gi|00000000|ref|CP013936.1|  Weissella cibaria strain CMU, complete genome. 2362501, gc%: 45.32%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1513150..1513161                   attL                                                                                 N/A                 TTCACAAGTTGT
complement(1513279..1514073)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; AUC65_01449; phage(gi48697274)     4.51e-37            WeissellacibariaMGHRITSVLSALNIARSTYYQWKNWQPSQRETRRTALKTAIKAVYNTNRGIYGYRRIAAFLRFILKTDVGDRLVWELMNELNLKSRMVKKSYKKPTTTTDTPQKPNLMKKLDDLSGVLATDITYIQLMNREWVYLATVYDPEKRRVVSYGLSPEMTKEFATSVVVKALRANGKPKMIHSDMGSQYTSSLFEGTLQNSGINHSYSRKGHPYDNARIESFHSLIKREMIYHEEYRTIDDVRVSVEWYVNWYNNSRINSRTDWLQTA
complement(1514121..1514381)       PHAGE_Paenib_Shelly_NC_041909: membrane-associated initiation of head vertex; AUC65_01450; phage(gi100034)     1.65e-09            WeissellacibariaMIRYSPEFKQSLVEMHNQGRSYTELAAEYGPSADSIRNWVKLYTVHEVDGEKWTQADVNALQKENAKLREELEILKRAAVLLSKYN
complement(1514408..1515529)       PHAGE_Entero_phiFL2A_NC_013643: portal protein; AUC65_01451; phage(gi281416526)      3.49e-134           WeissellacibariaMSIDFLRKGRFNPNANDVFFMNADDYAIMDPAAEGFINQLDRFINRHKSSQVNRLKALKRYYLADNDIRYKEPKSDKTAADNRIASDFARYITIFEQSYMLGKPVVYKNASDKTLQEEVDDFSKQNNESYHNVLIKTDLSIYGRAYELLYVDGDENNVQVRLARLNPEQVFVVYDDTVQRNSLFAVRYYRVRYEEGKFRDFVEVYTNDKVYYYRNDNQEAGGMKFVEETTHEFNGVPVTEYASNEDRTGAYEAVLDTIDAYDLAQSELANTQEDFNNALLMIKGNPFTGSDDNPVIVDDSGTERPNPNFIGNVVAQMKQARLLIMDDNPDENGAEPGAEYLTKSYDSDGTKAYIDRLAGCSYARFTDRFFSAL
complement(1515538..1516818)       PHAGE_Lactob_Lj928_NC_005354: hypothetical protein; AUC65_01452; phage(gi41179314)     7.70e-170           WeissellacibariaMSKNEQLTLEFPKPARVFNKQVFDYLYDYDSRVDLWYGGASSGKSAGVVQKVILKALGDWKIPRRFLILRKVGATVKDSIFEDFISRLTEWGLMPYAKVRNTDYRIKLSNGAEFIFKGLDNPEKIKSVKGISDVMMEEATEFTLDDFNQLDLRLRERKHPQKQIFIMFNPVSKANWVYKQFFERTDPDTKIHLSTYKDNKFLDDANRRRIEQLSETNGAYYKIYALGEFATLDKLIFPKYEKRLLRADSDELKGVPSYFGLDFGYTNDPTAFVHIKLDVENKVLYILEATGKTGMLNGEIAQMIKDLGHSKETIIADAAEPKSIAEIRKAGIDRITKARKGPDSIRHGIEYLQQFKIVVDERLFQVIEELDNYTWQKDKKTGEYINKPVDSFNHFLDAVRYAADKQSLKSADSFEQKLIKARTYFG
complement(1516811..1517233)       PHAGE_Thermu_OH2_NC_021784: terminase small subunit; AUC65_01453; phage(gi526118336)     1.17e-19            WeissellacibariaMSLNERQERFVDEWVRNGGNGAQAAREAGYSARTARSIAQRLLTNVDVKEAIQARQAELREQRRMTTDNVIEFFEKVVQGEIGEQEVTPSGKVIEVPTKVNNRIKAAENLGKVLGIFQAESVVEVKPIVVMGDYTEDEDE
complement(1517301..1517382)       tRNA                                                                                 N/A                 GCCGATATGGCGGAACTGGCATACGCAGCGGACTTAAAATCCGTCCCTTAATTGGTTGTGGGTTCGAATCCCACTATCGGCA
complement(1517472..1517545)       tRNA                                                                                 N/A                 GTTCCTTTAGCTCAGTTGGTTAGAGCAGACGGCTCATAACCGTCCGGTCACTGGTTCGAGACCAGTAGGGAACA
complement(1518332..1518745)       PHAGE_Lactob_Lj928_NC_005354: hypothetical protein; AUC65_01456; phage(gi41179310)     1.64e-06            WeissellacibariaMALLPAVNEKATREAVRDFFDSEWPRIVNMADMGYVDLKSVEISDMPSARSFGNANDERFTNHTDAVYYYDAVVHAIKVMTQPHRHFMWLRYVRHLEWLQVEALTGYSTRRGQEIIDEAFLLFADKFADVDDLRVKE
1528182..1528193                   attR                                                                                 N/A                 TTCACAAGTTGT

#### region 2 ####
1507230..1507241                   attL                                                                                 N/A                 ACTAGCTTACCA
complement(1521295..1522020)       PHAGE_Lactob_LF1_NC_019486: DNA replication protein; AUC65_01465; phage(gi418489432)     2.23e-27            WeissellacibariaMNTTSDWVRELRQRGLTPKTLTPEERAEKEKADAERITKAWQAQERVKYQRMSLWGETETRSFEFEDWNPQIQRNEQTARDIGNQAYAMTNEMRNGLFNVFLFGRAGAGKTSLALAMMSRLSDRYTTMFVSVVEWRNLKFKSFKDNKVAERLNLTEKFMREVEVLVLDDFGKETQAEAKETVSSMLFELADARRGKATIITSNDDLTGLALKYDQAVLSRLITKDIKHIITTNKLDDVRKV
complement(1522020..1522820)       PHAGE_Lactob_LF1_NC_019486: DNA replication protein; AUC65_01466; phage(gi418489431)     1.11e-50            WeissellacibariaMAQRRMLSKKVTDTDAFLDMPLSTQALYFHLNMHADDDGFVGNINTIKRMIGASTDDEKLLLAKQFLIPFEDSGVVVIKDWRIHNYIRKDTYNATMYSEERRKLGVSESGSYYVDEPSTERPRIVDDTATQVRVGKVSIGKSKVSEGKVSENTTDQPTGPLRNQLADLVAMHGFADHLTPLQLNQLLEYVTEDGMEIGVLNLALQDASNRAIRNFKYVDAILRAKLNEGVKSVADWHAGKETHKQAVADEKVPDWMQELNDKLEGS
complement(1522783..1523493)       PHAGE_Brocho_NF5_NC_015252: gp49; AUC65_01467; phage(gi327197634)                    9.55e-44            WeissellacibariaMNFIGKITEINGRYVTVKVDDSLSLGLINSVNDDEHPEVDVTVVDKRLISPVQRRKTYAILRDMSDFFGYTLDEMKNVMKGLFYETMDAHEFSLGNTDITTARTFISFLLEFALKYHIPMRKPALEYQDDLDVYMYQSLKNRSCVICGLAADVHHVDTVGMGNDRRTVDHREKHLIALCRAHHNEAHNIGWPVFAQKYHVKGIKLDPETLQRLGIMTFKRMEEIDGTTTNVKQESY
complement(1523507..1524352)       hypothetical protein; AUC65_01468                                                    N/A                 WeissellacibariaMDFAERMRKNERISTNNSVLPPFPGMFLAFNASEGKFSIMEPGADFSEANDIKSITILPHFMMNRVKWTRGTDEKALSNYVVTDTEERQPYVITIDGETYTAETMMELKQQIVLGQNEQLKQEEIYVGYATALDDVPQKKPLVVWYVSRGVNAYVLNDAIDGDLTGRSIIKLENKGTTRKNNSGSINKVLDFKVDEIAEDKVEGMLKWVSQDSSDKIVEAYRDDMINAAMTTSNPAPTVLGTQQNSEDDVPDVPPFNGTPALDPFGQPINEVGISDDELPF
complement(1524363..1525289)       PHAGE_Lactob_Lj928_NC_005354: putative replication protein; AUC65_01469; phage(gi41179303)     2.44e-22            WeissellacibariaMNELVVNPANVTPAIVEVTGVDELEQYVDGMLATYKKTPVSAATLAQAKQARTDLNKAYKGLGETRRNIADKVAGNWPDTEKRLKEIEKKIQSVSDGTLKPQIDEVVEADKQDRKTLILIEIEKIATEYNLPAEKIQFDDKWLNKTAKWAETEQTVRSQFENIKNEVQVRELQTSAVEAYAAELQMDPAGVAGYVGQLDYKDLDEVKASMKKDVRLAKARFAAERARAQADFDAKVKRAEQATKIGNKLVDQETGEIIEEPEALKRTYIIQLSDITDQQFAYVEQFIHNKFDKGFEASGVTYKSAVQR
complement(1525286..1525381)       hypothetical protein; AUC65_01470                                                    N/A                 WeissellacibariaMFDELIDPPDDPEDNEEAFNNYMDEYEDKDL
complement(1525374..1525517)       hypothetical protein; AUC65_01471                                                    N/A                 WeissellacibariaMKNELRVEALRHMNRAFKAEQRDNNDGTVSEFETGVADVLNWVADHV
complement(1525598..1526125)       hypothetical protein; AUC65_01472                                                    N/A                 WeissellacibariaMDYKGPTGVGNIHYNFAKPVKFDVEAEKERIRKSGVERPNKALPEYERRYRRFAKFLSDYMVGKNADERDDLVSQASQVSGLSFITASNSRYLGRFLRERSEAELEGTPFNKPNITSAVGYEDRYKTFKRAMDSKRPEQSFSYIATPIAKQLRMSLASLYNTKYKGRYDKENKNA
complement(1526115..1526303)       hypothetical protein; AUC65_01473                                                    N/A                 WeissellacibariaMKISDYQMVRNFAEGRGFFNYEVQTLPVGGVRVGFKTKRGGQVWFDDKQEVIDYVLEATNGL
complement(1526293..1526517)       hypothetical protein; AUC65_01474                                                    N/A                 WeissellacibariaMWIIDALKLVGWQALQATLLFVAAGWLVIANRVRLAWFLKGILRMVVYPFVFLANGYDAAEALKPTGKLVRYED
complement(1526567..1526800)       hypothetical protein; AUC65_01475                                                    N/A                 WeissellacibariaMARFSEEKATIDELEQLRVVGQVGARRILGRSLWYFKEHIRYSKKFMQNVPNKTPGAYKPTYLVSDVLRYRKLNDWW
complement(1526803..1527012)       PHAGE_Clostr_phiMMP01_NC_028883: putative repressor; AUC65_01476; phage(gi971820019)     3.17e-05            WeissellacibariaMSLGNFINMVLKNKGLTNYWLSGVTGIDKTTLYSLKVGKLRTLTLRNMIKVAIALDIDLNELKKIDWED
1527133..1527411                   PHAGE_Clostr_vB_CpeS_CP51_NC_021325: hypothetical protein; AUC65_01477; phage(gi509140075)     1.57e-22            WeissellacibariaMPKPYIITYDLNEPGKKYDDVAAAIKSSARTWTHYLESTFIITSDLSADQIQKNIKPYLDNNDALFISELAANNHQGWLNRDQWDYLREHVF
complement(1527408..1527626)       hypothetical protein; AUC65_01478                                                    N/A                 WeissellacibariaMKNKTVKVENVHVEGLDELKKLSQDLLEQAEQLSNTIERFNQLKLIISTRNDRFIPEDNDGIKCGNPVSKNF
complement(1527629..1528366)       PHAGE_Lactob_LL_H_NC_009554: hypothetical protein; AUC65_01479; phage(gi148750866)     1.09e-43            WeissellacibariaMTNEVQVFNGLKIKEVNGQVMFEAESAATGLGLTKISKGQQYVRWERVNEYLGLSTSGQLVKRGDFITEPQFYKLAIKANNDTAERFQDWVTTEVLPSIRKTGSYQAKPMTEMEIVAATANKLVQQEKQLTQIVERQNTTEMQVAELKNEFGLPAKVAGKLKKLGASRVYFWLGGKDTNAYREVSAKVFSEMWRDFKNHFGELDSYTSLPMDQLQAGRDYIRNWRPSTNTVMDIERLNAQMELEV
complement(1528377..1528604)       hypothetical protein; AUC65_01480                                                    N/A                 WeissellacibariaMTATTIEEQENALKRKIKKRINDEMWERDDMKQWELAEMIGEGVSQTNRAINGETSPKSKTIRNKIFTLFNITDL
1528691..1528900                   hypothetical protein; AUC65_01481                                                    N/A                 WeissellacibariaMSNIADRIVDFVQSKQPDENRYMSVHLSNGDSVSFSSVLSYENDVLVIKAEKRTHFVDANSIVDFVVHD
complement(1528897..1529025)       hypothetical protein; AUC65_01482                                                    N/A                 WeissellacibariaMSSETLEVIETLIVEIAKAPETKTSSEMVTAISELVAAINQY
1529283..1529624                   PHAGE_Lactoc_bIL310_NC_002669: immunity repressor; AUC65_01483; phage(gi13095874)     3.20e-17            WeissellacibariaMTVYERIKEISKTRGMSLQQVAKSAGLSQNMIYQYKNVNPKAETLQTLADVLGVSVDYLLGNSDNMHPVDKTDERDGDLKDYFEKHPILQYDGNPIPEAELKIIRRILEDMDD
1529617..1530024                   PHAGE_Lactob_LF1_NC_019486: Lj965 prophage repressor-like protein; AUC65_01484; phage(gi418489418)     1.21e-11            WeissellacibariaMTDLLNYLLFIAIRNDIKVEFTDLLSPSTPDLSIPSERKIIINENSSIGVHVTFRFAHELAHILFGNDNQDYVYQFSIGTKKESERKAHKRALRIISRFVYNETPMEYRNYVDFMNAFNLPSSFENWAKDAIKAA
1530077..1530694                   SmpA / OmlA family protein; AUC65_01485                                              N/A                 WeissellacibariaMNLFTKYIGIGAVAVLVGSTALQAIPQVGNNHFVTVASASSKSKIKKVKLGMTKKQVKKILGKPDRDDSGMLTYEKYGYLYFSKGKLTGGEDKNIQAQVTKKNAAKKSSKVNKRQTLLSQAKYFGTKDVESIQKATYAYASTEIDGGMMYMWKSKAGKLIRVDLDEYGKTAVYKYDDSKDNGLGEQLYIGKTILQKKPRTTVVYP
1531073..1531348                   hypothetical protein; AUC65_01486                                                    N/A                 WeissellacibariaMEDKKSLVLIGRIASVMSVLMYVSYIPQILDNLSGHSGDPIQPFVAMLNCIFWTIHGLFGSDGHTRDMPIVIANIPGILFGFTAFITVFIH
1531358..1531723                   Pyrimidine dimer DNA glycosylase; AUC65_01487                                        N/A                 WeissellacibariaMRLWHESLIPKLPRQQLLGQHRECCALRGGGWGKKHATVNYVFDHSPYKLFQYHELVMNEMLSRGYTPNELWLDPLYRGTKEAAYTSLSSEVLTSPIYPEHDNIYLIECIENLREKGINIE
complement(1531759..1531959)       PHAGE_Entero_EFC_1_NC_025453: hypothetical protein; AUC65_01488; phage(gi725950514)     2.29e-24            WeissellacibariaMNFGMRKPSPMRSIKARTTGKAKRAVKQAIIPGYGQKGMGWLTDTKKEAYNKVYKKTTFSIFDLFK
1532162..1533253                   PHAGE_Oenoco_phiS11_NC_023571: Phage integrase; AUC65_01489; phage(gi589286605)      1.14e-45            WeissellacibariaMAVYKTEHGWRADFSFKDASGKYRKKSKRGFKTKKEAEAWLAEYSINHGKPTLQKGSQILFTDYFDEYAKLHLETGMKEATYESWRFQKKIVVDVYFTGLTLDQITRPMYQSFLNHYAIGKKRQTVSKRHRLLRLVINQAFHDGLIQSDPTFGVTIPGSDSKDASEKFLQLDELTTLIEYIENDEKLITWRTGFMVYLISLSGLRAGEALALTKNDIDSDARTINVSKTKQLSGAVTTPKTKTSNRTIVMPNRFFDSYQKFIDAKEHWNSANELFDGRRTPSVVNRWLERLEKKLGFENIISLHGLRHSHVSYLLSSGVDISYASKRLGHSNISITQDTYAHLLQHKQQSEEDKTITLLDQLD
1545526..1545537                   attR                                                                                 N/A                 ACTAGCTTACCA
