gi|00000000|ref|CP013726.1|  Weissella cibaria strain CMS2, complete genome. 2342914, gc%: 45.32%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1963310..1963321                   attL                                                                                 N/A                 TTCACAAGTTGT
complement(1963439..1964233)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; AUC63_01842; phage(gi48697274)     3.88e-37            MGHRITSVLSALNIARSTYYQWKNWQPSQRETRRTALKTAIKAVYNTNRGIYGYRRIAAFLRFILKTDVGDRLVWELMNELNLKSRMVKKSYKKPTTTTDTPQKPNLMKKLDDLSGVLATDITYIQLMNREWVYLATVYDPEKRRVVSYGLSPEMTKEFATSVVVKALRANGKPKMIHSDMGSQYTSSLFEGTLQNSGINHSYSRKGHPYDNARIESFHSLIKREMIYHEEYRTIDDVRVSVEWYVNWYNNSRINSRTDWLQTA
complement(1964281..1964541)       PHAGE_Bacter_Diva_NC_028788: transposase; AUC63_01843; phage(gi971743573)            1.42e-09            MIRYSPEFKQSLVEMHNQGRSYTELAAEYGPSADSIRNWVKLYTVHEVDGEKWTQADVNALQKENAKLREELEILKRAAVLLSKYN
complement(1964568..1965689)       PHAGE_Entero_phiFL2A_NC_013643: portal protein; AUC63_01844; phage(gi281416526)      3.01e-134           MSIDFLRKGRFNPNANDVFFMNADDYAIMDPAAEGFINQLDRFINRHKSSQVNRLKALKRYYLADNDIRYKEPKSDKTAADNRIASDFARYITIFEQSYMLGKPVVYKNASDKTLQEEVDDFSKQNNESYHNVLIKTDLSIYGRAYELLYVDGDENNVQVRLARLNPEQVFVVYDDTVQRNSLFAVRYYRVRYEEGKFRDFVEVYTNDKVYYYRNDNQEAGGMKFVEETTHEFNGVPVTEYASNEDRTGAYEAVLDTIDAYDLAQSELANTQEDFNNALLMIKGNPFTGSDDNPVIVDDSGTERPNPNFIGNVVAQMKQARLLIMDDNPDENGAEPGAEYLTKSYDSDGTKAYIDRLAGCSYARFTDRFFSAL
complement(1965698..1966978)       PHAGE_Lactob_Lj928_NC_005354: hypothetical protein; AUC63_01845; phage(gi41179314)     6.63e-170           MSKNEQLTLEFPKPARVFNKQVFDYLYDYDSRVDLWYGGASSGKSAGVVQKVILKALGDWKIPRRFLILRKVGATVKDSIFEDFISRLTEWGLMPYAKVRNTDYRIKLSNGAEFIFKGLDNPEKIKSVKGISDVMMEEATEFTLDDFNQLDLRLRERKHPQKQIFIMFNPVSKANWVYKQFFERTDPDTKIHLSTYKDNKFLDDANRRRIEQLSETNGAYYKIYALGEFATLDKLIFPKYEKRLLRADSDELKGVPSYFGLDFGYTNDPTAFVHIKLDVENKVLYILEATGKTGMLNGEIAQMIKDLGHSKETIIADAAEPKSIAEIRKAGIDRITKARKGPDSIRHGIEYLQQFKIVVDERLFQVIEELDNYTWQKDKKTGEYINKPVDSFNHFLDAVRYAADKQSLKSADSFEQKLIKARTYFG
complement(1966971..1967393)       PHAGE_Thermu_OH2_NC_021784: terminase small subunit; AUC63_01846; phage(gi526118336)     1.00e-19            MSLNERQERFVDEWVRNGGNGAQAAREAGYSARTARSIAQRLLTNVDVKEAIQARQAELREQRRMTTDNVIEFFEKVVQGEIGEQEVTPSGKVIEVPTKVNNRIKAAENLGKVLGIFQAESVVEVKPIVVMGDYTEDEDE
complement(1967461..1967542)       tRNA                                                                                 N/A                 GCCGATATGGCGGAACTGGCATACGCAGCGGACTTAAAATCCGTCCCTTAATTGGTTGTGGGTTCGAATCCCACTATCGGCA
complement(1967632..1967705)       tRNA                                                                                 N/A                 GTTCCTTTAGCTCAGTTGGTTAGAGCAGACGGCTCATAACCGTCCGGTCACTGGTTCGAGACCAGTAGGGAACA
complement(1968492..1968905)       PHAGE_Lactob_Lj928_NC_005354: hypothetical protein; AUC63_01849; phage(gi41179310)     1.41e-06            MALLPAVNEKATREAVRDFFDSEWPRIVNMADMGYVDLKSVEISDMPSARSFGNANDERFTNHTDAVYYYDAVVHAIKVMTQPHRHFMWLRYVRHLEWLQVEALTGYSTRRGQEIIDEAFLLFADKFADVDDLRVKE
1978342..1978353                   attR                                                                                 N/A                 TTCACAAGTTGT

#### region 2 ####
1957390..1957401                   attL                                                                                 N/A                 ACTAGCTTACCA
complement(1971455..1972180)       PHAGE_Lactob_LF1_NC_019486: DNA replication protein; AUC63_01858; phage(gi418489432)     1.92e-27            MNTTSDWVRELRQRGLTPKTLTPEERAEKEKADAERITKAWQAQERVKYQRMSLWGETETRSFEFEDWNPQIQRNEQTARDIGNQAYAMTNEMRNGLFNVFLFGRAGAGKTSLALAMMSRLSDRYTTMFVSVVEWRNLKFKSFKDNKVAERLNLTEKFMREVEVLVLDDFGKETQAEAKETVSSMLFELADARRGKATIITSNDDLTGLALKYDQAVLSRLITKDIKHIITTNKLDDVRKV
complement(1972180..1972980)       PHAGE_Lactob_LF1_NC_019486: DNA replication protein; AUC63_01859; phage(gi418489431)     9.59e-51            MAQRRMLSKKVTDTDAFLDMPLSTQALYFHLNMHADDDGFVGNINTIKRMIGASTDDEKLLLAKQFLIPFEDSGVVVIKDWRIHNYIRKDTYNATMYSEERRKLGVSESGSYYVDEPSTERPRIVDDTATQVRVGKVSIGKSKVSEGKVSENTTDQPTGPLRNQLADLVAMHGFADHLTPLQLNQLLEYVTEDGMEIGVLNLALQDASNRAIRNFKYVDAILRAKLNEGVKSVADWHAGKETHKQAVADEKVPDWMQELNDKLEGS
complement(1972943..1973653)       PHAGE_Brocho_NF5_NC_015252: gp49; AUC63_01860; phage(gi327197634)                    8.22e-44            MNFIGKITEINGRYVTVKVDDSLSLGLINSVNDDEHPEVDVTVVDKRLISPVQRRKTYAILRDMSDFFGYTLDEMKNVMKGLFYETMDAHEFSLGNTDITTARTFISFLLEFALKYHIPMRKPALEYQDDLDVYMYQSLKNRSCVICGLAADVHHVDTVGMGNDRRTVDHREKHLIALCRAHHNEAHNIGWPVFAQKYHVKGIKLDPETLQRLGIMTFKRMEEIDGTTTNVKQESY
complement(1973667..1974512)       hypothetical protein; AUC63_01861                                                    N/A                 MDFAERMRKNERISTNNSVLPPFPGMFLAFNASEGKFSIMEPGADFSEANDIKSITILPHFMMNRVKWTRGTDEKALSNYVVTDTEERQPYVITIDGETYTAETMMELKQQIVLGQNEQLKQEEIYVGYATALDDVPQKKPLVVWYVSRGVNAYVLNDAIDGDLTGRSIIKLENKGTTRKNNSGSINKVLDFKVDEIAEDKVEGMLKWVSQDSSDKIVEAYRDDMINAAMTTSNPAPTVLGTQQNSEDDVPDVPPFNGTPALDPFGQPINEVGISDDELPF
complement(1974523..1975449)       PHAGE_Lactob_Lj928_NC_005354: putative replication protein; AUC63_01862; phage(gi41179303)     2.10e-22            MNELVVNPANVTPAIVEVTGVDELEQYVDGMLATYKKTPVSAATLAQAKQARTDLNKAYKGLGETRRNIADKVAGNWPDTEKRLKEIEKKIQSVSDGTLKPQIDEVVEADKQDRKTLILIEIEKIATEYNLPAEKIQFDDKWLNKTAKWAETEQTVRSQFENIKNEVQVRELQTSAVEAYAAELQMDPAGVAGYVGQLDYKDLDEVKASMKKDVRLAKARFAAERARAQADFDAKVKRAEQATKIGNKLVDQETGEIIEEPEALKRTYIIQLSDITDQQFAYVEQFIHNKFDKGFEASGVTYKSAVQR
complement(1975446..1975541)       hypothetical protein; AUC63_01863                                                    N/A                 MFDELIDPPDDPEDNEEAFNNYMDEYEDKDL
complement(1975534..1975677)       hypothetical protein; AUC63_01864                                                    N/A                 MKNELRVEALRHMNRAFKAEQRDNNDGTVSEFETGVADVLNWVADHV
complement(1975758..1976285)       hypothetical protein; AUC63_01865                                                    N/A                 MDYKGPTGVGNIHYNFAKPVKFDVEAEKERIRKSGVERPNKALPEYERRYRRFAKFLSDYMVGKNADERDDLVSQASQVSGLSFITASNSRYLGRFLRERSEAELEGTPFNKPNITSAVGYEDRYKTFKRAMDSKRPEQSFSYIATPIAKQLRMSLASLYNTKYKGRYDKENKNA
complement(1976275..1976463)       hypothetical protein; AUC63_01866                                                    N/A                 MKISDYQMVRNFAEGRGFFNYEVQTLPVGGVRVGFKTKRGGQVWFDDKQEVIDYVLEATNGL
complement(1976453..1976677)       hypothetical protein; AUC63_01867                                                    N/A                 MWIIDALKLVGWQALQATLLFVAAGWLVIANRVRLAWFLKGILRMVVYPFVFLANGYDAAEALKPTGKLVRYED
complement(1976727..1976960)       hypothetical protein; AUC63_01868                                                    N/A                 MARFSEEKATIDELEQLRVVGQVGARRILGRSLWYFKEHIRYSKKFMQNVPNKTPGAYKPTYLVSDVLRYRKLNDWW
complement(1976963..1977172)       PHAGE_Clostr_phiMMP01_NC_028883: putative repressor; AUC63_01869; phage(gi971820019)     2.72e-05            MSLGNFINMVLKNKGLTNYWLSGVTGIDKTTLYSLKVGKLRTLTLRNMIKVAIALDIDLNELKKIDWED
1977293..1977571                   PHAGE_Clostr_vB_CpeS_CP51_NC_021325: hypothetical protein; AUC63_01870; phage(gi509140075)     1.36e-22            MPKPYIITYDLNEPGKKYDDVAAAIKSSARTWTHYLESTFIITSDLSADQIQKNIKPYLDNNDALFISELAANNHQGWLNRDQWDYLREHVF
complement(1977568..1977786)       hypothetical protein; AUC63_01871                                                    N/A                 MKNKTVKVENVHVEGLDELKKLSQDLLEQAEQLSNTIERFNQLKLIISTRNDRFIPEDNDGIKCGNPVSKNF
complement(1977789..1978526)       PHAGE_Lactob_LL_H_NC_009554: hypothetical protein; AUC63_01872; phage(gi148750866)     9.42e-44            MTNEVQVFNGLKIKEVNGQVMFEAESAATGLGLTKISKGQQYVRWERVNEYLGLSTSGQLVKRGDFITEPQFYKLAIKANNDTAERFQDWVTTEVLPSIRKTGSYQAKPMTEMEIVAATANKLVQQEKQLTQIVERQNTTEMQVAELKNEFGLPAKVAGKLKKLGASRVYFWLGGKDTNAYREVSAKVFSEMWRDFKNHFGELDSYTSLPMDQLQAGRDYIRNWRPSTNTVMDIERLNAQMELEV
complement(1978537..1978764)       hypothetical protein; AUC63_01873                                                    N/A                 MTATTIEEQENALKRKIKKRINDEMWERDDMKQWELAEMIGEGVSQTNRAINGETSPKSKTIRNKIFTLFNITDL
1978851..1979060                   hypothetical protein; AUC63_01874                                                    N/A                 MSNIADRIVDFVQSKQPDENRYMSVHLSNGDSVSFSSVLSYENDVLVIKAEKRTHFVDANSIVDFVVHD
complement(1979057..1979185)       hypothetical protein; AUC63_01875                                                    N/A                 MSSETLEVIETLIVEIAKAPETKTSSEMVTAISELVAAINQY
1979443..1979784                   PHAGE_Lactoc_bIL310_NC_002669: immunity repressor; AUC63_01876; phage(gi13095874)     2.75e-17            MTVYERIKEISKTRGMSLQQVAKSAGLSQNMIYQYKNVNPKAETLQTLADVLGVSVDYLLGNSDNMHPVDKTDERDGDLKDYFEKHPILQYDGNPIPEAELKIIRRILEDMDD
1979777..1980184                   PHAGE_Lactob_LF1_NC_019486: Lj965 prophage repressor-like protein; AUC63_01877; phage(gi418489418)     1.05e-11            MTDLLNYLLFIAIRNDIKVEFTDLLSPSTPDLSIPSERKIIINENSSIGVHVTFRFAHELAHILFGNDNQDYVYQFSIGTKKESERKAHKRALRIISRFVYNETPMEYRNYVDFMNAFNLPSSFENWAKDAIKAA
1980237..1980854                   SmpA / OmlA family protein; AUC63_01878                                              N/A                 MNLFTKYIGIGAVAVLVGSTALQAIPQVGNNHFVTVASASSKSKIKKVKLGMTKKQVKKILGKPDRDDSGMLTYEKYGYLYFSKGKLTGGEDKNIQAQVTKKNAAKKSSKVNKRQTLLSQAKYFGTKDVESIQKATYAYASTEIDGGMMYMWKSKAGKLIRVDLDEYGKTAVYKYDDSKDNGLGEQLYIGKTILQKKPRTTVVYP
1981233..1981508                   hypothetical protein; AUC63_01879                                                    N/A                 MEDKKSLVLIGRIASVMSVLMYVSYIPQILDNLSGHSGDPIQPFVAMLNCIFWTIHGLFGSDGHTRDMPIVIANIPGILFGFTAFITVFIH
1981518..1981883                   Pyrimidine dimer DNA glycosylase; AUC63_01880                                        N/A                 MRLWHESLIPKLPRQQLLGQHRECCALRGGGWGKKHATVNYVFDHSPYKLFQYHELVMNEMLSRGYTPNELWLDPLYRGTKEAAYTSLSSEVLTSPIYPEHDNIYLIECIENLREKGINIE
complement(1981919..1982119)       PHAGE_Entero_EFC_1_NC_025453: hypothetical protein; AUC63_01881; phage(gi725950514)     1.97e-24            MNFGMRKPSPMRSIKARTTGKAKRAVKQAIIPGYGQKGMGWLTDTKKEAYNKVYKKTTFSIFDLFK
1982322..1983413                   PHAGE_Oenoco_phiS11_NC_023571: Phage integrase; AUC63_01882; phage(gi589286605)      9.78e-46            MAVYKTEHGWRADFSFKDASGKYRKKSKRGFKTKKEAEAWLAEYSINHGKPTLQKGSQILFTDYFDEYAKLHLETGMKEATYESWRFQKKIVVDVYFTGLTLDQITRPMYQSFLNHYAIGKKRQTVSKRHRLLRLVINQAFHDGLIQSDPTFGVTIPGSDSKDASEKFLQLDELTTLIEYIENDEKLITWRTGFMVYLISLSGLRAGEALALTKNDIDSDARTINVSKTKQLSGAVTTPKTKTSNRTIVMPNRFFDSYQKFIDAKEHWNSANELFDGRRTPSVVNRWLERLEKKLGFENIISLHGLRHSHVSYLLSSGVDISYASKRLGHSNISITQDTYAHLLQHKQQSEEDKTITLLDQLD
1995686..1995697                   attR                                                                                 N/A                 ACTAGCTTACCA
