gi|00000000|ref|CP013786.1|  Piscirickettsia salmonis strain PM58386B, complete genome. 3193374, gc%: 39.72%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
860677..860688                     attL                                                                                 N/A                 ATAAAATTAAAT
complement(874823..875494)         integrase; AVI54_04290                                                               N/A                 PiscirickettsiasalmonisMSQKRKKPSAEFKTKVVLEVIEGDQTLNQICSKYELVPKTVQNWKKVFLANASLAFNIDSAVAEFKDEIKTKEKEVNELHRQLGKRTAELEWAAKKLKSLDYETRKCLIESEPKNIPVTRQCELINFNRSNCYYKSVRCTKDKMELLRAIDRIYTETPFYGYRKVHQQLIEGGYSVGLNRVRNYMNELGLKVIYPTKKVCTTLAHPEHKKYPYLLRDLEVYKPN
875682..876011                     hypothetical protein; AVI54_04295                                                    N/A                 PiscirickettsiasalmonisMHQGVNQVLLGVEEVSEAGEILKLIIQSAAEVNAVTQQIATAIAIQNEETVSVSSHMYDSLEDIEILKDDTNQASHSATSLKQRATELMKTISAFRLSNNHTEDHSNQK
complement(876922..877620)         transposase; AVI54_04300                                                             N/A                 PiscirickettsiasalmonisMHYVINKLKSQIEKQKATLLDDEGSLSIESLLSSDKFQSIINNCRSFRSRFYTPFVTLILFIRQVLSPDKSCKNTVATFLASVSTEDNNNIPSSNTGPYCKARQKLPIETLESLVKLSGDSLSKSSNARWKIYNREVKLIDGTSLTMADSEENQSRYPQHDAQKAGAGFPIMRLVAIMSLTTGGIIDYAVGAYKGKGTGEHALLRQIKDSIHKDDIVMGDRYFPCFFVMGDLQ
877868..879379                     hypothetical protein; AVI54_04305                                                    N/A                 PiscirickettsiasalmonisMPEPRYVLVDNSKKGSIKNGNCGYYAYALGLMSYLCKGHKAEQAKEIWQRLDLDEKDKSSLNSIIKEKNGFMSLKNQRTMMRLLGPVLREKNIDNIINIFSSKDYKGSPYHSPLIWKIKKMIAGQLLRPQRWLLGEFSDPDGIFSETELLRASGIYDQVEKHAKKCQAEVAKLDRELLRNKANPNYMTQQFIISYKETTAEHTRLRSLIQEKQASEDDKEKAQRYQMFIERNLHIYNQVDQAAKGVIVAGSEPEKVAWSRLKEDALAEVEDLVNEAYEGLVKSPQFQWWFRAQFAHDGVWAGDIELNGCLHPFIQGEHDIPFAYVAGDGESTPYLLHDDGILLSRRSKFQRLRSGHTPSHHWMTLVPKEQFLPEPLQEGELDDFNKIYQALVAGQNKMFRTNKGKRVDVDKINEYILKYPDSKSACAVWLLKKHKEAPLNRNNQDLIADIYDATKSKYGRSRKAADWAKPQSSTTFFDYIEKQEKRVFSSRSVAIYKSLEPEL
879639..879666                     attL                                                                                 N/A                 CGCCCTCCGTCATCTGAAGTGCAACACT
880340..880633                     PROPHAGE_Xantho_33913: ISxac3 transposase; AVI54_04315; phage(gi21231087)            1.40e-15            PiscirickettsiasalmonisMGKRQVTKYTEEFKKSSAKLAVDSNQAISHTAQELGIHSSTLHGWVNKYHPNSPNTVKDEVSDMVAEIKQLKKELARVTQEREILKKAAAYFASETQ
880750..881166                     PROPHAGE_Escher_CFT073: transposase insF; AVI54_04320; phage(gi26249410)             4.73e-39            PiscirickettsiasalmonisMIENQKLAKRIKGIFIESRATYGTRRIRKQLATQEISVSRKRVGRLMKQNQLCCKIKRKFKVTTDSKHRLPVAKNVLDRDFSATRPNQKYVGDITYIRTQQGWLYLAVVIDLFSRKVVGWAMEDHMEASLVNDALLMAL
881255..882130                     transposase; AVI54_04325                                                             N/A                 PiscirickettsiasalmonisMDLTLISLFCVIDDFCQELLPQWNAIFLEDTNKKRNKPSQMSTSEIMTIMIYFHKSNYRNFKMYYLHVIKGSMVKYFPNSVSYNRFVELMPSILLPLCFFIAAQGKTATGIYFVDSTILRVCHEKRASQNRVFKGLAKKSKSTMGWYYGFKLHIIVNDMGELMAFKMSKATTDDRVVLPKMAENLTGKIIGDKGYISQKLFDQLYEKGLQLITKIRKNMKNKLVLMIDKILLRKRGIIESVFDQLKNISQIEHSRHRSADNFMVNIVAGLAAYCLQEKKPSLGIKYNLLNG
882150..882479                     PROPHAGE_Escher_CFT073: transposase insF; AVI54_04330; phage(gi26249410)             3.91e-29            PiscirickettsiasalmonisLWKRKPKTGLIWHSDRGSQYASESHREILKDYKIKQSMSRKGDCWDNAVSESFFHTLKTELVHHMNFKNRQEAKSAIFEYIEVFYNRKRIHSANDYLSPEEYEHNQKIS
complement(882488..882883)         PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; AVI54_04335; phage(gi588498272)     7.74e-07            PiscirickettsiasalmonisMIYRHLNEKDRFYIEQRLSEGDSLRSIARALGFSPSTISREIKRHTPIDFKGLYCHRLTSRCAQEKRANAKQGQAFRQISEEAKMLIHQRLSTHTSPDVISQELIREHNIQVSESTIYRYIYDDSDLATLF
complement(882977..883429)         PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: transposase; AVI54_04340; phage(gi971749639)     6.04e-76            PiscirickettsiasalmonisYAGYLGSQDTYYVGTMKGVGRIYQQTFVDTYSRVAFACLYTEKNAVTAAHALNESVIPWFEERDTPLLRILTDRGTEYCGKIEHHAYQLYLAIEDVDHTRTKARSPQTNGICERFHRTMKQEFYDIAFRKKVYNSLEELQVDVDEWLIKYN
883520..883543                     attL                                                                                 N/A                 TCACACAGCGTTACGTGCCTTGAA
883520..883543                     attL                                                                                 N/A                 TCACACAGCGTTACGTGCCTTGAA
complement(883691..884164)         PROPHAGE_Shewan_MR-1: ISSod13, transposase; AVI54_04345; phage(gi24375047)           2.58e-57            PiscirickettsiasalmonisMKTQSAKLVLGNVSKACEVMGYSRDSFYRFKKLYETGGEEALQEISKKKPNVKNRVPEHIEQAVIDLAIENPALGQLRASNELLQRGIIVSSSGVRSVWLRNGLETFKKRLKALEAKSAQDGILLTEEQLQALEKAKQEKEAHGEIETEHPLRAMEC
884208..884651                     hypothetical protein; AVI54_04350                                                    N/A                 PiscirickettsiasalmonisMSRHKCTKEIYKAFLQASSVRYSGLALSEVSPKPFSHDSVSRWLQSQQYRPRDIWHIVKDLINTEEPCLLVVDDTVLDKHRSKQIDLVHHQYSGNAHDVIAGIGLVNLVWYGLERNILYQLIIVYIRTYALTTKSSYGPTKNWYFQYI
complement(885891..887780)         hypothetical protein; AVI54_04360                                                    N/A                 PiscirickettsiasalmonisMNRSFKKSEGDIYSYLYKLSVFLVIVVTFLLLTMLSFFFYNHTSNKIRNIENNLNKLYRLSDKIEEKIVSTSFILKEVYIDPRSLTSDFKKSIDFFTNLGLLNKYFYGVGYAVNPVYKEYAVYIYRNSLGKIVADDMVSVYEKHQQKYYERPWFKQVVNDSKPHYFSPQTNLFGTPSYDLTYTFPLSYKKRVYAVGIVDVSMSEFFYLLFKELKSYEDVDVYYISGKYNNHKDKIISLDGDFISSKKLKNLKEYYYSGGLNKNKWFYKGGSLYRNLCFMRGSLNFIVKIDLVPIFCKIAFLFIVIIFTVLFITLFLLRLSRRAITNISFPIEHIVKEVNKIAMGDLSNAISITSCVYEVNALSQSIESMRSEIIKLIKKEKESENIKAEIQLASRIQSAFLSQSNKNFAQMSKYLDIFSCYDKGNMISGDIYFINKIGKSIYIFIGDSSGKDVAASIFSLFVLARFKILSSQLLSPGRLLTELNDYLCEFNREAMFITAMCCKIDATNMTCVFANAGHDLPLLYSAESKKVKEILCDPNLILGVLAKQNYIETTVKLCKNEEIILYTDGITEAVKSGTHYGKHNLITFIKNSNRESIKDLAKALVTDVAEFNYDGKDKDDRTAIWIKVK
complement(887815..889020)         hypothetical protein; AVI54_04365                                                    N/A                 PiscirickettsiasalmonisMISFKELNNNEFYKELVNSKEVTNILDCPILSKRDYDRTINSLNKCYEYTEPFWSSVYWSPTGGSTSSNSKSMYFPWDNDESEKQRSLMGKALSNTSIGVFSKNNVVANLFTGTSMYRSLELFNKLVTNAGVTSLPIGSNCSNEDTHEFLEHFNADIIAGPPVTIADYASYYLKNGGNNSISGIFYATNPLFPAQEHIINKAFNNPDIFSVYGSAETGPWAFYNSKILDKNKFIIVSSIADVEIVDQDDDGFGDIVVTIKVRKRFPVVRYSIGDIGKLSEFNLDGKNYQLLEVKGRNSQWLSYADMQIELDKISSELNYYLDWKIVQYFEKNSNVEVVNIRVLSDGNNIELLKLEDKFNTLLHVSEFKGALKVNVEFVSLEGLIKSKISNKVIKIFDIRNS
complement(889023..890111)         hypothetical protein; AVI54_04370                                                    N/A                 PiscirickettsiasalmonisMDIAGAKCQTSYQNCIAKYVKISGLLCVSVLLLAIFFSLFTYYYIGLLAAKFILIYSIGFIPFIFSSALRYILLAKSYSKIIKITNIITFIICISVTLACYYLFESVSIVSFAYGCIIGFLYNFFHLLHFSLKMNIINISFFKCIKYIKSSECLSFIYEGFKVSLVYASDSIICAIIIMLTLSYGESYVIAVQITLQLFLFASFWITGFANGLMIELPKYKSVYKSKKSLKLIIRYIFKNSIIYFLLVSLIFILFSKIILEYIFNLHGLSYKVAHIEVYMVAILVLFDFIRQSLFYILRLFNQVMGAVIISYICLFFSVFLMFLVKFMDKSPVYFLFLYILSCLVILIIYFIKIYNNNFLRS
complement(890302..891525)         hypothetical protein; AVI54_04375                                                    N/A                 PiscirickettsiasalmonisMKHLVPSYLDSSKYSLDYDNFISKISSKMDLENYGTRFSPYLLDVPMSILNQVEEIHPVLVKAIIQIVNNYLLDDDLQEILKLDDRKLSLIKLASEAPYQLFSIRPDFLISENNEVKLCEINARFTINGFMGSYYTHLQTKEDYSENQGIEDKIARLIDNYTSRFDLSKPLFLMRQNETGYDLNLLKIFLIDRGVDIIDIEPQDLSLANKKLVAKGVECKQLIMELHQNELENISDDILEHIILNVNYVNDIRTIFITHDKRLFSILSNSKIMNRYLSNEEVGILSKHIIETYLLSKAKDEVINNKNNWVLKKCLSGKGEGMYIGAEASLPEITNVIDNQAAQYIAQPFLAQKKIEIFIDGEYRTCNAVGMILSLNGAYQGTGIFRVSPNSIIAVSRGGCIVVPSFS
complement(891575..892375)         hypothetical protein; AVI54_04380                                                    N/A                 PiscirickettsiasalmonisMSAIDIEDVYEYSQPIRLPQMCFQTLDFPEQAVPSSLYKHVLNKMGVLIVSLSYEEDSPKTLEKIVALLGEAHTHSTGNDAVWHIKQGGSKGNEALARSHKLSEFVLHTDCSYEKQVPDFFALHCIRHDRFEGGKNLLVDCSTLIQHLTPESFEALQNDPVEIIVPPEFKRDIESINARVIDQNFNVRYRKEILKSEVLTPALQSALEEFERLCHSPVLNRKLELKDNQILFLDNKRYLHARTTIKDKDRHLMRIRFFTDFNKFSN
complement(892372..892770)         hypothetical protein; AVI54_04385                                                    N/A                 PiscirickettsiasalmonisMITFELNQSSDRMQLIANSLASLRSSLSTRFDIKLNLVIEEVVENIFNNNANIDLYVKITINFSVDNKGKISILFCDNGSEFDLTNYQFKGIPNQDVSRGRGIYLIKHYASSISYKRNQHLNILKIMIGDKK
complement(892767..893084)         hypothetical protein; AVI54_04390                                                    N/A                 PiscirickettsiasalmonisMLIMKVLIVKENDVMIVNLYGRLDARTAAEFEKKIQCDLVPVKKNVCLDCQELEYISSAGLSALILLAKELKSNDCALVLSNLQPMVSDILHVTGLIDKVFTVQP
893469..894197                     PROPHAGE_Brucel_1330: transposase, putative; AVI54_04395; phage(gi23502708)          6.87e-49            PiscirickettsiasalmonisMARRKRFKKNQPFKWKHYSGEIILWLVRWYGRYALSYRDLKEMTGERGLELERSTICRWVHEYGPEIAKRLRPHFRQTCASWRLDETLVKIKGRWYYLYRAIDKYGHTLDWMLSRQQNAKAALRFFKKAIAQPYVKSPRVVNVDKHASFPPAHQKAKDEGVFSRRCKLRRVKYLNNCIENDHKAIKRKSRFRQWYQSLSTARSTIDVMEAMRMVQKGQLRYIKKQDICAQNQLIDKLFGLAA
complement(894238..894882)         hypothetical protein; AVI54_04400                                                    N/A                 PiscirickettsiasalmonisMLIFGIHFQTPLWLLCLPIVIIIILFLWWQNKNHQHLHAICDSHLLPYLLQGQSSGQKLIFWILGLSWFIAIFALAGPSLKQNKPLLYQSSYSRIFVLNLSKSMLAQDTQPNRLSIARFKLLELLKQSQDIRTALIVFSQRAYIVSPLTKDSQTISATVPLLSPKLMPATGNNPATGLDQALKLFEQAKTGQGQVILITDSAGQKKRHCCEKLS
complement(894895..895362)         hypothetical protein; AVI54_04405                                                    N/A                 PiscirickettsiasalmonisMKYPKNSRVLILLTDGTSNSGALSPTLAAKLAHSEKIKIYTIGLGASEISLKTPFGTRYLNPSHNLDTATLKAIANITKGQFFRAQDLNSLEQIYHAIDNLEPSKSISHNLRPEHPLYQWPLAIALLLSLVTSLRFILVNLRSIQKLNKLKKIKE
complement(895417..896391)         PHAGE_Spirop_1_R8A2B_NC_001365: putative transposase; AVI54_04410; phage(gi9626114)     5.82e-29            PiscirickettsiasalmonisMIYRHLNEKDRFYIEQRLSEGDSLRSIARALGFSPSTISREIKRHTPIDFKGLYCHRLTSRCAQEKRANAKQGQAFQQISEEEKMLIHQRLSTHTSPDVISQELIREHNIQVSESTIYRYIYDDRERGGELYKNLPHSGKPYKKKVSRGDQTKIPNRVGIEQRPAIADEKTEFGHFEIDTVVGRDHQSYLLTLVDKANKMCCIRKMPNKQAKTVINTFMNVVGSTFFDFKTITSDNGTEFAGHEAISKITEADFYFARPYRSCDRGLNEHTNGLIRRFLPKGTDFNEVSDKEIAKIEHTLNTRRRASLNYRSPNHVFLEYLMAA
complement(896421..897020)         hypothetical protein; AVI54_04415                                                    N/A                 PiscirickettsiasalmonisMIQFAWPWFFALLPLPFLVPFILPCAKQNQALLQVPFFQQLNQFSINQKKHKRQYKDKFSAYFIWGLLIIAAANPVWIGQSIYQPIAGRNILLAVDISGSMKEKDMHLNNTPVTRLTIVKKAAAYFIKERKHDRIGLILFGSNTYLRTPLTFDHITVLSMLNNAITGLAGPKTAIGDAIGLRPPSSEVQHRVESSYPYR
complement(897017..897478)         hypothetical protein; AVI54_04420                                                    N/A                 PiscirickettsiasalmonisMSNHSPLSLLKDIHAPEAVSGWPPAPGWLILISIVIILFIVLSYFLKKYRNRQKVKLYGLNSLYDIPQHSNSHYAKECNALLKRVAHYYFPEQNIKILSEKKWHDFLILKLPKKHHNIAITQVNYLITSLYQPEIISNIELKKFVQLWIKECR
complement(897522..898457)         hypothetical protein; AVI54_04425                                                    N/A                 PiscirickettsiasalmonisMFTSTPHIEPAKGTTSHIADLLQLTQQARRLPIRLAHFAKSPTSGPHPSIFRGRGMEFEEVRHYQPGDDVRAIDWRVTARTGQLHTKIFRQEHERPFHFIVDHSHSMQFGTRVCFKSVMADYSCAALAWLAFHHGHRIGGAIVHEQPIWLKSQAGKKGLFSLLNKMTTTHAPHQSQQLSNTLEQFIHHSRGGEILIIFSDFFDFSEHTQSLLKQLSYHYDIACIHIQDPLEQRLNQQGNYHFSNGKQTVNITIRSQKDKKYYSDYMSKLHEEKQHFFIKNGIAYCTISTDQDPIVALEQAITDQPLLRRQL
complement(898485..899480)         PHAGE_Acidia_virus_NC_007409: hypothetical protein; AVI54_04430; phage(gi75750456)     4.60e-08            PiscirickettsiasalmonisMPLDHQLTDNQSLQDQFIHLQDELNHHIIGQKELLLMLQIALLADGHLLVEGAPGLAKTTAIKALSHYVEGDFQRIQFTPDLLPSDITGTDVFRPQTGEFYFQHGPLFHPIILADEINRASAKVQSALLEAMGERQITVGNTTYPLPQLFLVMATQNPLEQEGTFPLPEAQLDRFLLHVEIGHPNRQEEAEILKLVRQNQDTLQPKNQINHYLSQEVIFAARQECQQIFLSPAIEEYIVQLIIATRLPEQYNKELAHWLRIGASPRATIALERCARAHAWLANRSYIAPDDVHQVLFNILRHRLLLSFEAQAQGITTNQCIQRILETVPTP
complement(899704..900666)         PHAGE_Prochl_P_TIM68_NC_028955: putative zinc-containing alcohol dehydrogenase superfamily protein; AVI54_04435; phage(gi971760362)     9.81e-05            PiscirickettsiasalmonisMKVMIINQFGDSDVLQLADIPVPSIKDDEVLIQVSHTSVNPADWKIRAGLYEYLLPYKFPIILGWDAAGVISEVGCKVSRFKKGDRVFSYCRKPVIQQGSYAEYLAIDADAVAHIPNNISFAEAATIPMTGLTVWQCLFETIRLTAGQTILIHGGAGGIGSIAIQLAKLQQTTVYTTASLHNHDYVYSLGADIAIDYQNQDFVKEIAAREPAGIDLVLDTRGGEVQQNSYQIIKKGGHLISLVTPPDDDEAAAYQVHAEFVFGYPNGEQLKELAKLLEKKQLKPTIYEEMSLEGAAIAHDMNRNGRLERGKLVLHITPSS
complement(901256..901534)         PHAGE_Entero_P1_NC_005856: InsA; AVI54_04445; phage(gi46401643)                      1.72e-18            PiscirickettsiasalmonisMPHIEVNCPQCSENDVIKFGRNASGNQRYKCKNTGCDKDTFLLNYKRPGDLPETKEKIIDMSMNGSGIRDIARVLKVSTNTVMKELKKSQVS
901837..901860                     attR                                                                                 N/A                 TCACACAGCGTTACGTGCCTTGAA
complement(902094..902822)         PROPHAGE_Brucel_1330: transposase, putative; AVI54_04450; phage(gi23502708)          6.87e-49            PiscirickettsiasalmonisMARRKRFKKNQPFKWKHYSGEIILWLVRWYGRYALSYRDLKEMTGERGLELERSTICRWVHEYGPEIAKRLRPHFRQTCASWRLDETLVKIKGRWYYLYRAIDKYGHTLDWMLSRQQNAKAALRFFKKAIAQPYVKSPRVVNVDKHASFPPAHQKAKDEGVFSRRCKLRRVKYLNNCIENDHKAIKRKSRFRQWYQSLSTARSTIDVMEAMRMVQKGQLRYIKKQDICAQNQLIDKLFGLAA
912499..912522                     attR                                                                                 N/A                 TCACACAGCGTTACGTGCCTTGAA
913052..913079                     attR                                                                                 N/A                 CGCCCTCCGTCATCTGAAGTGCAACACT
916585..916596                     attR                                                                                 N/A                 ATAAAATTAAAT
