gi|00000000|ref|CP013934.1|  Weissella cibaria strain CMS3, complete genome. 2342907, gc%: 45.32%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1502668..1502679                   attL                                                                                 N/A                 TTCACAAGTTGT
complement(1502797..1503591)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; AUC62_01441; phage(gi48697274)     4.51e-37            WeissellacibariaMGHRITSVLSALNIARSTYYQWKNWQPSQRETRRTALKTAIKAVYNTNRGIYGYRRIAAFLRFILKTDVGDRLVWELMNELNLKSRMVKKSYKKPTTTTDTPQKPNLMKKLDDLSGVLATDITYIQLMNREWVYLATVYDPEKRRVVSYGLSPEMTKEFATSVVVKALRANGKPKMIHSDMGSQYTSSLFEGTLQNSGINHSYSRKGHPYDNARIESFHSLIKREMIYHEEYRTIDDVRVSVEWYVNWYNNSRINSRTDWLQTA
complement(1503639..1503899)       PHAGE_Paenib_Shelly_NC_041909: membrane-associated initiation of head vertex; AUC62_01442; phage(gi100034)     1.65e-09            WeissellacibariaMIRYSPEFKQSLVEMHNQGRSYTELAAEYGPSADSIRNWVKLYTVHEVDGEKWTQADVNALQKENAKLREELEILKRAAVLLSKYN
complement(1503926..1505047)       PHAGE_Entero_phiFL2A_NC_013643: portal protein; AUC62_01443; phage(gi281416526)      3.49e-134           WeissellacibariaMSIDFLRKGRFNPNANDVFFMNADDYAIMDPAAEGFINQLDRFINRHKSSQVNRLKALKRYYLADNDIRYKEPKSDKTAADNRIASDFARYITIFEQSYMLGKPVVYKNASDKTLQEEVDDFSKQNNESYHNVLIKTDLSIYGRAYELLYVDGDENNVQVRLARLNPEQVFVVYDDTVQRNSLFAVRYYRVRYEEGKFRDFVEVYTNDKVYYYRNDNQEAGGMKFVEETTHEFNGVPVTEYASNEDRTGAYEAVLDTIDAYDLAQSELANTQEDFNNALLMIKGNPFTGSDDNPVIVDDSGTERPNPNFIGNVVAQMKQARLLIMDDNPDENGAEPGAEYLTKSYDSDGTKAYIDRLAGCSYARFTDRFFSAL
complement(1505056..1506336)       PHAGE_Lactob_Lj928_NC_005354: hypothetical protein; AUC62_01444; phage(gi41179314)     7.70e-170           WeissellacibariaMSKNEQLTLEFPKPARVFNKQVFDYLYDYDSRVDLWYGGASSGKSAGVVQKVILKALGDWKIPRRFLILRKVGATVKDSIFEDFISRLTEWGLMPYAKVRNTDYRIKLSNGAEFIFKGLDNPEKIKSVKGISDVMMEEATEFTLDDFNQLDLRLRERKHPQKQIFIMFNPVSKANWVYKQFFERTDPDTKIHLSTYKDNKFLDDANRRRIEQLSETNGAYYKIYALGEFATLDKLIFPKYEKRLLRADSDELKGVPSYFGLDFGYTNDPTAFVHIKLDVENKVLYILEATGKTGMLNGEIAQMIKDLGHSKETIIADAAEPKSIAEIRKAGIDRITKARKGPDSIRHGIEYLQQFKIVVDERLFQVIEELDNYTWQKDKKTGEYINKPVDSFNHFLDAVRYAADKQSLKSADSFEQKLIKARTYFG
complement(1506329..1506751)       PHAGE_Thermu_OH2_NC_021784: terminase small subunit; AUC62_01445; phage(gi526118336)     1.17e-19            WeissellacibariaMSLNERQERFVDEWVRNGGNGAQAAREAGYSARTARSIAQRLLTNVDVKEAIQARQAELREQRRMTTDNVIEFFEKVVQGEIGEQEVTPSGKVIEVPTKVNNRIKAAENLGKVLGIFQAESVVEVKPIVVMGDYTEDEDE
complement(1506819..1506900)       tRNA                                                                                 N/A                 GCCGATATGGCGGAACTGGCATACGCAGCGGACTTAAAATCCGTCCCTTAATTGGTTGTGGGTTCGAATCCCACTATCGGCA
complement(1506990..1507063)       tRNA                                                                                 N/A                 GTTCCTTTAGCTCAGTTGGTTAGAGCAGACGGCTCATAACCGTCCGGTCACTGGTTCGAGACCAGTAGGGAACA
complement(1507850..1508263)       PHAGE_Lactob_Lj928_NC_005354: hypothetical protein; AUC62_01448; phage(gi41179310)     1.64e-06            WeissellacibariaMALLPAVNEKATREAVRDFFDSEWPRIVNMADMGYVDLKSVEISDMPSARSFGNANDERFTNHTDAVYYYDAVVHAIKVMTQPHRHFMWLRYVRHLEWLQVEALTGYSTRRGQEIIDEAFLLFADKFADVDDLRVKE
1517700..1517711                   attR                                                                                 N/A                 TTCACAAGTTGT

#### region 2 ####
1496748..1496759                   attL                                                                                 N/A                 ACTAGCTTACCA
complement(1510813..1511538)       PHAGE_Lactob_LF1_NC_019486: DNA replication protein; AUC62_01457; phage(gi418489432)     2.23e-27            WeissellacibariaMNTTSDWVRELRQRGLTPKTLTPEERAEKEKADAERITKAWQAQERVKYQRMSLWGETETRSFEFEDWNPQIQRNEQTARDIGNQAYAMTNEMRNGLFNVFLFGRAGAGKTSLALAMMSRLSDRYTTMFVSVVEWRNLKFKSFKDNKVAERLNLTEKFMREVEVLVLDDFGKETQAEAKETVSSMLFELADARRGKATIITSNDDLTGLALKYDQAVLSRLITKDIKHIITTNKLDDVRKV
complement(1511538..1512338)       PHAGE_Lactob_LF1_NC_019486: DNA replication protein; AUC62_01458; phage(gi418489431)     1.11e-50            WeissellacibariaMAQRRMLSKKVTDTDAFLDMPLSTQALYFHLNMHADDDGFVGNINTIKRMIGASTDDEKLLLAKQFLIPFEDSGVVVIKDWRIHNYIRKDTYNATMYSEERRKLGVSESGSYYVDEPSTERPRIVDDTATQVRVGKVSIGKSKVSEGKVSENTTDQPTGPLRNQLADLVAMHGFADHLTPLQLNQLLEYVTEDGMEIGVLNLALQDASNRAIRNFKYVDAILRAKLNEGVKSVADWHAGKETHKQAVADEKVPDWMQELNDKLEGS
complement(1512301..1513011)       PHAGE_Brocho_NF5_NC_015252: gp49; AUC62_01459; phage(gi327197634)                    9.55e-44            WeissellacibariaMNFIGKITEINGRYVTVKVDDSLSLGLINSVNDDEHPEVDVTVVDKRLISPVQRRKTYAILRDMSDFFGYTLDEMKNVMKGLFYETMDAHEFSLGNTDITTARTFISFLLEFALKYHIPMRKPALEYQDDLDVYMYQSLKNRSCVICGLAADVHHVDTVGMGNDRRTVDHREKHLIALCRAHHNEAHNIGWPVFAQKYHVKGIKLDPETLQRLGIMTFKRMEEIDGTTTNVKQESY
complement(1513025..1513870)       hypothetical protein; AUC62_01460                                                    N/A                 WeissellacibariaMDFAERMRKNERISTNNSVLPPFPGMFLAFNASEGKFSIMEPGADFSEANDIKSITILPHFMMNRVKWTRGTDEKALSNYVVTDTEERQPYVITIDGETYTAETMMELKQQIVLGQNEQLKQEEIYVGYATALDDVPQKKPLVVWYVSRGVNAYVLNDAIDGDLTGRSIIKLENKGTTRKNNSGSINKVLDFKVDEIAEDKVEGMLKWVSQDSSDKIVEAYRDDMINAAMTTSNPAPTVLGTQQNSEDDVPDVPPFNGTPALDPFGQPINEVGISDDELPF
complement(1513881..1514807)       PHAGE_Lactob_Lj928_NC_005354: putative replication protein; AUC62_01461; phage(gi41179303)     2.44e-22            WeissellacibariaMNELVVNPANVTPAIVEVTGVDELEQYVDGMLATYKKTPVSAATLAQAKQARTDLNKAYKGLGETRRNIADKVAGNWPDTEKRLKEIEKKIQSVSDGTLKPQIDEVVEADKQDRKTLILIEIEKIATEYNLPAEKIQFDDKWLNKTAKWAETEQTVRSQFENIKNEVQVRELQTSAVEAYAAELQMDPAGVAGYVGQLDYKDLDEVKASMKKDVRLAKARFAAERARAQADFDAKVKRAEQATKIGNKLVDQETGEIIEEPEALKRTYIIQLSDITDQQFAYVEQFIHNKFDKGFEASGVTYKSAVQR
complement(1514804..1514899)       hypothetical protein; AUC62_01462                                                    N/A                 WeissellacibariaMFDELIDPPDDPEDNEEAFNNYMDEYEDKDL
complement(1514892..1515035)       hypothetical protein; AUC62_01463                                                    N/A                 WeissellacibariaMKNELRVEALRHMNRAFKAEQRDNNDGTVSEFETGVADVLNWVADHV
complement(1515116..1515643)       hypothetical protein; AUC62_01464                                                    N/A                 WeissellacibariaMDYKGPTGVGNIHYNFAKPVKFDVEAEKERIRKSGVERPNKALPEYERRYRRFAKFLSDYMVGKNADERDDLVSQASQVSGLSFITASNSRYLGRFLRERSEAELEGTPFNKPNITSAVGYEDRYKTFKRAMDSKRPEQSFSYIATPIAKQLRMSLASLYNTKYKGRYDKENKNA
complement(1515633..1515821)       hypothetical protein; AUC62_01465                                                    N/A                 WeissellacibariaMKISDYQMVRNFAEGRGFFNYEVQTLPVGGVRVGFKTKRGGQVWFDDKQEVIDYVLEATNGL
complement(1515811..1516035)       hypothetical protein; AUC62_01466                                                    N/A                 WeissellacibariaMWIIDALKLVGWQALQATLLFVAAGWLVIANRVRLAWFLKGILRMVVYPFVFLANGYDAAEALKPTGKLVRYED
complement(1516085..1516318)       hypothetical protein; AUC62_01467                                                    N/A                 WeissellacibariaMARFSEEKATIDELEQLRVVGQVGARRILGRSLWYFKEHIRYSKKFMQNVPNKTPGAYKPTYLVSDVLRYRKLNDWW
complement(1516321..1516530)       PHAGE_Clostr_phiMMP01_NC_028883: putative repressor; AUC62_01468; phage(gi971820019)     3.17e-05            WeissellacibariaMSLGNFINMVLKNKGLTNYWLSGVTGIDKTTLYSLKVGKLRTLTLRNMIKVAIALDIDLNELKKIDWED
1516651..1516929                   PHAGE_Clostr_vB_CpeS_CP51_NC_021325: hypothetical protein; AUC62_01469; phage(gi509140075)     1.57e-22            WeissellacibariaMPKPYIITYDLNEPGKKYDDVAAAIKSSARTWTHYLESTFIITSDLSADQIQKNIKPYLDNNDALFISELAANNHQGWLNRDQWDYLREHVF
complement(1516926..1517144)       hypothetical protein; AUC62_01470                                                    N/A                 WeissellacibariaMKNKTVKVENVHVEGLDELKKLSQDLLEQAEQLSNTIERFNQLKLIISTRNDRFIPEDNDGIKCGNPVSKNF
complement(1517147..1517884)       PHAGE_Lactob_LL_H_NC_009554: hypothetical protein; AUC62_01471; phage(gi148750866)     1.09e-43            WeissellacibariaMTNEVQVFNGLKIKEVNGQVMFEAESAATGLGLTKISKGQQYVRWERVNEYLGLSTSGQLVKRGDFITEPQFYKLAIKANNDTAERFQDWVTTEVLPSIRKTGSYQAKPMTEMEIVAATANKLVQQEKQLTQIVERQNTTEMQVAELKNEFGLPAKVAGKLKKLGASRVYFWLGGKDTNAYREVSAKVFSEMWRDFKNHFGELDSYTSLPMDQLQAGRDYIRNWRPSTNTVMDIERLNAQMELEV
complement(1517895..1518122)       hypothetical protein; AUC62_01472                                                    N/A                 WeissellacibariaMTATTIEEQENALKRKIKKRINDEMWERDDMKQWELAEMIGEGVSQTNRAINGETSPKSKTIRNKIFTLFNITDL
1518209..1518418                   hypothetical protein; AUC62_01473                                                    N/A                 WeissellacibariaMSNIADRIVDFVQSKQPDENRYMSVHLSNGDSVSFSSVLSYENDVLVIKAEKRTHFVDANSIVDFVVHD
complement(1518415..1518543)       hypothetical protein; AUC62_01474                                                    N/A                 WeissellacibariaMSSETLEVIETLIVEIAKAPETKTSSEMVTAISELVAAINQY
1518801..1519142                   PHAGE_Lactoc_bIL310_NC_002669: immunity repressor; AUC62_01475; phage(gi13095874)     3.20e-17            WeissellacibariaMTVYERIKEISKTRGMSLQQVAKSAGLSQNMIYQYKNVNPKAETLQTLADVLGVSVDYLLGNSDNMHPVDKTDERDGDLKDYFEKHPILQYDGNPIPEAELKIIRRILEDMDD
1519135..1519542                   PHAGE_Lactob_LF1_NC_019486: Lj965 prophage repressor-like protein; AUC62_01476; phage(gi418489418)     1.21e-11            WeissellacibariaMTDLLNYLLFIAIRNDIKVEFTDLLSPSTPDLSIPSERKIIINENSSIGVHVTFRFAHELAHILFGNDNQDYVYQFSIGTKKESERKAHKRALRIISRFVYNETPMEYRNYVDFMNAFNLPSSFENWAKDAIKAA
1519595..1520212                   SmpA / OmlA family protein; AUC62_01477                                              N/A                 WeissellacibariaMNLFTKYIGIGAVAVLVGSTALQAIPQVGNNHFVTVASASSKSKIKKVKLGMTKKQVKKILGKPDRDDSGMLTYEKYGYLYFSKGKLTGGEDKNIQAQVTKKNAAKKSSKVNKRQTLLSQAKYFGTKDVESIQKATYAYASTEIDGGMMYMWKSKAGKLIRVDLDEYGKTAVYKYDDSKDNGLGEQLYIGKTILQKKPRTTVVYP
1520591..1520866                   hypothetical protein; AUC62_01478                                                    N/A                 WeissellacibariaMEDKKSLVLIGRIASVMSVLMYVSYIPQILDNLSGHSGDPIQPFVAMLNCIFWTIHGLFGSDGHTRDMPIVIANIPGILFGFTAFITVFIH
1520876..1521241                   Pyrimidine dimer DNA glycosylase; AUC62_01479                                        N/A                 WeissellacibariaMRLWHESLIPKLPRQQLLGQHRECCALRGGGWGKKHATVNYVFDHSPYKLFQYHELVMNEMLSRGYTPNELWLDPLYRGTKEAAYTSLSSEVLTSPIYPEHDNIYLIECIENLREKGINIE
complement(1521277..1521477)       PHAGE_Entero_EFC_1_NC_025453: hypothetical protein; AUC62_01480; phage(gi725950514)     2.29e-24            WeissellacibariaMNFGMRKPSPMRSIKARTTGKAKRAVKQAIIPGYGQKGMGWLTDTKKEAYNKVYKKTTFSIFDLFK
1521680..1522771                   PHAGE_Oenoco_phiS11_NC_023571: Phage integrase; AUC62_01481; phage(gi589286605)      1.14e-45            WeissellacibariaMAVYKTEHGWRADFSFKDASGKYRKKSKRGFKTKKEAEAWLAEYSINHGKPTLQKGSQILFTDYFDEYAKLHLETGMKEATYESWRFQKKIVVDVYFTGLTLDQITRPMYQSFLNHYAIGKKRQTVSKRHRLLRLVINQAFHDGLIQSDPTFGVTIPGSDSKDASEKFLQLDELTTLIEYIENDEKLITWRTGFMVYLISLSGLRAGEALALTKNDIDSDARTINVSKTKQLSGAVTTPKTKTSNRTIVMPNRFFDSYQKFIDAKEHWNSANELFDGRRTPSVVNRWLERLEKKLGFENIISLHGLRHSHVSYLLSSGVDISYASKRLGHSNISITQDTYAHLLQHKQQSEEDKTITLLDQLD
1535044..1535055                   attR                                                                                 N/A                 ACTAGCTTACCA
