gi|00000000|ref|CP014119.1|  Staphylococcus epidermidis strain FDAARGOS_153 chromosome, 2497739, gc%: 32.25%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1146574..1146585                   attL                                                                                 N/A                 TAATTTAATAAA
1146624..1146635                   attL                                                                                 N/A                 ATTTCAATGATA
1149005..1150471                   PHAGE_Staphy_42E_NC_007052: ORF012; AL514_06035; phage(gi66395520)                   1.42e-43            StaphylococcusepidermidisMWENKFAKESLTFDDVLLIPAASDVLPSDVDLSVKLSDKIKLNIPVISAGMDTVTESKMAIAMARQGGLGVIHKNMGVEEQADEVQKVKRSENGVISNPFFLTPEESVYEAEALMGKYRISGVPIVDNQEDRKLIGILTNRDLRFIEDFSIKISDVMTKDNLITAPVGTTLDEAEAILQKHKIEKLPLVENGRLEGLITIKDIEKVLEFPYAAKDEHGRLLAAAAIGTSKDTEIRAQKLVEAGVDALIIDTAHGHSKGVINQVKHIKETYPEITVVAGNVATAEATRALFEAGADVVKVGIGPGSICTTRVVAGVGVPQITAVYDCATEARKHGKAIIADGGIKFSGDIIKALAAGGHAVMLGSLLAGTEESPGATEVFQGRQYKVYRGMGSLGAMEKGSNDRYFQEDKTPRKFVPEGIEGRTAYKGPLQDTIYQLMGGVRAGMGYTGSENLKKLREEAQFTRMGPAGLAESHPHNVQITKESPNYSF
1150638..1152179                   GMP synthase (glutamine-hydrolyzing); AL514_06040                                    N/A                 StaphylococcusepidermidisMEMAKEQELILVLDFGSQYNQLITRRIREMGVYSELHDHEISIEEIKRMNPKGIILSGGPNSVYEEGSFTIDPEIYNLGIPVLGICYGMQLTTKLLGGKVERANEREYGKATINAKSDELFFGLPSEQTVWMSHSDKVIEIPEGFEVIADSPSTNYAAIEDKKRRIYGVQFHPEVRHTEYGNDLLRNFVRRVCNCTGEWTMENFIEIEIEKIRQQVGNRKVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDMVMEQFGEGFDMNIIRVNAQERFMSKLKGVSDPERKRKIIGNEFVYVFDDEAAKLTDVDFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIELGIPEHLVWRQPFPGPGLGIRVLGEITEDKLEIVRESDAILREVIREEGLERDIWQYFTVLPGIQSVGVMGDYRTYDHTVGIRAVTSIDGMTSDFARIDWEVLQKISSRIVNEVDHVNRVVYDITSKPPSTIEWE
complement(1152420..1153325)       PHAGE_Strept_phiARI0131_1_NC_031901: DNA topoisomerase II large subunit; AL514_06045; phage(gi100005)     9.30e-08            StaphylococcusepidermidisMSSTRKPKLDYEEQIKKLKSLGILFNEITEEEAKEILKNNTYFFKLISFRKNIKKDSSGNYNFEFSALSDFATLDMRLRYTLLPMCLDIEHSLKTDILKKITDDVNEDGYTIVQDFINNHNGDLEKIFSSVIKRDGTVIPSFQKYYDDPPIWVCLELMTFGQFSAFVEFYSERTNDSELRKAGKFIKFAKNIRNKCAHSQPILLNLNPRKNFTVERELKKIGRKQRLSDKNLKVLAIIDILALLVLHSKYCSKGIKDNRKNDLLTFKQRKNRYFHHYRNVPSLSFFFLSLNKMIDYYVQNN
complement(1153328..1153855)       PHAGE_Staphy_PT1028_NC_007045: ORF002; AL514_06050; phage(gi66395166)                1.92e-63            StaphylococcusepidermidisMRIGELLAIQPENIDFKNKKLIIDGTIHWRKEGNNLGFKDTTKTALSYRTISLTTRSCDILRKVMLENKKAFQWKNMYVDRDFIFTNHKGNPISLTSINRNIQIAAKNVGIKKHITSHTMRHSHISLLSQLGISLRAIMDRVGHTDHKTTLQIYSHVTEQMDKDMMSKLEKVGIN
1153872..1153883                   attR                                                                                 N/A                 ATTTCAATGATA
complement(1153875..1154123)       PHAGE_Staphy_PT1028_NC_007045: ORF002; AL514_06055; phage(gi66395166)                1.11e-06            StaphylococcusepidermidisMVKDDLSIIKNILRYTQKKYNITDKSYIDDVIVPKKATTIEEVKAKRENYLEMNEVHLIAEELKHIANNKRASYIFIYCLYH
complement(1154279..1154482)       PHAGE_Staphy_phi7401PVL_NC_020199: integrase; AL514_06060; phage(gi448244643)        3.65e-06            StaphylococcusepidermidisMRSTKTLSQTNDDVLAWYLIKNGKQSQKEAQKRLNELIEAKLNDKTPTTLKSLTFHDHLMSGLKDTN
complement(1154584..1155138)       PHAGE_Staphy_StauST398_4_NC_023499: putative lipoprotein; AL514_06065; phage(gi588498244)     4.68e-12            StaphylococcusepidermidisMKRLLGTLIAATLVLSACSQNDTKEDENKKSENTTEKKSDDKKDKKTNEDKKSGEQKKSQEKKNNKSMQESATNEQVQSQQQTNNNQQQYSDEYLANNSVSNDDQLSSEEQQKYNENTNENKQNSHVDLNSLPATDFRTDWMSESGQKQVNDLANQKDSGQISQYEFNDRVSDVMNNEIDNQQP
complement(1155248..1155865)       PHAGE_Lister_A500_NC_009810: gp32; AL514_06070; phage(gi157324991)                   2.36e-09            StaphylococcusepidermidisMEEKFNNSQEERQFQQFQEYQKRQEEEKKKKRKKGWLFGCGGCLVLLILIIVGVTACTGTFVNEVDKEINEEGKLDKDKDTKIKSIGETTEIDGVSFTLDNASYTEERNEFADVQADKVIKVDMTVKNNSKEEIPVGGDIKVYVDGKQAKSYPIDNQLIDSLSPNREISGSEGFAINGNPKKIELEFQPLTSFSNKRYIYNIKPE
1157066..1157077                   attR                                                                                 N/A                 TAATTTAATAAA

#### region 2 ####
complement(1675120..1675323)       PHAGE_Staphy_SPbeta_like_NC_029119: hypothetical protein; AL514_08700; phage(gi985761153)     3.99e-13            StaphylococcusepidermidisMKAAEFSTKEIMKELNIRNRTQVKSWWLWYQNEESMFVLYLYPQSLIICLSLHFSTNQCYNLDNEND
1675415..1675919                   PHAGE_Synech_S_SSM5_NC_015289: glucose-6-phosphate dehydrogenase; AL514_08705; phage(gi326784327)     7.62e-13            StaphylococcusepidermidisIYNLFQKGYFENSLTIIGSGLNELTTDEFREKVKNAIQNNIENSKEIGAFLKRLFYKQQDANSKDSYQKFLEMSLELDDKFDLKENRLFYLAMSPKFFGVATNHLKESGLTNVKGVMRIIIEKPFGDDLKSAKNIIKESLLRRKNIWNSLFRRNDSKYTSTILA
1675926..1676075                   PHAGE_Synech_Syn19_NC_015286: glucose-6-phosphate dehydrogenase; AL514_08710; phage(gi326783556)     1.65e-12            StaphylococcusepidermidisMFEPLWNNKYISNIQATSSETISIEYRGGYYESSGALKFMVQNHLLQMV
1676152..1676397                   PHAGE_Synech_S_SM2_NC_015279: glucose-6-phosphate dehydrogenase; AL514_08715; phage(gi326781985)     1.74e-08            StaphylococcusepidermidisMKCFNPNEIKESFVRGQYDGGMMNNEFVPAYRNEPNVNSQSNTETFVAGKIEIENSKWASVTFYIRTEKRMKKIYPNRYRV
1676406..1676783                   PHAGE_Synech_Syn19_NC_015286: glucose-6-phosphate dehydrogenase; AL514_08720; phage(gi326783556)     1.03e-06            StaphylococcusepidermidisMQFYYSNCEQNASNLLVINVQPNEGFSLCVNGKKSNQNNEMQKVKLSYTMPIKDKMNTVDAYENLIYDTLIGEQTKFTHWEELKILGNLLMILKMYGNKNSHSFLIMPLDAMGLKKVKNYLVKTD
1677148..1679160                   PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; AL514_08725; phage(gi371496158)      3.06e-06            StaphylococcusepidermidisMTINQKRFNGNSRSTVGTVSDIYASVRLLWSRIGEPFVGYSDAYSFNSPKGMCKTCEGLGYIEDINLDELLDWDKSLNEGAIDFPSFGPDKERGKAYRDSGLFDNNKKLKDYTKDELELFLYQEPMTLKNPPKEWRKSAKYVGLIPRFSRIFLGDKEFNKKRYAKHLKNVVNNKICSTCKGQRLNSKILSSKIMSKNISDFTQMTIKENLEFLNKLEDPTAKYIIDPLKKQLEALEYIGLSYLTLNRVTTTLSGGEAQRLKLIRHLNSSLSDLVYIIDEPSVGLHPEDIAKINEILKSLKEKGNTVLIVEHDPDVIKEGDYIIDMGPGSGKNGGEITFEGTYNELLSSNTSTGNALRNKHNLKENIREANHFYNIGPVTQNNLNNVKTSIPKHVLTVLTGVAGSGKSTLVKAGFENNDHTIFIDQKAVQGSNRSNLLTYLGVFDSVRSYFSKETGLNKAMFSYNSKGACPNCGGKGYIKTELAFMGDFSQTCEVCHGKRYKQEVLDATIDGYSIADVLNLTVDEGIIFFDKKNDIKSKLQSVSKTGLNYMSLGQPLSTLSGGEIQRVKLGQHLDEEIKNSIFIFDEPTTGLHESDIPILMECFDDLIDQNNTVILIEHNLSIMCEADWIIDVGPGPGLDGGKVQFSGTPKNFIDSSETLTSKHLKRYIKQ
1679193..1679589                   transcriptional regulator; AL514_08730                                               N/A                 StaphylococcusepidermidisIFNQLFSHPRFFQYKNVEHHNKKFYTSKDLALSVIGKWKTPIIYQLLQTEVLRLSVFEKLLPEINRMLIRQLRELEHDEIIERIVNSVVPQKLSISKRTENTRSSLCNLLGGISGKNFIKCNLA
complement(1679656..1680214)       glutathione-dependent formaldehyde dehydrogenase; AL514_08735                        N/A                 StaphylococcusepidermidisAQRFAKLKSARRVIAIDHVEHRLAHTEKYNGAEVYNFLKEDDVGKLLHETTRGGADVVIDCVGIDEQVVQDDLEVSSNSIQRGNISPIVTATESVRKYGTIQLIGVYGTAADNSQLDLIFNRNVQVKSGQAPVIHMMPKLYDMIKIKSLIQQKLSLILCLKMKKLYLSEKRCSHFKTTIA
1680490..1680705                   recombinase; AL514_08740                                                             N/A                 StaphylococcusepidermidisMRKGDRFVVESIDRLGRNYDEVIHTVNYLKDKEVQLMITSLPRMDEVIGKPLLYIESHALCVWFRKGFTVI
1680779..1681150                   PHAGE_Helico_phiHP33_NC_016568: transposase; AL514_08745; phage(gi371671361)         6.41e-07            StaphylococcusepidermidisMSSDTNSLAHTKWNCKYHIVFAPKYRRQVIYGKIKRDIGVILRQLCERKGVEIIEAEACKYPVGVVEDQIYYFNEDNIDNVIFEGYSDQDETRFQELFKEMMGNLDEDIKRGTVQQKDSYGLI

#### region 3 ####
complement(2103504..2104595)       PHAGE_Bacill_G_NC_023719: gp245; AL514_10745; phage(gi593777701)                     4.50e-34            StaphylococcusepidermidisMIQIKDLNKVYDNGSYAVKDFNLDIEDNEFVVFVGPSGCGKSTTLRMIAGLEDVSKGTISINDKVINDLQPKDRKIAMVFQNYALYPHMTVYKNLAFGLKMRGIKKKIYDEKIQHAAQILEIENLLDRKPKALSGGQRQRVALGRAIVREAQIFLMDEPLSNLDAKLRSNMRSEIIKIHKQMKATTIYVTHDQTEAMTMASRIVILKQGEIQQIGTPEEIYRHPVNEFVATFIGSPSMNMVPMTYNMDAWYFDGQKVADATLLQLASHAQYRLGIRPEDLHLVNDNEISNYPIQLSQFTVDLVELTGSYKLLHCHHNEHKIIAAVDSNLDFELGQTVSFGIKTEDAHFFDSDSGERVQEEVLS
complement(2104946..2105560)       phosphatase PAP2 family protein; AL514_10750                                         N/A                 StaphylococcusepidermidisMNRWKRISLLIVFTLIFGIIAFFHESRLGKWIDNEVYEFIYSSESFITTSIMLGVTKIGEVWAMVALSLLLVAYLMLKRFKIETLFFVIVMSLSSTLNPLLKNIFDRERPTLLRLIDISGFSFPSGHAMGSTSFFGSAIYVINRHDSGISKGVLIGLCALFILLISTSRVYLGVHYPTDIIAGIIGGVFCIVLSTLILKKQLAV
complement(2105573..2106646)       undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; AL514_10755     N/A                 StaphylococcusepidermidisMTKIAYTGGGTVGHVSVNLSLIPTSIEKGHEAFYIGSKHGIEREMIESQLPDIQYYPISSGKLRRYLSFENAKDVFKVLKGILDARKILKKQKPDLLFSKGGFVSVPVVIAARSLKIPTIIHESDLTPGLANKISLKFAKKIYTTFEDTLTYLPKDKADFVGATVREDLKQGNKERGYQLTDFDKNKKVLLVMGGSLGSKKLNNIIRQNIEALLHDYQIIHLTGKGLVDDSINKKGYVQFEFVKDDLTDLLAITDTVVSRAGSNAIYEFLSLRIPMLLIPLGLDQSRGDQIDNAKNFESKGYGRHIPEDQLTEVNLLQELNDIELHRESIIKQMETYQESYTKEDLFDKIIHDALNK
complement(2106664..2107167)       N-acetyltransferase; AL514_10760                                                     N/A                 StaphylococcusepidermidisMIRLATKNDLLSITQLVKEAKQIMEEFNNNQWDDEYPAKEHFEEDIENKTLYVLDVDHTIYGFIVIDQNQSEWYDDIDWPVNRNGAYVIHRLAGSKQYKGAATELFQFAIDLANEHDIHVILTDTFALNKPAQGLFEKFGFTKVDEIEIDYHPFDRGAPFYAYYKNI
2107203..2107319                   hypothetical protein; AL514_10765                                                    N/A                 StaphylococcusepidermidisMVTINLNHIDTFKTQSINENLKKLRNDWDYTLIGITFY
complement(2107503..2108978)       PROPHAGE_Escher_MG1655: carboxy-terminal protease for penicillin-binding protein 3; AL514_10770; phage(gi16129784)     4.49e-37            StaphylococcusepidermidisMNDHQKNHATSQDDNTKSTPSKNSKHIKIKLWHFILVILGIILLTSIITVVSTILISHQKSGLNKEQRANLKKIEYVYQTLNKDYYKKQSSDKLTQSAIDGMVKELKDPYSEYMTAEETKQFNEGVSGDFVGIGAEMQKKNEQISVTSPMKDSPAEKAGIQPKDIVTQVNHHSVVGKPLDQVVKMVRGKKGTYVTLTIKRGSQEKDIKIKRDTIHVKSVEYEKKGNVGVLTINKFQSNTSGELKSAIIKAHKQGIRHIILDLRNNPGGLLDEAVKMANIFIDKGNTVVQLEKGKDKEELKTSNQALKQAKDMKVSILVNEGSASASEVFTGAMKDYHKAKVYGSKTFGKGIVQTTREFSDGSLIKYTEMKWLTPDGHYIHGKGIRPDVSISTPKYQSLNVIPDNKTYHQGEKDKNVKTMKIGLKALGYPIDNETNIFDEQLESAIKTFQQDNNLKVNGNFDKKTNDKFTEKLVEKANKKDTVLNDLLNKLK
complement(2109323..2109547)       YozE family protein; AL514_10775                                                     N/A                 StaphylococcusepidermidisMVKNYSFYQFIMTVRGRKDDKGVFAEQIFEDLAFPKHEDDFNTLSEYIETHSEFTLPMSVFDDLYDDYTEWLKF
complement(2109547..2110047)       glucose-specific phosphotransferase enzyme IIA component; AL514_10780                N/A                 StaphylococcusepidermidisMFKKLFGKAKEVDKNIKIYAPLTGEYVKIEDIPDPVFAQKMMGEGFGINPTEGEVVSPIEGKVDNVFPTKHAVGLKAENGLELLVHIGLDTVQLDGKGFEVLVESGDDIKIGDPLIRFDLEYINNNAKSIISPIIITNSDQTESIHIEDVQAVVKGETQVIDVTVS
complement(2110060..2110488)       PHAGE_Temper_phiNIH1.1_NC_003157: putative methionine sulfoxide reductase; AL514_10785; phage(gi16271776)     8.29e-51            StaphylococcusepidermidisMIKKNKEELNDMEYLVTQENGTEPPFQNEYWNHFEKGIYVDKLSGKPLFTSEDKFESNCGWPSFSKALNDDEIVELVDKSFGMIRTEVRSEKANSHLGHVFNDGPKEKGGLRYCINSAAIQFIPYDKLEELGYGDLIKHFKK
complement(2110485..2111009)       PHAGE_Temper_phiNIH1.1_NC_003157: putative methionine sulfoxide reductase; AL514_10790; phage(gi16271776)     2.43e-23            StaphylococcusepidermidisMAYATLAGGCFWCMVKPFTSYPGIKSVVSGYSGGHVENPTYEQVCTNQTGHVEAVQIEYDPNITTFENILDVYFKTFDPTDDGGQFFDRGESYQPVIFYHDENQLKAAELKKQQIDEEGIFKKPVITPIKPYKNFYPAEEYHQDYYKKNPTHYEQYQRGSGRKAFIESHWGGSK
complement(2111112..2111960)       PHAGE_Staphy_SPbeta_like_NC_029119: DegV domain-containing protein; AL514_10795; phage(gi985761237)     4.10e-85            StaphylococcusepidermidisMAKQIIVTDSTSDLSHEYLKQHNIHVIPLSLTIDGKSYTDQVDISSSEYIDHIENDADVKTSQPPIGRFIETYEQLAQDDVEIISIHLSSGLSGTYNTAVQASHMVDGNITVIDSKSISFGLGYQIKQIVELISQGTSTEEIVKEMTQLRDNLQLFVVIGQLNQLIKGGRISKTKGLIGNIMKIKPIGTLRDGKLELVHNSRTQNSSVQYLKKEITDFVKDHKIKSIGIAHANVKDFVDKIIKSFTESFDFSQFDINVTTPVISTHTGQGAIGLVVLRDTLN
complement(2111970..2112455)       PHAGE_Staphy_SPbeta_like_NC_029119: dihydrofolate reductase type 1; AL514_10800; phage(gi985761244)     6.27e-116           StaphylococcusepidermidisMTLSIIVAHDKQRVIGYQNQLPWHLPNDLKHVKQLTTGNTLVMGRKTFNSIGKPLPNRRNVVLTNQASFHHEGVDVINSLDEIKELSGHVFIFGGQTLFEAMIDQVDDMYITVIDGKFQGDTFFPPYTFENWEVESSVEGQLDEKNTIPHTFLHLVRRKGK
complement(2112497..2113453)       PHAGE_Staphy_SPbeta_like_NC_029119: thymidylate synthase; AL514_10805; phage(gi985761245)     0.0                 StaphylococcusepidermidisMYNPFDEAYHGLCEEILEIGNRRDDRTHTGTISKFGHQLRFDLTKGFPLLTTKKVSFKLVATELLWFIKGDTNIQYLLKYNNNIWNEWAFENYVQSDDYHGPDMTDFGHRSQQDPEFNEQYKEEMKKFKERILNDDAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKSVIQQIKTNPNSRRHIVSAWNPTEIDSMALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLTHLVAKECGLEVGEFIHTFGDAHIYSNHMDAIHTQLSRDSYLPPQLKINTDKSIFDINYEDLELINYESHPAIKAPIAV
complement(2113767..2114429)       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; AL514_10810; phage(gi371496158)      1.82e-38            StaphylococcusepidermidisMLEFKQVSKSFRDGNQMIQAVKPTDLKIIQGELIAIVGPSGSGKSTFLTMAGALQRPTSGNIYINNKNISILSEKQLSQIRINEIGFILQSTNLVPFLTIEQQFKLLGKYKKDTLSEDEYQKLVKQLNLSDITNQLPNQISGGQKQRVAIAKAIYTNPSIILADEPTASLDTNNAMAVMKILQKQTKERNKTCVIVTHDERLTHFCDKTYFMEDGVLSLQ
complement(2114445..2114973)       hypothetical protein; AL514_10815                                                    N/A                 StaphylococcusepidermidisMFLAWNEIKRNKIKFSLVIGILVLISYLLFLLSGLANGLIKMNTEGIEKWNADAIILKKEANQTVEQSLFNISKVQNTYEKSTTLKQRCTSTRLYQLLFSKNGFCSNFHIIFNWNNHRISLNTINRYIFTACRSNSFFINDVDIWNCSYHYFFIRQSIFCVVYNKNKSTSNWIG
complement(2115185..2115622)       BrxA/BrxB family bacilliredoxin; AL514_10820                                         N/A                 StaphylococcusepidermidisMNGYEAYMKELAQQMRAELTDNGFTSLETSDDVNQYMQNIDNDDTTFVVINSTCGCAAGLARPAAVAVAEQNEVKPDHKVTVFAGQDKEATQTMRDYIQQVPSSPSYALFKGQHLVHFIPREHIEGRDINDIAMDLKDAFDDNCQ
complement(2115674..2115934)       scaffolding protein; AL514_10825                                                     N/A                 StaphylococcusepidermidisMEIIAISETPNHNTMKVSLSEPRQDNSSTTYTAAQEGQPEFINRLFEIEGVKSIFYVLDFISIDKEDNANWNELLPQIENTFAKSN
complement(2115946..2116140)       zinc-finger domain-containing protein; AL514_10830                                   N/A                 StaphylococcusepidermidisMKAILTNTEQQAIQHIDQLMNIYCHQCPLKKHNRKTHGKTQAHHFCINECTVGKQIKQIGNELQ
2116391..2117095                   PHAGE_Halovi_HCTV_1_NC_021330: hypothetical protein; AL514_10835; phage(gi509140748)     6.53e-12            StaphylococcusepidermidisMYNEIFGIASFIVTFALMVLMYRCFGKQGLIAWVAIGTIIANIQVIKAVHIFGITATLGNVMFASIYLATDILNDIYGRKVAKRAVWLGFSSTLVMIIVMQMSLHFIPAPVDNAQNSLKMIFDLVPRIAIGSIIAYIIGQHIDVFIFSMIKKIFSSDKTFFIRAYGSTILSSIIDTGLFVSIAFIGTMPGTAVFEIFITTYLLKLVSTIFNVPFGYIAKSLYRKGKIEQLDNGY
2117420..2117815                   PHAGE_Bacill_G_NC_023719: gp171; AL514_10840; phage(gi593777628)                     2.71e-13            StaphylococcusepidermidisMAKIYFDAATKGNPGRSACAIIIKENSQRYTFTHDLGKMDNHSAEWAAMLHALEHARELKVSNALLYTDSKLIEDSMMQGKVKNAKFKVYFENIEILEQSFDLMFVRWIPRKQNKEANQLAQQTLYKLTSQ
