gi|00000000|ref|CP013791.1|  Piscirickettsia salmonis strain AY6297B, complete genome. 3187881, gc%: 39.73%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1521629..1521640                   attL                                                                                 N/A                 ATAAAATTAAAT
complement(1535775..1536446)       integrase; AVI55_07380                                                               N/A                 PiscirickettsiasalmonisMSQKRKKPSAEFKTKVVLEVIEGDQTLNQICSKYELVPKTVQNWKKVFLANASLAFNIDSAVAEFKDEIKTKEKEVNELHRQLGKRTAELEWAAKKLKSLDYETRKCLIESEPKNIPVTRQCELINFNRSNCYYKSVRCTKDKMELLRAIDRIYTETPFYGYRKVHQQLIEGGYSVGLNRVRNYMNELGLKVIYPTKKVCTTLAHPEHKKYPYLLRDLEVYKPN
1536634..1536963                   hypothetical protein; AVI55_07385                                                    N/A                 PiscirickettsiasalmonisMHQGVNQVLLGVEEVSEAGEILKLIIQSAAEVNAVTQQIATAIAIQNEETVSVSSHMYDSLEDIEILKDDTNQASHSATSLKQRATELMKTISAFRLSNNHTEDHSNQK
1537155..1537173                   attL                                                                                 N/A                 CTAATGGCACTACCTTAAG
complement(1537169..1538134)       PROPHAGE_Escher_MG1655: IS4 transposase; AVI55_07390; phage(gi16132099)              5.20e-15            PiscirickettsiasalmonisMADSEENQSRYPQHDAQKAGAGFPIMRLVAIMSLTTGGIIDYAVGAYKGKGTGEHALLRQIKDSIHKDDIVMGDRYFPCFFVMGDLQSIGADGIFKAHSQRKYDFRKGRKLGSKNHLVIWKKPHKPDWMTQETYDSYPDQMTVREFKIKGEVYVTTFQDHKKYNKVALANHYKQRWHIEINFNSLKTIMSMDHLRSKTPDMVHKEIAVHFLAYNLIRTLIAEACRNTERLPIQVSFKGVIQLFNSFVSLLSFSADCNKAHAILLHAIIKNKVGNRPGRIEPRAVKKRPKAFRRLNKSRELEKAEITKRMKKNSNKKCSSAP
complement(1538248..1538559)       hypothetical protein; AVI55_07395                                                    N/A                 PiscirickettsiasalmonisMHYVINKLKSQIEKQKATLLDDEGSLSIESLLSSDKFQSIINNCRSFRSRFYTPFVTLILFIRQVLSPDKSCKNTVATFLASVSTEDNNNIPSSNTGPYCNYQ
1538807..1540318                   hypothetical protein; AVI55_07400                                                    N/A                 PiscirickettsiasalmonisMPEPRYVLVDNSKKGSIKNGNCGYYAYALGLMSYLCKGHKAEQAKEIWQRLDLDEKDKSSLNSIIKEKNGFMSLKNQRTMMRLLGPVLREKNIDNIINIFSSKDYKGSPYHSPLIWKIKKMIAGQLLRPQRWLLGEFSDPDGIFSETELLRASGIYDQVEKHAKKCQAEVAKLDRELLRNKANPNYMTQQFIISYKETTAEHTRLRSLIQEKQASEDDKEKAQRYQMFIERNLHIYNQVDQAAKGVIVAGSEPEKVAWSRLKEDALAEVEDLVNEAYEGLVKSPQFQWWFRAQFAHDGVWAGDIELNGCLHPFIQGEHDIPFAYVAGDGESTPYLLHDDGILLSRRSKFQRLRSGHTPSHHWMTLVPKEQFLPEPLQEGELDDFNKIYQALVAGQNKMFRTNKGKRVDVDKINEYILKYPDSKSACAVWLLKKHKEAPLNRNNQDLIADIYDATKSKYGRSRKAADWAKPQSSTTFFDYIEKQEKRVFSSRSVAIYKSLEPEL
1541279..1541572                   PROPHAGE_Xantho_33913: ISxac3 transposase; AVI55_07410; phage(gi21231087)            1.40e-15            PiscirickettsiasalmonisMGKRQVTKYTEEFKKSSAKLAVDSNQAISHTAQELGIHSSTLHGWVNKYHPNSPNTVKDEVSDMVAEIKQLKKELARVTQEREILKKAAAYFASETQ
1541689..1542105                   PROPHAGE_Escher_CFT073: transposase insF; AVI55_07415; phage(gi26249410)             4.73e-39            PiscirickettsiasalmonisMIENQKLAKRIKGIFIESRATYGTRRIRKQLATQEISVSRKRVGRLMKQNQLCCKIKRKFKVTTDSKHRLPVAKNVLDRDFSATRPNQKYVGDITYIRTQQGWLYLAVVIDLFSRKVVGWAMEDHMEASLVNDALLMAL
1542194..1543069                   transposase; AVI55_07420                                                             N/A                 PiscirickettsiasalmonisMDLTLISLFCVIDDFCQELLPQWNAIFLEDTNKKRNKPSQMSTSEIMTIMIYFHKSNYRNFKMYYLHVIKGSMVKYFPNSVSYNRFVELMPSILLPLCFFIAAQGKTATGIYFVDSTILRVCHEKRASQNRVFKGLAKKSKSTMGWYYGFKLHIIVNDMGELMAFKMSKATTDDRVVLPKMAENLTGKIIGDKGYISQKLFDQLYEKGLQLITKIRKNMKNKLVLMIDKILLRKRGIIESVFDQLKNISQIEHSRHRSADNFMVNIVAGLAAYCLQEKKPSLGIKYNLLNG
1543089..1543418                   PROPHAGE_Escher_CFT073: transposase insF; AVI55_07425; phage(gi26249410)             3.91e-29            PiscirickettsiasalmonisLWKRKPKTGLIWHSDRGSQYASESHREILKDYKIKQSMSRKGDCWDNAVSESFFHTLKTELVHHMNFKNRQEAKSAIFEYIEVFYNRKRIHSANDYLSPEEYEHNQKIS
complement(1543427..1543822)       PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; AVI55_07430; phage(gi588498272)     7.74e-07            PiscirickettsiasalmonisMIYRHLNEKDRFYIEQRLSEGDSLRSIARALGFSPSTISREIKRHTPIDFKGLYCHRLTSRCAQEKRANAKQGQAFRQISEEAKMLIHQRLSTHTSPDVISQELIREHNIQVSESTIYRYIYDDSDLATLF
complement(1543916..1544368)       PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: transposase; AVI55_07435; phage(gi971749639)     6.04e-76            PiscirickettsiasalmonisYAGYLGSQDTYYVGTMKGVGRIYQQTFVDTYSRVAFACLYTEKNAVTAAHALNESVIPWFEERDTPLLRILTDRGTEYCGKIEHHAYQLYLAIEDVDHTRTKARSPQTNGICERFHRTMKQEFYDIAFRKKVYNSLEELQVDVDEWLIKYN
1544459..1544482                   attL                                                                                 N/A                 TCACACAGCGTTACGTGCCTTGAA
complement(1544630..1545103)       PROPHAGE_Shewan_MR-1: ISSod13, transposase; AVI55_07440; phage(gi24375047)           2.58e-57            PiscirickettsiasalmonisMKTQSAKLVLGNVSKACEVMGYSRDSFYRFKKLYETGGEEALQEISKKKPNVKNRVPEHIEQAVIDLAIENPALGQLRASNELLQRGIIVSSSGVRSVWLRNGLETFKKRLKALEAKSAQDGILLTEEQLQALEKAKQEKEAHGEIETEHPLRAMEC
1545147..1545590                   hypothetical protein; AVI55_07445                                                    N/A                 PiscirickettsiasalmonisMSRHKCTKEIYKAFLQASSVRYSGLALSEVSPKPFSHDSVSRWLQSQQYRPRDIWHIVKDLINTEEPCLLVVDDTVLDKHRSKQIDLVHHQYSGNAHDVIAGIGLVNLVWYGLERNILYQLIIVYIRTYALTTKSSYGPTKNWYFQYI
complement(1546830..1548719)       hypothetical protein; AVI55_07455                                                    N/A                 PiscirickettsiasalmonisMNRSFKKSEGDIYSYLYKLSVFLVIVVTFLLLTMLSFFFYNHTSNKIRNIENNLNKLYRLSDKIEEKIVSTSFILKEVYIDPRSLTSDFKKSIDFFTNLGLLNKYFYGVGYAVNPVYKEYAVYIYRNSLGKIVADDMVSVYEKHQQKYYERPWFKQVVNDSKPHYFSPQTNLFGTPSYDLTYTFPLSYKKRVYAVGIVDVSMSEFFYLLFKELKSYEDVDVYYISGKYNNHKDKIISLDGDFISSKKLKNLKEYYYSGGLNKNKWFYKGGSLYRNLCFMRGSLNFIVKIDLVPIFCKIAFLFIVIIFTVLFITLFLLRLSRRAITNISFPIEHIVKEVNKIAMGDLSNAISITSCVYEVNALSQSIESMRSEIIKLIKKEKESENIKAEIQLASRIQSAFLSQSNKNFAQMSKYLDIFSCYDKGNMISGDIYFINKIGKSIYIFIGDSSGKDVAASIFSLFVLARFKILSSQLLSPGRLLTELNDYLCEFNREAMFITAMCCKIDATNMTCVFANAGHDLPLLYSAESKKVKEILCDPNLILGVLAKQNYIETTVKLCKNEEIILYTDGITEAVKSGTHYGKHNLITFIKNSNRESIKDLAKALVTDVAEFNYDGKDKDDRTAIWIKVK
complement(1548754..1549959)       hypothetical protein; AVI55_07460                                                    N/A                 PiscirickettsiasalmonisMISFKELNNNEFYKELVNSKEVTNILDCPILSKRDYDRTINSLNKCYEYTEPFWSSVYWSPTGGSTSSNSKSMYFPWDNDESEKQRSLMGKALSNTSIGVFSKNNVVANLFTGTSMYRSLELFNKLVTNAGVTSLPIGSNCSNEDTHEFLEHFNADIIAGPPVTIADYASYYLKNGGNNSISGIFYATNPLFPAQEHIINKAFNNPDIFSVYGSAETGPWAFYNSKILDKNKFIIVSSIADVEIVDQDDDGFGDIVVTIKVRKRFPVVRYSIGDIGKLSEFNLDGKNYQLLEVKGRNSQWLSYADMQIELDKISSELNYYLDWKIVQYFEKNSNVEVVNIRVLSDGNNIELLKLEDKFNTLLHVSEFKGALKVNVEFVSLEGLIKSKISNKVIKIFDIRNS
complement(1549962..1551050)       hypothetical protein; AVI55_07465                                                    N/A                 PiscirickettsiasalmonisMDIAGAKCQTSYQNCIAKYVKISGLLCVSVLLLAIFFSLFTYYYIGLLAAKFILIYSIGFIPFIFSSALRYILLAKSYSKIIKITNIITFIICISVTLACYYLFESVSIVSFAYGCIIGFLYNFFHLLHFSLKMNIINISFFKCIKYIKSSECLSFIYEGFKVSLVYASDSIICAIIIMLTLSYGESYVIAVQITLQLFLFASFWITGFANGLMIELPKYKSVYKSKKSLKLIIRYIFKNSIIYFLLVSLIFILFSKIILEYIFNLHGLSYKVAHIEVYMVAILVLFDFIRQSLFYILRLFNQVMGAVIISYICLFFSVFLMFLVKFMDKSPVYFLFLYILSCLVILIIYFIKIYNNNFLRS
complement(1551241..1552464)       hypothetical protein; AVI55_07470                                                    N/A                 PiscirickettsiasalmonisMKHLVPSYLDSSKYSLDYDNFISKISSKMDLENYGTRFSPYLLDVPMSILNQVEEIHPVLVKAIIQIVNNYLLDDDLQEILKLDDRKLSLIKLASEAPYQLFSIRPDFLISENNEVKLCEINARFTINGFMGSYYTHLQTKEDYSENQGIEDKIARLIDNYTSRFDLSKPLFLMRQNETGYDLNLLKIFLIDRGVDIIDIEPQDLSLANKKLVAKGVECKQLIMELHQNELENISDDILEHIILNVNYVNDIRTIFITHDKRLFSILSNSKIMNRYLSNEEVGILSKHIIETYLLSKAKDEVINNKNNWVLKKCLSGKGEGMYIGAEASLPEITNVIDNQAAQYIAQPFLAQKKIEIFIDGEYRTCNAVGMILSLNGAYQGTGIFRVSPNSIIAVSRGGCIVVPSFS
complement(1552514..1553314)       hypothetical protein; AVI55_07475                                                    N/A                 PiscirickettsiasalmonisMSAIDIEDVYEYSQPIRLPQMCFQTLDFPEQAVPSSLYKHVLNKMGVLIVSLSYEEDSPKTLEKIVALLGEAHTHSTGNDAVWHIKQGGSKGNEALARSHKLSEFVLHTDCSYEKQVPDFFALHCIRHDRFEGGKNLLVDCSTLIQHLTPESFEALQNDPVEIIVPPEFKRDIESINARVIDQNFNVRYRKEILKSEVLTPALQSALEEFERLCHSPVLNRKLELKDNQILFLDNKRYLHARTTIKDKDRHLMRIRFFTDFNKFSN
complement(1553311..1553709)       hypothetical protein; AVI55_07480                                                    N/A                 PiscirickettsiasalmonisMITFELNQSSDRMQLIANSLASLRSSLSTRFDIKLNLVIEEVVENIFNNNANIDLYVKITINFSVDNKGKISILFCDNGSEFDLTNYQFKGIPNQDVSRGRGIYLIKHYASSISYKRNQHLNILKIMIGDKK
complement(1553706..1554023)       hypothetical protein; AVI55_07485                                                    N/A                 PiscirickettsiasalmonisMLIMKVLIVKENDVMIVNLYGRLDARTAAEFEKKIQCDLVPVKKNVCLDCQELEYISSAGLSALILLAKELKSNDCALVLSNLQPMVSDILHVTGLIDKVFTVQP
1554338..1554355                   attL                                                                                 N/A                 CCGGCACTGTTGCGAAAA
1554408..1555136                   PROPHAGE_Brucel_1330: transposase, putative; AVI55_07490; phage(gi23502708)          6.87e-49            PiscirickettsiasalmonisMARRKRFKKNQPFKWKHYSGEIILWLVRWYGRYALSYRDLKEMTGERGLELERSTICRWVHEYGPEIAKRLRPHFRQTCASWRLDETLVKIKGRWYYLYRAIDKYGHTLDWMLSRQQNAKAALRFFKKAIAQPYVKSPRVVNVDKHASFPPAHQKAKDEGVFSRRCKLRRVKYLNNCIENDHKAIKRKSRFRQWYQSLSTARSTIDVMEAMRMVQKGQLRYIKKQDICAQNQLIDKLFGLAA
complement(1555177..1555821)       hypothetical protein; AVI55_07495                                                    N/A                 PiscirickettsiasalmonisMLIFGIHFQTPLWLLCLPIVIIIILFLWWQNKNHQHLHAICDSHLLPYLLQGQSSGQKLIFWILGLSWFIAIFALAGPSLKQNKPLLYQSSYSRIFVLNLSKSMLAQDTQPNRLSIARFKLLELLKQSQDIRTALIVFSQRAYIVSPLTKDSQTISATVPLLSPKLMPATGNNPATGLDQALKLFEQAKTGQGQVILITDSAGQKKRHCCEKLS
complement(1555834..1556301)       hypothetical protein; AVI55_07500                                                    N/A                 PiscirickettsiasalmonisMKYPKNSRVLILLTDGTSNSGALSPTLAAKLAHSEKIKIYTIGLGASEISLKTPFGTRYLNPSHNLDTATLKAIANITKGQFFRAQDLNSLEQIYHAIDNLEPSKSISHNLRPEHPLYQWPLAIALLLSLVTSLRFILVNLRSIQKLNKLKKIKE
complement(1556356..1557330)       PHAGE_Spirop_1_R8A2B_NC_001365: putative transposase; AVI55_07505; phage(gi9626114)     5.82e-29            PiscirickettsiasalmonisMIYRHLNEKDRFYIEQRLSEGDSLRSIARALGFSPSTISREIKRHTPIDFKGLYCHRLTSRCAQEKRANAKQGQAFQQISEEEKMLIHQRLSTHTSPDVISQELIREHNIQVSESTIYRYIYDDRERGGELYKNLPHSGKPYKKKVSRGDQTKIPNRVGIEQRPAIADEKTEFGHFEIDTVVGRDHQSYLLTLVDKANKMCCIRKMPNKQAKTVINTFMNVVGSTFFDFKTITSDNGTEFAGHEAISKITEADFYFARPYRSCDRGLNEHTNGLIRRFLPKGTDFNEVSDKEIAKIEHTLNTRRRASLNYRSPNHVFLEYLMAA
complement(1557360..1557959)       hypothetical protein; AVI55_07510                                                    N/A                 PiscirickettsiasalmonisMIQFAWPWFFALLPLPFLVPFILPCAKQNQALLQVPFFQQLNQFSINQKKHKRQYKDKFSAYFIWGLLIIAAANPVWIGQSIYQPIAGRNILLAVDISGSMKEKDMHLNNTPVTRLTIVKKAAAYFIKERKHDRIGLILFGSNTYLRTPLTFDHITVLSMLNNAITGLAGPKTAIGDAIGLRPPSSEVQHRVESSYPYR
complement(1557956..1558417)       hypothetical protein; AVI55_07515                                                    N/A                 PiscirickettsiasalmonisMSNHSPLSLLKDIHAPEAVSGWPPAPGWLILISIVIILFIVLSYFLKKYRNRQKVKLYGLNSLYDIPQHSNSHYAKECNALLKRVAHYYFPEQNIKILSEKKWHDFLILKLPKKHHNIAITQVNYLITSLYQPEIISNIELKKFVQLWIKECR
complement(1558461..1559396)       hypothetical protein; AVI55_07520                                                    N/A                 PiscirickettsiasalmonisMFTSTPHIEPAKGTTSHIADLLQLTQQARRLPIRLAHFAKSPTSGPHPSIFRGRGMEFEEVRHYQPGDDVRAIDWRVTARTGQLHTKIFRQEHERPFHFIVDHSHSMQFGTRVCFKSVMADYSCAALAWLAFHHGHRIGGAIVHEQPIWLKSQAGKKGLFSLLNKMTTTHAPHQSQQLSNTLEQFIHHSRGGEILIIFSDFFDFSEHTQSLLKQLSYHYDIACIHIQDPLEQRLNQQGNYHFSNGKQTVNITIRSQKDKKYYSDYMSKLHEEKQHFFIKNGIAYCTISTDQDPIVALEQAITDQPLLRRQL
complement(1559424..1560419)       PHAGE_Acidia_virus_NC_007409: hypothetical protein; AVI55_07525; phage(gi75750456)     4.60e-08            PiscirickettsiasalmonisMPLDHQLTDNQSLQDQFIHLQDELNHHIIGQKELLLMLQIALLADGHLLVEGAPGLAKTTAIKALSHYVEGDFQRIQFTPDLLPSDITGTDVFRPQTGEFYFQHGPLFHPIILADEINRASAKVQSALLEAMGERQITVGNTTYPLPQLFLVMATQNPLEQEGTFPLPEAQLDRFLLHVEIGHPNRQEEAEILKLVRQNQDTLQPKNQINHYLSQEVIFAARQECQQIFLSPAIEEYIVQLIIATRLPEQYNKELAHWLRIGASPRATIALERCARAHAWLANRSYIAPDDVHQVLFNILRHRLLLSFEAQAQGITTNQCIQRILETVPTP
complement(1560633..1561595)       PHAGE_Prochl_P_TIM68_NC_028955: putative zinc-containing alcohol dehydrogenase superfamily protein; AVI55_07530; phage(gi971760362)     9.81e-05            PiscirickettsiasalmonisMKVMIINQFGDSDVLQLADIPVPSIKDDEVLIQVSHTSVNPADWKIRAGLYEYLLPYKFPIILGWDAAGVISEVGCKVSRFKKGDRVFSYCRKPVIQQGSYAEYLAIDADAVAHIPNNISFAEAATIPMTGLTVWQCLFETIRLTAGQTILIHGGAGGIGSIAIQLAKLQQTTVYTTASLHNHDYVYSLGADIAIDYQNQDFVKEIAAREPAGIDLVLDTRGGEVQQNSYQIIKKGGHLISLVTPPDDDEAAAYQVHAEFVFGYPNGEQLKELAKLLEKKQLKPTIYEEMSLEGAAIAHDMNRNGRLERGKLVLHITPSS
complement(1562185..1562463)       PHAGE_Entero_P1_NC_005856: InsA; AVI55_07540; phage(gi46401643)                      1.72e-18            PiscirickettsiasalmonisMPHIEVNCPQCSENDVIKFGRNASGNQRYKCKNTGCDKDTFLLNYKRPGDLPETKEKIIDMSMNGSGIRDIARVLKVSTNTVMKELKKSQVS
1562667..1562684                   attR                                                                                 N/A                 CCGGCACTGTTGCGAAAA
complement(1562735..1563463)       PROPHAGE_Brucel_1330: transposase, putative; AVI55_07545; phage(gi23502708)          6.87e-49            PiscirickettsiasalmonisMARRKRFKKNQPFKWKHYSGEIILWLVRWYGRYALSYRDLKEMTGERGLELERSTICRWVHEYGPEIAKRLRPHFRQTCASWRLDETLVKIKGRWYYLYRAIDKYGHTLDWMLSRQQNAKAALRFFKKAIAQPYVKSPRVVNVDKHASFPPAHQKAKDEGVFSRRCKLRRVKYLNNCIENDHKAIKRKSRFRQWYQSLSTARSTIDVMEAMRMVQKGQLRYIKKQDICAQNQLIDKLFGLAA
1573140..1573163                   attR                                                                                 N/A                 TCACACAGCGTTACGTGCCTTGAA
1575103..1575121                   attR                                                                                 N/A                 CTAATGGCACTACCTTAAG
1577226..1577237                   attR                                                                                 N/A                 ATAAAATTAAAT
