gi|00000000|ref|CP013676.1|  Xanthomonas oryzae pv. oryzae strain PXO282, complete genome. 4961996, gc%: 63.69%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
605215..605226                     attL                                                                                 N/A                 CGCCGCCGCGGT
610750..610761                     attL                                                                                 N/A                 CTGGGCCCACCA
610836..611930                     PHAGE_Pseudo_PAJU2_NC_011373: putative integrase; ATY46_02805; phage(gi209552450)     5.89e-40            MATIVKTPSGTWKALVRKTGWPATAKTFRTKRDAEDWARRTEDEMVRGVYIQRAPSERMTIEDALKRYLSEISPTKRPASADSDARHAKPLMQNLGKYSLAALTPELIAKYRDDRLAGLDRKDAKGKPAPKPRSPNTVRLDLALLGHLFNVAIKEWGIGLTYNPVQSIRRPAPSPGRDRRLTREEETRLMAAVDAHSNPMLGWIVRIALETGMRSSEITGLRRNQVDLDRRVVRLQETKNTMSRTVPLTVEATRLFREALNNPVRPIDTNLIFFGEPGRDNKRRAYQFNPIWTRIKKDAGVPDFRFHDLRHEAVSRFVEAGLSDQEVAAISGHKSMQMLKRYTHLRAEDLVGKLDQVVKKTGNP
612169..612408                     plasmid-related protein; ATY46_02810                                                 N/A                 MTTEEYLLQRYGPLMSLGDVAGLLGRSPDGIRVALYSDTDVARKLKPTMLRVGRRVYFRTLQVKDALALDSSAQGALAR
612823..613254                     hypothetical protein; ATY46_02815                                                    N/A                 MVTTTTGESYPHAAPSPVPGEAEKGACGALVWPSRLNERERSAIASMVSGLDANDAQMLLDELAGVMATQSIKTSPERWFRAVLDRFHQGRFAPSAGLAAKEKRLRIQSTPAETPVQTASPEVIRHHLERIQTMLGRKGATVE
613251..613535                     hypothetical protein; ATY46_02820                                                    N/A                 MTTRPQSRRPTATLRYGDLDAYCDSLERTGLVRVILKANRRHGYALSVENAGDFRRVVDGHGRQLWFRTVDQALEELANIPYLSEEFSIDRTDW
613887..614606                     type IV secretion system protein VirB5; ATY46_02825                                  N/A                 MQSLKTLAVITVACSVFLSNSTYAQIPVTDGASIAQQVAAQVETIAKWKMQYDQMTSQINQMKQQYESLTGSRNLGQILNNAALRDYLPNDWQGVYDAVKSGGYSGLSGRALSIYEGNKAFDACAHFKVADQRTACEAQAVKGAQDKAFALDAYDKAKSRLTQIDQLMAKINDTPDPKAIAELQGRIAVEQAMIQNEQTKLQMYQMVAAAEDRLQEQRQRELNAKAGARRGWIQPQVTN
614620..615099                     hypothetical protein; ATY46_02830                                                    N/A                 MISYFHAPLVALCFFILLAMWRFWSCIDRMGFMREVSRRAPSMLHGDLVAGILAFMPFLLALVDWAGITLPRQDGPISPYASVFLSLGCLLGCMFMLRQSGERFAGHWAGTRESALRTVAALRIIDAAELAHALDVAQQHEARQGSGRVIDAETREVRK
615096..615356                     conjugal transfer protein TraG; ATY46_02835                                          N/A                 MKKLALSLVVAAVLAGCGENTPVQTVDWYKAHDAERKDMIAKCKSNPGELAASPNCINAQQAQNEKDLSRRGYLKLPPVDLNKRGE
615358..616443                     conjugal transfer protein TraH; ATY46_02840                                          N/A                 MDPMIFQFIGQYLDAALNPFITGTVGEVISTFTLFFIGGATIHLTLMGYAIGWGYVELPFSTFMKTCVKYLFIGALALNAATYSDWVVGSIQSLETGFTSAFAGTGDGSSPTSVYSVVDAALGKGWGIAADLWEKAGNRGITEMGTMFGEYINATIIAVATGLIGVPAGGMIVVAKAALTIMLGIGPVFVALLLWPATSKFFDSWFGQVMTYILRIALVAAVMGLAFKGFDAVINSVDLDSDQNTLFTSLVLITFTLVMFWLLAEANNVAGQLAGGISSAAVTLRGMAQGAMAPASTAVRIINPTSTRLDPRTGHQTTSSRLEHLAMGRSVFAKNPAYRDGLKERLQQAWSKPDGGTMKKG
616450..616752                     hypothetical protein; ATY46_02845                                                    N/A                 MFSQLEHEALMRLMTHATGYVPDSRRIAHWLQEWEQSSNPRGIKAKVPGLAFDHARDVQTVAHAAKRTGAKPSTLGRLEYRYNMESIARAYPLPVMEYER
617556..618137                     hypothetical protein; ATY46_02850                                                    N/A                 MPRKAEIGATRDSHIYRVRVPAGLQAQWEEWCAKSDKKPSEVIRALMRYLVQDNIPNEVRNWVAAQAAGHPDDGPKERVEVRLTPTEYQSITTKADAEGCSPHRWIVNCVRASLTHEPQFTMETTKALWESSYQLRAIGRNLNQIAKRLNEGKPAGIKTEQMEKLATYIYRHTDKVAAVQDASLSRWMLNIATN
619981..620778                     endonuclease; ATY46_02860                                                            N/A                 MNDTTKAPSRYHQLIEKIFFDGYSEGITEIPFERKALKEAAQELDIALPDNLGDVIYSIRFRTPMPAKVLATQPVGREWIIELVGRAKYRFRLATANRIVPNPNLAVIRIPDNTPEIIGAYALDDEQALLAKVRYNRLIDIFLGLTTFSLQNHLRTSVKGVGQIEIDELYVGLDKYGCHYVIPVQAKGGSDQISAVQTAQDTAWCTQKYPTLRCRAISAQFVSSDQIALFELKMDDDELKVVEERHYKLVPAGELDRKEIVDYRS
620902..620968                     tRNA                                                                                 N/A                 GGCATAGCACGTTGGCGACGAACTCATAATCCTTTGGTTGAAGGTTCGAATCCTTCTGGGCCCACCA
620957..620968                     attR                                                                                 N/A                 CTGGGCCCACCA
complement(621038..622312)         PHAGE_Stenot_Smp131_NC_023588: phage integrase; ATY46_02865; phage(gi589892030)      4.76e-135           MDNVGCDKRISWPCHCSKSRTAPRRGSHLMARGRKRRFNPNIPGHIEQEALPKGIYWENGRWYMHEDHPDGGRQVKRTVAFRSARLSELHAIAESRLRGDVRGTLRYLFDRFHEASEFKELQHDTQKDYRRYADTLANYVRKDGSKLGGVQLEHITTPVVQRLLETFANGRPATRLQQALPPTPSKANHLYRYLRRTLAWGVRHGYCKENPAIGVLQAKEAKAFRMPTPDAFEAVLQFARERGALKPHTKGSFPSYLPPVMVLAYSARLRGIEVCSLTDAHRLEHGVHASRRKGSRDTLTTWDAHMTEAWEALLARRSEICNKPGRNFPIPMKPEERFFLIEQTGNPIVKSSLDSAWQRFIPAAIRDGVIKSEERFSLHGLKHRGVTDTEGNRGDKQDAAGHVSSSMTDRYDHELPVVKPPRRR
complement(622225..622449)         PHAGE_Stenot_Smp131_NC_023588: hypothetical protein; ATY46_02870; phage(gi589892029)     4.96e-20            MTERILHFEDLQRIYAPDGPRPQVASVVRWADRTGIRYQYDRRGRIWTTLDAINASLGLVTAANQEQHQDEDLI
complement(622446..622652)         hypothetical protein; ATY46_02875                                                    N/A                 MSDEAMEVHRLQCEARHWLQQGYTDARSVSLLQQMIAAKRGAQAAQDLRDEMRQQWKTRRQWQQEQLL
complement(622649..622921)         hypothetical protein; ATY46_02880                                                    N/A                 MTQREISHPEPLPAYRDGHAGRHIADGRRLQAGGGHVIECPCGRTKKHAAFDQALAEWKRMHRIRVPRQAAPADSNVVQLGLRLRGGTSQ
complement(622918..623163)         hypothetical protein; ATY46_02885                                                    N/A                 MNLDRVIAVSRAAQAYDDPGPLSTGEALTAALVLNRHDWLADMDYTIAQALDRIDEDSIAHLRQAERAIGNGAGATEENPA
complement(625099..626334)         PHAGE_Ralsto_RSA1_NC_009382: transposase IRSO15-like; ATY46_02900; phage(gi145708108)     9.94e-25            MTAKVFEAALGIGAPWSVGAVEFDEATKVLTVPVDFKPGTRFKVSGQKGLHPVHDTVVKTYRHLNFFQHECYLKVRTPRVKLGDGSVRLVEPDFAGRLSGFTLLFEALVLMLSQQMPFAAVARIVGESAYRCMQVCNRYVEMALERADFSDVTSLAIDETSRARGHDYVTLAADAQARRVIFVTEGRDAKAVKALADDLAAHGCPPEQITSVSIDMSPAFIKGVSDQLPNAQITFDKFHVVGHTNAAVDKTRRIEQRTEKSLKGMRWTLLKDVFSLKPTAGAALHGLITAPKLTRTARAWLYKEQLREALDRKQINVMREMLKHWCVCVMRSKVEAMKEVAALVRRHMDGIVAWAQTRQTNGFLEAINGLFQSAKRRARGFKRLSTIKTVIFLIAGKLDFQTFNPHARQPT
626403..626792                     hypothetical protein; ATY46_02905                                                    N/A                 MEGLGLAAPGIYGSVSTLIAALGGMVALAEKMGPRVTIIEVAKAGTKTEMFAVLSAVSASIYLGAAVGSAAVASGRTLSCGTSLSDVLAYSSRNGLSSDSVRTVLITRREIYDYKRPGRRYYASLAAAV
626789..626992                     hypothetical protein; ATY46_02910                                                    N/A                 MSGRIKDRLLLLVTAFVASVLGWAFWHYVGEAAVWVWVGMLILSLVLLRKGGKREADEQPPDDTVSR
complement(627115..628131)         PROPHAGE_Xantho_33913: IS1595 transposase; ATY46_02915; phage(gi21231554)            1.41e-124           MRADRSMVGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQALEISRWPQGFVCPRCAATAHSRFQRHGTTYWQCTACYRQTSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMRHLGVSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYLGGERNGGKAGRGSENKRPFVIAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEAEHAHTVIEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTRLVPSLLAAAAASKPWSERALRDVTMFTAESAC
complement(628303..628752)         PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; ATY46_02920; phage(gi588498272)     3.69e-15            MHMSKSYQHLSAEERAMLQIERGRGQSVRAISRILGRSPSTLSRELAKQDSTTYCARSAGKRYRARRQLSVRQRRLTPGTPLFQLVRDHLVLWRWSPQQIAAKLSHMYPDDPAQRVSHETIYASIYAHPRGGLKKELVQALRQHKPKRG
628901..629089                     PROPHAGE_Xantho_33913: IS1404 transposase; ATY46_02925; phage(gi21232569)            8.94e-29            MERAISGHGNEHWFPTLLHARTEIERWRREYNQHRPKKAIGAMTPAAYAQQLANSDIINPGL
629319..630041                     PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; ATY46_02930; phage(gi371496158)      1.57e-18            MTPAISICDLHVGYRGRAVLQGLTLDVAPGTVYALLGGNGAGKSSTLSTLLGFVKPTSGSLRVDGVDPVADPGKARARLAYLPENVALYEHLSALENADYLLALAGQRRSQATIGEAFAAAGLQRDAWAQRLAGFSKGMRQKVAIAVATLRQVPVLLLDEPTSGLDPRAIADFNRLVSSVRERGGAVLMVTHDLLGAVDVADRLGFLENGRIADDIGAGDSGFDVRTLHARFARPQDEAA
630052..631488                     ABC transporter permease; ATY46_02935                                                N/A                 MSPVLLVAREELRYMARNRSAAIGVVLLMLLTLVAALTAAHHQCEVADFRARQQQAAQQAFEAQPDRHPHRMVHYGHFIYRRLPALAAFDSGVDAFTGNSMFLEGHRQNTANFGDVRQSSLLVRFGQLTPAFVLQVLAPLLLVFLGYGAVAREQETGTLRALLLQGATRRQLLGGKYLALAAVAGACLLPALVCLAPIALLPGHAVLVALLVLAYSVYLLVWCALVLAISMLCRRGRDALLVQLAVWVWLALLVPRVAPDVASAAYRLPTRLETDVAIQRDLRTVGDSHNPDDPHFAQFKQQTLARYGVQRVEDLPVNYKGLLALEGERLTASLFERYAGRDASIQQQQNLLVRAFVLLSPTVALREVSMTLAETDLRAHLRFLAQAEHYRYTLVQHLNQLQTDAVSMADDTAQDAGADRRKRISSEHWHEIPVFAFQPATTTEVIGTAGAALGLIGAWLLAALCMLVAAGRRVGVVR
631488..632756                     ABC transporter permease; ATY46_02940                                                N/A                 MVLWKYELLLLLRARAALAGLLLLAMLTVCSLLSGQYVIAAQRDNIAKIAALQREDSAAVEDYVARSNDAGSAAYYSSYPTWDRPSPLAFAAVGMRDVSPYILRVRALGLEAQIHDGDSYNPELALAGRFDYAFVLVFLLPLFVIALLFDLRSGEREAGRARMLAALPGARTALLVRRVVVRAAAVLLCVSVPFVIFATLNAVPLLQQLAVLALGAGYLLFWVMLAVLVGRIQWRPAAHATALATCWVMLALVAPALAHVAINQTVPVNQGTEIARLQREAVNHAWDIPRQDTMRAFYARNPQWADSAPLTTAFHYKWYFAFHENGDQQVAPQVAAYRNGLQRREALAQRVASVLPPVALQAALTRLADTDLQAQLAYQDRIRAYHRALRTFYYGYLFRDRPFTRDDFGRAPRFDATADPAS
632846..634987                     PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; ATY46_02945; phage(gi100064)      8.07e-07            MPVFSRRRMRHTLPLLSLLAWACSIACAQADALRARELDAVQVRSQYTPYRELSITGATKTDAPLRDLPISARVLDRTLLDDAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDPNFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALYGRGEPGGVVNIITKKPLFQPQNSVDVSAGRFDSYRAAIDSTGPLSESVAYRLNVMHKDQHSFRDTVDSDNTLLAPSLLWMPTPETTVSYELEAVRIHAPFDRGVTAIDGDANRLPASRFLGEPRDGDIDLHSTGHQLFVVHGLNQTWSLQGGATYRESGMRGFSTEPWTLQADQRTLRRERRYRDYQGRDIAARAELLGSLQAGRVTHNVLLGIDGNRFDDSRFQQRARSAATPYSIDVLAPRYGVAQPGQLAAITDTEERQQVWGAYAQDQIDLGARWKALLGLRYDHYEQDLDNHLRGTTQRASDGVVSPRAGLTFLVDDALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLETGLKYVQPGDGLEATVAAFRIDKKNVLSLDPADTSFSLPVGEMRSQGVELDLLGRLTPHLAASVGLAYTDPQVTRSSAAAAGTGLAEGRRFPNVSRFSGNAFLNYEQPLTGKRSAAIGMGVSHTGERLGSVDSNTDFVLPAYTVWRVVGHYDLSDRLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGVHLRF
641590..641601                     attR                                                                                 N/A                 CGCCGCCGCGGT

#### region 2 ####
992217..992690                     PROPHAGE_Xantho_33913: IS1478 transposase; ATY46_04555; phage(gi77747808)            9.95e-75            LQGFICVFGVLELPVFVTLRPGFWQFSPMRTRRPAAEQLPADELFRSRLENQIDLRHPLVQLSHRLPWSALEQALSPRLPATTGTGGRPALPVRLIAGLLYLKHAYDLSDEAVCERWLENPYWQFFTGEVVFQTCLPCDPSSLTRWRQRLGEAGLEAL
992754..993017                     PROPHAGE_Xantho_33913: IS1404 transposase; ATY46_04560; phage(gi21232568)            2.19e-51            MKKRFSEEQIIGFLREAEAGMPIKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDLEAENTRLKKLLAEQVFQNDLIKDALQKQW
993011..993856                     PROPHAGE_Xantho_33913: IS1404 transposase; ATY46_04565; phage(gi21232569)            2.59e-175           MVSAPARRALVREWIEGGASERCALAAIGMSASALRYRPREDRNVELRERILALAHRHRRYGVGMISLKLRQEGRLVNYKRVERLYCEQQLQVRRRTRKKVPLGERAPLLRPTKANPVWSMDVVFDRTAEGRAIKSLVIVDDATHQAVAIDVERAISGHRVARVLDRLAHSGGLPQVIRTDNGKEFCGKAMVAWAHANRVQLRQIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYNQHRPKKAIGAMTPATYAQQLANSDIINPGL
993890..994309                     PROPHAGE_Xantho_33913: IS1478 transposase; ATY46_04570; phage(gi77747808)            2.81e-73            AHTINTAHAMKAVDPRELSRVIVDTTVQEKAIAHPTESRLLEVARKKLVLLAKRHGIALRQSDARQGPALRRKAGRHAHARQFKRMRKVLRRQRTILGRVLRDLQRKLAQQEPTVRERIGIWLERAHRLLAQRPKDKQKL
994371..995606                     PHAGE_Ralsto_RSA1_NC_009382: transposase IRSO15-like; ATY46_04575; phage(gi145708108)     1.50e-24            MTAKVFEAALGIGAPWSVGAVEFDEATKVLTVPVDFKPGTRFKVSGQKGLHPVHDTVVKTYRHLNFFQHECYLKVRTPRVKLGDGSVRLVEPDFAGRLSGFTLLFEALVLMLSQQMPFAAVARIVGESAYRCMQVCNRYVEMALEQADFSDVTSLAIDETSRARGHDYVTLAADAQARRVIFVTEGRDAKAVKALAADLAAHGCPPEQITSVSIDMSPAFIKGVSDQLPNAQITFDKFHVVGHANAAVDKTRRIEQRTEKSLKGMRWTLLKDVFSLKPTAGAALHGLITAPKLTRTARAWLYKEQLREALDRKQINVMRERLKHWCVCVMRSKVEAMKEVAALVRRHMDGIVAWAQTRQTNGFLEAINGLFQSAKRRARGFKRLSTIKTVIFLIAGKLDFQTFNPHARQPT
995603..996193                     PROPHAGE_Xantho_33913: IS1478 transposase; ATY46_04580; phage(gi77747808)            4.50e-101           MKFKRAQKLYALHAPEVECMSKGKARQPYEFGVKVGIAVSARKGLIVGARSFPGNPYDGDTLAEQLEQARGLLQDVDVIPQVAIVDLGYRGRDVEGVQILHRGKAKTLTRRQWRWIKRRQAVEPVIGHLKQDCRLNRCHLKGAQGDALHVLGCAAGDNLRWRLRWIACLRAWLQVVRARSSMSSSTMWPANMALEV
complement(996220..997110)         hypothetical protein; ATY46_04585                                                    N/A                 MKTLQLQKGAACLAIAIATTLACSAAMAQVDPRNPERDALPVISGSKVGVNTGSCTAGAVVVPRNFLWRLTPYQNATRWLVLAKHCSLLGGTVYSRELPIGIVEWQSAASDLELVRVPPEPNPAYTWCQAHQNSGAAICNPYLQYRPRAHNRVFMPRGGREARVPVAGWSNAPDGQFCTSGWRTGVRCVWRGMSLGPGIAQPNYDHISAADGSEFVSLDGGDSGGPVVTYDMHLIGIISSSDERTRSILFYTPMSQVLQELHDYTLAPINTSDENTGWELAPADDDAGATQRQDHG
complement(997595..998146)         PROPHAGE_Xantho_33913: IS1404 transposase; ATY46_04590; phage(gi21232569)            3.06e-122           KKVPVGERAPLLRPTKANQVWSMDVVFDRTTEGRAIKCLVIVDDATHEAVAIDVERAISGHGVVRVLDRLAHSRGLPKVIRTDNGKEFCGKAMVAWAHANGVQLRQIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYNEHRPKKTIGGMTPAAYAQQLANSDIINPGL
complement(998726..999541)         PROPHAGE_Xantho_33913: IS1595 transposase; ATY46_04600; phage(gi21231554)            1.42e-106           MVGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQALEISRWPQGFVCPRCAATAHSRFQRHGTTYWQCTACYRQTSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMRHLGVSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYLGGERNGGKAGRGSENKRPFVIAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEAEHAHTVIEGSGRSRCEAENARWVNVVLSNLKRSLDGA
999719..1000033                    transposase; ATY46_04605                                                             N/A                 MAKQDSTTYCARSAGKRYRARRQLSVRQRRLTPGTPLFQLVRDHLVLWRWSPQQIAAKLSHMYPDDPAQRVSHETIYASIYAHPRGGLKKELVQALRQHKPKRG
1000172..1000606                   PROPHAGE_Escher_CFT073: transposase insI; ATY46_04610; phage(gi26250328)             1.57e-35            MGTLVERKTRFVVLCRMDGCTAADALEGFTRQMKKLPASMRTSLTYDRGTELTCYAELMQGSNIDVWFADPHAPWQRGSNENTNGLLRQFLPKGADLSTVSQEYLNHIALLMNTRPRQTLGWKTPSEAMEEEIAALKSRVALES
1000603..1000896                   hypothetical protein; ATY46_04615                                                    N/A                 MRLPTLHVAPAIPQIHDRHLRDHIHILQQPARLFQLLGQRIAVVGMTGKTARAHDQALARTHRNADLDATFVGAACLALAHAFHFRRVQGVEFLWLS
complement(1000900..1002135)       PHAGE_Ralsto_RSA1_NC_009382: transposase IRSO15-like; ATY46_04620; phage(gi145708108)     1.23e-24            MTAKVFEAALGIGAPWSVGAVEFDEATKVLTVPVDFKPGTRFKVSGQKGLHPVHDTVVKTYRHLNFFQHECYLKVRTPRVKLGDGSVRLVEPDFAGRLSGFTLLFEALVLMLSQQMPFAAVARIVGESAYRCMQVCNRYVEMALEQADFSDVSSLAIDETSRARGHDYVTLAADAQARRVIFVTEGRDAKAVKALAADLAAHGCPPEQITSVSIDMSPAFIKGVSDQLPNAQITFDKFHVVGHANAAVDKTRRIEQRTEKSLKGMRWTLLKDVFSLKPTAGAALHGLITAPKLTRTARAWLYKEQLREALDRKQINVMRERLKHWCVCVMRSKVEAMKEVAALVRRHMDGIVAWAQTRQTNGFLEAINGLFQSAKRRARGFKRLSTIKTVIFLIAGKLDFQTFNPHARQPT
complement(1002184..1003008)       PROPHAGE_Xantho_33913: IS1478 transposase; ATY46_04625; phage(gi77747808)            9.55e-160           MRTRRPAAEQLHADELFRSRLENQIDLRHPLVQLSHRLPWSALEQALSPQLPATTSTGGRPALPMRLIAGLFYLKHAYHLSDEAVCERWLKNPYWQFFTGEVVFQTCLPCDPSSLTRWRQRLGEAGMEALLAHTIHTAHAMKAVDARELSRVIVDTTVQEKAIAHPTDSRLLEVARKKLVLLAKRHGIVLRQTYVRQGPGLSRKAGRHAHARQFKRMRKVLRRQRTILGRVSRDLQRKLDQLEPSVRERIGVWLERAHRLLAQRPKDKQKRLSEN
complement(1003118..1004329)       PROPHAGE_Mesorh_MAFF303099: transposase; ATY46_04630; phage(gi13475318)              2.99e-85            MLLPGGRKSVEPMAARVHPQNVRSAHQSMHHLVADADWSDQALLAAVAAQVLPTLSRKSAACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKTALAMDQIDSALATGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQPAPMPPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTLPKQTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRPRGSGPNATSPSQLDCHAGLRTG
complement(1004554..1004901)       PROPHAGE_Xantho_33913: IS1404 transposase; ATY46_04635; phage(gi21232569)            9.52e-49            MVSAPARRALVREWIAGGASERCALAAIGMSASALRYCPREDRNVELREHSVALAHRHRRYGVGMISLKLRQEGRLVNDKGVERLYRQQQLQVRRRKRKKSPPEKPPDRIHCKASP
complement(1004895..1005158)       PROPHAGE_Xantho_33913: IS1404 transposase; ATY46_04640; phage(gi21232568)            7.31e-52            MKKRFSEEQIIGFLREAEAGMAIKDMCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDLEAENTRLKKLLAEQVFQNDLIKDALQKQW
1005132..1006106                   PROPHAGE_Neisse_MC58: IS30 family transposase; ATY46_04645; phage(gi15677611)        1.24e-55            MLFGKTLLHVQSPRDRTIPLHALYETGMSMRAIADVLARAPSTISRELRRNQHAARYQPDHAQRISAHRRAQASRRPRINAERIRQIEVLLREDVSPEQIAGRTGLASHEWIYRHIYADQKRGGQLFMHLRKRRRKRRRRGVRDGRGQLTHRRSWTQRPSVVEQRSRIGDWELETIRASHGRAVVVSMTERRSRLHLLAYSPDGTAENVRNAIVQRLGGLRHAVHTLTADNGKEFADHRLIAACLQSDFYFADPYCPWQRGSNENANGLTRQYLPRQADVSTITDAHLRWIEQRLYNRPRKILGFKTPLEVFSEEVLNSVANQS
1007136..1008134                   PROPHAGE_Xantho_33913: IS1595 transposase; ATY46_04655; phage(gi21231554)            7.18e-124           MVGPWLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQVLEISRWPQGFVCPRCAATAHSRFQRHGTTYWQCTACYRQTSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMRHLGVSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYLGGERNGGKAGRGSENKRPFVIAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEAEHAHTVIEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTRLVPSLLAAAAASKPWSERALRDVTMFTAESAC
1008436..1010013                   chlamydia polymorphic membrane family protein; ATY46_04660                           N/A                 MRSTLHASVVTAGLCALVTTSAAIAAVPSVAQCLTPQPWAHSNAGVVVGNGTAASCTASALATAVAQGGYVTFNCGASAVSIAVNQTINISASTPTVIDGQGKITLDGGQVARIFQVQNGNALSVRNLKLQNGSSVQPASNTQYAPGTWGGGAIKVSYRGKLEVINSQFLSNRSSIGGGAIFAGSDADVTIVKSSFSKNTSWLGGALYTQLSRLTIVNSEFVGNQAINAPAGFPDADQFGNSGAIDTDGASLAGYLNAAAGGATLSVCGTVVRNNTAANSGGGATLWAYAPDTIDVRYSTFANNIAYGGPAGGARISLGFGDTTHSGTTITTPGIINVEETSFLSNRAEKSNAGALYMDCYGPSCNVSNSTFYGNYAKGVGAAIQHVGWQPSNGDQGKTTVRFNNVTFAENTPGSTLFGSGFDIRNSILYSKTERTFCNDQSNTGNNLIEYSAAGGLFYSCLTAGLVRATNPLLGAPAANGGPTLTQLPASNSPVLNLGSNCRTIDQRGVARDTAVCDAGAVEIK
complement(1010081..1010365)       PHAGE_Paenib_Tripp_NC_028930: transposase; ATY46_04665; phage(gi971756981)           1.07e-07            MERPVHLLMDRAYEGNETRQLALDLGFVPVVPPKSNRVDPWEYDKEMYKRRNEVERLFRRLKGYRRIFTRFEQLDVMFLGFLSFVLVVDGLRMC
complement(1010425..1010844)       PHAGE_Paenib_Tripp_NC_028930: transposase; ATY46_04670; phage(gi971756982)           2.66e-19            MEITPAQFALIEHCLPLQRGNVSMTNLQVVNALLYVAEHGCKWRGLPERFGNWHTVYTRINRWAKSGVLDRMFAQLQTCQIVRIKIEAVSLDSTSIKVHPDGTGALKKTAHNPSGNRAADGTPKFIWLPQMLEQPSRSD
1010962..1011891                   PROPHAGE_Xantho_33913: IS1481 transposase; ATY46_04675; phage(gi21229606)            0.0                 MHALRQRTLLRAVEALVHGGRLTLIDLARAWPGATRVRAPLKACDRLLCNRTLQVERSAIEQDMAHWLLRGDQPVIVIDWSDLKPDKSWCLLRAAVPVGGRTPTLLDMVVSGKQQGSPDAEKRFLQQLRALIPDDVRPILVTDAGFRTPWFRAVSAMGWDWVGRLRGRTQVKPQDVPDDAAQWIDSRRLHALASNRARELPPMQANRSDPLDCRLVLYAKTPQGGQQRNRRSPAKVSRASSSLKATAREREPWLIVASPQLHAPSAKQLVNLYARRMQIELAFRDLKSHRYGQAMEDSLTRRGERLQIL
1011892..1012125                   PROPHAGE_Xantho_33913: IS1481 transposase; ATY46_04680; phage(gi21229606)            1.27e-39            MLNTLATFASWLAGLGCEATGIAQWLSPRSSTRKLYSTLRVGREALVRRWPMEPVSRWLERLRALPDAVREQMTLVL
1012214..1013398                   PROPHAGE_Mesorh_MAFF303099: transposase; ATY46_04685; phage(gi13475318)              1.86e-94            MLNRTLEVRFEQYGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRSAHQSMHHLVADADWSDQALLAAVAAQVLPPLSRKSAACHWIVDDTGFSKKGVHSVGVARQYCDRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKTALAMDQIDSALSTGMAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQPAPMPPASPKGGRPRTRPMRDSAHAPISVHEVAQSLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTLPKQTPVKTLECNVTIPTRLPRWPSDWLGLSPEASHTARVAGSHRTNGFGFSNTVELRKV
complement(1013513..1014481)       PROPHAGE_Xantho_33913: IS1479 transposase; ATY46_04690; phage(gi21229605)            0.0                 MQLTFGDAEGLGKRKQTRREIFLAEMERIVPWKRLLALIEPHYPVSGRPGRQPYALARMLRIHLLQQWYALSDPAMEEALHEIPTLRRFAQLGGLDNVPDETTILNFRRLLETHGIAARMLEAVNAHLSRKGQSLRSGTIVDATLIAAPSSTKNADRARDPEMHQTKKGNQWYFGMKAHIGVDEFSGLVHHVQCTAANVADVTVTHALLHGKEDSVFGDSGYTGAEKRDELQSCEAAFFIAAKRSTIQAIGNKRARAWAERWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQVQTLFALSNLWMVRRHLLPARG
complement(1014742..1015203)       PHAGE_Cronob_CR9_NC_023717: putative cell wall hydrolase SleB; ATY46_04695; phage(gi593777212)     6.81e-14            MKLVWILWLSHVLPQPAADSLCLSTTVYLEARDQTLRGQQAVAEVALRRLDSGLWGDSMCQVVTARKQFAPTIVAPGTQLKNDDAWNKALDVALAAQRNWALPVGQRKEIVPGASHFAASAIASPSWRNAYQVATIGDHTFYRVQTLRPRNTS
complement(1015752..1015994)       glycerophosphodiester phosphodiesterase; ATY46_04700                                 N/A                 MLTDPSHGQIRLFVNTMSNDIASGKPMNLSGDFTDARALRAPNAIWGALRARGISMIQTDQPLRLVQYLRSADRTSAADP
complement(1015988..1016272)       PHAGE_Paenib_Tripp_NC_028930: transposase; ATY46_04705; phage(gi971756981)           5.45e-08            MERPVHLLMDRAYEDNETRKLALDLGFVPVVPPKSNRVDPWEYDKEMYKRRNEVERLFRRLKGYRRIFTRFEKLDVMFLGFLSFVLVVDGLRMC
complement(1016332..1016751)       PHAGE_Paenib_Tripp_NC_028930: transposase; ATY46_04710; phage(gi971756982)           2.66e-19            MEITPAQFALIEHCLPLQRGNVSMTNLQVVNALLYVAEHGCKWRGLPERFGNWHTVYTRINRWAKSGVLDRMFAQLQTCQIVRIKIEAVSLDSTSIKVHPDGTGALKKTAHNPSGNRAADGTPKFIWLPQMLEQPSRSD
complement(1016784..1017515)       PHAGE_Entero_vB_IME197_NC_028671: glycerophosphoryl diester phosphodiesterase; ATY46_04715; phage(gi966199029)     1.49e-10            MVSAMLRALLVSLLLLPSTLSAAPASRHIALPDRLRDPHAGTLVVSHRGCWMLAAENSIAGIDACIAHGIDMVEVDLRTTRDGQLVLMHDERVDRITNGEGAVADLTAVQIESLHIRAEGGGAQAAVTAWHPPTFAQALAAAHGKTLINLDIKAASLDQVMDEVQAAGAQRDVLMNVPLDAPASTIERAHRAGIALQVLYEQRQSQHTPEQAFRMAAAMQPAALQLMFDDVSVIDSARRIRAC
complement(1017509..1018096)       TonB-dependent receptor; ATY46_04720                                                 N/A                 MAFWSRFNDLSISAIVLDGTGAVQNLGLVGKTQTLGLESEFAWRQTDMFGMTSSMTLQDPQTRGLSNAGTAVAGLNGKQISRTPKYIVSLSPTLYFDLVGKQTELTATAYRIGQRYLDYTNATALPAYTSYDIGMSSYLSQRLELQLHVANVSNSVGLTEGNARVDTLSGQGTSEAIYARPIFGRNYTASLTWRW
1018294..1018476                   hypothetical protein; ATY46_04725                                                    N/A                 MPAIIARAEGASEPADVVVCQRRGIAEIARAIGIDATSGAVARVAHAGIEAEATEFHRIP
1018607..1019293                   PROPHAGE_Mesorh_MAFF303099: transposase; ATY46_04730; phage(gi13475318)              3.82e-90            LSHADRKQPAHWYLKGLLLPGGRKSVEPTAARVHPQNVRSAHQSMHHLVADADWSDQALLAAVAAQVLPTLSRKSAACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKTALAMDQIDSALATGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQPAPMPPASPK
1019657..1020088                   PROPHAGE_Xantho_33913: IS1480 transposase; ATY46_04735; phage(gi21231089)            2.72e-86            MIVDAQSVKNSDTAGQKGYDAGKKVSGIKRHIAVDTQGFPHAVAVTTAEVTDRKGALEALKRCRSGLGRVKRLLCDSGYTGDPFAEGVQDILGKHVTVQIAKRSELHTFKVMPKRWSVERSFAWLEKNRRLWKNCERRLNTSS
complement(1020089..1021105)       PROPHAGE_Xantho_33913: IS1595 transposase; ATY46_04740; phage(gi21231554)            7.41e-125           MRADRSMLGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQALEISRWPQGFVCPRCAATAHSRFQRHGTTYWQCTACYRQTSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMRHLGVSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYLGGERNGGKAGRGSENKRPFVIAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEADHAHTVIEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTRLVPSLLAAAAASKPWSERALRDVTMFTAESAC

#### region 3 ####
1728937..1730172                   PHAGE_Ralsto_RSA1_NC_009382: transposase IRSO15-like; ATY46_08030; phage(gi145708108)     6.64e-25            MTAKVFEAALGIGAPWSVGAVEFDEATKVLTVPVDFKPGTRFKVSGQKGLHPVHDTVVKTYRHLNFFQHECYLKVRTPRVKLGDGSVRLVEPDFAGRLSGFTLLFEALVLMLSQQMPFAAVARIVGESAYRCMQVCNRYVEMALEQADFSDVTSLAIDETSRARGHDYVTLAADAQARRVIFVTEGRDAKAVKALAADLAAHGCPPEQITSVSIDMSPAFIKGVSDQLPNAQITFDKFHVVGHANAAVDKTRRIEQRTEKSLKGMRWTLLKDVFSLKPTAGAALHGLITAPKLTRTARAWLYKEQLREALDRKQINVMREMLKHWCVCVMRSKVEAMKEVAALVRRHMDGIVAWAQTRQTNGFLEAINGLFQSAKRRARGFKRLSTIKTVIFLIAGKLDFQTFNPHARQPT
complement(1730223..1730609)       PROPHAGE_Brucel_1330: IS711, transposase orfB; ATY46_08035; phage(gi23501420)        6.87e-12            MVAADARTAITFGLTPGNAHDAPAGRALLEHLGPVERPVHLLMDRAYEGNETRQLALDLGFVPVVPPKSNRVDPWEYDKEMYKRRNEVERLFRRLKGYRRIFTRFEKLDVMFLGFLSFVLVVDGLRMC
complement(1730567..1730986)       PHAGE_Paenib_Tripp_NC_028930: transposase; ATY46_08040; phage(gi971756982)           2.66e-19            MEITPAQFALIEHCLPLQRGNVSMTNLQVVNALLYVAEHGCKWRGLPERFGNWHTVYTRINRWAKSGVLDRMFAQLQTCQIVRIKIEAVSLDSTSIKVHPDGTGALKKTAHNPSGNRAADGTPKFIWLPQMLEQPSRSD
complement(1731053..1732429)       PROPHAGE_Xantho_33913: IS1478 transposase; ATY46_08045; phage(gi77747808)            0.0                 MRTRRPAAEQLPADELFRSRLENQIDLRHPLVQLSHRLPWSALEQALSPRLPATTSTGGRPALPVRLIAGLLYLKHAYDLSDEAVCERWLENPYWQFFTGEVVFQTCVPCDPSSLTRWRQRLGEAGMEALLAHTINTAHAMKAVDARELSRVIVDTTVQEKAIAHPTDSRLLEVARKKLVLLAKRHGIALRQSDARQGPALRRKAGRYAHARQFKRMRKVLRRQRTILARVSRDLQRKLAQLEPSVRERIGVWLERAQRLLAQRPKDKQKLYALHAPEVECMSKGKASSPYECGVKVGIAVSARKGLIVGARSFPGHPYDGDTLAEQLEQARGLLQDVNVIPQVAIVDLGYRGRDVEGVQILHRGKAKTLTRRQWRWIKRRQAVEPVIGHLKRDCRLNRCHLNGAQGDALHVLGCAAGDNLRWRLRWIACLRAWLQVARARSSTPSSTMLPANMVLEV
1732808..1733482                   PHAGE_Burkho_BcepGomr_NC_009447: BcepGomrgp35; ATY46_08050; phage(gi146329947)       2.20e-35            MKKAVVLLSGGMDSAAVIALAQEQGFAVYALSVRYGQRHTSELDAAARVAAAQGVVAHKVVDVDLRSIGGSALTDDIDVPDAGGDGIPVTYVPARNTIMLSLALGWAEVVGANDLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGAGLRVHAPLQFLSKADIVREGVRLGVDFGLTVSCYRADADGRACGHCDACRLRAAGFADAGVPDPTHYAILS
1733530..1733605                   tRNA                                                                                 N/A                 GGGCCGTTAGCTCAGTCGGTAGAGCAGAAGACTTTTAATCTTTTGGTCGATGGTTCGAATCCATCACGGCCCACCA
1733561..1733607                   attL                                                                                 N/A                 CTTTTAATCTTTTGGTCGATGGTTCGAATCCATCACGGCCCACCAAT
complement(1733727..1734911)       PHAGE_Stenot_Smp131_NC_023588: phage integrase; ATY46_08060; phage(gi589892030)      2.06e-153           MGRGRKRKFNPAIPAHIDQAALPQGVYWEDGRWYIIEAHPEGGRPKKRTVAHRHSRLSELHAIVECARGEIERGTLAFLDERFHRSTEFKALAPGTQKDYRQSGQAACAYVLKDGSQLGRMQVTRINVPTMQRLVETLAAGREATAMQPAIEPRPSKANHVLRYLRRLFGWGIRFGLCEHNPAKGVRQAKELAAHTMPEQDAFTAILRFAQQRATFDAHTKGSVSPYLHAVMVLAYNLRLRGAEVTDLTDAHAGEQGILARRRKGSRDNVTLWNEELRGAWAWLIEYRRRTMAAHERPVPLKPEQRRLVVSQSGTPLTKSALDSAWQRMMTLAIREGVIEEAQRFSLHGLKHRGITDTEGNLADKQEAAGHKTQEMTRRYSHDVPVVKPPRRIP
complement(1734911..1735132)       PHAGE_Stenot_Smp131_NC_023588: hypothetical protein; ATY46_08065; phage(gi589892029)     8.03e-22            MTGRILHFADLQRICSPDGPAPRLVVVCRWADRQGIRYRYDRKGRIWTTIDAVNAALGITEPAANQENAMELI
complement(1735129..1735335)       hypothetical protein; ATY46_08070                                                    N/A                 MSDEDTEAHRRQCEARYWLRQGYTDAKSVGLLQQLIAAKRGDQAAKDLRDEMREQWRNRQQWQQEQLL
complement(1735332..1735604)       hypothetical protein; ATY46_08075                                                    N/A                 MTQREISHPEPLPACRAGHAGRHIADGRRLQAGGGHVIECPCGRTKKHAGFDEALADWKRMHRIRVPRQTAPADSNVVQLGLRLRGGATQ
complement(1735601..1735846)       hypothetical protein; ATY46_08080                                                    N/A                 MTLDRVIAVSRAAQRYGGPGSLSTGEALTAALVLNRHDWLADMDYTIAQALDRIEEDSIAHLRQAERAIGSSAGESEGDHA
complement(1735843..1736118)       hypothetical protein; ATY46_08085                                                    N/A                 MAKSIVVYGPMASGKTLNADAICQVYSLKRVVELDERLQRKGDDWQLAQHDVLMLTNDRLLAELTAQRLCIEVVAIADARVRVGAAWRSPR
complement(1736280..1736690)       PHAGE_Stenot_Smp131_NC_023588: hypothetical protein; ATY46_08090; phage(gi589892028)     9.03e-20            MQQHAVTRPLTSSAGPGEQAITPAGIGFDLALGKDCSAIATLYITHDAVVVVAALTMGQHSSATQRWERRRGPGKGWKLISGPRLFTNEADRISNALADFMDDLDFPFDLANMLPRRPTAAAEAAIAAAALEVAHA
complement(1736916..1737194)       hypothetical protein; ATY46_08095                                                    N/A                 MNANKQFRVCAGVVLSFEMMQGYVMVMLHSDALHEVAPVLIACESFASADVMLGSDSQSIVLGRLHICMRADHAADVFDWLQCRFLAAVGAR
complement(1737191..1737409)       PHAGE_Stenot_Smp131_NC_023588: hypothetical protein; ATY46_08100; phage(gi589892024)     4.99e-08            MSYHTQEAPASAARQVTHYFSLIANTLEWNHAAWQSLMARLEGTGKAIHALTLADVAAAIADVDALLSEAQR
complement(1737718..1740414)       PHAGE_Stenot_Smp131_NC_023588: DNA primase-like protein; ATY46_08105; phage(gi589892027)     0.0                 MQEDLRQQVLSRLERDYGLKHRSGTEYMRGGKCPSCSKKELYTNHLKPWVVKCGRQSKCGRELHVKDLYDDLFDDWSKRFQPTAAAPNAAADAYLQFSRGFDLALLKGLYSQDSHYDRKISAGTATVRFPLVKGGWWERLIDRPHRFGKQKARFAPGQSYAGVWWAAPAALTAMQTVREVWIVEGIFDAIALLQHGMCAVSAMSSNAFPEESLRELAKARLADLPTLVWALDNEPGARAYTHKHIKRAAALGFESRAAQIVQRDGKKTDWNDLHLRAIASDDPKQWNNDINEARYQGDLLVARSAVDKGLLMFEHDGRNDFWLEYRSRLYWFDFDTQRFDKLRKEKLGDTDSDEGDEVAAEDLKKIKRAACSVQKIANCYPEALYFQRQEVTDESWYYFRVDFPHDGPSVKGTFTGGHLASASEFKKRLISLAAGAMFTGTGHQLDRLIEEQTEAIKTVDAIDFVGYSKEHRAYLLGDMAVRDGELVTANEEDYFEFDKLRLKTTQKSIRLEIQRDAEAFRVDWLPWLWQCFGTHGMVAMTFWFGSLFAEQIRAGHKSFPFLEATGEAGAGKTTLLTFLWKLLGRSDYEGFDPAKSSKAGRARAMGQVSGMPVVLLEADRSEPDKAHSKTFEWDELKDFFGGGTLATRGVRNGGNETYEPPFRGTIVITQNAAVDASEAILTRIVKLHFKRPQVTTESRIAADNLNALQVEEVSHFLVRAIRQERAILDLFVERVKVFEAKLRAQQDLRLERVIKNHAQMLALFDCLRMVITIPDDMVEQTRLALLDMALERQKAISADHAMVNEFWEVYEYLEATGHGKAVVNHSRDAQRIAINLNHFAARAAQFSQSVPDLKVLRALLSDSRRHKFIGANVAVNSAILKDEHSGAGTTVKCWVFSK
complement(1740424..1740636)       hypothetical protein; ATY46_08110                                                    N/A                 MTHANSWFTAQEPRFVDAASNVPQRVAPHAKHEEARLLAAAVDAHRRAGGAYVVIDNAICVPASARRLGV
complement(1740633..1740911)       hypothetical protein; ATY46_08115                                                    N/A                 MRKTLDWAALPPTAKLCLEVALTHGGLLKTEHGYIGRTAAPETAQRFGAVVVATLMREGLATSDSVDERLVVLTESAIALSTLQHANTEVGS
complement(1740922..1741242)       PHAGE_Stenot_Smp131_NC_023588: putative bacteriophage transcriptional activator; ATY46_08120; phage(gi589892022)     3.13e-32            MFGRKKIVFRCEACSARLIKRTSFLAHKFLRHDSYVCENPMCGATYTGHSELTGIASPSGVPTSHSELPPTPAYERAQALQAYRDSLGDRQMDLIPVGDEPFFPHL
1741574..1742011                   PHAGE_Burkho_KS5_NC_015265: gp11; ATY46_08125; phage(gi327198009)                    4.42e-15            MTVGKRLKEERKRLGLTQDEMAVQLGLTRYAQLNFEKDVNLPGGAYLLAALERGVDVMYVLSGHRAQLDPADRLLLSAFKDASPAARNAVLAALGLSADASSSKTGTGPVLSFNKSEIGSIISTTAPIDQSNMQIVVGGRKKKSK
complement(1742672..1743658)       PHAGE_Pseudo_phiCTX_NC_003278: tail protein; ATY46_08130; phage(gi17313247)          2.11e-109           MNYPIPQWRVVLDGVDLTERIAPRLLDLTLTECRGGEADQLDLRIHDHDGKMALPKRGVRLVVALGWKATGLVDKGTFIVDEVEYSGAPDIITVRARSADLTADMRTRRERSWHNTTLGAVLNTLAGEHGLTPRVAEALAKINLPHLDQANESDMNLLTNLGQRFDAVATVKAGALVFAPIGAGTTATGKPLPTVTLTRRDGDQHRYSVADRDAYTGVRAYWTDKGKAKRQSVLVGTDDNAKRLRESYADEATARQHAHAELERVKRGVAKFDYTLAIGRADLFPEQALTVSGFKPEIDGQRWLIAKTTHAINGSSGFTTSLELESIA
complement(1743655..1744056)       PHAGE_Stenot_Smp131_NC_023588: phage tail protein; ATY46_08135; phage(gi589892019)     8.14e-53            MMMSYGTFVFSLDSAAFLQLQRQMSWRHATSERVGARPASQFLGPGDDSIELSGLIAPELTGTRASLDTLRQLAADGEPLPLVDGAGVVYGPYLLLSINETASLFFEDGTPRRIEFQLSLRRADDTTPEATVA
complement(1744069..1746939)       PHAGE_Stenot_Smp131_NC_023588: phage tail tape measure protein; ATY46_08140; phage(gi589892018)     0.0                 MAASDNLRLQVILAAVDRATGPFRRVLSGSRGVATALRNQRDALRQLNSQHRDIGAYREQVAVAQRAKAALDAQRQSVRTLAQQIKATGTPTAAMNAEFKRAVRTARELKTAHGAQEAGLQRLRGRLETAGISTRELVTHERRLRGEIESTNTAMRAQQQRLAAIDAAQRRSARIQSAGLQASAYGTGMAFAGQRALRASALPINDAMEFESAMADVRKVVNFSTPQQFAQMGRDVENLSMRLPMLPAEIAKIVAAAGQAAIPRQELVRFAEDAAKMGVAFDSSAEEAGQTMATWRTAFRMGQAEVVVLADKINYLGNTGPASVNKISAVVNRIGALGEVAGLQSGPLAALGATVAGMGIESEVSATGIKNMLLTLASGESATKSQREAFDKLGIKATAMAQVMQKDAGGAIMSVLQKLRALPKAEQAATMTQLFGRESIGAIAPLLTNLELLQGNFAKVADAQRYGGSMSAEYASRVATSANSLQLLKNTAVVVSQSIGQTLLPQFKELTERTAAVVGQVTTWIRANPVLVGAIAKVAIGAAALVTILGGLLVAGGAAAMAFSQIHGAVALLSGGGGFGALIRQVVAFGGRVLPMLANGARPLLPLLGGISLPVLAIGAAVAAVALLVWKYWGPIKAFAIGVWQGIVDAAAPVLVELQAALAPLGTVWDTVAAAMGQAWAWVKQLLTPFEATTAQLHGATQAGRGFGQILGAVLVTQLQLAVKAIGWLVQAFVFVLPVIKQILGGVWQTVQGTWSLIVGVFTGNGDRIRQGLLQLWAGINLQLANWPARMLQAGADMIGGLVQGIRSKLGDAGNAIASIGSGVVDRFKGLLGIHSPSRVFAQLGDFTMQGLTVGLQRGQGAPVQAVTALGNRMRAVGAGLALATATAPVAAIDSGAPLSAPARVPGAPVGGNSYVIHVHAAPGMDATALAREVARQLEERERRIAASRRSSLRDD
complement(1747094..1747396)       PHAGE_Stenot_Smp131_NC_023588: tail protein; ATY46_08145; phage(gi589892015)         6.34e-35            MTPTFSQAVSLDQPIVRGEQTITQVNVRKPGAGELRGLKLVDVLQLDVTAMATLLPRITSPTLTTADVNAMDPADLLALGQEVQLFFLTKAQREADFQTA
complement(1747442..1747951)       PHAGE_Stenot_Smp131_NC_023588: tail core protein; ATY46_08150; phage(gi589892014)     2.67e-97            MALPKKLKALNLFNDGESYLGQVVEVKLPTLSRKMEEYRGGGMNGPVDIDFGQEKIELEWKCGGMMRSVLNQYGATTHNAVQLRFAGAYQRDDSGAVDAVEVVVRGRHSEIDPGTGKSGDDTEFSVKTSASYYKLTINGATVIEIDLVNMTEIVNGVDLLAAQRRAIGA
complement(1747982..1749148)       PHAGE_Stenot_Smp131_NC_023588: major tail sheath protein; ATY46_08155; phage(gi589892013)     8.52e-164           MSTAYHHGVRVIEFSAGTRTIRTVSTAVVGLVATADDADATIFPLNKAVLITDVLGAIASAGIQGTLRATLQGIADQTNPVTIVVRVAQDADAGNIPTNVIGEARSNSYTGLYALLAAQAQLGVRPRILGAPGLDTLPVAKLLATIAKKLRAMAYVRPVAETVAEAVTYRGQFSDRELMLIWPDFLAFDTATSTTTAAYATARALGLRAKIDTEQGWHKSLSNVPVAGVTGISKDVHWDLQDPATDAGVLNEGDITTLVTFNGQRFWGSRTCAEDRMFAFETATRTAQILADTIAEGVAFYVDKPMHPSMVKDLIETINAKFRDLKSSGYLIDANAWYDGTLNSATTLADGALRIDYDYTPVPPLENLQLYQKITTSYLADFAERVNA
complement(1749160..1749519)       PHAGE_Stenot_Smp131_NC_023588: baseplate assembly protein; ATY46_08160; phage(gi589892012)     2.63e-47            MIGVDAITGRVIEGEQHLAQSIACILTTPIGTREQRRDFGSLLPELIDQPLNGATRTLLYGATATALMRWEPRLRLTRVDLVVGDTPGSFVLNLEGDRTDAAPANARSRLTIPLRFRTS
complement(1749516..1750079)       PHAGE_Stenot_Smp131_NC_023588: baseplate assembly protein; ATY46_08165; phage(gi589892011)     8.96e-48            MGNASSALSNAIRLGTVAEVNLATARCRVQVGEMMTDYLPWLVTLTGTTIIWSAPAISEQVVVLSPAGDLADGLVLRGLYSDQFAAPATSDTLHMLRFADGAQLQYDTDTHALQATLPGGGTATITADGGITLNGPLTVNGTTQINGDVGITGTATVDIDVLGGGISLKHHKTTGVTAGSALSGVPQ
complement(1750140..1750718)       phage tail protein; ATY46_08170                                                      N/A                 MSNPLPRTSTAYAFDPTTGEYTGPVTVYLSELEGRYPLPPNTVATAPTPPAGLYERHRLSSLSGMWELVADYRGVMLYSIDSAAPIANTLALGDALPHGCTTSQPMAFLPSDYRRNVWDATRRSWRADPDYSAALVWEKATGAIAPRLAAGVALPGQLTTVAPPVSIDGTVVWDEDAQAWSVQPKVPEVAAV
complement(1750726..1752231)       PHAGE_Stenot_Smp131_NC_023588: putative phage tail fiber protein; ATY46_08175; phage(gi589892009)     8.03e-62            MPGLKIKITTAGRQALVNAERTGTRGVTIAAVGLTSAAFVAQAGLTALPSEIKRLTTIGGLVTAKDTIHVSVRDESSAAYSCYGFGLYLADGTLFGAYGQSELLVEKSGAASVLLALDVVFADVDTAQIIFGDINFTDPAATINVPGVVRLATDGQAIAGMDKERALSPSNLLAALDQRLGERGPTEYIKDLLSRSTAAAARSALGIRTAALSDAGHGNGLDADMLDGRQGDWYRDFRNMLNVPQSFLLPGQIVVMASLYPPNGLLVCDGAEISRAKYAALFAAIGTVYGAGDGSTTFNVPKIKEGTVITHTSAATAVGSYDPGQVISHTHGASAAAVGDHAHYTAINAAGNHAHGANAGAAGDHVHYAWTDAQGHHAHGGSTSASGDHQHPGVIPSSVINGYGVYRERDNDAAPSDGWTGAGGNHAHSFGTDGAGSHGHNISMNGVGNHTHGIGIAEGGNHVHDVDHRGAGAHAHTITVNAAGGIDNLPAGLRMTYCIAY
complement(1752241..1752786)       PHAGE_Stenot_Smp131_NC_023588: baseplate assembly protein; ATY46_08180; phage(gi589892008)     3.13e-63            MSSSLLPPNATPMERALAAVASRLEGIPLPYPDLWNPDTCPTGHLPWLAWALSVDDWKADWSDAVKRSRLRSAMAIQRRKGTADSVRMVVESFGGAVAIREWWQQEPRGEPHTFELALTLTGADGQSASARFVEEVIAEVERTKPVRAHFSFTQGFQAEARLNVVARGRVTLFLRLQGDAS
complement(1752779..1753669)       PHAGE_Stenot_Smp131_NC_023588: baseplate assembly protein; ATY46_08185; phage(gi589892007)     3.35e-106           MASFTAVDLSKLQAPDLIEALDFETIFAEALAQFRKLLPAFSALTEADPVYKILQLFAARELLLRQRANDKAQQTMLAFATGANLDHLGALFGVARLVLDSGQRDIGLAPTYESDVDFRRRIQLAPEGFSVAGPKGAYIFHALSASADVMDASATSPAPGQVLVTVQSRTGDGTAPQELLDEVVAVLADDGVRPLTDEVAVQSAEIIPYAIRGRLYTYAGPDSAVVIREALRSLQAYLAEAHRIGRDVPESAIKAKLFADGVQRIELDEPAADIRISRTQAAYCTAIDIVHAGIDE
complement(1754043..1754417)       hypothetical protein; ATY46_08190                                                    N/A                 MIDNDSGADKIYQVIAGITKSKKPEGLAPYIHVTKNIYVVPTPRKRKEETTDIESLFTQETLDTKLNDKNFNKSKKLDDASEYGKAAFATNVVAKRGSEINFDGFIPLLNNIKEAMADYYSTIK
complement(1756020..1756469)       PHAGE_Stenot_Smp131_NC_023588: tail completion protein; ATY46_08195; phage(gi589892006)     4.78e-45            MDELTALENWAAPLLARLEPSERRTLARKIGTELRRSQSQRIGKQQAPDGSAYSPRKQQLRHKAGRVKRAKMFAKLRQAKFLKVSASPNGVSVGFMGRVSRIARVHQEGLSEQVRKGGPTARYEKRVLLGFTRADRSLIEDIANRLIRR
complement(1756457..1756876)       PHAGE_Pseudo_phiCTX_NC_003278: predicted tail completion; ATY46_08200; phage(gi17313232)     7.06e-43            MIKPASMRAHLVAALPDLARDADRLLVFIDAGSLVSTFQPGLSFEYQYTLNLIVTDYAGHPDSVMLPLLEWVQVNQSELLSNPARRGEIAFEADILANDAVDLSIKLPLTERVVVTAKDGGGYDITHAPEPVIDPTWMS
complement(1756873..1757361)       PHAGE_Stenot_Smp131_NC_023588: hypothetical protein; ATY46_08205; phage(gi589892004)     3.98e-29            MVTRLIILLALIAVLVGGCVWQEQRVGTARQDRDAALQAKRQAEAERDSAKTSTTVVTQYVDRVQVVREAGAIITREIPIYVTQKADAACAIPAGFVRLHDAAATGNPAGPPAGDPDAPAAGITLSAVASTVVDNYTSCHATAAQLSALQDWIELHLPAATP
complement(1757361..1757999)       PHAGE_Stenot_Smp131_NC_023588: phage lytic enzyme; ATY46_08210; phage(gi589892003)     2.60e-60            MFTDTQLASIMQCSPQRAQRWHGPLLAAANRFGITTKRRAAHWLGQLGHESLSLSRMEEGLTYTTSARLLEVFGARITPAQAPRFLRNPVGLANFVYADLLGNGNEASGDGYRHRGRGPMQHTFRGNYQRIGELIGLPVEEQPDLLLQIEPSALGAAAYWQDNGLNVMADAGDVLGLGRKINLGNVRAKRLPEGHSDRVTRTQRALQILGVP
complement(1757999..1758274)       PHAGE_Stenot_Smp131_NC_023588: phage-encoded membrane protein; ATY46_08215; phage(gi589892002)     1.72e-24            MHSLVTVLTLMASLAICVRLLTYHRPVDARHRRGAGWCAWLLIASTGGQALHILLAGARSQVSLWHLGTLIVLAVLTYRARGNVARILKVD
complement(1758267..1758623)       PHAGE_Stenot_Smp131_NC_023588: phage-encoded membrane protein; ATY46_08220; phage(gi589892001)     4.23e-30            MTEPTSVSSGFLIATGVSLASVLPGIDGDALIGSFAGGALFVVSATKQPLLARLIYFPVSVIAGYQLAPELLRWLPIKSSGVAAFASAACAITVTLGLIEKSKSFDFSFLRRGGPPSA
complement(1758628..1758837)       PHAGE_Salmon_RE_2010_NC_019488: tail component protein; ATY46_08225; phage(gi418489702)     1.08e-21            MRVHAMQGDTVDLLCWRHLGSTAGLVERTYLLNPGLAERGAVLPHGTAVELPEVTTTTAAMTPLVQLWD
complement(1758837..1759304)       PHAGE_Stenot_Smp131_NC_023588: phage head completion/stabilization protein; ATY46_08230; phage(gi589891999)     2.37e-43            MSGFTATGTTSATPDAIANAPFWPAIAPADVRASMRLDGTVTDARLRQAIVAAMLAVNDALQAWADTQQAVGYAVLSDVPSTTVDGVSRRVQLYLRAVACATAVEVTERYRSFDATNSANQRADDLTPSITELRRDQRWAVRDLQNLPRSTVELI
complement(1759404..1760123)       PHAGE_Pseudo_phiCTX_NC_003278: terminase endonuclease subunit; ATY46_08235; phage(gi17313223)     7.71e-90            MADSPAKRHHSRVLAELEAAQRAPHQLMAGATAYEQHMAQLQSDRLRLKQIQSTQGKAALKVQLLPTYVPYLAGVLAGGQGAQDEIVMTCMVWRIDAGDYAGALELGAYVLKHNLQMPDRFSRTVGCVLAEEIAEAALSAQKTGQPFDAAVLADTAALTAEQDMPDEVRAKLHLALARACLAGMADETPADQAQPIVAAAVADLQRAIALHGSCGGKKDLERAERLLKKFSAEPSGTSA
complement(1760127..1761143)       PHAGE_Pseudo_phiCTX_NC_003278: capsid protein; ATY46_08240; phage(gi17313222)        1.12e-175           MQNATRLQFNQFAEQIAKLNGITSVFHSFAVEPTVQQKLESRMQESSEFLSKVNIIPVDELSGQKVGIGVTGSIASRTDTGAGKTRTPRNVAALDKNEYLAKKTDFDTAIPYALLDTWAKFPDFQARLRDAIVKRQALDRLQIGFNGTHAAADTDRAAFPLLEDVNIGWLQQYRTNAAQRVLASGKAAGKVVIGGAAGADYGNLDALVFDVVSNLLDPWHRKDPSLVVVLGRDLMHDKYFPMVNKDQPASEKIATDLILSQRRVGGLQVAEVPYLPDGALMVTSLANLSIYYQTGGRRRYIQEVPARDRVENYESSNDAYVVEDYGLGCVVEHIEIEA
complement(1761190..1762032)       PHAGE_Stenot_Smp131_NC_023588: phage capsid scaffolding protein; ATY46_08245; phage(gi589891996)     3.35e-83            MSGKTKKFRSNWFRVAVEGATTDGRTIQRSWIDDMAATYDRETYGARIWIEHMRSLLPDSPFRAYGDVTAVKAEEVEIDGSKRLALFAQIEPTADLITINKSKQKLYTSIEVQEKFANTGKAYLVGLAVTDSPASLGTSMLIFASQHPDANPLADRKQSPGNLFTVAEETTLEFSEVSEGSVANLLSRIRTALRSEDATNITAQQFADLGQGVEEIAEHVRGQDERFAGLQAEHAAQKTKHEQLANDLAQLRELLSQQADPSQPTRPVVTGGGAAVLTDC
1762154..1763938                   PHAGE_Stenot_Smp131_NC_023588: phage terminase ATPase subunit; ATY46_08250; phage(gi589891995)     0.0                 MGCTLVGMQSVSTQLPMDTRRQAKFLYWMGWRVTEIAQAIGENAKTVHSWKSRDEWDRADNVERIGGALEARLVVLIMKPEKSGGDFKEIDLLHRQLERQARIQRYQGGGNEADLNPAVANRNAAPKKKPKRNDFTEEQVEQLTTAFIDGCFDYQRDWYRASNERTRVILKSRQIGATFYFAREALIDALTTGRNQIFLSASKAQAHLFRGYMQQFVRETIDETLSGGDSIVFPNGAELFFLGTNARTAQGYHGNFYFDEFFWTYGFNELNKVASGMAMHKKWRKTYFSTPSSMAHEAYTFWTGERRNKGKPAAQRIQIDVSHDALAGGRRCQDRAWRQIVNILDAQRRGCDLFDIDELREEYSPDAFANLLMCDFVDDGASIFPLAMLQPCMVDSWVEWGQDYKPFAVRPYGDRAVWIGYDPAETGDTAGLVVLAPPQQPGGKFRLLERIQFRGMDFAKQAAEIERITRRYWVTYIGIDTTGMGSGVAQLVKQFFPNLVTFSYSPEVKTRLVLKAFDVIHNGRLEFDAGWTDVAQSLMAIRKTMTASGRQSTFSAGRSEETGHADLAWALFHALQNEPLEGRTARNSGFMEIS
1763938..1764960                   PHAGE_Stenot_Smp131_NC_023588: phage portal vertex protein; ATY46_08255; phage(gi589891994)     6.69e-165           MSTDQLPATAPAAPAVPACTEAFTFGDPTPVLDGRGVLDYLECWQNGRWYEPPVALDGLSKTTRSNPFLQSGLIFKRNMLARTFKPHRLLTREAFEQLSLDWITLGNGYLERRRNRMGSALSLAAPLSKYMRRGITEGEYFQVRTWHDEHVFEPGSVFQLREADVDQELYGLPEWMPAMQSALLNESATLFRRKYYNNGSHAGFILYLTDPQQSQEDVDALRTAMKGAKGPGNFRNLFLYSPGGNKDGLKLIPVSEVAAKDEFSGIKGITRDDMLAALRIPPQLMGIVPQNAGGFGSIREAAAVWAANELEPLQARMLKINDWVGDEVISFTQYAPPATA
complement(1764929..1765150)       hypothetical protein; ATY46_08260                                                    N/A                 MVRAFLDSLAAIGGEALGLQVIERAAAWALDLDFIEGAGLAQQAGAFATTEVLEHCVVLRWERITRSLAARTG
1765149..1765850                   PHAGE_Stenot_Smp131_NC_023588: site-specific DNA-methyltransferase; ATY46_08265; phage(gi589891992)     3.00e-130           MKNQLLQGDALTIMPTLEANSFDALITDPPYASGGLTAAARARPPSTKYCRDGGHADFVGDERDQRGHLAWMQLWLSECARLLKEGAPVLLFTDWRQLPLTTDALQAAGFKWRGVAVWDKTEGVRPQLGRFRNQAEYIVWGSKGGMPLDRRAPVLPGVVRTPVLKADKHHLTGKPTELMRSLVRICEAGGRILDPFAGSGTTLVAAELEGYRWTGVEMTQHYADVARARVAAL
complement(1765917..1766678)       PHAGE_Ralsto_RSA1_NC_009382: hypothetical protein; ATY46_08270; phage(gi145708078)     1.81e-09            MQIYAMTNLMIQATIDATIAEEAIGEDDGYARLTALTKSISSVHPSLENWFSLANTKGGATISLEDKSAFLADAAQNNSQDYAGGFRAVLSTASNDKEWLKPGRALLTFEPGQGYITFEIYDPINAYGEAGASEIFRSSIKAIAQTESIIFSGTDVSTRPQSGKEIKIYMGENQLFPHRRWLGWMGFVPHMVEAKHIPEAAALIPVGTKGTVIVAVDECFDLNNPAHLKRAHQVEARMAHVGLLDVTDTSLLS
complement(1767381..1767722)       hypothetical protein; ATY46_08275                                                    N/A                 MLQLTPEQYAKLCLPDPGSFLPRLAAEVRRDYPAAVSSRDDAQLLADVQTSYRHAVNAFGMTHLPTLVGWVKADVAWARGLRDQPLTKVWFAQTNTPNLTAADLLAMLSSDID
complement(1767703..1768260)       PHAGE_Ralsto_RSA1_NC_009382: hypothetical protein; ATY46_08280; phage(gi145708076)     1.76e-11            MPAFRRQRRGAAVEPHMMTWHQFAIIDCAMDPAYLSTLQHHAAASDLEIRSLFEHQPEAEHVAASPWLIELPIGAVHPGLDTWLAQLGRTAAGATRLASEVPFDELFTHLEQQLDVELPDGSLALMRFYDARAWLRYMEVLTLAQQLELLGPILEWQVMALGQHWTLSRDEARKLQEAADAAADT
complement(1768209..1768610)       PHAGE_Ralsto_RSA1_NC_009382: putative bacteriophage gp29 protein; ATY46_08285; phage(gi145708075)     2.15e-08            MWIVVGDPTSGGGQVITGSRETDVDGLPVARVGDRATCRKHKGIFAIVDGDPTIIIEGQPVALDGAHLACGCTISTQRQSRNYVDLGGGTDSRSLAPPAAESTSTTMPLDKPPVCLECLLSGGSGGAPLLSRT
complement(1769749..1771035)       PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; ATY46_08290; phage(gi399528790)     1.31e-101           MFALIDGNNFYASCERVFQPELRGRPLVVLSNNDGCAIARSDEAKALGVTMGQPIHKVPTQIRRRLALRSANFGLYGDIASRIGVILRQAAPRVEVYSIDESFLDLAGIRDRRQLAVDLRERVYQWTGIPNCIGIAPTKTLAKLANRVAKDAARKPGSYPADLAGVCDLAALSASELDAVLRATSVGDLWGVGRRWSARLQARGVYTAADLRDAAADDLLAEFGVVMARAQRELQGHACLELEEVEPDRQQIMVSRSFGTWVSNPQDMSEALATFAMRATEKLRARGLTSSAIGIFADTDSFKPGVPQHNPSRTAPLASATSDSRIVLTTVRRLFQGFMREGFAYKKAGVCLMDLAKPEDLQGDLFTPARIGHEKLMSALDAINRRFGRGTAGLGASGWQNSPSWASRQELLSGRFTTSLADLPRATC
1771753..1771799                   attR                                                                                 N/A                 CTTTTAATCTTTTGGTCGATGGTTCGAATCCATCACGGCCCACCAAT

#### region 4 ####
complement(2190070..2191545)       PROPHAGE_Xantho_33913: IS1478 transposase; ATY46_10110; phage(gi77747808)            1.67e-151           MAHTQNADFFRQPLAEMIDPRHPLAVLARRLPRAQIEAVLAPHFARKVRAGRAVAQHDLFGPSVQVAGAGIAASGRPRLPIRLMASLLDLKHAYKLSDEELVERWAQNVVWQHFSGMAFYEPRLPCDATQVGRFRAAIGEAGVEELLKATIDTAVSSKAIVPAEFERLIVDTTVQEKAIAHPVDWRLMENARHKLVAAAKRAGIALKQTLAKETKTLRRKAGGYAHARQFKRLRKVLKRQRTILGIVLREVQRKIGQASQATAPALENLHTLMQRAERIHAQQPNGKNKLYALHAPEVECIGKGKARKPYEFGVKVSVAITHKQGLMVGARSFTCTPYDGHTLHEQLEQARILSEDTAGAPKQVVVDLGFRGVDAANPGVEIIHRGKFKRLTDEQRRWLKRRQAVEPAIGHLKHDNGMDRCWLQGANGDALHAVLCAAGDNIRWLLRAMVRLGLKGLFAPMVARLIMLATVLAMSLRARNTRPHRLAWCVW
complement(2191867..2192049)       hypothetical protein; ATY46_10115                                                    N/A                 MRYQGRLRDWNDHKGVGFATPNGGGDRAFVHISAFAQQSRRPRNGEIITYAIERDAQKRS
complement(2192198..2193397)       homoserine O-acetyltransferase; ATY46_10120                                          N/A                 MTEFIPLGTLYHALPSPFQMKRGGVLHQAHVAYETWGALAADRSNAVLIVTGLSPNAHAAANQANPEPGWWEAMVGPGKPIDTARWFVVCVNSLGSCKGSTGPASVNPATGALYRLTFPDLSIEDVADAAADVVRALGIAQLACLIGNSMGGMTALALLLRHPGIARSHINISGSAQALPFSIAIRSLQREAIRLDPHWNGGHYDDTRYPESGMRMARKLGVITYRSALEWDGRFGRVRLDSEQSEDDPFGLEFQVESYLEGHARRFVRFFDPNCYLYLSRSMDWFDLAEYVDDKPAADMGIDSPGADALPAAKSETGVSTASTVLAGLARIRIARALAIGANTDILFPVQQQEQIADGLRAGDADARFIGLDSPQGHDAFLVDFARFGPAVRDFLQGC
2193592..2194206                   PROPHAGE_Mesorh_MAFF303099: transposase; ATY46_10125; phage(gi13475318)              4.02e-81            MLNRSLEVRFEQYGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRSAHQSMHHLVADADWSDQALLAAVAAQVLPTLSRKSAACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKTALAMDQIDSALATGIAAGVVLGNL
2194258..2195226                   PROPHAGE_Xantho_33913: IS1479 transposase; ATY46_10130; phage(gi21229605)            0.0                 MQLTFGDAEGLGKRKQTRREIFLAEMERIVPWKRLLALIEPHYPVSGRPGRQPYALATMLRIHLLQQWYALSDPAMEEALHEIPTLRRFAQLGGLDNVPDETTILNFRRLLETHGIAARMLEAVNAHLSRKGQSLRSGTIVDATLIAAPSSTKNADRARDPEMHQTKKGNQWYFGMKAHIGVDEFSGLVHHVQCTAANVADVTVTHALLHGKEDSVFGDSGYTGAEKRDELQSCEAAFFIAAKRSTIQAIGNKRARAWAERWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQVQTLFALSNLWMVRRHLLPARG
2195418..2196386                   PHAGE_Burkho_KS5_NC_015265: ISBmu23 transposase; ATY46_10135; phage(gi327198044)     1.86e-113           MQLTFGDAEGLGKRKQTRREIFLAEMERIVPWKRLLALIEPHYPVSGRPGRQPYALARMLRIHLLQQWYALSDPAMEEALHEIPTLRRFAQLGGLDNVPDETTILNFRRLLETHGIAARMLEAVNAHLSRKGQSLRSGTIVDATLIAAPSSTKNADRARDPEMHQTKKGNQWYFGMKAHIGVDEFSGLVHHVQCTAANVADVTVTHALLHGKEDSVFGDSGYTGAEKRDELQSCEAAFFIAAKRSTIQAIGNKRARAWAERWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQVQTLFALSNLWMVRRHLLPARG
2196497..2196679                   PROPHAGE_Mesorh_MAFF303099: transposase; ATY46_10140; phage(gi13475318)              3.74e-06            MFRPSLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQPAPMPPASPKNLFTIS
complement(2196666..2197142)       PROPHAGE_Xantho_33913: IS1480 transposase; ATY46_10145; phage(gi21231089)            8.28e-91            MIVDAQSVKNSDTAGQKGYDAGKKVSGIKRHIAVDTQGFPHAVAVTTAEVTDRQGALEALKRCRSGLGRVKRLLCDSGYTGDPFAEGVQDILGKHVTVQIAKRSELHTFKVMPKRWIVERSFAWLEKNRRLWKNCERRLNTSLQFIHLAFLALLLRRS
2197657..2198655                   PROPHAGE_Xantho_33913: IS1595 transposase; ATY46_10150; phage(gi21231554)            4.99e-126           MVGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQALEISRWPQGFVCPRCAATAHSRFQRHGTTYWQCTACYRQTSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMRHLGVSYPTAWRMKHKLMQAMTQREANRKLGGIVQLDDAYLGGERNGGKAGRGSENKRPFVIAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEADHAHTVIEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTRLVPSLLAAAAASKPWSERALRDVTMFTAESAC
2199386..2199847                   PROPHAGE_Xantho_33913: IS1481 transposase; ATY46_10155; phage(gi21229606)            4.72e-91            MGWDWVGRLRGRTQVKPQDVPDDAAQWIDSRRLHALASNRARELPPMQANRSDPLDCRLVLYAKTPQGRQQRNRRSPAKVSRASSSLKAAAREREPWLIVASPQLHAPSAKQLVNLYARRMQIELAFRDLKSHRYGQAMEDSLTRRGERLQIL
2199848..2200081                   PROPHAGE_Xantho_33913: IS1481 transposase; ATY46_10160; phage(gi21229606)            1.52e-39            MLNTLATFASWLAGLGCEATGIAQWLSPRSSTRKLYSTLRVGREALVRRWPMEPVSRWLERLRALPDAVREQMTLAL
complement(2200182..2200730)       transposase; ATY46_10165                                                             N/A                 MRDSAHAPISVHEVAQSLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTRPKQTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRPRRSGPNATSPSQLDCHAGLRTG
complement(2200885..2201901)       PROPHAGE_Xantho_33913: IS1595 transposase; ATY46_10170; phage(gi21231554)            8.93e-124           MRADRSMLGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQALEISRWPQGFVCPRCAATAHSRFQRHGTTYWQCTACYRQTSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMRHLGVSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYLGGERNGGKAGRGSENKRPFVIAVEITEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEAEHAHTVIEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTRLVPSLLAAAAASKPWSERALRDVTLFTAESAC
2202189..2202677                   PROPHAGE_Xantho_33913: IS1480 transposase; ATY46_10175; phage(gi21231089)            3.04e-88            MIVDAQSVKNSDTAGQKGYDAGKKVSGIKRHIAVDTQGFPHAVAVTTAEVTDRQGALEALKRCRSGLGRVKRLLCDSGYTGDPFAEGVQDILGKHVTVQIAKCSELHTFKVMPKRWSVERSFAWLEKNRRLWKNCERRLNTSLQFIHLAFLALLLRRSRTGS
2202882..2203850                   PHAGE_Burkho_KS5_NC_015265: ISBmu23 transposase; ATY46_10180; phage(gi327198044)     1.86e-113           MQLTFGDAEGLGKRKQTRREIFLAEMERIVPWKRLLALIEPHYPVSGRPGRQPYALARMLRIHLLQQWYALSDPAMEEALHEIPTLRRFAQLGGLDNVPDETTILNFRRLLETHGIAARMLEAVNAHLSRKGQSLRSGTIVDATLIAAPSSTKNADRARDPEMHQTKKGNQWYFGMKAHIGVDEFSGLVHHVQCTAANVADVTVTHALLHGKEDSVFGDSGYTGAEKRDELQSCEAAFFIAAKRSTIQAIGNKRARAWAERWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQVQTLFALSNLWMVRRHLLPARG
complement(2203965..2204579)       PROPHAGE_Mesorh_MAFF303099: transposase; ATY46_10185; phage(gi13475318)              8.65e-81            MLNRTLEVRFEQYGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRSAHQSMHHLVADADWSDQALLAAVAAQVLPPLSRKSAACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKTALAMDQIDSALATGIAAGVVLGKV
2204644..2205030                   PROPHAGE_Xantho_33913: IS1478 transposase; ATY46_10190; phage(gi77747808)            9.82e-57            MKLSFWQFSPMRTRRPAAEQLPADELFRSRLENQIDLRHPLVQLTHRLPWSALEQALSPRLQATTGAGGRPALPVRLIAVKHAYDLSDEAVCERWLENPYWQFFTGEAVFQTCLPCDRRPPILSSSRV
complement(2205027..2205872)       PROPHAGE_Xantho_33913: IS1404 transposase; ATY46_10195; phage(gi21232569)            3.46e-178           MVSAPARRALVREWIAGGASERCALAAIGMSASALRYRPREDRNVELREHSVALAHRHRRYGVGMISLKLRQEGRLVNYKRVERLYRQQQLQVRRRKRKKVPVGERQPMLRPTKANPVWSMDVVFDRTAEGRAIKSLVIVDDATHQAVAIDVERAISGHGVARVLDRLAHSRGLPKVIRTDNGKEFCGKAMVAWAHANRVQLRQIQPGKPNQNAYVESFNGRLRDECLNEHGFPTLLHARTEIERWRREYNQHRPKKAIGAMTPATYAQQLANSDIINPGL
complement(2205866..2206129)       PROPHAGE_Xantho_33913: IS1404 transposase; ATY46_10200; phage(gi21232568)            1.93e-50            MKKRFSEEQIIGVLREAEAGMPIKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDLEAENTRLKKLLAEQVFQNDLIKDALQKQW
complement(2206316..2206783)       energy transducer TonB; ATY46_10205                                                  N/A                 MWATPIVLLIVVPSWWWARHSDESFAKDPQPLPAASRQILPTTDGPRAMTMVAHQPARPAVSSVEAKPLPGNAMPSYPPAVARAGVQGNRIARLQLDVQGRVSDVTIVDRGGSDDPRLDAAVVESLRQWRFEPATRDGHAVVSSVQVPVEFTAQR
complement(2207144..2207803)       energy transducer TonB; ATY46_10210                                                  N/A                 MPAPRPASDRHIVLRLPRHTLKIAGIAFAVGLLLFLLVWATGRKDNFYKPSSAQPTAGAPADDTIAPLPAPLPAQDGGSDMPQAKPPADTPTLVDAAPPAPPAPPLPEDAAPGAPGSAAPSKAPVAGGDRPVPIEGQMRPPRYPSAALRRGDAGDVVVRVDVDATGNPGGVTLVQRSGSRDLDRAAMEAVRHWRFHPAQRNGQPVAGSTDIPFEFKPAQ
2207915..2209264                   PHAGE_Bacill_G_NC_023719: gp287; ATY46_10215; phage(gi593777743)                     7.07e-12            MLDPALLRQHPADLAERLRSTRGFALDTAKLESLESERKHMQVRTQELQSLRNSKSKAIGQAKAKGEDVAALMAEVAGVGDELLHSHGRLTVVQHELEKIYAVIPNLPHADVPLGKSEADNVEQSRWGTPRQFDFPVKDHVELGAPNGWLDGETAVKLSGARFTVLRGPIARLHRALAQFMLDLHVGEHGYEETNVPLLVNADSMRGTGQLPKFEDDLFRIYENEYEGHTDEETGESFYTPTGGVDPDPAYYLIPTSEVPLTNIVRDEIIDAERLPLRMTAHSMCFRAEAGSGGRDTRGMIRQHQFEKVELVTACAPEDSDAEHQRMTRCAEVVLEQLGLPYRKVLLCTGDMGFSAIKTYDLEVWLPSQNTYREISSCSNCGDFQARRMQARWRNPVSGKLELLHTLNGSGTAVGRAMIAVMENYQNADGSIDVPQVLRPYMGGIERIG
complement(2209414..2209890)       PROPHAGE_Xantho_33913: IS1480 transposase; ATY46_10220; phage(gi21231089)            6.80e-90            MIVDAQSVKNSDTAGQKGYDAGKKVSGIKRHIAVDTQGFPHAVAVTTAEVTDRQGALEALKRCRSGLGRVKRLLCDSGYTGDPFAEGVQDILGKHVTVQIAKRSELHTFKVMPKRWSVERSFAWLEKNRRLWKNCERRLNTSLQFIHLAFLALLLRRS
2210787..2211971                   PROPHAGE_Mesorh_MAFF303099: transposase; ATY46_10225; phage(gi13475318)              2.80e-80            MEPMAARVHPQNVGSAHQSMHHLVADADWSDQALLAAVAAQVLPPLSRKSAACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKTALAMDQIDSALATGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQPAPMPPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTRPKQTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRPRRSGPNATSPSQLDCHAGLRTG
complement(2212184..2213152)       PHAGE_Burkho_KS5_NC_015265: ISBmu23 transposase; ATY46_10230; phage(gi327198044)     2.49e-113           MQLTFGDAEGLGKRKQTRREIFLAEMERIVPWKRLLALIEPHYPVSGRPGRQPYALARMLRIHLLQQWYALSDPAMEEALHEIPTLRRFAQLGGLDNVPDETTILNFRRLLETHGIAARMLEAVNAHLSRKGQSLRSGTIVDATLIAAPSSTKNADRARDPEMHQTKKGNQWYFGMKAHIGVDEFSGLVHHVQCTAANVADITVTHALLHGKEDSVFGDSGYTGAEKRDELQSCEAAFFIAAKRSTIQAIGNKRARAWAERWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQVQTLFALSNLWMVRRHLLPARG

#### region 5 ####
2388678..2388694                   attL                                                                                 N/A                 CCCTACACCCCTACAAT
complement(2389777..2390424)       PHAGE_Xantho_Cf1c_NC_001396: hypothetical protein; ATY46_11025; phage(gi17975752)     1.36e-70            MTSSGREALKWIALVLMTGDHVAKVLFGGYVPVLSELGRIAFPVFALVMAYNLAQPRADYAKSVLRLAGWGLLAQPFHAWAFGYWMPLNVLLTFACAALLVWTVHARHWLYAFVFVVVVPVLVDYQWFGVLLVLAAWGWFRSGRLQWFAGVLASMAALCWYNGNVWALAALPVLALGYVWWPLPRLRWAFYGYYVGHLGLLVLIVSLPAFQQHVA
complement(2390426..2391619)       PHAGE_Xantho_Cf1c_NC_001396: hypothetical protein; ATY46_11030; phage(gi9626134)     5.73e-50            MPIELYTGQPGNGKTALMMERLVEEAKRAERPIFAAGIDGLQDGLATVLDDPRKWNDKDADGNYVVPNGSLIFVDEAWKWYGHLHDATRQQTPKHVLDLAEHRHRGLDFVWTTQQPNQLYPFVRGLIGAHTHVVRRFGTKMIDVFRWGELNEEIKSSAKRDLAQRTTRLLPSSIFGAYKSAEVHTIKPRIPWKVMALPGLVILAIALGWLAYTMLKPSAMAGKLGGKGTQSASADAAPGGSATTARRDGPRWESPTEYAKQHLPRFGTMPWTAPVFDDRSITADPMLICMSSLAGTDAQGKHKEASCTCITEQGTAYDLDQPQCRTIAKRGPVYNPYRQQRQNEQQPAQQQQAAQGGVAAPGLNGVAVQRSTRTQGSFPESKAYSTKTTTPSTTLEM
complement(2391619..2391948)       hypothetical protein; ATY46_11035                                                    N/A                 MPWLIAQLVTALAWLFKSRIGLWIMTALVWLGINFGTIKMVVEPAIDLLKDYAQGMGSGNGQLGADAMAWFGVLQFDKALTMVISAVAAKHAIMQGRLFLFKRGFGAKP
complement(2391948..2393354)       PHAGE_Xantho_Cf1c_NC_001396: A coat protein; ATY46_11040; phage(gi17975746)          6.04e-13            MGWLARVFASAIARRLAYVLVAATLAWCGIGCASAEDFGTQGAAYSACMSQTAAYLASLGRGANDRNPECNVEQGSHAYRGQFETRDCSSCDWYRAYYGYFAWSKGCDQEPDYTGSGPWGTYVGTARNGSIGCRNGCDGVWFGNSDDTMTWNATGAICPKDPEKTCDAMTVGYVWNGYLGVCEPPPNEKCPEGQVPDGKGGCSPNKCPEGMLLQADGTCAPKKNDCPAGQIRSPSGSCLPGDGQCAAGEVRGPDGTCKKDGDGDGEPDEPGEGDKSQFSGGDSCDSPPSCSGDAIMCGQARIQWRIDCNTRRDVNITGGSCAAMPVCVGTNCKALEYSQLLMQWRAACALEKAANNSGGGTGNNADVKAIRDAITGNGTADIGADGKPADAFSDESGYGQEGYPTGELDTQGFGYSRTCPTIPDVAVFGQTLHFDTSKFCQWMVLGGQIVLVMASLVSLRLMSQGGSA
complement(2393491..2393721)       methyltransferase; ATY46_11045                                                       N/A                 MRKLKTLFKNKTAALAAVGSAALVSAPAFASGGGGVDVGDVVSAIQGAAGPIAAIGGAVLTVMVGIKVYKWVRRAM
complement(2393733..2393936)       hypothetical protein; ATY46_11050                                                    N/A                 MAVLVPACLEADLDTAAGTCTAVIWIPQPSLLPELAVKDAQAIGSAIAFLWATAYVFRLIRKKIQQS
complement(2393940..2394236)       PHAGE_Xantho_Cf1c_NC_001396: V protein; ATY46_11055; phage(gi17975750)               8.53e-55            MKVQVMSSAVAVRSFPAREGKPATHFREQTAAVLRDGDFPLPFTIGLDEDQAPYGEGFYIIDPKSLQNNKFGGLEFGRRIRLIPDATAKAVQPAARVA
complement(2394233..2395174)       PHAGE_Xantho_Cf1c_NC_001396: Probable site-specific integrase; ATY46_11060; phage(gi17975748)     0.0                 MQEQPTQSRELSAFDASVGVMQAATRRTEIAAENIQKNKRVVGTSVREFDAAHPVALTAEGQRAALALGLVHYKTSDTRASTTGTVTIEIDPLQARAQRLRKSVITGARLHDQEAKKGSFRGAWYFLTLTYRDGSDSSPRDVSELFKRMRGHFNRLKSGRARWNRESFRYVWVGELTQRFRPHYHVMLWVPTGMYFGKVDQRGWWPHGTTQIEKARNCVGYLAKYASKFTALTAGAFPKGFRTHGIGGLDTESKRELRWWKAPKDAREALGGEADIRKAKGGWFDRLTGEFWPSPWKVTFIFGRTFAWKVVQL
complement(2395426..2395638)       hypothetical protein; ATY46_11065                                                    N/A                 MALSTDTNALALIGASALTVIVGLARLVAWILDRRAEAALRAHREQVFIIESYVSLVAPTVSRRVTICSA
complement(2395638..2395823)       hypothetical protein; ATY46_11070                                                    N/A                 MGFQVQYRDGRRWVVLASHPTRNAARDDAAARIAFLVADGFKYGDVVRDFRVRGVTVAEAA
2395949..2396419                   PHAGE_Xantho_Cf1c_NC_001396: 18.2K protein; ATY46_11075; phage(gi17975749)           2.20e-43            MSAENELIDLVRAGGKFSSDNALAQKLGVTRAMVSSWRSGRYAMPDDQIAQLCALAKLDGASWMARIHTERAGSATERALWKSILDRLAPITAVVGALAIVAVGLHAGAHEGLLTALSPLAITPTVYTLCEVVLLTLLCTVAAYYCRSLHRKRTGQ
2397077..2397106                   attL                                                                                 N/A                 CCGTATGAGCTACAGACCGCAGAACAACCA
2397081..2397392                   chloride channel protein; ATY46_11080                                                N/A                 MSYRPQNNHDGLWWEIALGIFVGQLMTAAFASVVALCLGYFTLRSVSAALPTVAPQPLYTPRSQRAEPPTLQLRPLESDERCIQHKRFRRLSNGWQELPNDPC
complement(2397685..2397978)       hypothetical protein; ATY46_11085                                                    N/A                 MRDDKDPGTLEMQLPKRRGRPPANGVAAQSAADHSRLYRARRKVSAMYAWSDCINTSGIGGEPVSDAVVLEAIRRAIAKGQREAVVDLAGELVRRYS
complement(2398139..2398786)       PHAGE_Xantho_Cf1c_NC_001396: hypothetical protein; ATY46_11090; phage(gi17975752)     1.36e-70            MTSSGREALKWIALVLMTGDHVAKVLFGGYVPVLSELGRIAFPVFALVMAYNLAQPRADYAKSVLRLAGWGLLAQPFHAWAFGYWMPLNVLLTFACAALLVWTVHARHWLYAFVFVVVVPVLVDYQWFGVLLVLAAWGWFRSGRLQWFAGVLASMAALCWYNGNVWALAALPVLALGYVWWPLPRLRWAFYGYYVGHLGLLVLIVSLPAFQQHVA
complement(2398788..2399981)       PHAGE_Xantho_Cf1c_NC_001396: hypothetical protein; ATY46_11095; phage(gi9626134)     5.73e-50            MPIELYTGQPGNGKTALMMERLVEEAKRAERPIFAAGIDGLQDGLATVLDDPRKWNDKDADGNYVVPNGSLIFVDEAWKWYGHLHDATRQQTPKHVLDLAEHRHRGLDFVWTTQQPNQLYPFVRGLIGAHTHVVRRFGTKMIDVFRWGELNEEIKSSAKRDLAQRTTRLLPSSIFGAYKSAEVHTIKPRIPWKVMALPGLVILAIALGWLAYTMLKPSAMAGKLGGKGTQSASADAAPGGSATTARRDGPRWESPTEYAKQHLPRFGTMPWTAPVFDDRSITADPMLICMSSLAGTDAQGKHKEASCTCITEQGTAYDLDQPQCRTIAKRGPVYNPYRQQRQNEQQPAQQQQAAQGGVAAPGLNGVAVQRSTRTQGSFPESKAYSTKTTTPSTTLEM
complement(2399981..2400310)       hypothetical protein; ATY46_11100                                                    N/A                 MPWLIAQLVTALAWLFKSRIGLWIMTALVWLGINFGTIKMVVEPAIDLLKDYAQGMGSGNGQLGADAMAWFGVLQFDKALTMVISAVAAKHAIMQGRLFLFKRGFGAKP
complement(2400310..2401716)       PHAGE_Xantho_Cf1c_NC_001396: A coat protein; ATY46_11105; phage(gi17975746)          6.04e-13            MGWLARVFASAIARRLAYVLVAATLAWCGIGCASAEDFGTQGAAYSACMSQTAAYLASLGRGANDRNPECNVEQGSHAYRGQFETRDCSSCDWYRAYYGYFAWSKGCDQEPDYTGSGPWGTYVGTARNGSIGCRNGCDGVWFGNSDDTMTWNATGAICPKDPEKTCDAMTVGYVWNGYLGVCEPPPNEKCPEGQVPDGKGGCSPNKCPEGMLLQADGTCAPKKNDCPAGQIRSPSGSCLPGDGQCAAGEVRGPDGTCKKDGDGDGEPDEPGEGDKSQFSGGDSCDSPPSCSGDAIMCGQARIQWRIDCNTRRDVNITGGSCAAMPVCVGTNCKALEYSQLLMQWRAACALEKAANNSGGGTGNNADVKAIRDAITGNGTADIGADGKPADAFSDESGYGQEGYPTGELDTQGFGYSRTCPTIPDVAVFGQTLHFDTSKFCQWMVLGGQIVLVMASLVSLRLMSQGGSA
complement(2401853..2402083)       methyltransferase; ATY46_11110                                                       N/A                 MRKLKTLFKNKTAALAAVGSAALVSAPAFASGGGGVDVGDVVSAIQGAAGPIAAIGGAVLTVMVGIKVYKWVRRAM
complement(2402095..2402298)       hypothetical protein; ATY46_11115                                                    N/A                 MAVLVPACLEADLDTAAGTCTAVIWIPQPSLLPELAVKDAQAIGSAIAFLWATAYVFRLIRKKIQQS
complement(2402302..2402598)       PHAGE_Xantho_Cf1c_NC_001396: V protein; ATY46_11120; phage(gi17975750)               8.53e-55            MKVQVMSSAVAVRSFPAREGKPATHFREQTAAVLRDGDFPLPFTIGLDEDQAPYGEGFYIIDPKSLQNNKFGGLEFGRRIRLIPDATAKAVQPAARVA
complement(2402595..2403536)       PHAGE_Xantho_Cf1c_NC_001396: Probable site-specific integrase; ATY46_11125; phage(gi17975748)     0.0                 MQEQPTQSRELSAFDASVGVMQAATRRTEIAAENIQKNKRVVGTSVREFDAAHPVALTAEGQRAALALGLVHYKTSDTRASTTGTVTIEIDPLQARAQRLRKSVITGARLHDQEAKKGSFRGAWYFLTLTYRDGSDSSPRDVSELFKRMRGHFNRLKSGRARWNRESFRYVWVGELTQRFRPHYHVMLWVPTGMYFGKVDQRGWWPHGTTQIEKARNCVGYLAKYASKFTALTAGAFPKGFRTHGIGGLDTESKRELRWWKAPKDAREALGGEADIRKAKGGWFDRLTGEFWPSPWKVTFIFGRTFAWKVVQL
complement(2403788..2404000)       hypothetical protein; ATY46_11130                                                    N/A                 MALSTDTNALALIGASALTVIVGLARLVAWILDRRAEAALRAHREQVFIIESYVSLVAPTVSRRVTICSA
complement(2404000..2404185)       hypothetical protein; ATY46_11135                                                    N/A                 MGFQVQYRDGRRWVVLASHPTRNAARDDAAARIAFLVADGFKYGDVVRDFRVRGVTVAEAA
complement(2405066..2405248)       antitoxin; ATY46_11140                                                               N/A                 MAKLDPRVSEFESTEAADYDWWFRAKIERAMADTRPTISHDQVMARTRCDRSRREAIEAR
complement(2405370..2405582)       hypothetical protein; ATY46_11145                                                    N/A                 MVKRLKDEPALPPEDVVAKSGFVFSFDDFRGWYRVTHRLQQSSGSIYRDPTDTEIEQAFESYQQSRSDFY
2405799..2406170                   PHAGE_Paenib_Tripp_NC_028930: transposase; ATY46_11150; phage(gi971756982)           7.75e-18            MQRGNVSMTNLQVVNALLYVAEHGCKWRGLPERFGNWHTVYTRINRWAKSGVLDRMFAQLQTCQIVRIKIEAVSLDSTSIKVHPDGTGALKKTAHNPSGNRATDGTPKFIWLPQMLEQPSRSD
2406128..2406514                   PROPHAGE_Brucel_1330: IS711, transposase orfB; ATY46_11155; phage(gi23501420)        9.50e-12            MVAADARTAITFGLTPGNAHDAPAGRALLEHLGPVERPVHLLMDRAYEGNETRQLALDLGFVPVVPPKSNRVDPWEYDKEMYKRRNEVERLFRRLKGYRRIFTRFEKLDVMFLGFLSFVLIVDGLRMC
2415805..2415834                   attR                                                                                 N/A                 CCGTATGAGCTACAGACCGCAGAACAACCA
2421293..2421309                   attR                                                                                 N/A                 CCCTACACCCCTACAAT

#### region 6 ####
complement(2523294..2524661)       PHAGE_Acidia_virus_NC_029316: poly-A polymerase; ATY46_11695; phage(gi1002166894)     2.75e-17            MGNPATQDGSAIIEASVTSAFTLRVIPRDQHTISRKDISPNALRVLYRLRESGFGAYLVGGAVRDLLVGHHPKDFDVATSATPEEVKALFRNCRLIGRRFRLAHVVFGREIIEVATFRANSDDGSGDRELDNGRLVRDNVYGTIEEDAIRRDFTCNALYYAIEDFSVRDYCGGFEDVQARLMKLIGDPELRYQEDPVRMLRAVRLASKLNFEIEAGTAEPIPRLAGLLSEAAPARLFEEILKLFLSGHGVASFEGLERYGLFGALFPESAAALKSNRSGALRAMVLEGLRNTDARVANDEPVSPAFLFALLLWPAFCRTLMGLQAQGVQPEDAQRRAADRVTLHQLERVALPRRFSLPMQEIWLMQTRFSSRQRKRVLRTLSHPRFRAAFDFLVLRQCASPDHAGDVEFWSEAQKSPGQELVEAIESAQADQEGEEGAPRKRRRRRRRTGAPAGD
2524709..2524783                   tRNA                                                                                 N/A                 GCTCCCTTCGTCTAATGGTTAGGACGTGGCCCTCTCAAGGCTAAAACAGGGGTTCGAGCCCCCTAGGGAGCACCA
complement(2525277..2526197)       GTP cyclohydrolase FolE2; ATY46_11705                                                N/A                 MSATLPDVAVTEAFTLSAPLRWVGMQDIAIPVHLDAASGSGLAARASVQVDLPRAELKGIHMSRLYRLLDLHLQRPLSPAMLPQLLQALIESHADCASRAARLTLSFALMLRMPALRSEGLSGWRAYPVRIAAQCRAGRTTIQLQVEVLYASTCPCSAALSRQLLSDAFVQQHAWCDALPLQDVAQWLQDHGSYATPHSQRSVAQVCVDLPADTQGFAIQELIGLCEQALATPVQAAVRRPDEQAFARLNGANLMYVEDAARRLRKQLAEHYATFHVAVRHLESLHAHDAVAETGSDDETFFPAAL
complement(2526235..2527413)       PHAGE_Deep_s_D6E_NC_019544: lysin; ATY46_11710; phage(gi423262347)                   5.73e-14            MKRRDLLQGGAAALMLSPALAAAQGLPVLRECSVQQQGGLLRLRLELLGAQVAYRSFRLADPERLVIDLSGVSSQAPRIDPIPAGAAVTRIRSAAHLDGLRVVFDLQQPCSVNLRWEDSALVLELAPLSGGVALAASDAAPTPATAPAPAPAEPPRSRLQPYVVAIDAGHGGKDPGAVSADARYEKHVVMAVAGRLHQRLAADARYRPTMIRSDDRFVPLHERVLIAHRHSADLFVSIHADAAPTREARGASVFALSQTGASSALARWIADSENAADDMGDTARRLRVPSNPVLSQVLADLSLSGTIASSLAFGTLMLERLQQVTHLHQNQVGQAGFAVLKSPDIPSLLVETGFMSNRDDCQRLCGDTHQDELAQTLHAGIDDYFAAFPGRV
complement(2527738..2528964)       PROPHAGE_Xantho_33913: IS1478 transposase; ATY46_11715; phage(gi77747808)            3.07e-141           MASLLYLKHAYKLSDEELVERWAQNVVWQHFSGMAFYEPRLPCDATQVGRFRAAIGEAGVEELLKATIDTAVSSKAIVPAEFERLIVDTTVQEKAIAHPVDWRLMENARHKLVAAAKRAGIALKQTFAKETKTLRRKAGGYAHARQFKRLRKVLKRQRTLLGIVLREVQRKIGQASQATAPALENLHTLMQRAERIHAQQPNGKNKLYALHAPEVECIGKGKARKPYEFGVKVSVAITHKQGLMVGARSFTGTPYDGHTLHEQLEQARILSEDTAGAPKQVVVDLGFRGVDAANPGVEIIHRGTFKRLTDEQRRWLKRRQAVEPAIGHLKHDNGMDRCWLQGANGDALHAVLCAAGDNIRWLLRAMVRLGLKGLFAPMVARLIMLATVLAMSLRARHTRPHRLAWCVW
complement(2528964..2529224)       hypothetical protein; ATY46_11720                                                    N/A                 MAHTQNADFFRQPLAEMIDPRHPLAVLARRLPWAQIEAVLAPHFARISLARCAQVARWRNTICSAPRCKWPVPVLPLPAAHAFPFA
2529385..2529654                   PROPHAGE_Xantho_33913: IS1404 transposase; ATY46_11725; phage(gi21232568)            3.71e-51            MDVKKRSSEEQIIGFLREAEVGMPIKDLCRRHGFSEASYYLWRSKFGSMSVPDAKRLKDLEAENTRLKKLLAEQVFQNDLIKDALQKQW
2529648..2529944                   PROPHAGE_Xantho_33913: IS1404 transposase; ATY46_11730; phage(gi21232569)            2.93e-48            MVSAPARRALVREWIEGGASERCALAAIGMSASALRYRPREDRNVELRERILALAHRHRRYGVGMISLKLRQEGRLVNYKRVERLYCEQQLQVRRRKRK
complement(2529969..2531429)       PROPHAGE_Xantho_33913: IS1478 transposase; ATY46_11735; phage(gi77747808)            0.0                 MQGFICVFGVLELPVFVTPRSGFWQFSPMRTRRPAAEQLHADELFRSRLENQIDLRHPLVQLSHRLPWSALEQALSPRLPATTGTGGRPALPVRLIAGLLYLKHAYDLSDEAVCERWLENPYWQFFTGEVVFQTCVPCDPSSLTRWRQRLGEAGMEALLAHTINTAHAMKAVDARELSRVIVDTTVQEKAIAHPTDSRLLEVARKKLVLLAKRHGIALRQSDARQGPALRRKAGRYAHARQFKRMRKVLRRQRTILGRVLRDLQRKLAQREPSVRERIGVWLERAQRLLTQRPKDKQKLYALHAPEVECISKGKASSPYEFGVKVGIAVSARKGLIVGARSFPGNPYDGDTLAEQLEQARGLLQDVNVIPQVAIVDLGYRGRDVEGVQILHRGKAKTLTRRQWRWIKRRQAVEPVIGHLKQDCRLNRCHLEGAQGDALHVLGCAAGDNLRWLLRWIAFLRAWLQVVRARPSTCSSIMWPANMALEV
2532177..2534912                   PROPHAGE_Xylell_Temecula1: serine protease; ATY46_11740; phage(gi77747673)           9.93e-60            MNRSLLATTIASCLVLTACGGGGGGGNVRSNAPQDTIIAPAPTPPPPAADPPPKTAPAPTPAPQRYQGVGSNLLVPTNADLAQQAGAKGKGVKLAVLDDNLVQSYTPISGKVDSFNDYTASPGTPESSANALRGHGTIVSALVLGSAQDGFAGGVAPDADLFYARICAENSCGTQATRRAAVDLAAAGVRIANLSIGASYPDAAASANAALAWKYALTPLVQADALIVASTGNEGAAEASYPAATPVQEASVRNNWLAVGAINIDSAGNAAGLTSYSNHCGAAAQWCLVAPGSYTVPALAGSELGGQIAGTSFSTAAVSGVAAQVLGVYPWMTASQLQQTLLTTATDLGDPGVDALYGWGLVNAAKAIKGPGQFASDWAINVTSGYDSTFSNDISGVGSLTKSGAGKLTLSGTNTYTGGTTILDGVLSLTGSLRSDLLVANSATFEAHGGVINGNYSLVNSTGTTAIELGKALTVTGQASLKGNLLLLPEAAGYPVGSTEKIVNAGVLHGTFDRVQYANHFFWNAALSYNPTTVTATLTRNSSAASAQAAGAPQSVVNGGNQVDSLVKVLDTRVASGDTDNLGGLISATGALIAASDAQVAASLPTLAGQVHGIERTLGFQSALNDARVAADRLPYLADTTTLTTWMQGSYLDGDLSRSGFDSADYTQQATTFGVDLPMGNAGTIVGAAVTSGQDRAHIAASSSRLRSDRYAMTAYLYQPMGQAYLSAIGSYGMSNVETERNVQAGSIGERLQDRRHDTNWSARAEIGLMPHAGLSPFVAAGVVSQTQDAFSEASMTGLGLSANRDTLRAGYGEVGVRGHLAHGKWGFDGLVAYRSLLGNPNSDFSAWFTGLPEARFNVAGEPVSKQSLRASAGVRYQLNDTFSIYGNLGTERSRSDANSINANVGLRWQF

#### region 7 ####
complement(4897050..4897667)       PROPHAGE_Xantho_33913: IS1478 transposase; ATY46_22610; phage(gi77747808)            7.87e-109           MERAQRLLAQRPKDKQKLYALHAPEVECMSKGKASSPYECGVKVGIAVSARKGLIVGARSFPGHPYDGDTLAEQLEQARGLLQDVNVIPQVAIVDLGYRGRDVEGVQILHRGKAKTLTRRQWRWIKRRQAVEPVIGHLKQDCRLNRCHLKGAQGDALHVLGCAAGDNLRWLLRWIAFLRAWLQVVRARSSTPSSIMWPANMALEV
complement(4897731..4898510)       PROPHAGE_Xantho_33913: IS1478 transposase; ATY46_22615; phage(gi77747808)            4.70e-140           MQGFICVFGVLELPVFVTLRPGFWQFSPMRTRRPAAEQLPADELFRSRLENQIDVRHPLVQLSHRLPWSALEQALSPRLPATTGAGGRPALPVRLIAGLLYLKHAYDLSDEAVCERWLENPYWQFFTGEVVFQTCVPCDPSSLTRWRQRLGEAGMEALLAHTINTAHTMKAVDARKLSRVIVDTTVQEKAIAHPTDSRLLEVARKKLVLLAKRHGIALRQTDARQGPGLSRKAGRYAHARQFKRMRKVLRRQRTILGRV
4898553..4898873                   PROPHAGE_Mesorh_MAFF303099: transposase; ATY46_22620; phage(gi13475318)              6.27e-23            VLQIIVSLCHYWKTFRPRGRAVLNRSLEVRFEQYGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRSAHQSMHHLVADADWSDQALLAAVAAR
4898948..4899934                   PROPHAGE_Mesorh_MAFF303099: transposase; ATY46_22625; phage(gi13475318)              2.03e-49            MHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKTALAMDQIDSALATGMAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQPAPMPPASPKGCRPRTRPMRDSAHAPISVHEVAQSLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTRPKQTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRPRRSGPNATSPSQLDCHAGLRTG
complement(4900207..4901334)       PHAGE_Acidia_virus_NC_007409: hypothetical protein; ATY46_22630; phage(gi75750441)     6.59e-14            MQKNFFPSASAVAERDVRSSRTVIKGRGTTAYVPGRFSVTTAVEIDDGWGAVDADGETGIRPKTVVAEEVARSIISRNTSPDIGFSQSVNPYRGCEHGCVYCFARPSHAYLDLSPGLDFETRIFVKPNAAALLRAEIARPSYQCSPIALGINTDAYQPAERRLHISRQCLEVLAEARHPVSFVTKAALIERDIDVLAEMAQHNLVSVYFSVTTLDNRLAAKMEPRAAAPHARLRAMQALHTAGVPVGVLVAPVIPMINDKELERILDAAAAHGARSGGYVLLRLPQELTQLWREWLELHYPDRAKHVMSLIQQMRGGKDYDSGFGKRMVGEGPFAELIAQRFSIAYRRLGFGRLPRLDTTQFRPPRPDTPQLTLF
complement(4901298..4902170)       PHAGE_Synech_S_CAM9_NC_031922: tape measure protein; ATY46_22635; phage(gi100215)     3.83e-19            MTKNPASAGFFFAALQAQHATPSAANKRSRQDTPHQHSASPPCTVSPRRHPLAMSTTSRADPACAQCLANAAVGAPDCYGQAHTPTRLHPDRRRHHLARRLRRNRCNACARASSVQWYTANQGGYPCWHCELYPRDASADTLHRLLLWTLYLNDDFAQGETEFLFQQRKPPPRTGSLLIAPTAFTHTHRGNRQVGADKFIATSWILFQSAQALYGGESGMGNRNGGVFRCCCCFADSPFAIRHSPSCDCALYRLATLVLALQFSTRRLHRASLVRILTACRRTFSPARAR
