSSNLCTEITLNTSREEIAVCNLGSINLVNHMKDGKLDTEKLARTTKTAIRMLDNVIDINYYSVPQARTSNLKHRPIGLGLMGFQDALYLQNIPYASEAAVQFADQSMETISYYAIQASMELAKERGPYETFNNSLWSQGILPIDSIQLLKKSRGKYFEQNTDQTLDWNALRKQVVAHGMRNSNVMAIAPTATISNICGISQSIEPTYQNLFVKSNLSGEFTVINPYLVRELKSRQLWDNVMVHDLKYYNGSVQKIDRIPAELKKLYATAFEVEPRWLVEAASRRQKWIDQAQSLNLYMAEPSGKKLDVLYRMAWLRGLKTTYYLRSMGATGTEKATIHDTTLNAVTGQNNPNACAIDDPDCEACQ
complement(784695..784796)         hypothetical protein; AUR58_04650                                                    N/A                 MFNNLKNAYILWLKEDPIGEAVKPKINYLPPNQ
784849..784959                     hypothetical protein; AUR58_04655                                                    N/A                 MDKMGIYSYPQVTTLSILGFVIYAWEFRRAFSALRT
785046..785555                     PHAGE_Entero_JS10_NC_012741: NudE nudix hydrolase; AUR58_04660; phage(gi238695271)     3.57e-06            MKQWVKMMNDIVIDKRGFRLGVGMVIMNRQGELLWGRRVGNPDAWQFPQGGLLPNETLREALNRELDEEVGLSPHDVIYLRETRQWISYRLPKKFRRPEHRGPVCIGQRQKWFLLQFTGKDDAISLDHCSQPEFDQWRWVDYWYPVDHVVEFKRDVYQKVITEFAEFIR

#### region 3 ####
complement(1265070..1265654)       PHAGE_Caulob_Cr30_NC_025422: phosphoheptose isomerase; AUR58_07275; phage(gi725949171)     4.58e-07            MSHAKLFFDQVKEVANQINYQKIENLATHFADIRNRNGRLFILGVGGSAANASHAVNDFRKLCGIETYSPSDNISELTARTNDEGWETVFSGWLKTSRLKENDAVLVLSVGGGNKEKNVSVNLIRALDYAKECNAKIYGIVSRDGGYTAKMADEFIIIPSVDDKHITPHAEAFQAVIWHCLVSHPQLQTQATKW
complement(1265664..1266407)       PHAGE_Synech_metaG_MbCM1_NC_019443: TalC transaldolase-like protein; AUR58_07280; phage(gi418487351)     1.19e-16            MENDHLQELKVKIFADGANLEEMVKFSTHPYIKGFTTNPTLMRQAGIVDYEAFAHQALAQITKLPISFEVFADELDEMEDQARYIASWGNNVNIKIPVTNTKGQFTGPIIQRLSEDGITLNITALTTHSQVEKVCQSFADDTPGIVSVFAGRVADSGRDPEDHMRKALEIVAQKPSLELLWASPRELFNIIQANRIGCHIITVAHNILAKLPLLGKDLTQYSLETVQMFARDAQASRYSIHCSSAVL
1266587..1267600                   PHAGE_Synech_S_SKS1_NC_020851: nucleotide-sugar epimerase; AUR58_07285; phage(gi472340882)     3.07e-19            MTKRFDRILVTGGAGYVGSALVPQLLELGYRVTVYDTLFFGDDFLPKENPYLNIVEGDIRDTERLKQCFKDADAVISLACISNDASFELDETLSTSINLEAFEPMVKAAKAAGVKRFIYASSSSVYGVSETKDVTEEHPLVPLTLYNKYKGMCEPLLFKHQSPEFVCVTIRPATLCGYAPRQRLDLSVNILTNHAVNNNKITVFGGSQLRPNLHVQDMCDLYKLLLVVPDEKIAGETFNVGYENKSIMEIAHIVKNIVEEEFPEKAPIDIVTAPTDDIRSYHINSDKIKRCLGFEAKYSIEDAVRDLCKAFKAGKLPDSMTNNRYFNVRCIKALEVV
1267600..1268634                   PHAGE_Prochl_P_SSM2_NC_006883: nucleotide sugar epimerase; AUR58_07290; phage(gi61806141)     1.48e-67            MRKPIAIVTGGAGFIGSHMVDLLLDCGFQVRVIDNLKGGHRRNLEHRANNPDLTFEIKDICELSAPHPLFENVDYVFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLECARAANVKKLVYAASSSCYGLADVPTREDHPIAPQYPYALSKYLGEEAAFHWFQVYGLPVNSIRIFNAYGTRVRTTGVYGAVFGVFFKQKLADKPFTVVGDGTQRRDFLYVTDVARAFLKAAETRKVGETWNLGAGNPQSINRLVELIGGEVEYIPKRPGEPDCTWADISKIKRDLGWEPTITFADGVSRMMSEIGVWHDAPLWNKESIANATATWFKYLGKNKKEKADVAETIPS
1268609..1270189                   PHAGE_Prochl_P_TIM68_NC_028955: putative nucleotidyltransferase; AUR58_07295; phage(gi971760366)     4.39e-08            MLLKRYRHKIKTLEELCEIVGQFPREKTVVMCHGVFDVVHPGHLRHLLYAKSKADILVASLTSDRHIVKGHYRPHIPQDLRAANLAAFEMVDYVLIDKYPTPLQTIQALQPDLFAKGFEYISGGLHPKTAEEEELLKAYGGKMLFTPGDIIYSSSALINMNEPDVRHEKLATLLEYHQVSFADIERALDEMKDIRVHVVGDTIIDGFNYTSMIGGQTKTPTISVRHESQKDYVGGAAIVAQHLRAAGAQVTFTTLLGADDRKDFTLNVLSKNEIKVNAIIDENRPTTYKNAIIADGYRLIKVDTLDNSSINDDCLAQFEKAIDSTDCDVVICSDFRHGIFNRRTIDRLLSVIPPQVFKVADSQVASRWGNITEFRNFDLITPNEREARFALADQDSGIRPLASKLYDIANCKTLILKLGEKGILTYYDSDHEALDSFFVVSSFVDRVVDCVGAGDALLAYATLALVKGASPVIASILGAVAAACECEMEGNQPVTPDNVREKLLKLKTCLDSSDFQSIKENETLVT
1270192..1271136                   oxidoreductase; AUR58_07300                                                          N/A                 MKTLVVGLGVQGKKRRFFAGNDYVGSVDPINHEADYAGIHEVPLSDYEAALVCLPDEPKYEVIRYLLSHDKHVLVEKPLWTPERKQLFELQKLAQEHNVVLYTAYNHRFEPHIKSISELLKENVLGEVYRCRLFYGNGTAKLVRDSGWRDAGGGVLTDLCCHLLDFVDYWFGLRDSNYVCIDAQCHENNAPDHVVILNRVAKIKIEFEMSLLSWRNSFYCDIIGEKGSLHIDSLCKWGPSQLIFRQRALPSGRPIEKTTTLIQSDPTWELEYRYFKSLIEAKQATNLEKDIWIYDQLNGLTQAALKEIDLCTVQ
1271121..1272431                   PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; AUR58_07305; phage(gi971760353)     1.02e-08            MHGTVVVGFYGMTHLGLVSAVAAASKGYQVIGYDPNEMLIAELKQKKYPIEEPQFPELMVDNADRLRFTAELDQLLAAELIYVAIDVPTDAENHSDLQPIRYALEQLQRRLRREQIVVVLSQVQPGFIRAAEFPAEQLFYQVETLIFGRAIERATKPERFIVGCPDPTKNLPSCYHTFLKSFHCPILTMRYESAELAKISINMYLVAAVMTSNLLAELASAVGADWQEVVPTLRLDKRIGQYAYLEPGLGISGGNLERDMVTIKQLAQQYSTHAELVKTWLADSPYYKNWVWRCLQTEILSKTEAPIVAILGLAYKTNTHSIKNSPSMALINLLKTTKSQIQVHDPAVKKEDREDTATHCDSALKALQSADVLVIMTPWLDYSKLTANDFLAHMRGRVIIDPYRVLNYEALIQAGFYVHTLGVNSNALKKKEAAYA
1272424..1273329                   PHAGE_Prochl_P_TIM68_NC_028955: putative NAD-dependent epimerase; AUR58_07310; phage(gi971760350)     2.02e-08            MLEHLQDAGTPSRVVVLGANGFVGRALCQRLKQEAVNVLELTRQQVDLLNPDATEQLLKQLQASDTLVITAAEAPCKNAAMLYRNVRMMNVVCEVLQKQAIQQVIYISSDAVYADSDQPLTETSVTAPTSLHGVMHLAREMMLQSVCSENNISLAILRPSLLYGAEDPHNGYGPNRFRRLADNHESIILFGEGEEQRDHVYIDDVAEIITRVIQRCSRGVLNIATGQVISFKQLAEKVVQLSNNEVAIQPSPRQGSMPHNGYRPFDITDCQKAFPDFSYTSIEDGLQYSQLKMKVFKKEVL
