gi|00000000|ref|CP013726.1|  Weissella cibaria strain CMS2, complete genome. 2342914, gc%: 45.32%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1963310..1963321                   attL                                                                                 N/A                 TTCACAAGTTGT
complement(1963439..1964233)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; AUC63_01842; phage(gi48697274)     4.51e-37            WeissellacibariaMGHRITSVLSALNIARSTYYQWKNWQPSQRETRRTALKTAIKAVYNTNRGIYGYRRIAAFLRFILKTDVGDRLVWELMNELNLKSRMVKKSYKKPTTTTDTPQKPNLMKKLDDLSGVLATDITYIQLMNREWVYLATVYDPEKRRVVSYGLSPEMTKEFATSVVVKALRANGKPKMIHSDMGSQYTSSLFEGTLQNSGINHSYSRKGHPYDNARIESFHSLIKREMIYHEEYRTIDDVRVSVEWYVNWYNNSRINSRTDWLQTA
complement(1964281..1964541)       PHAGE_Paenib_Shelly_NC_041909: membrane-associated initiation of head vertex; AUC63_01843; phage(gi100034)     1.65e-09            WeissellacibariaMIRYSPEFKQSLVEMHNQGRSYTELAAEYGPSADSIRNWVKLYTVHEVDGEKWTQADVNALQKENAKLREELEILKRAAVLLSKYN
complement(1964568..1965689)       PHAGE_Entero_phiFL2A_NC_013643: portal protein; AUC63_01844; phage(gi281416526)      3.49e-134           WeissellacibariaMSIDFLRKGRFNPNANDVFFMNADDYAIMDPAAEGFINQLDRFINRHKSSQVNRLKALKRYYLADNDIRYKEPKSDKTAADNRIASDFARYITIFEQSYMLGKPVVYKNASDKTLQEEVDDFSKQNNESYHNVLIKTDLSIYGRAYELLYVDGDENNVQVRLARLNPEQVFVVYDDTVQRNSLFAVRYYRVRYEEGKFRDFVEVYTNDKVYYYRNDNQEAGGMKFVEETTHEFNGVPVTEYASNEDRTGAYEAVLDTIDAYDLAQSELANTQEDFNNALLMIKGNPFTGSDDNPVIVDDSGTERPNPNFIGNVVAQMKQARLLIMDDNPDENGAEPGAEYLTKSYDSDGTKAYIDRLAGCSYARFTDRFFSAL
complement(1965698..1966978)       PHAGE_Lactob_Lj928_NC_005354: hypothetical protein; AUC63_01845; phage(gi41179314)     7.70e-170           WeissellacibariaMSKNEQLTLEFPKPARVFNKQVFDYLYDYDSRVDLWYGGASSGKSAGVVQKVILKALGDWKIPRRFLILRKVGATVKDSIFEDFISRLTEWGLMPYAKVRNTDYRIKLSNGAEFIFKGLDNPEKIKSVKGISDVMMEEATEFTLDDFNQLDLRLRERKHPQKQIFIMFNPVSKANWVYKQFFERTDPDTKIHLSTYKDNKFLDDANRRRIEQLSETNGAYYKIYALGEFATLDKLIFPKYEKRLLRADSDELKGVPSYFGLDFGYTNDPTAFVHIKLDVENKVLYILEATGKTGMLNGEIAQMIKDLGHSKETIIADAAEPKSIAEIRKAGIDRITKARKGPDSIRHGIEYLQQFKIVVDERLFQVIEELDNYTWQKDKKTGEYINKPVDSFNHFLDAVRYAADKQSLKSADSFEQKLIKARTYFG
complement(1966971..1967393)       PHAGE_Thermu_OH2_NC_021784: terminase small subunit; AUC63_01846; phage(gi526118336)     1.17e-19            WeissellacibariaMSLNERQERFVDEWVRNGGNGAQAAREAGYSARTARSIAQRLLTNVDVKEAIQARQAELREQRRMTTDNVIEFFEKVVQGEIGEQEVTPSGKVIEVPTKVNNRIKAAENLGKVLGIFQAESVVEVKPIVVMGDYTEDEDE
complement(1967461..1967542)       tRNA                                                                                 N/A                 GCCGATATGGCGGAACTGGCATACGCAGCGGACTTAAAATCCGTCCCTTAATTGGTTGTGGGTTCGAATCCCACTATCGGCA
complement(1967632..1967705)       tRNA                                                                                 N/A                 GTTCCTTTAGCTCAGTTGGTTAGAGCAGACGGCTCATAACCGTCCGGTCACTGGTTCGAGACCAGTAGGGAACA
complement(1968492..1968905)       PHAGE_Lactob_Lj928_NC_005354: hypothetical protein; AUC63_01849; phage(gi41179310)     1.64e-06            WeissellacibariaMALLPAVNEKATREAVRDFFDSEWPRIVNMADMGYVDLKSVEISDMPSARSFGNANDERFTNHTDAVYYYDAVVHAIKVMTQPHRHFMWLRYVRHLEWLQVEALTGYSTRRGQEIIDEAFLLFADKFADVDDLRVKE
1978342..1978353                   attR                                                                                 N/A                 TTCACAAGTTGT

#### region 2 ####
1957390..1957401                   attL                                                                                 N/A                 ACTAGCTTACCA
complement(1971455..1972180)       PHAGE_Lactob_LF1_NC_019486: DNA replication protein; AUC63_01858; phage(gi418489432)     2.23e-27            WeissellacibariaMNTTSDWVRELRQRGLTPKTLTPEERAEKEKADAERITKAWQAQERVKYQRMSLWGETETRSFEFEDWNPQIQRNEQTARDIGNQAYAMTNEMRNGLFNVFLFGRAGAGKTSLALAMMSRLSDRYTTMFVSVVEWRNLKFKSFKDNKVAERLNLTEKFMREVEVLVLDDFGKETQAEAKETVSSMLFELADARRGKATIITSNDDLTGLALKYDQAVLSRLITKDIKHIITTNKLDDVRKV
complement(1972180..1972980)       PHAGE_Lactob_LF1_NC_019486: DNA replication protein; AUC63_01859; phage(gi418489431)     1.11e-50            WeissellacibariaMAQRRMLSKKVTDTDAFLDMPLSTQALYFHLNMHADDDGFVGNINTIKRMIGASTDDEKLLLAKQFLIPFEDSGVVVIKDWRIHNYIRKDTYNATMYSEERRKLGVSESGSYYVDEPSTERPRIVDDTATQVRVGKVSIGKSKVSEGKVSENTTDQPTGPLRNQLADLVAMHGFADHLTPLQLNQLLEYVTEDGMEIGVLNLALQDASNRAIRNFKYVDAILRAKLNEGVKSVADWHAGKETHKQAVADEKVPDWMQELNDKLEGS
complement(1972943..1973653)       PHAGE_Brocho_NF5_NC_015252: gp49; AUC63_01860; phage(gi327197634)                    9.55e-44            WeissellacibariaMNFIGKITEINGRYVTVKVDDSLSLGLINSVNDDEHPEVDVTVVDKRLISPVQRRKTYAILRDMSDFFGYTLDEMKNVMKGLFYETMDAHEFSLGNTDITTARTFISFLLEFALKYHIPMRKPALEYQDDLDVYMYQSLKNRSCVICGLAADVHHVDTVGMGNDRRTVDHREKHLIALCRAHHNEAHNIGWPVFAQKYHVKGIKLDPETLQRLGIMTFKRMEEIDGTTTNVKQESY
complement(1973667..1974512)       hypothetical protein; AUC63_01861                                                    N/A                 WeissellacibariaMDFAERMRKNERISTNNSVLPPFPGMFLAFNASEGKFSIMEPGADFSEANDIKSITILPHFMMNRVKWTRGTDEKALSNYVVTDTEERQPYVITIDGETYTAETMMELKQQIVLGQNEQLKQEEIYVGYATALDDVPQKKPLVVWYVSRGVNAYVLNDAIDGDLTGRSIIKLENKGTTRKNNSGSINKVLDFKVDEIAEDKVEGMLKWVSQDSSDKIVEAYRDDMINAAMTTSNPAPTVLGTQQNSEDDVPDVPPFNGTPALDPFGQPINEVGISDDELPF
complement(1974523..1975449)       PHAGE_Lactob_Lj928_NC_005354: putative replication protein; AUC63_01862; phage(gi41179303)     2.44e-22            WeissellacibariaMNELVVNPANVTPAIVEVTGVDELEQYVDGMLATYKKTPVSAATLAQAKQARTDLNKAYKGLGETRRNIADKVAGNWPDTEKRLKEIEKKIQSVSDGTLKPQIDEVVEADKQDRKTLILIEIEKIATEYNLPAEKIQFDDKWLNKTAKWAETEQTVRSQFENIKNEVQVRELQTSAVEAYAAELQMDPAGVAGYVGQLDYKDLDEVKASMKKDVRLAKARFAAERARAQADFDAKVKRAEQATKIGNKLVDQETGEIIEEPEALKRTYIIQLSDITDQQFAYVEQFIHNKFDKGFEASGVTYKSAVQR
complement(1975446..1975541)       hypothetical protein; AUC63_01863                                                    N/A                 WeissellacibariaMFDELIDPPDDPEDNEEAFNNYMDEYEDKDL
complement(1975534..1975677)       hypothetical protein; AUC63_01864                                                    N/A                 WeissellacibariaMKNELRVEALRHMNRAFKAEQRDNNDGTVSEFETGVADVLNWVADHV
complement(1975758..1976285)       hypothetical protein; AUC63_01865                                                    N/A                 WeissellacibariaMDYKGPTGVGNIHYNFAKPVKFDVEAEKERIRKSGVERPNKALPEYERRYRRFAKFLSDYMVGKNADERDDLVSQASQVSGLSFITASNSRYLGRFLRERSEAELEGTPFNKPNITSAVGYEDRYKTFKRAMDSKRPEQSFSYIATPIAKQLRMSLASLYNTKYKGRYDKENKNA
complement(1976275..1976463)       hypothetical protein; AUC63_01866                                                    N/A                 WeissellacibariaMKISDYQMVRNFAEGRGFFNYEVQTLPVGGVRVGFKTKRGGQVWFDDKQEVIDYVLEATNGL
complement(1976453..1976677)       hypothetical protein; AUC63_01867                                                    N/A                 WeissellacibariaMWIIDALKLVGWQALQATLLFVAAGWLVIANRVRLAWFLKGILRMVVYPFVFLANGYDAAEALKPTGKLVRYED
complement(1976727..1976960)       hypothetical protein; AUC63_01868                                                    N/A                 WeissellacibariaMARFSEEKATIDELEQLRVVGQVGARRILGRSLWYFKEHIRYSKKFMQNVPNKTPGAYKPTYLVSDVLRYRKLNDWW
complement(1976963..1977172)       PHAGE_Clostr_phiMMP01_NC_028883: putative repressor; AUC63_01869; phage(gi971820019)     3.17e-05            WeissellacibariaMSLGNFINMVLKNKGLTNYWLSGVTGIDKTTLYSLKVGKLRTLTLRNMIKVAIALDIDLNELKKIDWED
1977293..1977571                   PHAGE_Clostr_vB_CpeS_CP51_NC_021325: hypothetical protein; AUC63_01870; phage(gi509140075)     1.57e-22            WeissellacibariaMPKPYIITYDLNEPGKKYDDVAAAIKSSARTWTHYLESTFIITSDLSADQIQKNIKPYLDNNDALFISELAANNHQGWLNRDQWDYLREHVF
complement(1977568..1977786)       hypothetical protein; AUC63_01871                                                    N/A                 WeissellacibariaMKNKTVKVENVHVEGLDELKKLSQDLLEQAEQLSNTIERFNQLKLIISTRNDRFIPEDNDGIKCGNPVSKNF
complement(1977789..1978526)       PHAGE_Lactob_LL_H_NC_009554: hypothetical protein; AUC63_01872; phage(gi148750866)     1.09e-43            WeissellacibariaMTNEVQVFNGLKIKEVNGQVMFEAESAATGLGLTKISKGQQYVRWERVNEYLGLSTSGQLVKRGDFITEPQFYKLAIKANNDTAERFQDWVTTEVLPSIRKTGSYQAKPMTEMEIVAATANKLVQQEKQLTQIVERQNTTEMQVAELKNEFGLPAKVAGKLKKLGASRVYFWLGGKDTNAYREVSAKVFSEMWRDFKNHFGELDSYTSLPMDQLQAGRDYIRNWRPSTNTVMDIERLNAQMELEV
complement(1978537..1978764)       hypothetical protein; AUC63_01873                                                    N/A                 WeissellacibariaMTATTIEEQENALKRKIKKRINDEMWERDDMKQWELAEMIGEGVSQTNRAINGETSPKSKTIRNKIFTLFNITDL
1978851..1979060                   hypothetical protein; AUC63_01874                                                    N/A                 WeissellacibariaMSNIADRIVDFVQSKQPDENRYMSVHLSNGDSVSFSSVLSYENDVLVIKAEKRTHFVDANSIVDFVVHD
complement(1979057..1979185)       hypothetical protein; AUC63_01875                                                    N/A                 WeissellacibariaMSSETLEVIETLIVEIAKAPETKTSSEMVTAISELVAAINQY
1979443..1979784                   PHAGE_Lactoc_bIL310_NC_002669: immunity repressor; AUC63_01876; phage(gi13095874)     3.20e-17            WeissellacibariaMTVYERIKEISKTRGMSLQQVAKSAGLSQNMIYQYKNVNPKAETLQTLADVLGVSVDYLLGNSDNMHPVDKTDERDGDLKDYFEKHPILQYDGNPIPEAELKIIRRILEDMDD
1979777..1980184                   PHAGE_Lactob_LF1_NC_019486: Lj965 prophage repressor-like protein; AUC63_01877; phage(gi418489418)     1.21e-11            WeissellacibariaMTDLLNYLLFIAIRNDIKVEFTDLLSPSTPDLSIPSERKIIINENSSIGVHVTFRFAHELAHILFGNDNQDYVYQFSIGTKKESERKAHKRALRIISRFVYNETPMEYRNYVDFMNAFNLPSSFENWAKDAIKAA
1980237..1980854                   SmpA / OmlA family protein; AUC63_01878                                              N/A                 WeissellacibariaMNLFTKYIGIGAVAVLVGSTALQAIPQVGNNHFVTVASASSKSKIKKVKLGMTKKQVKKILGKPDRDDSGMLTYEKYGYLYFSKGKLTGGEDKNIQAQVTKKNAAKKSSKVNKRQTLLSQAKYFGTKDVESIQKATYAYASTEIDGGMMYMWKSKAGKLIRVDLDEYGKTAVYKYDDSKDNGLGEQLYIGKTILQKKPRTTVVYP
1981233..1981508                   hypothetical protein; AUC63_01879                                                    N/A                 WeissellacibariaMEDKKSLVLIGRIASVMSVLMYVSYIPQILDNLSGHSGDPIQPFVAMLNCIFWTIHGLFGSDGHTRDMPIVIANIPGILFGFTAFITVFIH
1981518..1981883                   Pyrimidine dimer DNA glycosylase; AUC63_01880                                        N/A                 WeissellacibariaMRLWHESLIPKLPRQQLLGQHRECCALRGGGWGKKHATVNYVFDHSPYKLFQYHELVMNEMLSRGYTPNELWLDPLYRGTKEAAYTSLSSEVLTSPIYPEHDNIYLIECIENLREKGINIE
complement(1981919..1982119)       PHAGE_Entero_EFC_1_NC_025453: hypothetical protein; AUC63_01881; phage(gi725950514)     2.29e-24            WeissellacibariaMNFGMRKPSPMRSIKARTTGKAKRAVKQAIIPGYGQKGMGWLTDTKKEAYNKVYKKTTFSIFDLFK
1982322..1983413                   PHAGE_Oenoco_phiS11_NC_023571: Phage integrase; AUC63_01882; phage(gi589286605)      1.14e-45            WeissellacibariaMAVYKTEHGWRADFSFKDASGKYRKKSKRGFKTKKEAEAWLAEYSINHGKPTLQKGSQILFTDYFDEYAKLHLETGMKEATYESWRFQKKIVVDVYFTGLTLDQITRPMYQSFLNHYAIGKKRQTVSKRHRLLRLVINQAFHDGLIQSDPTFGVTIPGSDSKDASEKFLQLDELTTLIEYIENDEKLITWRTGFMVYLISLSGLRAGEALALTKNDIDSDARTINVSKTKQLSGAVTTPKTKTSNRTIVMPNRFFDSYQKFIDAKEHWNSANELFDGRRTPSVVNRWLERLEKKLGFENIISLHGLRHSHVSYLLSSGVDISYASKRLGHSNISITQDTYAHLLQHKQQSEEDKTITLLDQLD
1995686..1995697                   attR                                                                                 N/A                 ACTAGCTTACCA
