gi|00000000|ref|CP013710.1|  Clostridium botulinum strain F634 plasmid pRSJ2_3, complete 244784, gc%: 25.57%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
15068..15081                       attL                                                                                 N/A                 ATATCCATCATCTT
complement(15152..16279)           PHAGE_Clostr_phi3626_NC_003524: putative integrase; RSJ2_3639; phage(gi20065985)     1.60e-10            ClostridiumbotulinumMEVVKARTEEGKERYFVADDLGLPIEPILKFIRFKDNTNYARNTLRMYCQHLKLYFEYLQQRDLNFQKVTIDDLSLFVNWLQNPYKSLNVIPVTPVDMARCPRTVNIIVNTVLMFYDYILRHEQYSNNISDRLKKFVSTPNRSFKGFLYGIAYEQKKVTSNILKLKVPKSKPKTLSKQEVEMLVRACNNLRDKFLLSLLYETGMRIGEALSLWIEDIDISDMVIDIKDRGQLENNAEIKTVSSPRRIDISQNLANMFMEYISEYHNEEVETNHIFIKINGSNKNQAMNYIDVDNLFRTLKKKTGIYVTPHMFRHSSLTVLRIAGWQPELLRIRAGHKNIYTTINTYIHPSDENITREFEKTQPNLDLDIYNEGER
complement(16726..16887)           hypothetical protein; RSJ2_3640                                                      N/A                 ClostridiumbotulinumMSIPNNTKYDMQEINHQVNILLDLANEKPTNKLLKSFKSIAKKIKIITDKYAN
complement(16895..17413)           hypothetical protein; RSJ2_3641                                                      N/A                 ClostridiumbotulinumMFYSPFEFFIFAILDIILLPITIPMNLFYGFKIKKRNKKSITVKELLSQIDSEIIAKDILKILIDYKETELYGDQLNKFINNTDLLMNNIQKIKDTSKQKNTHNTNNHIITLASSWYSLSLIDLCRLLPYRIESEDKSILFILNVKIDVDVYKELTKNEVLAYIFLDYLLGA
complement(17633..17827)           putative membrane protein; RSJ2_3642                                                 N/A                 ClostridiumbotulinumMRISPVLIVTILDCIIVFVTLASYSKSKWQQNCATLTIICSFILAIILIFIPNALPGLISLFHS
complement(18036..18590)           hypothetical protein; RSJ2_3643                                                      N/A                 ClostridiumbotulinumMSVIEQFKGKSHLLQERLHELNNLLYNMQQEFIKHDLLVELTNSTTLNNGSNKLTSYDWIDEVIINGEVFTLINRAKQSYKGYVVYTKKDYNTIGLGFEYKKDIVSPHMSLGVDRILEKYNEQEILEITQLIERALIKIEEDINYLNQNKNINLHKYYYKNYDGLFEGNRNFQTISDVIADFKS
complement(18661..19071)           hypothetical protein; RSJ2_3644                                                      N/A                 ClostridiumbotulinumMVKENSINSYFKTSTFYGLKSLTKDEILIELEKNYDIYIAFKKYGIIDCKRYPFITKATFSTYEKNCIEGKKNEEEKLQARENLKIVEDYFNSRHSKHAEPLRVTFAERRDNECALYNPDRFNNKSIQERLIEIFI
complement(19286..19669)           hypothetical protein; RSJ2_3645                                                      N/A                 ClostridiumbotulinumMKDLKLPIMSDETKQKAWNNLKPNDKLVCIERCGIGLDDYYIKYFTIVKKTPKGNIRLDNGELLKRLYSDYYIVTDELLECISKIQLEESVMSLLYEVGRNKRGFKSNLEYKDAIKLKGLLEKILNK
complement(19735..20049)           hypothetical protein; RSJ2_3646                                                      N/A                 ClostridiumbotulinumMDKTKIAKKIIRYRHHNATFYKLDKYLKITKLKIIKLELIESENGANLYNVVYKGGINLWSPFTWIIVLIPSLIISIWEAIKEVVEDMSSFKTDTFSETIKIKD
complement(20139..20402)           hypothetical protein; RSJ2_3647                                                      N/A                 ClostridiumbotulinumMKIEASVLIILLTVAFVRQCIWSNTPKVNKFKDLKYGLVRFKLNHKLMIGILCDKRGGIFKPMEYSILLKDNSLIWIDAKNLLVKQY
complement(20941..21369)           hypothetical protein; RSJ2_3648                                                      N/A                 ClostridiumbotulinumMIKNSKDCDVNLTNPKYEIYEYIRNNNLVEIKDKPEIKQPQIDFGYGKIIIEVLDSLNKANKENKIYNKDELFHLILENIKLSKSFIKSFDSTEEERIMNIRVKHRAMYYLDIIFGNCNNYLTICKALGKGKEYQENYYYNI
complement(22102..23190)           PHAGE_Clostr_phiCD211_NC_029048: Cell surface protein (fragment); RSJ2_3649; phage(gi981220894)     5.96e-20            ClostridiumbotulinumMLKKNKKILSVITATLVMVIGISFTNVQAASIKRMNGKNRIDTANKTAKEIFQKSEAVILVNGTGYADAVSSAPLSKLLNAPILLTENKGTLESDVLKTINDLQNVKKIYIVGGTGVVSTTIENSLKSKGFQVIRYDGQKYGDKTRYGTNARVAEEILKLSPKSKTGILVNGQDGYADALSVASVAATNGYPVLFGNTKNVPNVIKNNIISKNKLQILAVGGSGVLPSSVVSSVNGKKITSDVQSKNRFQTNLAVLEYFKGKGGLDFSNVYIAAGGQGGKAGQGQFADALVASAAAAKTGSPLVLSGLGAGTTEIANVEKFVETNIEDEGNLVIVGGSASVSDSIEKKLYEKVGDFTIVDVS
complement(23382..23513)           hypothetical protein; RSJ2_3650                                                      N/A                 ClostridiumbotulinumMELKLSCFKFGSTKFEYEPIKCLKVDNNYYLMHEDVKEQQMKC
complement(23617..23706)           hypothetical protein; RSJ2_3651                                                      N/A                 ClostridiumbotulinumMAKCLKCGTVYCVYEGSEGSECLNIKVRI
complement(23747..24007)           hypothetical protein; RSJ2_3652                                                      N/A                 ClostridiumbotulinumMTKKIRMIMTQIIEYEPDINNYCDAKTYEDMADIDAHTDDIGALFDTEDAELNITWEIIERSEDGDYGLCNSKEHWKRTGKGTKIE
complement(24110..24361)           hypothetical protein; RSJ2_3653                                                      N/A                 ClostridiumbotulinumMEGYKVKEKLPMLSELLIQFKDYDIGVQYFNIEFAMEMREDVGWCGMATINGETILTSGYETPIKAVLEYIKVLKEKRGDFKT
complement(24378..24791)           hypothetical protein; RSJ2_3654                                                      N/A                 ClostridiumbotulinumMRALSNSKYNYYELLQDFGFLEKGAIFYHDKNDNMYGSVVEGCLKLCWTPNGNCYSGLCGDTIFLHYNFAKDKDVFRKLEPPNKPSRVDDNINWEYLIVALNFRIKELEDKEMFGRELEIAKKELRKVLIQQQNSNK
complement(25015..25329)           hypothetical protein; RSJ2_3655                                                      N/A                 ClostridiumbotulinumMEKEIEKMNEFKNIIIENPNLPIRFFIGEDGNCGECNYEENSINDVIVDSLTLYEGRYYNEEDFGEELYGYLYNEFESEEKLNKHIDEIIKSKNFEKAICVFIG
complement(25496..26521)           PHAGE_Clostr_phiMMP02_NC_019421: hypothetical protein; RSJ2_3656; phage(gi414090433)     4.31e-29            ClostridiumbotulinumMEYIKEVNINEAIIHILDSNANSPILNEYKLGLDDENYKFILKHVEKCLKDQQLRYAKFNNERNIVKEISQEYLNGQNDLLIISKELAKQLFTLMKSNDNIESCDLMIVSISTEYGPMLGILKMDYIKNYIHVIDTVENKIGINIAPEFTGLPMTASKIKKCAFIKPIREGQEFNLMLIDKQKKSKDSEEYGSNYFIKNYLGCNVIENERDMTRQLVENTDKFIKDNIDDVKTAVKTKDLLREKLKKEDTINIEDITDEIFKDETLKQEFINFNYENNIDKPLEVDKEFVTKIVNTLKFKLNKNITLSIPEDIYSDINSFEVRDNGDGTANFIIKDVCTIQ
complement(26612..26953)           hypothetical protein; RSJ2_3657                                                      N/A                 ClostridiumbotulinumMYMTLEDRFREDRFRFLFGIILIAALFSGSTLIMLEINNKYWEYNTSYTVNTSNKIYNIKAKRIPETSDVEVTVSANGLKEKKSKIYKANRKSNEEITQQVISIANSTIAKCN
complement(27082..27471)           hypothetical protein; RSJ2_3658                                                      N/A                 ClostridiumbotulinumMNKIIKYIIPIILISILSLVSLISIYKASINKSEGLLIIIRDAQLLYISDSSLETKYLKESDRIYKKSLSLSNDLERIKYTSLISQIFTMPYKSIKIDSEVEKLASKSRKLGETIRYKEALKIRNSTSN
complement(27531..27761)           PHAGE_Bacill_Grass_NC_022771: hypothetical protein; RSJ2_3659; phage(gi568191704)     4.72e-17            ClostridiumbotulinumMIEIILKSNVTERVIKSTYTGQQLLEMNEEEIVDEMTKCDCKPIGETNTVECNCYEEWEDYTLIVGNENNYNNIED
complement(27849..28472)           PHAGE_Bacill_Gamma_NC_007458: conserved phage protein; RSJ2_3660; phage(gi77020171)     1.14e-14            ClostridiumbotulinumMHFGNKIIIHNSKIISRNEIIIKEEGNKKMRVIDADKLFQEIKRNDLEFMQQANLMICLKNIIDRQPTISKPVDITDNNIEGKWMYSLIDSEIWIGEEFNTKEQAIEAGRKEALENQEQAFCNDYFNIGQIVEVSPCGVDVDFMLENVAENTADGMEAGENYLMDVDTEHQRELEEQLNEVLFAWMDKYDYRPDFFKIENIEKIDLK
complement(28456..28638)           hypothetical protein; RSJ2_3661                                                      N/A                 ClostridiumbotulinumMKLSEIIKEIEEKQGIKDYYLHREYCTGKLELTIEFNNDIADKMLKENNIEEIKPCAFWE
complement(28669..28899)           putative glutamate racemase; RSJ2_3662                                               N/A                 ClostridiumbotulinumMKVVLVKENNKVRVLEGKGTITSTLLAMRSRLTSGDIQYYELDFDTSLGMGIDAYVEALNQCPELLEKSRLITKIQ
complement(28961..29176)           hypothetical protein; RSJ2_3663                                                      N/A                 ClostridiumbotulinumMKKCPVCKTDIKEIEPGVYKCLCGYREIQADEESAVEIRLYNHKTSQVFYKNLTVNEIMQIDNILKGIEWE
complement(29397..30185)           PHAGE_Paenib_PG1_NC_021558: hypothetical protein; RSJ2_3664; phage(gi514231233)      3.46e-09            ClostridiumbotulinumMDIKELTQKAYQNSNEKGLYLLSYNWHNHVYGEEWAVFLGNKECKNGYSSDLRLARRFTEEEITKYKNSDYIPIPLDLLGISEIYEREDTFNKNIKVLIEKERLNKLLGLTKCMPITILGEKLYTLKDIEFNENIRISRLRTDIRNGILVTSGKKLLGTYYVTQKELDKYLKVVKKQIEVTEEQLDEMKHALGLSYGKKPYRNRFYSSTSDKKWNDLVTKDLAEKDFNSENKNCYFWLSKLGVAFILGKSITIKKYNNLSSL
complement(30285..30740)           hypothetical protein; RSJ2_3665                                                      N/A                 ClostridiumbotulinumMNSREILTIIKKYDLDKEDLDTIEGFLKNCSNNIREIKNILELLGYDYIYKDILNNKKSKLKLNRFQKKMYYRKLNHLRKIKRYMPSWVYGIDFESGKINYWDRHYINDKYLKRCSNKKIRHIEIGEEDFNLKGCSYKQKFNYWGEISDRI
complement(31124..32566)           PHAGE_Geobac_E3_NC_029073: transposase; RSJ2_3666; phage(gi985758491)                0.0                 ClostridiumbotulinumMANYVLTLPLKTEKWQEDILEKRLNIARQIYNACLGEILSRYRVMQRQKQYGHAMKMEKGKKRNAIFNKLRKDFGVTKFDLNKFVKPMGQKFKKNLGSQMVQEIAERSFSAFEKLMFKEAKKVRFKAYGEFHSVREKGNITGFRYFEDRNVMKWLGLTIPVIIKRNDEYANQCFLDKLKFCKLVKKVIRDKNRYFVQMTFEGVPPQKNNRKVSTDENSRVGLDIGTSTLAIASEKEVKILELEEDVNIDERIRRVLQRKLDRQRRANNPNKYNKDGTIKKGNHDKWIQSKGYIKTKLALREIQRKIADKRKQSHNKLADYILSLGLDVRVETMNFKGLQKRSKGTTVNDKTGKINRKKRFGKSLGNKAPGMLITIIDRKLQYQGFSIKEIDTYEVKASQFEHFTKTYVKKPLSKRWNKFEQGNIQRDMYSAFLIMNTKDNLKEIDVDRANATFENFFKLHNKEIDRIKSLNKKQLSSIGL
complement(32591..32830)           PHAGE_Hypert_2_NC_014321: IS element Dka2 orfA; RSJ2_3667; phage(gi300116744)        8.25e-15            ClostridiumbotulinumMETDKDHIHLLIECTPQHYIPNILKSLKGISARRMFQLHPELKNRLWGGHMWSPSYFALTVSKNTEEQIRKCIETQQKK
complement(32990..33547)           PHAGE_Bacill_G_NC_023719: gp219; RSJ2_3668; phage(gi593777675)                       3.56e-29            ClostridiumbotulinumMIIPHSNSKKYNIIKLSNEILEYIKYEENIVFICIGTDRSTGDSLGPLVGTFLTKANCCYPVYGTLKNPVHAKNLKETVSVINSKYKDPYIIAIDACLGNENNIGNIEIKNKPLTPGSALNKNLPSVGDISITGIVNLSGNGIEFIVLQNTRLYEVYIMSEIISKGIMKATKKKVKQEYKTMKTI
33893..34699                       PHAGE_Serrat_BF_NC_041917: hypothetical protein; RSJ2_3669; phage(gi100349)          7.26e-07            ClostridiumbotulinumMIGSIIGDIVGSSYELMNTNKKDFNLYRKISRFTDDTVLTIAIADCLLREGNFKDFYRTHTLKYPLRGYGSKFLVWAYFNKKNPNYSFGNGGAMRVAPIAYISNDLYTVLEITEKSCIATHNHPEGIKGAKAIAACIYLARQNCSKEEIKQYIENEYKYNLNISVEEFHSKYRSNATCQNSIPQAIVAFLESTDFESCLRNAIYIGGDSDTVACMACGIAEAYYKEIPYDIFEFCFRKLNNNQKSIIKDFYNKYIVSSTITNKINDLV
complement(34981..36705)           PHAGE_Acidia_virus_NC_029316: AAA+ ATPase; RSJ2_3670; phage(gi1002166819)            3.57e-33            ClostridiumbotulinumMKIKININIYVICILIVISILIPTLKSYAVNLNATKTSYNVFIKQMKNNEIKKIHIDFKDDNFVFINNKNNKYITDNPKTNDFKKELLQYNIEINEMHKQNLIQSLKEIIFILFGILMISQIKSIYNKSEIKNKRIDSDTSKNGISFKDIAGLKQVKKDMHLLVEFLKDPEKFTHKGAKLPKGAILYGEPGTGKTLLAKALAGEANVPFFSINGSDFIEMFAGMGAMRVRSLFEEARENAPCIIFIDEIDAIGRKRDVDLDNSEYRQTLNALLAEMDGFNGSEGVLVIAATNRIEDLDQALLRPGRFDKHISVSLPSTPEERLEIIGIYSKNKCFNKEVDFTNLAKQTIGFSPAQIESLINEAVLISIQYNKDNIDTECIDKAMYKILLKGHAKEDEKRDKDDIRLVAWHEAGHALIGKLTGMDIPKVTITPSTSGAGGVTMIVPKKMSLYSIQELKNKVKLAYGGRIGELLLLGDKNKVTTGASADIQQATEIIKQMIVQYGMDDEFGMLNLYQLDVDNNIILDEARKLSKSIYEETYNLLKNNIDILKSIAELLMEKETICEKDLDNIINQY
47071..47084                       attR                                                                                 N/A                 ATATCCATCATCTT
