gi|00000000|ref|CP014201.1|  Lactobacillus rhamnosus strain BFE5264, complete genome. 3068152, gc%: 46.84%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
557..1774                          PHAGE_Lactob_PL_1_NC_022757: major capsid L; AWJ15_00010; phage(gi557308050)         0.0                 LactobacillusrhamnosusMTLDEKLAAVKKQLDEKRSALPAMKTELRSLLEGEDSEENLKKAEGVRAKYDKAGKEIKDLEEKRDLYEAALKGNEQPSDKKKRQPEQQNYRTAMNAYLHSRGRNTEGIDFEKTDVGTFAVLRADPTDASDAVNAGVKSVDAKETIPDTIVNTPQRELQTVVDLKPFTNVFQASTQKGTYPTIANATTKMATVAELEKNPAMAKPDFKPVNWSVDTYRQALPISQESIDDSAIDLVGLIAQNAQQIKVNTTNSALQLCRIHSKEHYSVDDLKHINNVDLDPAYSRVIIASQSFYNFLDTVKDGNGRYLLQDSILTPSGKSVLGMPIVVVSDDTLGAAGEAHAFLGDIKRAILFANRADFMVRWVDDQIYGQFLQAGMRFGVSVADEKAGYFSHTPKSVTPDGVI
1771..2011                         PHAGE_Lactob_PL_1_NC_022757: major capsid L; AWJ15_00015; phage(gi557308050)         7.99e-23            LactobacillusrhamnosusLSQKTFTGGVGATKDITVTVTPDGAPQAVEAVSSDESVATVVKKSDGVLHYYQSGSGNSDNHIHWHQLNACCYCRRVG
2022..2380                         PHAGE_Lactob_Lrm1_NC_011104: DNA packaging protein; AWJ15_00020; phage(gi195661207)     1.28e-42            LactobacillusrhamnosusLADTTLDKSPLTDEQFQVLKMYLKVDQTIEDPMIMQLVHDACGEISSAISFGSKPEQFLSNPETRDRFFTALMKQVKEDYDYRGMGAEVMRFPLQHQPQISSISFAQNCRKRMVILMRTAA
2465..2698                         PHAGE_Lactob_Lrm1_NC_011104: head-tail joining protein; AWJ15_00025; phage(gi195661208)     2.21e-49            LactobacillusrhamnosusMTVWAEVPKVTIREANDPQTKLGTRKDSPTFLVRFLTAEEIQPTWRIQWRGKEYQITGLDPDYERRDLTTITAKVVS
2698..3107                         PHAGE_Lactob_Lrm1_NC_011104: head-tail joining protein; AWJ15_00030; phage(gi195661209)     7.25e-83            LactobacillusrhamnosusMGVKVTGDAELLANLNKLQFGVAKEARAAVRDGAQKFADKLKSNTPEWDGETDMSGHLRDDIKLSSVRETSGLTEVDVGYGKNTGWRAHFPNSGTSIQDPQHFIEETQEVMRPVVIATFVTRKADVMAPEKRVYGA
3082..3468                         PHAGE_Lactob_Lrm1_NC_011104: head-tail joining protein; AWJ15_00035; phage(gi195661210)     1.13e-48            LactobacillusrhamnosusMAPEKRVYDILSADSDIADKVYIGTQTSITRLALLKVLHGESLLFPVMLLIMLTILESSIRKYKIFWVDKTDWDQQEKIETQIYQALHAAGWERYYRNSYVDGDTPALRMTTGYFQFQGLPIG
3502..4124                         phage tail protein; AWJ15_00040                                                      N/A                 LactobacillusrhamnosusMADTAVTTNKKLAKFGLRPSNTGLSVMTILYQAHERFKAYLVNWILKQSKRRCPLMMARTFFLVVSQKQPKQSKCTMWIHRSLIYLALRLLMGLKYIQRTLALITPQLCSVQSSQMVNTFGLVCSRECSHFRALIPRLLTAHQIRVLTASKAHSFLVVTKTLAMLCLVVKTTMDSILIPSTAMYSLRPLKMRLLPKSVVGVSFGA
4165..4350                         PHAGE_Acinet_Presley_NC_023581: decoration protein; AWJ15_00045; phage(gi589891376)     3.40e-14            LactobacillusrhamnosusMKVQINPADAANKQVTFKTSDSSIATVSSDGTVTGVKVGSATVTVTTDDGGKTATATVTVA
4420..4833                         PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; AWJ15_00050; phage(gi195661212)     1.11e-94            LactobacillusrhamnosusMAYQIKLNIKGETCVFTRNGEPTLRDTTNALKVQQQQLRMLNRKDGPSNDDYDENEKNLAKFAVDFWKNQFTIDDVIDGSSISLKSLDSINDAIGDSLSDGEEDKKDTAKKSPKRTSKKPLATLTTSTKQGSLKATD
4956..8153                         PHAGE_Lactob_Lrm1_NC_011104: tape measure protein; AWJ15_00055; phage(gi195661213)     0.0                 LactobacillusrhamnosusMLGNLGQIAATVSLNIDPFQVSQRVLNSSIKATAAELRAQDAAFKGSEKSINNMRSTYDTLSRQSKNYQAQLQKQRERYDENSKAVERLNKSETASQEEINRATKLQANAASQYNRTAAAAAQNENRMAALRKEIALQSDGWTKVSNGASKFASVTEKTSSKLTSFGSTMTRAVTAPIAIGFVAAAKSAIDFNSQIQAMGPLLTNGGAITAKYRAQLDQLASASKKWSVEYGVSTAAINDGMSEMIKRGYTAAQTLGAMPAVLNAAKASGDDFNDVMHVSTSVLEQFGLKTESTTGMLKNTSRVTDTLTYVANATAAGFQDMGEAMTYVGPSAHAAGISLEETAAAIGIMSNKGIEGSVAGTALRGALTRLLKPSKQNIQGFNELGISVADFKKGTLTLPEILDKIKNNTKGWTDQQRASAVALAFGTEAQAGMNALISAGGGELRKYTSEAEHASGTTAKIANQLNNTDAAKLKRFQESIHVLGIEVGQKLLPTLTPLIKTATDVVNAFSKMDSGTQQTIIKFAAFAAVVGPVSSLIGGALKPVVALSKGISGIAGVIGRASAAAKIGGTAMDVLKSGFSKTAFEALKVAPAAAAAADGASGMGAAMGGAAASGTGLLAALGPIVPVVLGVTAVVGAGVAIWELWGKKALESADRTSRWGTDIGAAADRSATKMRDASGKISGAFTDTNHTVKENAKTIANGFDNITKAAKESSKNTQTALDKLAKQVGGSTADQIRKDAAETKKADDARIKQIEANAKQAKSITESASKEHTEFTRDQIQILDNLRKSSAAEAVKTLRISGTQQANVLKAINGEKIRMSQAAAKEQYSQMQQAFADETDTYGKHYAAIKNSAELSTAKKNKDLEKLEKDHQSNMSVIYAGAIQAMKAQGLSNKTIQEQLQTEFGATASQAKKAMSAYSEAMSKGVKDSKQFAAAVNSNMSKSVQKAGNDWNNLVLDPKTGKVVTNLPQVLKDTASTEDGWKRLKFDLKNAKISSNAKQMIVEAMASTDKWNSLTVQEKTALVRASGQKDLANIITEFVSWNKFTPKEQQAIVSGDYTPLNFQVK
complement(8194..9210)             PHAGE_Staphy_phiPV83_NC_002486: transposase; AWJ15_00060; phage(gi9635740)           3.70e-44            LactobacillusrhamnosusMTHSQTNTHKHYQQLSFSDRATIQALQAAGDTATVIAQKLHRSKATISREITRGSVTQLDSKRHSHQVYLAETAQAMHDRKRDRTGHYAFLKTGRAFFKALARELTRKPRVHSVDSFVHFYRDQGKACPSTTTVYRYIDAGLLDLDNMTLPKKLRRRIKGYKNAHKRKNKKIYGDSIELRPAAVNDRTGVGHWEGDLVKGIRLADEPALMTLTERYSRTEIIVKIPDYHADTCLKALQDTIDDYGAKEFESITFDNGSEFAKLSEIVGTQIYFAHPYSPWERGTNENANGLLREFFPKGKSLRAVTLVEIQAVQSALNHRPRRILNYLRPCDYYRCMA
9258..11009                        PHAGE_Lactob_Lrm1_NC_011104: tape measure protein; AWJ15_00065; phage(gi195661213)     0.0                 LactobacillusrhamnosusSWPFWSSRQGVALELTGGDYTPLVNALVQMGYWNELSLKEQQAIVHDKATLPLIDILTQSGKWQGLTLKQQTALINAKGKDELKDVLFNLGVWQSIDPKDQYTTLKAVGEGKLADMLDQLDLWNKITPQQMQAVVKGDYSSLVTAIDEVNGWNQLTPKQMQMIVQDKATATLIQGMIEAQSWNRLSVEAKTALIQAKGKEQLADAVTKFGLWNQLPSKTKELLVNNADARAKLVEAGIDVDAYEAKHPRPKELTANVNDLLTKTSQAKGDLISYDSYKPGMKQFTGDSSNVTQHAEHGKSEVNTFNMTNPLARYFTGDSSNVTAHAEKGKGEVNSFNGTNPSMRYFMGNASSVVGAAGSGKNSIGSFNGTNPGDKYFKGHDHTTGPASAAKRAVSAFGGNEVITKTFNFVANISDSIRRLLHLQHGTNDLRTSSLAMVNDAPGSNYQEPIITPNGSMFMFKERNVVFPLARHSMVIPADKARRMNIPRFAGGTTDFGGAANRINQLNPQTFVTSISSGSNSRVEDLLARLIELTTYQISNPSVPEGKVVLDNGREVGRWLYPTINKLKNRDTIISNRRRGIF
11010..12917                       PHAGE_Lactob_Lrm1_NC_011104: tail component; AWJ15_00070; phage(gi195661214)         0.0                 LactobacillusrhamnosusMANLIFGGHKIGSSSLQFSAARGIFSEVENTTQPVGTSDGEMLVRSHLKPRIIPVTYDFVALSRREFERQLAPLLYSTDVQKLIIDDRPDEFWYAKVDGKIDMDRAYFLGTGTINFLVPDGIAHSVATKTFDNMPYKDVPVNLLTGTSYMATAESVPKGAFKASNAKTVSVSSGETYTYSIEIPSNNTVDLEAAINLNSKGVFVRFVIGNVIKAGESGISTITLTVPDGIDSLFLAVSLTTVNPNSATTIYEAGEKLELGTTASPWSPNPADAAYYNNELTIDNQGTYKTAPVITATMHGDNGVIALVNDQGAVLQFGSPSEIDGVVRQKSERVYHYDFESEPTGITMNAGALTYPNYRDNPSTPNKQKGIFSYGRPDGYDNAIAYPNTERNPSNYWSGPSMSGKLAANSNGKQNGNFEWRNLIRFATMTNWAGRVEFNLTYEGKIVASLALYDQSTTDDQVMFEGKIHDGNDARMLFHEALPRDLYSRANSFAVISKMGDQLTFRIDRVGGGNVIRPFTIAGFGALPVDGWTVWFSAFSDVLEANMGWQDSYFDWVNVDYWTDVPNRFKEGDVVKIDVAKRVVSLNGAEDPTLQTVGNNWEGFQLLPGKNTIQVLQSDWAKPYTCQVEWQEAWL
12917..15856                       PHAGE_Lactob_Lrm1_NC_011104: host specificity protein; AWJ15_00075; phage(gi195661215)     0.0                 LactobacillusrhamnosusMDFYFTDRSWHLLGIATAGEGPIHIVNDTDDQLISAGARTYTGTVLFTPETSDKVKRMLTYGNYVLYKDTRGKAVFMTIMESNHDPLLGEATFTAEDAGIDLINETVGPYKAGKPMSIAEYINFFVTDSGFDIGLNEIPDLKRTLEWTGESDTALARILSVATQFDHAELEFSFQLNGTSVVQRLINIHKRIGADKRITLYVDKDINKIVTSGNIWDLYTAITPTGGTPEAKDGDTSEQKPITLAGYQWTDPDGRFVLTSDGVLLDPVANQQWSRLLSGGARPDAAGAYINRVNTYEATTQASLLQSALSDLKKHNHPVVNYETDIARLPDNVDIGDTVHLADENERLYLSARLLELKSSYSMDTHTATLGDYLIETDQVAAQYRELAEKIKNIPKTVQYWPWLRYADDDKGTNMSALPAGKKYMAIVWSNETSVPSDNPADYAGHWALIQGKDGADGVPGAKGADGRTSYFHTAWANDVSGQSGFTVSGGDGKKYIGTYSDFTQADSTNPSDYNWALFKGEDGDVGPKGDQGLPGKPGADGRTAYAHFAYANSQDGQTDFSTTAPNRKYIGFYSDFTSGDSTNPSDYNWSLIKGADGADGKDGVPGEPGADGKTPYFHIAYADSSDGKTNFSLDTPGSRKYIGSYTDFTQADSTNPAVYSWQLVQGPKGDTGPQGPQGPQGPQGPQGIPGSKDVPYTYIQLGTPASPKKGDLWWHGTTLNDATALQYYNGSTWIDQSIQQAVLSIKKLQSIEIDSATINSPDINVPFKHVSIEGSGIKTSGSLTLNGSSYVITGTVEDPNGNGNGQLYRTSLNPDGLYSYITEPDGVTKMHSNRVSMGTLELSDHTSGNGNNAKYITSSFTALDAVTFYANEGSYSNPDVAEGTIDYARTGNLVTVTFSVHAQGSTGYKLLANIRPGYSPYYKDRFGYSMRGTSYHSNCDVYIQAGGWYLIPMDSRDWYRGTVSYITRDNYPTGDAHF
15853..16140                       PHAGE_Lactob_Lc_Nu_NC_007501: hypothetical protein; AWJ15_00080; phage(gi77999996)     4.29e-18            LactobacillusrhamnosusMKIKVWLKDDRLLHWAYMADDAKIGATEDGQQIIEADDVSQFFDGHASLVDGRIVADEGYDPANDHPLPGPSPEQQMIAALYARVAKLEDGDGNE
16294..16584                       PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; AWJ15_00085; phage(gi195661217)     4.49e-60            LactobacillusrhamnosusMTFLGYTIGDWAEVISIIGVGVSAGSWLFKKIALDPLRSDIQMLSETINRQLKLHEQSLADLNTHLKAHDEELGSHSVRITRLEDHVGIKGDNDDE
16577..17023                       PHAGE_Lactob_Lrm1_NC_011104: holin; AWJ15_00090; phage(gi195661218)                  2.44e-96            LactobacillusrhamnosusMNNWTELLVSLAVAAVPIIGAWISKQLLANKQALTLVKVLGPLANAAVTAAEQLGVTDKLSGELKKSAAIEAVKNSLKSLGFTKADEQTIANAVEQSYANLKDSLAETYPQKTVDQEASNQDKVAAAAQAAADAVKAQLAPSSVAPQQ
17034..18332                       PHAGE_Lactob_Lrm1_NC_011104: lysin; AWJ15_00095; phage(gi195661219)                  0.0                 LactobacillusrhamnosusMKFKTKLITLVVAFLAAISFPLPTQVNAAKGDQGVDWSRWQGANGVFGYSTDKFGISQIGGYSGYGTYEQTTYKTQVASLIAAGKRAHTYIWWQNIDNTNLAKQVLDHFLPEVQTPKGSIVALDYEAGSTNTATLLWALDYIRDAGYTPMLYGYKSFLMSHIDLSQIASRYQLWLAEYPDYNVTTVPNYGYFPSFDNVGIFQFTSTYRAGGLDGNVDLTGITDSGYNGSTTTDSGKTYVNPSNNTPATSAGQQANNTTLSQIKVGDSVKVNFGTTRWANGVSMPSWVQGKTYTVQQVSGSNVLLGGIMSWISRSNVELLTTTSVPSVNSGSTYTVQYGDSWWSIAYKYGMSMYTLASNNGKSIYSVIHPGDVLRVSGGSSVAVASHTYYTVQSGDSFWSIASKYGISMYTLAANNGKSIYSVIHPGESLYIR
18492..19175                       PHAGE_Staphy_SPbeta_like_NC_029119: Fic/DOC family protein; AWJ15_00100; phage(gi985761206)     4.75e-05            LactobacillusrhamnosusMNTKAVKVAGLSNDTILDISMALINDMGLNKTDNKYLIKLHKDSDQILLDLLSDGNTLKTLSLAIASGPLILNTEAMKVINAQAEKMFREDTIYGIKDSTGADRIIGSIQNSYDGNDFFPGVIKKATAYWFKFATSQMFFNGNKRTALMSGLYFLAVNGFSWPNINGNELYSITVAVANKDISQSELESYIRGKTGLQYFSTPKQALDNSTATLKFHFTIDNPNINP

#### region 2 ####
274516..274558                     attL                                                                                 N/A                 TTTGAAATAAGGTAAATAAAGAGCTCCAGAATCATGTTGGAAA
complement(274624..275808)         PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; AWJ15_01260; phage(gi100026)      0.0                 LactobacillusrhamnosusMASISSYKLKDGKKAWEFYIFAGVDPQTGKEIKIHRRGFPTEKIAQQEATLAEAEIIKGHSHYQTERILMADYLNQWITKLKVNVKEGSMIIYRYNLKKYIIPKIGDIRLAKYTLKEHQEFISSLFNDGLSLNTVKLINGTLHNALKKAVAIGYITKNPTVGVEFSAYAKDNSKKLHFWTKDQVGSFIEAAEEDKEPMWLSFFVTLIDCGLRVGEAMALRWSDIDFNKNTLSVNATRIYRAETGSNAGKIALDRPKTLSSKRTEYMTARVNDLLQQQYERHFSHGNVQGFRFSTSHNNDFVFTYSSDAKFGQPLRSRATTGAFNRITNRAGLPHIRIHDLRHTHAVLMREAGLSLDDIKDDLGHKDISTTQIYAEISPAKKKENHQQFEKYLNQ
complement(275919..276599)         hypothetical protein; AWJ15_01265                                                    N/A                 LactobacillusrhamnosusMSKEKQADSKNTNHQIELVDSSESSSEATAKSTFCSPSDEDFFKNLSNDLHSSFDQSGTSPSEIAIPEFPSVNKSDALLISSDKGVSKHYIIEGKGSSSNFRASITRGNHMDSKYSTKEEIKTLEAKINGQIETHAADVEGKVNTINATMNSKIELLNATINGQFDKLNTSIGDLKESIPDKVSVRISKEFNDRDKRQRDTIHYIIGTLFIGGASLIVGIISMFIH
complement(276615..277013)         hypothetical protein; AWJ15_01270                                                    N/A                 LactobacillusrhamnosusMIGNMITNLGSRPSGVGTVEVQPANNFVVAGSPTNYSFSALVVFSLEESDKKEESYNIIFSLKKKETGSDKELATLKIPAKNVSTDPGKSSVLTVTFTNVLIENIGVFDLVMSINGKQVCDAELQFTTKSQN
complement(277056..277259)         PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; AWJ15_01275; phage(gi100029)      1.33e-36            LactobacillusrhamnosusMNGPDTLSEARFIGLIIVLIGVYFALFGNRPRWLHWLIDPDKTGSNLWWAAVFIIIGALMMMVRKMQ
complement(277283..277708)         PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; AWJ15_01280; phage(gi100030)      2.04e-98            LactobacillusrhamnosusMANSTIRQADILLRECTVMQVATLDTDTGFPNIVSLTPLKSHRSLKEILFYTDRDTTTIHNVLENPVVAVYCFNELHHSSLLLRAKAVVLTAEEALPSFTESLNSFQKSLQYDRPVIIRCNPLTVKIRYNNDIEFSKLNEI
complement(277912..278598)         hypothetical protein; AWJ15_01285                                                    N/A                 LactobacillusrhamnosusMSAKEDSLNFNEYGELVLEGIIASIPSVGAALQTAYFGRKNEKRFKRIESFYNELSKDINKLHAQMATSEQIDSISNELSDFMEATNDIIESQSSLAKQSMLHNAFLNILNSPQSVNWSENRFFMSTVRQIDEIDLKIMSAIKDIPANRWATPSNVELFASIDHFFAIGLLERLTNFGYLEKRLGSITMNDTKGTTIDTYYRITNLGKRFLDFMMQPPLSANTQNGDN
complement(278672..279037)         hypothetical protein; AWJ15_01290                                                    N/A                 LactobacillusrhamnosusMKTTKLVVGILQIVLSLFILLQSCAVGVGNAIDKSKDVGGSAGFVVAILFIASGIIYIVTRKSEKLGGDIAGLVLMIISWLFAISNAHVYSDLQIWGWVSFIIGVGFFVWHFIALRKQANK
complement(279093..279662)         PHAGE_Lactob_PLE3_NC_031125: membrane-associated initiation of head vertex; AWJ15_01295; phage(gi100034)     2.21e-62            LactobacillusrhamnosusMEHETRRSHRDIKKPFWKRWKFWTVFVVIVLLVVGISSCVNEFKKESASPSTKIYKLNSDRSVKAMLKHYNPEIKYESISGVYTNSDGSKTVGLNIKESGSDLSNKMAMRNAGNDVLKTWDAFKKSKGTNFANIAIMVTYPSNNGQIPIIKVQITGNKLKSFNKSSSSSSNVPYIATKYWQRNDMPALK
complement(279678..280361)         PHAGE_Staphy_2638A_NC_007051: ORF016; AWJ15_01300; phage(gi66395466)                 4.89e-18            LactobacillusrhamnosusMSELGDYLRQLRGTMSLREASQRSHGRISHAAIAQAEKGINSHGKPFTPSAETLKEFAKLYNVSTTKLMKMAGYIQKSSDLPSNAIPVSSEESDQPVMVYGEIQAGVAKWAEQDIIGQINVTKSFAKRYGAKNLFALQVNGESMNREIPNGYIAVFSKDLEPESGDIVAVMIDSESATIKRYRETSLAVLFEPSSWDPSFKPYVFPKDGIQDFKIIGKFLYATSECI
280491..280736                     PHAGE_Lactoc_50101_NC_031040: hypothetical protein; AWJ15_01305; phage(gi100003)     5.15e-06            LactobacillusrhamnosusMSNNLRHYRREKEMSQLELAKQVGVTRLTISNIETGKTKDPATSITLRISEILGHSVDAIFGSENVNLDKHSPAQREEVAR
complement(280781..281260)         PHAGE_Staphy_StB12_NC_020490: hypothetical protein; AWJ15_01310; phage(gi939535487)     1.16e-07            LactobacillusrhamnosusMRITFTLDTLIGLIALVVAIWSLAYTYCQNRSQLDLTYQSVDHDEDQPYYFVILKNTGSKTITITDFAFYKESERLNDSGYQPDTLISDSLGIAALSRLDVQESLVFDHSEILAPGEEVKFGYYLTVAPTHIFIRTNKRITGWKHSKLILADFYEEQHS
281290..281703                     PHAGE_Lactob_PLE3_NC_031125: clamp-loader subunit; AWJ15_01315; phage(gi100041)      6.92e-77            LactobacillusrhamnosusSHLKEKQSIEISTAKGGSQMNEEVKIPELFSGDGIYHDLRGLLFTDKREEDEEKASFIEHDIEGLANDPNFTRDDAKNLKAYAFEKMDSTVADLTELNAICEMLGISIMDLFSERLPHYQELHYMRKDEQAWNKDLH
281682..281912                     PHAGE_Lactob_PLE3_NC_031125: sliding clamp DNA polymerase; AWJ15_01320; phage(gi100042)     4.83e-47            LactobacillusrhamnosusMEQGFTLIDPTKPQRTRKPFKPKVYWTPKDVMAHYQVSAATVSRWKKKGAPFVGPGKTQRVEPEKMERWFARQQGV
282056..282273                     hypothetical protein; AWJ15_01325                                                    N/A                 LactobacillusrhamnosusMRDTKEYWQDIHDQVENVIYKGHGDRGWLWMFELSQRMLNKCAQKIPRQLREVNNIADIIMSQVYHERRQSGA
282457..283332                     PHAGE_Strept_EJ_1_NC_005294: hypothetical protein; AWJ15_01330; phage(gi39653695)     3.52e-76            LactobacillusrhamnosusMANEIVASVNNRITEMQKNEGLKLPANYSPSNALNSAWLTLSDNSKGPSLLDKTSPQSQAKALLNMVIQGLSPAKNQVYFIPYGKDLTLMRSYFGSLAILKRLDNVQDVWAEVVREGDKFQIGSDRGRTVVKVFEPRIENQDNAIAAAFAVIVDNNGVENFTIMTKKQIDQSWSHAKTKKVQQEFPEEMAKRTVLNRAAKFFINSSSDNDLLLGAVNETTADEYDNAEPKDVTPNFDDLIDSKPKEESKHAANTKEAKEAKPKETSQADRAEHRPVTDKEVANLFQNQVNK
283352..284116                     PHAGE_Lactob_PLE3_NC_031125: late promoter transcription; AWJ15_01335; phage(gi100046)     3.94e-84            LactobacillusrhamnosusMDWQYQSPTWFKKFMACEAEALAELKYEWKPKRDPTALLVGNYLHSYFQSRYAHNKFKQEHPEIISTRGATKGQLKREYQVADNMIRTLRTDPKFKEFYQGKKEVIVKGEIGGVAWKGKLDCLADNHKYFADLKTTMDINKRFYLPEEHRYGSFIEAYNYPLQMAVYQELIRQQYGVQAVPVIIAVSKQDPPDKAAVSMPQDLLDYWLERVKELQPRIEAVKNGEEEPKRCEHCEYCRATKHLTQIISLYDLVE
284132..285088                     PHAGE_Lactob_PLE3_NC_031125: dsDNA binding protein; AWJ15_01340; phage(gi100047)     0.0                 LactobacillusrhamnosusMDLFKLIREFYIQQSVNPLSTGQIALWHGLVYQCNQLGWPSEFNMPNRTLETLTGLSRQGIVKARNALKQSGLIDFQTNGVKATTYSVIDISRKLSTSDSRQPSSQADDGVSNSRQHSRQPSRQHSLQGSLQPSRQHSSTYTKQDETKLDKTKRQQTTAPVKAAERPAEESSSSSSSILDICNFWEGNGFGQLSPFTRESLVDWVADMRKAGSPEPEKLVLNALRTAVESNVRNYKYVNGILKNWESKRLLTVAAVEANDSERKTNQPQRRYGKPVRTEKLPNWAEPGYKPEHKKVSAEDRAELAEQLQKLRALGKKN
285101..285586                     PHAGE_Lactob_PL_1_NC_022757: single-stranded DNA binding protein; AWJ15_01345; phage(gi557308026)     9.03e-102           LactobacillusrhamnosusMLNSVSLTGRLTRDVDLRYTQSGTAVGSFTLAVDRKFKSKNGERETDFVNCQIWRKSAENFANFTKKGSLVGVEGHIQTRTYDNAQGQKVFVTEVIVDNFALLESRQASQNSPKSQQTANASAAATTNASQTTPNASQANATDPFANNGQPLDISDDDLPF
285894..286109                     PHAGE_Lactob_PLE3_NC_031125: RNA polymerase sigma factor; AWJ15_01350; phage(gi100049)     2.14e-27            LactobacillusrhamnosusMWDSVQKILDGRSISIPELADLAGYNNPSTLYMIRSGGIKDPSFSTMIRIADALGVSLDELRPDKQGVKKA
286106..286555                     PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; AWJ15_01355; phage(gi100050)      1.90e-70            LactobacillusrhamnosusMTQVTVRLYKQGDKVWRDFKAELITRYENAAMLGISESEAFSKIEKQEFNNLIVVSKKAIVEKRAVAGVDDSDTLKTSVTNGIKKISKKRKEARAKYARGIAEAASQCDTLIDVAKRIGKSTTFVRRVASEFDIKLPSRNNGHEEIVSR
286558..286941                     PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; AWJ15_01360; phage(gi195661241)     5.75e-87            LactobacillusrhamnosusMVIRKRRRGKYNAQPVVIDGIRFASKAEGAYYMLIRNKPQKITMQEPFEILSAFKINGKRYSARKYKPDFCFYDGEKLAKVVDVKGGDATLTTDARLRMLLFMIRYKIPVTIARYDYHTGLFTEEQL
286953..287135                     PHAGE_Lactob_Lc_Nu_NC_007501: hypothetical protein; AWJ15_01365; phage(gi78000015)     3.87e-34            LactobacillusrhamnosusMKTGDDTFDDIYISKETGKVVGVMYEDVDYKLVPLKKCDIPLGQLADHINNYVYRKEDEK
287132..287341                     PHAGE_Lactob_LBR48_NC_027990: hypothetical protein; AWJ15_01370; phage(gi937456731)     1.94e-39            LactobacillusrhamnosusMSKNYEEMSQLDRTDKKMKFKIVGRNGETKIKEFRSQYEADSYCERLNYERLERLGLIEHLNIPAIEFE
287413..287724                     hypothetical protein; AWJ15_01375                                                    N/A                 LactobacillusrhamnosusMNKNEAKMKILNMLDKVDISKADFVRMVTTIDTAVDAIEPDKLYRVKVYGIDLPALFYRKREDGTLSFVQGGAGLPETEFTMDEIKQRHLENCEREEVTDDEQ
287714..288079                     PHAGE_Lactob_Lb338_1_NC_012530: hypothetical protein; AWJ15_01380; phage(gi226377665)     1.11e-42            LactobacillusrhamnosusMSNETKRDVFEELAECYAEVSDAYTNEAGIPYYCDDEPNYLDDYDAALPDDLPVIPKAVGDVIVKLKHKKFSLSGAMSYAAVVSLSPWMTFEHEDTFARAWVLGAWKVEETGEIVKLEAEK
288076..288495                     PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; AWJ15_01385; phage(gi195661248)     2.87e-44            LactobacillusrhamnosusMKREIKFRAWNKKDKVMVDVAATNFGPSGCWSLIEDAYDAELQLADSYDLMQYTGLHDKNGREVYEGDILKVTSEDGESYVATVKWFGDEGYPAFDLAGIPAAWCYESNALATIFESDVETCEVIGNTFENPELLEGKQ
288492..288674                     PHAGE_Lactob_CL1_NC_028888: hypothetical protein; AWJ15_01390; phage(gi971752682)     1.30e-23            LactobacillusrhamnosusMKISPYRFMSWLGLILALASSFLPAKYMNFGAYKTFTGLTLIAVLFALWDISDAIREERE
288753..288938                     PHAGE_Lactob_iLp84_NC_028783: hypothetical protein; AWJ15_01395; phage(gi971743115)     6.45e-23            LactobacillusrhamnosusMNDRHRAVMRARKEQIMYERRKYEHKMDEFAKALYPVFKAAAATIEQWLAAFQVQVNKKRA
289133..289561                     transcriptional regulator; AWJ15_01400                                               N/A                 LactobacillusrhamnosusMELLSISDEKDREAVENILNKYRAERGFIKAPVNPKITSAWGDGTSASTVQRPLYAQQRLERQESARKFCEWCDSCIASMPKQSHQRLLRVRYCDGPETDTPDGDAMNILDISAATYTRRKKNALLAAAWYFGVTPRKSSEQ
289935..290007                     tRNA                                                                                 N/A                 GTGAGAGTAGCTAAGCGGAAAAGCGCCCCGTCACCAGGCGGGCAATGCGTGGGTTCGATTCCCACCTCTCACA
290083..291216                     PHAGE_Lactob_Lc_Nu_NC_007501: hypothetical protein; AWJ15_01410; phage(gi78000019)     9.05e-113           LactobacillusrhamnosusMQWTDEQISGIRKLASEGFTRRETADKLGISYDALQGKAKRLGIEFQKPAKNEYDSDGTQSSETILKVVRGQKLTPEDVLRAHGYDPEQWRISNATSNYWKQTPEATLYQSKIRLAPKGGLQPKELSAMLNEDVTPIRVTNIKAGCHNLVIPLFDLHFGITTLEMLSPRLNDLIEIIGRGYKHVVIELGGDLLHSDFMATTQTVKGTQLDHADTVKAWSEAKQFIGAIIQACLQNAAHVSIRAIGGNHDFDMQWAFVDGLSDRYPQVSVYNTIEYRQAFRLDHVGIMMAHGDTALRKLPMLFATEHSDIWANSTWREVHYGHFHHEVVDDDSGVILRQMGTPKPSDNYEKKNGYTMSHKSWKVFEYDESRLRVTYDV
291209..291532                     PHAGE_Lactob_PLE3_NC_031125: dihydrofolate reductase; AWJ15_01415; phage(gi100060)     8.50e-65            LactobacillusrhamnosusMSNRMIRTDYGYVSGIERSIIEKLSREEKHMQAIIYTKPHCQKCRRTILKLSRVMPVQTITADADDYERFRKLGYRSMPVVTIYKADGTHDEWCDLQVDKIKQYTEG
291869..292057                     PHAGE_Lactob_PLE3_NC_031125: protector from prophage-induced early lysis; AWJ15_01420; phage(gi100001)     1.10e-24            LactobacillusrhamnosusVISSNDELNRQQARKSKAEADIMEAKARAYRTPEGQDGGLNKLLAAIDESIPKDGDVNDNSD
292041..293294                     PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; AWJ15_01425; phage(gi100002)      0.0                 LactobacillusrhamnosusMTTPIDQFKGKQLDIINWWRRYPDKQTIIADGAVRSGKTFAMSISYVLWSMIVFDREQFGIAGKTIGSLRRNVIRPLKQTLQQVGFSVVDRRSENMLEISLDGRTNLYYLFGGKDESSQDLIQGITLAGMFFDEAALMPQSFVNQATARVSVTGGKYWFNMNPEGPYHWFKTDWIDQADEKRALRLHFVMTDNPSLSDEVIDRYEHMYSGVFYQRYILGQWVLADGIVYDNFNKDEMVSNPSQQPSRYYVSVDYGTQNPTVFLLWGKCGSVWYCLKEYYYDGRHSSRQKTDDEYARDFSQFVGDIRCEVIVDPSAASFITKLRERRYRVIKADNDVLNGIRETQTAMNSGDIKFTPGLTNLFKEFASYVWDDKASQKGEDKVVKAHDHAMDAMRYFVMQVIKRRNTARTFKNTSKYF
293299..294726                     PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; AWJ15_01430; phage(gi100003)      0.0                 LactobacillusrhamnosusMAIILTVQGKGSIADGDVFIFPVDTPITGDDITNFISANDELARMKYLPAKKMYLGDHKILHEDAKDHGPDNRLVGNLAHYIVDTYNGFYIGIPPKITLDNTQDNTVLQEWNDTNSVQDKLSEISKQASIYGRALAFLYQDEDSKTCIAYSSPINSFLIYDDTVAHKAVAFVMYWHDDNNNLTGKVYMKDGIYGLDMVRFEGTDGFNPFNEVPAVEFFMNTERQGIFENVETLINALDKVLSQKANQNEYFDNAYLVLKGLKLDEDDDGNPKLDLNGNQIIYAPDADSAQGVAEFLTKPDGDAIQEHLIDRLISMIYQISMVANLNDEAFSGNSSGVALQYKLLPMRNLAANQDRKFTQSLRSLYKIAFSVGTILPESKADDWQKLNFAFTRNLPENITDEADAASKLKGLVSDQTMLSTLSFVDDPKAEMKRIADETAQKAKDAAANSPSSPDFQKLLNGGGNDDNNDSTTDSE
294692..295684                     PHAGE_Lactob_PLE3_NC_031125: DNA topoisomerase medium subunit; AWJ15_01435; phage(gi100004)     0.0                 LactobacillusrhamnosusMTTTTQQQIASNSAYWNKRTAAERKWIVGNLKNDAAFNSRIQAYFDKALTDIQKDIDSELAKYAAYSNDSMAGARQAVMATDIKAYQAEAKSIVDDARKMYNGEPLKYSDFSKDVNDRLKLYNATMRINRLEMLKSEIGQEMLDAHMKVNADLISKLSDDYQSEIKRQAGILGETVSKGGYTDLAKLLSKREGDYTFSQRIWINQDILKAELDELLTSATIQGQSPLKIARKLRGQVAETVNNHRYVTERIARTESARIQTQAQLDSFNKFGYDYCKWVAEPSACDACKEISEGGRTGRGIYRVDDVPDIPAHPNCRCSIAAYAPGDEGE
295809..296462                     PHAGE_Lactob_PLE3_NC_031125: DNA topoisomerase II large subunit; AWJ15_01440; phage(gi100005)     9.55e-118           LactobacillusrhamnosusMIPKILMPMNLQFFAEDTGADGSQENQQNGESQSENDTNTQDSKHDQDSSNESSDQHTYTDEQVNEIVKKRLARAEKEKQAAVDEAAKLAKMNADQKKDYELQKAQKERDELKSQLASYQMGKQARSMFEDAKVSVTEDDLKHVVTPEAESTETNVKWLIAHDQAVAERVRQELLKGSTPLDPSSNRKTKSLKDMTLLERSELQRKDPEMYKKLLTK
296478..297491                     PHAGE_Lactob_phig1e_NC_004305: minor capsid protein; AWJ15_01445; phage(gi23455804)     1.92e-60            LactobacillusrhamnosusMPEFSGATAKLNLVEPKVFADYVLEQQTATNRLLSSGILTTDPIIQAQLLKGGTYVTIPTLHSLSGEAQTWNDTSDITVGNVDSYSAIAPQMYQAKAFGYTDFGQLSTGAPVAEQIAGQFASFWNIQDNKLLIAVLKNAFLNADLQAVKSYGMDTPAPLAAGDFIAALSRMGDVASPQLTKIVLNSAAVGAMRDQNLIDTIQPSNGGTPISYYNGIEIVEDDALPVAADGTTDAFIIANGAVSYGLANPENSYEVKRDSLGNGGQTAVINRRTLAMQIAGTSFTDVTKVAGLGYSAINASETSMYDLVGDPRNIGIVDYRFTIDKKFVVAGINAPKA
297719..298093                     PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; AWJ15_01450; phage(gi100010)      3.57e-78            LactobacillusrhamnosusMADTDPVTLADLKTMMEIKTDTQDDVLNLIVTNTTKALRFKLGLKPTEDFPEELSYIALEVCVRRYNRRKNEGMTSYEQEGQSFTFKSNDFDDFADDINDWKEANGKNAKSLGTVSFIPGYPKR
298098..298400                     PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; AWJ15_01455; phage(gi100011)      1.27e-64            LactobacillusrhamnosusMRLDHEITFWTDDEEYNPKTHEYGDPKEVASAAASVTDMGTDKSVQLFGNYAQKAKVIRLVEPITVNWSYLTIDDDATHYVLNTARVPLQNTTLIVGETK
298397..298762                     PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; AWJ15_01460; phage(gi100012)      2.81e-80            LactobacillusrhamnosusMSKASISYNMQIKGMDKLVAGLLKRAKMDVVKQIVKQQTAKLQTRSQQMTGAVYAHPTGATKRGIKLSLEDGGLTGIVGMSMEYNPYTENGTRFMRARPVLNPAFLYQKVQFINQLKQAAK
298763..299167                     PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; AWJ15_01465; phage(gi100013)      1.69e-95            LactobacillusrhamnosusMIQITSPEQELYDYFYAFSQSSGYKTYDHLPMQQENAPYPFVIVGDIQVVPTATKTSLNGNVLITIDIWGDKKQRFTVSDMAERFFRAAIGQVLTDDYRFYGRVEDQSKEFTQDQSVPDTVLNRATLILNLNIL
299179..299781                     PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; AWJ15_01470; phage(gi100014)      5.96e-124           LactobacillusrhamnosusMANELKVLEGMDVVALARKHSDQATVSGQVIPWQTSLSFDPSVDSGSTVTKDGNVATRSSASTDLEVEFLNNTSAIADVMYDSLFDGELLDFWILYRKRKNAEGKYLAWYMQVTVQEDSSDNDPDDHSTRDVTFSVNGTPKRGWTTLDDETQEQVDYVFLGVGKVTDTDKTGGGTVWDKAVDPGTNTAGTAPAGGTGTGA
299867..300199                     PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; AWJ15_01475; phage(gi100015)      2.86e-56            LactobacillusrhamnosusMQLTINGKEYELNFGVRFVREMDKNMGAVMHGINFGMGVAKALAGLNAYDAAVLADTIYSATVTSKKRPSANEVDDFIDSNTDLDSLFKQVKDEMNSANAVKAVAKNMKA
300304..300657                     PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; AWJ15_01480; phage(gi100016)      4.31e-75            LactobacillusrhamnosusMTLVEYELRMEAYQLKQVDRQNEIAQQAWMNQQVQATTGSKNPKPKFKTFDDFFDKKAAIDSVRSNYEPNYEVSQMSTTELKHTRAQVFAKRMAEFQRLKREGKIIPLSERKEEAHG
300650..303739                     PHAGE_Weisse_WCP30_NC_031101: hypothetical protein; AWJ15_01485; phage(gi100030)     7.84e-97            LactobacillusrhamnosusMAESFSVEAILSAVDRNFSGTFKNIASSASKAGDSFEKSTKPAGNFVSTVSKIAGAIGLTKVVGAIGAGVKSMAGELDASSKAWQTFESNMKFLGKTPAEISTIEKSLQSYAQKTIYSSSDMASAYAQFASVGVKGVGRLVKGMGGLAAATDDPKQAMKTLMEQGTQMAAKPMVQWADFRLMLEQTPAGMAAVAKAMGMSTKELVQNVQNGKISTQQFFDGIEKAGNSKAFQKMATSYKTVGEAMDGLQETLANKLQPAWQAMSKVAVGAISGIIDKIGAINFDSVIASIGNFFSPFSTLILNIKTQLSNLGKGDSMSGLSSILRGIGSVLHTIWDLVGSLANVAFVNLIGIAQKVGDAFNSVFGGGKLSGVFNGIKQAVTDFGYAAMGAITTVSDIIANLPWKAIFEGVKASLTGVVNVLKPIAAIVKAAFANDIVKSFAVAILGAVGAFKGISLALGGFSSVIGIFSRMIGPIRGVIAVVTNFGTIAKTAGGIWKAFGLILGMNPWVLLIAGIAAVVAGLVYFFTQTQTGQKLWSGFVSWLQGAWQGLVGVAQTVWNAISGAFTSAISGIQTAWSGITSFFSNLWTGITTTASAAWTAFTTTLSAIWQGAVTAATTVWNVLSTFFTTLWNGIVVAATAVWSTFGGSLTTIWNGIVQIATGVWNMLKAVIMGPILIVIDLLTANWTQLGADLQLIWNSIVSAAGQIWNGLVTYFSGIWSLIQTYAMTVWNTLVSALEGLWNGAVSAASTIWSALSSFFSGLWNGIVSTTEGVWNSVVSFLSGLWSGTVSTAEGIWNALPGFFSGLWNSITSFFSSAWSNIQSIVIGAATSIFNGAKAVWSGFTGMVNDVVSGIKGAFDALRHIDLMAAGRAIMDSFLNGLKAVWGKITDFVGGIADWIRKHKGPISYDAKLLIPAGNAIMNGLNAGLTDKFSNIQKNVSSMAQAIADSAAVTMPAVNTSPFDASLQSLNNSVQGATLSSNLDVNYTRKQTIEVPLYIDGREVARATANPMQTELSRMTRMSNRRKGLF
303742..305721                     PHAGE_Lactob_PLE3_NC_031125: exonuclease A; AWJ15_01490; phage(gi100018)             0.0                 LactobacillusrhamnosusMYDFRETTPFTGSDDNQQPAEAMLIDGQYIEDLIPGYSTLQVSGRELLSQSIEKQTIGKSDGEFIQYARNPSREIVIGYRLAAADNLSFRQAFYKLNSILHGDSHQVSFNDDLSKYWIATFSDIDDVPKGRNAITSSFTLFVPDGVAHAVATKTFDNMPYKDVPVNLLTGTSYMATAESVPKGAFKASNAKTVSVSSGETYTYSIEIPSNNTVDLEAAINLNSKGVFVSFKIGNVIKAGESGISTITLTVPDGIDALYLAVSLTTVNPNSATTIYEAGEKLELGTSASPWSPNPADPEYYADTITVHNGGTYPVDPVITATMHADNGVIALVNDQGAVLQFGSPSEIDGVVRQKSERVYHYDFESEPTGITMNAGALTYPNYRDNPSTPNKQKGIFSYGRPDGYDNAIAYPNTERNPSNYWSGPSMSGKLAANSNGKQNGNFEWRNLIRFATMTNWAGRVEFNLTYEGKIVASLALYDQSTTDDQVMFEGKIHDGNDARMLFHEALPRDLYSRANSFAVISKMGDQLTFRIDRVGGGNVIRPFTIAGFGALPVDGWTVWFSAFSDVLEANMGWQDSYFDWVNVDYWTDVPNRFKEGDVVKIDVAKRVVSLNGAEDPTLQTVGNNWEGFQLLPGKNTIQVLQSDWAKPYTCQVEWQEAWL
305721..308660                     PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; AWJ15_01495; phage(gi100019)      0.0                 LactobacillusrhamnosusMDFYFTDRSWHLLGIATAGEGPIHIVNDTDDQLISAGARTYSGTILFTPETSAKVKSMAAYGNYVLYKDTRGKAVFMTIMESNHDPLLGETTFTAEDAGIDLINETVGPYKADKPMSIAEYINFFVTDSGFDIGLNEIPDLKRTLEWTGESDTALARILSVATQFDHAELEFSFQLNGTSVVQRLINIHKRIGADKRITLYVDKDINKIVTSGNIWDLYTAITPTGGTPEAKDGDTSEQKPITLAGYQWTDPDGRFVLTSDGVLLDPVANQQWSRLLSGGARPDAAGAYINRVNTYEATTQASLLQSALSDLKKHNHPVVNYETDIARLPDNVDIGDTVHLADENERLYLSARLLELKSSYSMDTHTATLGDYLIETDQVAAQYRELAEKIKNIPKTVQYWPWLRYADDDKGTNMSALPAGKKYMAIVWSNETSVPSDNPADYAGHWALIQGKDGADGVPGAKGADGRTSYFHTAWANDVSGQSGFTVSGGDGKKYIGTYSDFTQADSTNPSDYNWALFKGEDGDVGPKGDQGLPGKPGADGRTAYAHFAYANSQDGQTDFSTTAPNRKYIGFYSDFTSGDSTNPSDYNWSLIKGADGADGKDGVPGEPGADGKTPYFHIAYADSSDGKTNFSLDTPGSRKYIGSYTDFTQADSTNPAVYSWQLVQGPKGDTGPQGPQGPQGPQGPQGIPGSKDVPYTYIQLGTPASPKKGDLWWHGTTLNDATALQYYNGSTWIDQSIQQAVLSIKKLQSIEIDSATINSPDINVPFKHVSIEGSGIKTSGSLTLNGSSYVITGTVEDPNGNGNGQLYRTSLNPDGLYSYITEPDGVTKMHSNRVSMGTLELSDHTSGNGNNAKYITSSFTALDAVTFYANEGPYSNPDVAEGTIDYARTGNLVTVTFSVHAQGSTGYKLLANIRPGYSPYYKDRFGYSMRGTSYHSNCDVYIQAGGWYLIPMDSRDWYRGTVSYITRDNYPTGDAHF
308657..308944                     PHAGE_Lactob_Lc_Nu_NC_007501: hypothetical protein; AWJ15_01500; phage(gi77999996)     4.29e-18            LactobacillusrhamnosusMKIKVWLKDDRLLHWAYMADDAKIGATEDGQQIIEADDVSQFFDGHASLVDGRIVADEGYDPANDHPLPGPSPEQQMIAALYARVAKLEDGDGNE
309098..309388                     PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; AWJ15_01505; phage(gi195661217)     4.49e-60            LactobacillusrhamnosusMTFLGYTIGDWAEVISIIGVGVSAGSWLFKKIALDPLRSDIQMLSETINRQLKLHEQSLADLNTHLKAHDEELGSHSVRITRLEDHVGIKGDNDDE
309381..309827                     PHAGE_Lactob_Lrm1_NC_011104: holin; AWJ15_01510; phage(gi195661218)                  2.44e-96            LactobacillusrhamnosusMNNWTELLVSLAVAAVPIIGAWISKQLLANKQALTLVKVLGPLANAAVTAAEQLGVTDKLSGELKKSAAIEAVKNSLKSLGFTKADEQTIANAVEQSYANLKDSLAETYPQKTVDQEASNQDKVAAAAQAAADAVKAQLAPSSVAPQQ
309838..311022                     PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; AWJ15_01515; phage(gi100023)      0.0                 LactobacillusrhamnosusMKFKTKLITLVVAFLAAISFALPLQVNAAKGDQGPDWSKYQGASGRYGTDQDKFVIAQIGGTYGGTYIDQWTYDSQIASAKAAGKRVHSYIWYGVGASSQLGLEALDRYMPRIKAQTPKGSIVALDYEDGASGNMAANTDAILAGMRRIRSEGYTPMYYSYKPYTLAHVDYQRILKEFPNSLWIAAYRDYLPTTKPDYGYFPSMDGVAIWQYTSAFGLSQGLDGNIDLLGVTDNGYSKQPATPSVPVTPVPSQPAKSNAASDTDYAQAGVFKPSTTVNIRTGAGTGYASVGSYAPGESVIYDHVYIRGTYVWARYLSYSGRYHYVALGVNGGESYGSRSSGYTSLVSHTYYTVRYGDSFWSIASKYGISMYTLAANNGKSIYSVIHPGESLYIR
311158..311547                     PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; AWJ15_01520; phage(gi195661220)     2.41e-87            LactobacillusrhamnosusMTKRNMMKAAHAIAQEIVDEVGDYQIALSIALKEVWRQVKLYDKKRFGDVAVLTAAQRLVTPKRDRNANVYGVPAWIIMKNLRQDEADAVLSHTASINIVRETEKAQLVRFDTDFGGIEMWTPKSVLVA
311566..312159                     PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; AWJ15_01525; phage(gi195661221)     1.47e-134           LactobacillusrhamnosusMRVFQKHSSGIILNAIKSYDELTDEEKAAMRLEYGTSKEDYATYQVRRNKHNEIRQVTGYEYSAKKKAEIKAQSSKPSIVDAMNVLYGKGKQKAEAVDKYREAGIDPKDVESALNPVRHGNLLDAYLEEQGTTRYQVSKKGDIASMTLANAAKKARAIEISTRVILAIAKALQKKPGEVLDGLILTEVHLDEKGQRV
312156..312398                     PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; AWJ15_01530; phage(gi195661222)     1.42e-47            LactobacillusrhamnosusMSEGFHYASENELFTEFILVLSQTLQELGDNQYDISVGPDAHAGDKEMVPVIKALPEVLKKHKGALNDLYQIYRKQRLAD
312662..312704                     attR                                                                                 N/A                 TTTGAAATAAGGTAAATAAAGAGCTCCAGAATCATGTTGGAAA
complement(312821..314065)         PROPHAGE_Staphy_N315: transposase; AWJ15_01535; phage(gi15927655)                    1.02e-50            LactobacillusrhamnosusMSQYDPTLSVLGIPDHNIKVAFVRHEYRGNGVRRRQYHVIDAELTYRLTRCPLCGFEALHPNGFYTAHVRVLNGVEMPTVIDLHKQRWRCHNCYHTVSAKTPLVQPNHTIATHMTERIMKLAHERLPVKTIARIIGISASSVQRIIDQNLKLRPARRLPTRLCFDEFRSTHGMMSFICLDADSHHLIALLGDRFNRTIKNFFIAHYSLAERTRVQTVTMDMNAAYQTIIHEVFPKAQVVIDRFHIIQLAARALDQVRVQALKQLDDKHSRPYKIMKTNWRLFHQTAPDAKHKQFLFGLNEYVTQQEAIDIALDTEPKLKQTYETYLALHDALMVKKHPAELANLLATYEPNCTAMDMTIATLKRHKVAVLAAVTSPYSNGPIEGVNRLIKSLKRSCFGFKNQLNFFKRIYQITA
complement(314461..314748)         antibiotic biosynthesis monooxygenase; AWJ15_01540                                   N/A                 LactobacillusrhamnosusMKIINVTLHVKPELASDYQQFISQLVAGSRAEAGNLSYDHFQSLTDPDKYEIIEHWQDAEAVAAHNETSHFKQFLAGIDSFLDAPLEIIRMDYSA
complement(315044..315895)         PHAGE_Strept_315.3_NC_004586: putative mitogenic factor; AWJ15_01545; phage(gi28876265)     2.55e-13            LactobacillusrhamnosusMKTKLMKYLTPVLIVSLLLTGCSTQGTSKSTSPSTDPVADQTKLNNKTNSAISSLDEAIADKREEVSSLKATLDNSKPSTEASKTTAGTTDANTLANLDYTGQQEITVNNNDPAFSKNDLSTAKGAWAAYSDLDSLNRVTDANALLNRSLMPSAKREPLTWNPTGWHNKKTAHGWLYNRSHLIGYQLTGENNNPKNLMTGTQTLNSPLMLAHEMDIAYYLKQSNDHYVRYEVKPIFRGNELVARGVQMRAQSIGDNTIHFNVYIFNVEPGYTINYADGTSTKN

#### region 3 ####
573073..574269                     PHAGE_Bacill_G_NC_023719: gp522; AWJ15_02730; phage(gi593777977)                     1.85e-44            LactobacillusrhamnosusMQLDLNQPDFKAAIPILKKIEAAGYEAYFVGGSVRDALLGLPIHDVDIASSAYPEEIKRIFKRTVDTGIEHGTVMVLDHGTGYEVTTFRTESAYQDFRRPDHVTFVRSLAEDLKRRDFTINALAVRHDGTIIDLFDGLTDLKNRQLRAVGDPHERFHEDALRMMRAVRFESQLGFHIEATTKAAIAANAPLLKHISVERIAAEFNRLLVGIDRRAGMQDFLDTHLFAYAPKLAPHQAALQQFSELPNQAFTSIASGWTALIFMLKVAPESFLPAWKQSNDLMGLVDQAVTLLRKMPTPTAWDLYSAGSAAVAVVSEVAALMDHQFVPASLTTAYEALPIHSKKTLALTGRDLIQAGVRPGPAMGKILHQIEYRVVDGSLPNDSKKLLAAAIEMSREPS
574394..574849                     PHAGE_Clostr_phiCD211_NC_029048: hypothetical protein; AWJ15_02735; phage(gi981220948)     8.72e-05            LactobacillusrhamnosusMAEHVFEQLVFHFRNGDEWTVQHDELADVWISRVTTSYGRIHGGQIQEIHPCKSFKVEILPEADHVKSSDINTGSLEMGMFGRATKYQDIEKMDLVFDDQTKKQVQIYFPFKQKDPSGLDNEYQTSKLAKNGHLYIVIDAQHTVDDEYPRI
574998..576911                     PHAGE_Bacill_G_NC_023719: gp245; AWJ15_02740; phage(gi593777701)                     2.85e-12            LactobacillusrhamnosusMQTLTAQGLSKAYGDKQLFNQIDFLINEGERIGLIGVNGTGKTTLIRSLAGMESVDAGTIKTPKQYRISYLAQIPELDPDLPIMDAIYHGDSPVFQAIRQYERALAAYTKDPLNQAKTDAYTKADAKMTQEDAWSAETDIKTILTQLHIGDLTARVGSLSGGQQKRVGLAQVLIESPDLLLLDEPTNHLDFDSIAWLENYLSHYRGALVVVTHDRYFLDRVTNRIFELDRGRLFQYQGNYQAYVAKKAEQLEAEKSAGHKQAQLYRQELAWMHAGAQARSTKQQARINRFKALQKAKDEAPAPDQQLDPIQIASTRLGKKVIEMHDASLRFDQQVILNHFDWLVQPNTRIGITGQNGAGKSTLLNIIAGKQALDSGTIELGETVRLGYYTQLNTNLDPKKRIITYLQEVGEEVVQADGQRVSVTQMLEQFLFPRSMHGTLIGRLSGGEKRRLYLLQVLMRQPNVLLLDEPTNDLDIATLTVLEDYLDHFSGTVITVSHDRYFLDKVADQLLIFDGNGRIERAVGEFSDYLAKQKPQSAASKTDSASAKPKAPAKKAAPKQKSKLTYAEQIEYDKLQQELDELDEQLAKVKAEMAQVNGEDYVKLGDLQAQLDAINQDIDQKFDRFAELDQYVSSSER
576348..576360                     attL                                                                                 N/A                 CGCCTATATTTAC
576928..577878                     PHAGE_Staphy_SPbeta_like_NC_029119: thymidylate synthase; AWJ15_02745; phage(gi985761245)     5.64e-157           LactobacillusrhamnosusMLEQPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELLWFLHGDTNIRFLLQHKNHIWDEWAFEKWVKSDEYRGPDMTDFGHRSQKDPEFAAVYHEEMAKFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIVSAWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYDPYPAIKAPVAV
577995..578486                     PHAGE_Bacill_BCD7_NC_019515: dihydrofolate reductase; AWJ15_02750; phage(gi422936066)     1.02e-26            LactobacillusrhamnosusMTAFLWAQDRDGLIGKDGHLPWHLPDDLHYFRAQTVGKIMVVGRRTYESFPKRPLPERTNVVLTHQEDYQAPGAVVVHDVAAVFAYAKQHPDQELVIAGGAQVFTAFRDDVDTLLVTRLAGSFEGDTKMIPLNWDDFTKVSSRTVEDTNPALTHTYEVWQKKA
complement(578622..579263)         hemolysin III; AWJ15_02755                                                           N/A                 LactobacillusrhamnosusMRVSKSSHYEFNNEMFSAITHAFALGLAVTGTIALGIKGVNSGSQVELFSLIGFGVSLMLLYTASTAFHGFYFSKARHVLQVLDHSGVFILIAGSYLPYCLVAIGGKLGIGLLIAIWALCLGGIAYKLFFLNRFKHLETMIYVVLGWLCLVGMVPLWHHLGPVGFWLLVAGGVAYTGGAMLYLQKGIPYIHVIWHLFVILGSLCMYLSIYFYL
579504..580346                     PHAGE_Staphy_SPbeta_like_NC_029119: DegV domain-containing protein; AWJ15_02760; phage(gi985761237)     7.35e-25            LactobacillusrhamnosusMANIKIVTDSSVQLTPEEISQHNITVVPLTIMIDNTVYIDGETITREDFMDEMAAAQNLPKTSQPAIGTFTDVFDKLTADGSQVLSIHMTETISGTVNSARQAAQLVKGDVTVIDSQFTDRSMAFQVLAAAEMAEAGKDMPTILDKLKQIRDHTILVLGVTNLDNLVKGGRLSRVSGLISSFLNIKVVLQMEHGELKALRKGRGMKTINNFVTETISKMAKLTDIQSIGVSTAGAKEIGEDIGRRLAEVLPNVPILVRPTDPVIATHTGPGAFAITYYTD
580609..581454                     lipase; AWJ15_02765                                                                  N/A                 LactobacillusrhamnosusMRTLKNFFISCGVLLLACLLAFGGWQLFGPVSSPSEVKVVANTPKHLQLTALGDSLTYGVGDATNNGGFVGLTKGELEATGQYQVTTKNYGVSGNTSGQILTRVNKQPKIRADLKRANIITVTAGGNDLMHVLQKHFLTLSEKQVTAGSVAFQKRLATLLTTIRKENPTAPIYVFGIYNPFYVYFPKMTAMTNSVKAWNQATQKTLQQFDRTYYVDIDSVLSNGETAANKASAKEALKEATSGDGNPLIFSQDHFHPNNAGYGQMTKQLMKQMKATKKAWE
581459..582100                     hypothetical protein; AWJ15_02770                                                    N/A                 LactobacillusrhamnosusMQAKKRSLQRNAAKQKAVRTGINWWKWLFLILVGLLLGTGIWFTKTALMPVKINSTPQTTMTSKDPVFTVKVTKNSANRIMAHYLKSYLKDSKIKYAVTLGTNEAALSGSFKFLGNAVKFQLTFDPLVLKNGDVLLKAKNLNIGALPVPISFVMSYIGNSYKIPKWVSLDSKAGTVVLKLTQFKLQNGMTLKANKLDLTNDDLEFAVYLPDEE
582126..582644                     PHAGE_Temper_phiNIH1.1_NC_003157: putative methionine sulfoxide reductase; AWJ15_02775; phage(gi16271776)     5.25e-20            LactobacillusrhamnosusMKKETAIFAGGCFWCMVEPFEEQPGILNVVSGYTGGHVANPTYEQVSSHTTGHTEAVEITFDADVIDYPSLLNIYWQQTDPTDAMGQFQDRGDNYRPVIFVKDEAQRQAAEASKAALEASGRFSDPIVTKIEAAKPFYPAEPEHQQFYAKNPRRYAMEHAQRQAFIDKNWKD
582647..582889                     hypothetical protein; AWJ15_02780                                                    N/A                 LactobacillusrhamnosusMHRTFYEYLMTLRNPNDHSEVAEFAKNAFLDQSFPKHEKDYHRLSDYLELNGNYLPTMAIFDETYRDYEASESTGGDSYQ
582858..584300                     PROPHAGE_Escher_MG1655: carboxy-terminal protease for penicillin-binding protein 3; AWJ15_02785; phage(gi16129784)     1.23e-29            LactobacillusrhamnosusMKAQEAIHINKHKVPLWAVIVLFLVALGGGAAGGYALSYQQAQQSVLKTGVPKALAPVISAYETVTNNYYKQVSTTKLTDGAIKGMLSSLDDPYSVYLQNNDKTNLDDTISASFGGIGATIQQDHNSLSIASILPGTPAKKAGMKVGDVLLKVNGKDVSKKTVTQAVAKIRGKIGTTVAVTVKRGSKQATFSMKRKKITVDTVIGKLAPANKQVGVITISTFSEPTVKQFKATVKKLRKEGAKSFILDLRQNPGGMMTAALSISSMFSKNGQTVMQIEDRNGAKEVYKAGKKLDGGFKVTEKTAVLIDGNSASASEITAAALHQNSQIPLVGEKSFGKGTVQNVGEMSSNKELKLTVAKWLTPDGTWINHKGLTPDVKVAYPAAAKITLINATQLKPGDKGSDVKSLQQMLKALKIGSATVNGQYDDATQAAVKSFQEANELDASGTADQDTLAALAQKLSAQLTKDDPMVAAAVKEVTK
584401..584730                     hypothetical protein; AWJ15_02790                                                    N/A                 LactobacillusrhamnosusMIELEGFAVYPNKVERAKEWMSFLKGHQEAVNETLGPENIEVERIFSVSVNGRMYLCWYSEQTAPIPDVTRSTNPIDQVHVDFWKECIDEKAPRLEFKLENEFKRPGVN
584793..585341                     hypothetical protein; AWJ15_02795                                                    N/A                 LactobacillusrhamnosusMENKGVNLTTYWKYLNTIVVLIVFFLISLIFASHTMIQTLLGVGSLAWFLFFLIREIYLNNRRTQRTRFQVRLSHGLIVLGLLLFNTSVHQTVISTFGQTDMIQFWGEHEAAIHMNGRAYHLIWTKRSFHSTTYFYNLYERRGLFFYRVNSEVMSWTINPPEQRDYGAVRTFLYHGEEQGVK
585427..586137                     ATP-dependent helicase/nuclease subunit A; AWJ15_02800                               N/A                 LactobacillusrhamnosusMNEQANFATKVLTLHQRLASVKMTLPGCYQLVNPYSGKQKHAVDQITAAFYHKYFNDNHKRRLILGSSPARKGTAITGVPFEDAAELQAETGIAVAKFQIKPSSTNFLYDVMQQYGGKRKFYSDFYMSFACPLGLSKISAKGNVINSNYYETNVIKDRLMPFIVASLQEQIKLGVDTSVCYCIGSGENFKVLTSINQTYHFFGSIVPLEHPRYVMQYHFKDRARYIQKYVAALNCK
586182..587012                     ribosome biogenesis GTPase YlqF; AWJ15_02805                                         N/A                 LactobacillusrhamnosusMAKARKQVQEKIKQVDLILEVVDARTPESSRNPMLDELVGDKPRLIILNKQDLADPVLTNEWVRYYQTQGFAAIAIDAQHAKRLQQIPQAAAKLMAEKIARKKARGIRNPMIKAMCIGIPNVGKSTVLNRLVRKNIAVTGNKPGVTKNQQWLKASDNFQLLDTPGILWPKFASQTIGMRLAFTGAIADAVFQEDVVGLYGLTYFMAHYPAALKKAYHLTDTDLQAAPHDVLVKLTKTQGFGEEFNRMAERLIFDARQGKLGRFTLEKPGELDADAE
586996..587754                     ribonuclease HII; AWJ15_02810                                                        N/A                 LactobacillusrhamnosusMPTLSEYKTLLQADHVDPAVLTALEQDSRIGARKLLAAYQRRQDHQAAEAVALRYRSRYERKLWKMYSHVAGLDEVGRGPLAGPVVTAAVILPHQFKWPVNDSKQLTAHERDVLYPHILTEAIAVGIGVADNHEIDRENIYHATELAMAQAVSHLRVAPEFLLVDAMHVPVNLPQERLIKGDANSISIAAASIVAKVIRDRLMVMYDRVYPGYDFKDNMGYGTKAHLAGLATHGVTPIHRRSFGPVRHCLKS
587802..588617                     PHAGE_Thermu_OH2_NC_021784: SMF family protein; AWJ15_02815; phage(gi526118339)      3.84e-29            LactobacillusrhamnosusMTLRDFLLAWHLATHQNPRLAVSLQQAILKKADLSTYQNDLKQKLTPAVARILSAARETPYLTFVDTAYPPRLREIPQPPSVLFYQGNLGLINQLTLGVVGSRKATNYSAEALTRLFPQLPPMTIVSGLAAGADSMAHEAALAAGLPTIAVIANGIDQVYPAKNRSLQRQISRVGLVVSEYPPGTAPQRFQFVARNRIIAGLAHGVMVTEAEIKSGSLITANYALQHNREVFALPNRFGDVLGAGTNALIQAGAAIVTGPETLMENLHFYP
588863..590947                     DNA topoisomerase I; AWJ15_02820                                                     N/A                 LactobacillusrhamnosusMADKKLVIVESPAKAKTIEKYLGRTYKVVASLGHIRDLPKSQMGVDVENNYKPKYISIRGKGDVIKSLKKDAKKASRVYLAADPDREGEAIAWHVSHILGLDPNAKNRVVFNEITKDAVKNAFKTPRGIDMDLVDAQQARRILDRLVGYSISPLLWKKVKKGLSAGRVQSVALKLIIDRENEIKNFIPEEYWSLDAEFQKGRSKKFSASFYGIKNKKMALKNNEAVQKVLSQIDKTKPFSVTNVVKKERKRFPAPPFTTSTLQQEANRKLGFRTRKTMMLAQQLYEGINLGGKLGTVGLITYMRTDSTRVSNVAKTETSHYLHEKYGEAYAAVKIRQGKLQEGAQDAHEAIRPTSTLRTPESLASVLDKDQMKLYRLIWSRFVASEMTPAIIDTVAVTLNQNDVTFRANGSQMKFEGFTKLYVSSRDSDEKDNVLPPLAVGDAVKMLKTDPAQHFTQPPARYSEANLVKALEENGVGRPSTYAPTIETIQKRYYVKLNARRFEPTELGEIVNSLIVEFFPDIVNIKFTANIESELDSIETGEANWVKVIDQFYKPFEKEVAHAETGIEKIQIKDEPAGFNCDICGAPMVIKMGRYGKFYACSRFPDCRNTKAMVKEIGVICPKCHKGQVVERKSKRNRVFYGCSRYPDCDFVSWDKPVGRDCPVCGHFLVEKKSKAGTQVVCPNNDYKEALQKA
591117..592436                     methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase; AWJ15_02825          N/A                 LactobacillusrhamnosusMPTVNVIGAGLAGSEAAWQIAQAGVDVNLYEMRPVKMTPAHHTGNFAELVCTNSLRANQITNAVGLLKEEMRRLHSIIMQSADATAVPAGGALAVDREPFSELVTRQLTNHPHIHVIHDVLTDFPAGITVVATGPLTAPGLADAIVALNGEAGLSFFDAAAPIIDASTIDNDIVYKKSRYDRGEAAYLNCPMNKEEFQAFYKALVTAEVAEGHDFEKMTVFEGCMPIEVMAKRGIKTMLFGPLKPVGLEDPKTGKTPYAVVQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGLEHAQIVRYGVMHRNTFMKSPVVLEPTYASKRRGDLFFAGQMTGVEGYVESAASGLIAGTNAARLALGQTPIAFPQTTAMGAMAHYITHTSPSHFQPMNANFGIMPPLAVKVRNKKERNQQLAERALNDLATFQTELQGAHQS
592552..592564                     attR                                                                                 N/A                 CGCCTATATTTAC
592637..593533                     PHAGE_Thermu_P2345_NC_009803: XerD-like integrase; AWJ15_02830; phage(gi157265299)     6.13e-20            LactobacillusrhamnosusMKPLAAFQEYLTVERQYSPETVTAYLNDIQEFQAFLKANGGFTDFSKVDDLDVQTYLTDLNKQALARTSIARKISSLRSFYRYLVRIDVVKRNPFELVELKKQHHHLPQFFYEAEIQELFKTVEGKTPLDQRNRALLEVLYGTGIRVSECANLTLNQVDFNTGLLLIHGKGNKDRYVPFGRYAQRALQTYLKDGRQTLMNKRDVQHRFVFVNQYGRPITARGIEYILDQLIKQTSLIANIHPHMLRHSFATHMLDHGADLRTVQELLGHASLSTTQIYTHVTMAHLKNEYMKYYPKHN

#### region 4 ####
1557723..1557802                   attL                                                                                 N/A                 CATTGACACCCTGTAGTAAGCGAGTAAAGGATGGCATTGAATACGTCATAAAGATCATAACGACGCGGTCTTGTATGCTT
complement(1563075..1563818)       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; AWJ15_07165; phage(gi371496158)      1.30e-17            LactobacillusrhamnosusMATNYVIAKQVSKHFGHQQVLNQIDLTLPAGMIYGLIGPSGAGKTTLIKSILGMEAVDSGTVKVMDTVMPNRAVMAQVGYMAQSDALYETLTARENLTLFGQLMSVPKIKLAQMIDYAAGLVDLTSQLDKRVSGYSGGMKRRLSLAIALIQDPQLLILDEPTVGIDPELRQQIWTELNKLKDTGKSMLVTTHVMDEAERCDYLMLIRHGIALAEGTPAALKQQYAVDTIEQVFLKAGRMQDANDGNR
complement(1564065..1564532)       PHAGE_Clostr_phiCT19406A_NC_030950: hypothetical protein; AWJ15_07170; phage(gi100019)     2.54e-21            LactobacillusrhamnosusMKYTKTKAVLNQLVADLSQMSMIIHQTHWYMRGPNFLKLHPLMDEFMEEIDSQLDVISERLIALDGSPYSTLKEMAENTKIQDWPGEWDKTTPERLAHLVDGYRYLEDLYQHGIEVSDVEKDFSTQDIFIGLKTAIEKKIWMIQAELGSAPEIDE
1564653..1565336                   PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; AWJ15_07175; phage(gi985761246)     5.42e-79            LactobacillusrhamnosusMNYFKGRHFQQDIIIVAVGYYFRFSLSYRDIVELLRDRGVSVHHTTVMRWVHHYGPIFKALWRQHQTSHTKSWRIDETYINVKGHWTYLYRAIDSNGLTLDFELRKHRDYVAAYHFLKRLLTTNGRPDRLVTDQYRATLKAVKHLMKQDYLSKSAHQCSKYRNNLIEQDHRFIKRHQVRSASFQSIRTASATLSGIEVIHALRKKTRRELSLIGFSAVDELKAMVPA
complement(1565351..1565533)       hypothetical protein; AWJ15_07180                                                    N/A                 LactobacillusrhamnosusMKEADQKRAATAFVKRWQDRGNERQDSQTFWLDLLETVYDIPNPGGSGANSLRVCLLPSC
complement(1565654..1565932)       PHAGE_Entero_N15_NC_001901: gp48; AWJ15_07185; phage(gi9630515)                      1.24e-06            LactobacillusrhamnosusMAKNISFDDYLAEQLKDPEFKAGFDAESAKLESAVALMSERERAGLTQRELAERADVPQSTIARIEHGQNTSFDTMSKIAFALGKKLKVEFT
complement(1565934..1566293)       PHAGE_Entero_N15_NC_001901: gp49; AWJ15_07190; phage(gi9630516)                      3.57e-09            LactobacillusrhamnosusMENPKFEFYTRPSGHNEFQEFLDSLKPVEKQKLVTVIAKTQKFGLQVAARQMWIRKISDGIFELRTTGSNIQRGLYFHVEGPRYVITHGFTKKTQKTPVSELNHAKELRTEYYDNLGGK
complement(1566447..1567316)       PHAGE_Entero_phiFL1A_NC_013646: hypothetical protein; AWJ15_07195; phage(gi281416360)     2.75e-05            LactobacillusrhamnosusMDSLVRDCDEVIGIIFDSKFDHKHPLEVFDTAILTLYSSLIDKYKTVNILQDQRVTTEVNLIERSFIEQYVYLLFILDKHTKERGRAYLINQRYESYRQTKRLLDNLSDEKQVRELKASIDGIIKADRTDRQTFADGLSYFSGKFENLFKPALLRNEQKRRKGLSVPPDKKIKRIWYNVAADGTNNFRDLCRKLGLDDLYFGFYGPLSMNVHGVDSPANLVFDNITDPGRNVAEVVLQAGHDEQGTVSLLRAFLIEITLKVCHHYAISRNKIPNQMYLKQKIRILSHQN
complement(1567319..1568557)       DNA-binding protein; AWJ15_07200                                                     N/A                 LactobacillusrhamnosusMDIEELKSWLSKPEDDHHDFKEHWYHKGQKPELVKDIFSFVNTAHHEDCLLIIGVNDQHKITGVENDENGRLDQQQLIDFVRKLPISGEFIPRLEVSTVYAEEHEVDVIRIFNSENVPIFLGKKWNEKGLPGNLILPGQIFTREQDVNTARDSTADYHQVEKLFKKHLRLDVSIEERYKYVLTDTSNWRYTEADGFVFQYNLNPDFYMVLCEDDQSRYKAEAYSLDQFRTKMSWQYLKIKYRQSTIETLLVVWLDGGRLMVVTPNFGFIRKVGSDSLAYYCLIENTVAGRVQNLFSTGLPLLANAHSLDEFYNGVVLFHSEEEKEQLEFLLGGQTDEIRKLIEPKEHEIAGLTGRMAMDFNSSDQEVQPSNIRYMLLQHTLGRFMNECLLEYRSGYDVTSVIGRWQQKNARN
1568955..1569209                   PHAGE_Bacill_SPbeta_NC_001884: IMPB/MUCB/SAMB family protein; AWJ15_07205; phage(gi9630142)     5.35e-10            LactobacillusrhamnosusMIQPGYLVHDIMCIDCKSFYDSVEAIRRGIHPLAADIAVLSKGDSPGGLVLATSPNCKKRYHVGLSTLRFQLRDDMQVELAHAD
complement(1569396..1569866)       PROPHAGE_Xantho_33913: IS1480 transposase; AWJ15_07210; phage(gi21231089)            5.14e-58            LactobacillusrhamnosusMIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINGLPQAILVTRANVSDRSGALAMFSLASQNLELVQHVMVDGGYTGNDFADQVKLILNAKTTVAKRNELHMFTVLPQRWIVERSWSWLDKCRRLWKNCERALNSSLQMVVLAFLKIVLKRY
1570032..1570111                   attR                                                                                 N/A                 CATTGACACCCTGTAGTAAGCGAGTAAAGGATGGCATTGAATACGTCATAAAGATCATAACGACGCGGTCTTGTATGCTT

#### region 5 ####
1776063..1776074                   attL                                                                                 N/A                 ACGGCTAAATGG
1778416..1778487                   attL                                                                                 N/A                 GGGATCTGGTGCAAACAGTCTGAGAGATGACCATCTAACCAGCTATTGATCCTATGTTGAAGGTTATGCAGC
complement(1778479..1778898)       PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; AWJ15_08255; phage(gi985761246)     4.30e-32            LactobacillusrhamnosusLYRAIDSNGLTMDFELRKHRDYTASYHFLKRLLTTNCRPDRLVTDQYRATLKAVKHLIKQDYLSKSAHQCSKYRNNLIEQDHFIKRHHVRSASFQSIRTASATLSGVEIVHAIRKRTRRELSLIGFSVVDELEALLAA
complement(1778868..1779161)       PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; AWJ15_08260; phage(gi985761246)     2.13e-19            LactobacillusrhamnosusMNHFKGRHFQKDIILVAVGYYFRFSLSYRDIVELLRDRGITVHHTTVMRWLITMAPSLRLYGVGIKQLTLKVGESMRPIFELKAVGPICIALLTVTV
1779456..1780562                   anion permease; AWJ15_08265                                                          N/A                 LactobacillusrhamnosusMGTVFRRTISDKIFITALVCAGLSFLIGTPQFTDINWNTIGTLLSLMIGVQLLRTMHILDALSDLLLVKSQNTRQMTQFFILLAFGGSMILTNDIAILTLVPTFMTLNRHQKGAIAYPLTLIVMAANLGSSFTPIGNPQNLFLVTSYHIDILTFFKLSAPLMIASLILLVALSLCVPRKSLTMVPAKSTTIHVSQIGIATSLIGFIMLGIFNLIPISLVIIVTIIVGLRIDWHVFQHVDYALLLTFVCFFLFVSAISHNSYITLWLNQLMQTPQSVYIASLMTSQAISNVPAAILLANFTKYLPALFLGVNIGGLGSIVASLANLLAVKQLLLFSEEQSLWHFLKVFTVLNLIGLLILGVFGWLYLLM
1780756..1781136                   hypothetical protein; AWJ15_08270                                                    N/A                 LactobacillusrhamnosusMNWQKVWAVNKYWVMSKSQQQYDYIRLLAKNNQWTPQKTQELGNIIDSLESVSPTKQTLTTTYQHIWGYFKKKCTDEELHQYLRLLDNLQPNNDKLGPFLAQLTNKYQIDYLQKSRIIIELNERKD
1781331..1781723                   transposase; AWJ15_08275                                                             N/A                 LactobacillusrhamnosusMNSILQQIITEMMTSFGNSAFDLLTGKLDFANLVIETQKSFGKTLCQLLGVMLEQQDQVLADSSYRKQFFKIKDMRERHVDTSIGTVSFRRRYYEDVRTNERIFLLDEQIGLEKSSRLSLDLKAKLLEPV
1782090..1782290                   PROPHAGE_Xantho_33913: IS1480 transposase; AWJ15_08280; phage(gi21231089)            8.80e-21            LactobacillusrhamnosusMIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINGLPQAILVTRANVSDRSGALAMLISLAKL
1782308..1782559                   PROPHAGE_Xantho_33913: IS1480 transposase; AWJ15_08285; phage(gi21231089)            8.73e-26            LactobacillusrhamnosusMVDGGYTGNDFADQVKLILNAKTTVAKRNELHMFTVLPQRWIIERSWSWLDKCRRLWKNCERALNSSLQMVVLAFLKIVLKRY
complement(1782594..1782803)       hypothetical protein; AWJ15_08290                                                    N/A                 LactobacillusrhamnosusMPKKLINIVMLAMLMLTQVGSAVVPVADNGETNITEHDRAAPKSDPSSHQNDASGQAAISQDTIESDKK
complement(1783081..1783638)       hypothetical protein; AWJ15_08295                                                    N/A                 LactobacillusrhamnosusMAEKYTAEIVPLNAEKIGTAPHGAATFTIDGAQMKIHIDMFDTPANVQHWEHFHGFPDGKPAEIATAAQDANGDGFVDLPETEPVSGTTMVPFDAEPAKMHVPNDSYPVADAEGHYAYDKLVDLKELQTAFKAAFGSDDLQLDKRVIYIHGVPDTLKLPATVQGTVMNYDARVTLPIAVGKIIKA
complement(1783839..1785167)       sodium:solute symporter; AWJ15_08300                                                 N/A                 LactobacillusrhamnosusMKSTTKWVTRWPERISYGLSDAADNLVFQMMTTYLLFFYTDVYGLTPSAVAILFVVARVADVVESFVIGIMIDHTHSRFGKSRPFFLWYSLPYVIFAVLTFVTPNFSYNGKLIWAYVTYLGLGFLYTAVNLPITSILPTMSQNTRELTLLGVIRQFFGSSVQIVVAVFTLPLVAFFGHGNQQKGFLGTIIVFSLISFLLIINTFVHVRERFANPEIAHQPLTTVLKMLKHNQPWIVMSIVILMYWLVTAIKNQTTIYYFKYTVGNENLVPLANSFTLAALIGVLLIIRITEVRSKKQTMLRGILMALVGQAVIAVGVYTKILWFLFGGVLINSIGNGIIIGLVSIMIADTIRYGASMGIQAEGILASTDDFGVNVGLGVGGLITAGLFHFSGYVANRTQNAATLTMINLNYVWIPLVIYVGMYFVLRLYDEGRIERAIEARK
complement(1785335..1785922)       PHAGE_Vibrio_PWH3a_P1_NC_020863: resolvase domain-containing protein; AWJ15_08305; phage(gi472342379)     1.72e-27            LactobacillusrhamnosusMAKIGYARVSSKEQHLDRQLAALKDVDKLFTDKLSGANTNRPELQKMLAYIREGDIVMVTELDRLGRNNHDLTKIMNSIQNKGATLDVLNLPSMTGIADPNLRQLMTNLIIELYKYQAESERKRIIERQQQGIALAKQQGKYHGRKPQYAKDDPRLQHAFKLYRAGMSDIDVSRNTVIKRTTFIRYRVKYGIKRK
1786147..1786512                   FMN-binding protein; AWJ15_08310                                                     N/A                 LactobacillusrhamnosusMDQKFLDVMKHEGPATIVTINAQPAHVVNTWMSYVQVTDKQLLIPAAGMHSIEQDFSTDNHVIITVGSKEVEGTQGPGAGFHVYGTGQFLTSGDDFDTMKKKFPWITRVLKVDIDKIEQKI
1787243..1787901                   PHAGE_Spirop_1_R8A2B_NC_001365: putative transposase; AWJ15_08315; phage(gi9626114)     2.38e-08            LactobacillusrhamnosusMVGYAVHCAPHTIYHWIYQRQVDFQPSQLFDHGERHKRRQDLRSRYNQSVGTSIEIRSESANRRTEKGHLEMDTVRGGRGSKAAALTIVDRVTRLMATTKLENLSQNAVIKGFARLMVDFPGPVRSVTVDHGKEFSCDQALTKRYRIPVYFSTPITRMNGAQMNGSIENFATISRREHSLIRFQRPIFNKPQRLSITNLENVSVGKPQFKQASLFLGGAA
1788059..1788301                   PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; AWJ15_08320; phage(gi48697273)     1.42e-10            LactobacillusrhamnosusMPIRYSQDFKDSLVKLHQEGRSLKSLAEEFGPSKDSIAIWVKQATPIMIKGQSKTLKDVKQLEKRLAILEEENEILSRIA
1788348..1788998                   PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; AWJ15_08325; phage(gi371496158)      3.48e-26            LactobacillusrhamnosusMNSLISLEKVNYQIADQHILHDVDWQIPAGAHITLTGPSGGGKSTLLRIIAAMISKTSGTLIFDGQPIESHDPIMYRRQVSYCFQQPTLFGETVADNLAFPYQIRKQVMDTQRVVTALNNIGLSERTLHQPITELSGGERQRVALIRNILFLPKVLLLDEVTAGLDENNKQIVHACLRQLNEQDHVTTIMITHDATEIAAADQLAKVIAGRLEVHA
1788995..1789750                   hypothetical protein; AWJ15_08330                                                    N/A                 LactobacillusrhamnosusMNLAVNNTSLFLAAMLVLVALGISLWQKLGLDRDIVIGVVRAVVQLFIVGYLLKYIFRVNNLWLTLAMMGFIIFNAAWNAKKRGPGIDHALAISLLAIFVSTGVTLGVLVLSGAIKFVPSQMIPISGMIASNSMVAIGLAYRSLNSQFHDQRQGVLERLALGAGLLDASIAIVREAIRTGMSPTIDSAKTVGLVSLPGMMSGLIFAGVDPVRAIKYQIMVTFMLLSATSLGSIIACYLAYRNFYNEQKQLK
1789816..1789887                   attR                                                                                 N/A                 GGGATCTGGTGCAAACAGTCTGAGAGATGACCATCTAACCAGCTATTGATCCTATGTTGAAGGTTATGCAGC
complement(1789879..1790562)       PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; AWJ15_08335; phage(gi985761246)     5.72e-77            LactobacillusrhamnosusMNHFKGRHFQKDIILVAVGYYFRFSLSYRDIVELLRDRGVTVHHTTVMRWVHHYGPIFKALWRRHQTAHAKSWRIDETYIRVKGRWAYLYRAIDSNGLTMDFELRKHRDYTASYHFLKRLLTTNGRPDRLVTDQYRATLKAVKHLIKQDYLSKSAHQCSKYRNNLIEQDHFIKRHHVRSASFQSIRTASATLSGVEIVHAIRKRTRRELSLIGFSVVDELETLLAA
1790622..1790807                   hypothetical protein; AWJ15_08340                                                    N/A                 LactobacillusrhamnosusLHQNPFASNDSGAPLGFTISDGKLGTQVQAEINKFKEAHEAARNFDFTALLGTLGPMIGNGN
1790916..1791140                   hypothetical protein; AWJ15_08345                                                    N/A                 LactobacillusrhamnosusMSIEIYTKPNGLGIPAEDYKPIYVPVSEHEPNLEWIPWAAGAVVLIATIIMAPEVAATLVGTAAKLLPATFIAA
1791160..1791663                   hypothetical protein; AWJ15_08350                                                    N/A                 LactobacillusrhamnosusMGLLQLMLGVLGFTVLLSSLFLTILVRRQAAHQKRSEAYIEVAKYLGENPTLFKKVNQLVKLESTTKILSLVFFLGGWIVYSINDFLIISLDDSVRVMILWTSIVLFVILTIVQMMLEFRHKKLLAFPLSNISPVENTAGEKRWILSKILLMIGTAILTTWLQLVAQ
1791776..1792426                   PHAGE_Clostr_vB_CpeS_CP51_NC_021325: putative resolvase; AWJ15_08355; phage(gi509140089)     1.34e-26            LactobacillusrhamnosusMAKIGYARVSTRDQNLARQIEQLHDAGVNKIFQEKLSGKNADRPQLKAMLDYIRDDDEVVVLSLDRLGRNSHDLTDIIETIRHRGAQLNVLNLPSFASIEDPNLRNLITTIIVELYKYIAQEERETIKIRQQQGIEIAKRQGKYKGKIREYGPHSPNRQKRYIYKEACRLLNRKKDGDETLTKRQIARMLGIAPVTLYRIEKYQAEDLANVPPSER
1792432..1792716                   cytosolic protein; AWJ15_08360                                                       N/A                 LactobacillusrhamnosusMIDLRGKRILFTGRLRSFRRFQAQQLATILGAKPVNGIDKNVDILVVGIISKPYDQLLTTQKLTYARTYGIPKIDELAFISWCQWRLDQLKATL
1793140..1794558                   PROPHAGE_Xantho_33913: IS1478 transposase; AWJ15_08365; phage(gi77747808)            1.60e-13            LactobacillusrhamnosusMVYRHTDVQLSFESFDCGLGTSLSPDNEWVKLASLIPWQKLDEAYQSVFNKSAGRAAKPFRELYGAELIKQRTHLSDAKLVEAIRDTPAFQYFMGRTRYEAKIPFNASTLTYFRRRASKISDLIRNIITDEVREKLEAIVPGAHVLITDATAVPIKIQFPQDASLLNKARLNLEEMVLKMAQGLQVAIPRTYKRLAKATWTEYSRHPGRQAKARRKQIKAQLQYIRRDLRYVDELLSQGGEAHLTEWQINRLAVVRKVYEQQRYMYDNKTHIVPDRIVSLSQPYIHPIVRGKAKARVEFGAKIDCSILDGVIDVERFDFESFNESTDLAATLDHCWDTLGQYPDEVLADTLYRTRANIALCKELGIKLSGPKLGRRPKHVDANQRKLDTDAENRRGAIERKFAFLKGSLGLDLVNTRTAESLVVEVDSAIVLANLMLLLGIFSIPISVITHRAGKTYQINYKVITERSKSAA
1806945..1806956                   attR                                                                                 N/A                 ACGGCTAAATGG

#### region 6 ####
1809440..1809455                   attL                                                                                 N/A                 AGAGTTTTTCACCATT
complement(1820495..1821250)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; AWJ15_08495; phage(gi48697274)     0.0                 LactobacillusrhamnosusMKQRILRIFAEFKQRYGVMKIHHELNLELQPLQLRCSPRRISWLMKELDIHSVTVNKWKAASASKTKVEQRPNLLKQDFSTTGLNQKWTADMTYIQTKRNGWCYLSTIMDLHSRRIIGYSFSKKMDTDLVLKTLESAVKNRTITGDLIIHTDLGSQYTSDDYNQRLTELHIRHSYSRKGCPYDNAPMESFHASLKKECVYPLPVFEDYETAAAVLFECVHAFYNRKRIHSSLGYQTPLQVEIATLTSQMAA
complement(1821391..1821642)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; AWJ15_08500; phage(gi48697273)     3.22e-53            LactobacillusrhamnosusMPTRYDKEFKQNIINLYKQGESAAQLAREYGIGYSTVHKWIQGQAKTQSGKSPDEIKAMEKRLASLSEENEILKKALGFLAQK
1821660..1821971                   transposase; AWJ15_08505                                                             N/A                 LactobacillusrhamnosusMRDDLFIIPSLKSCLRNQLTSTENRRGTIERRFAFMNGTLGLDLVNTRTAESLAVKIDVAIVLSNVLTLLRVFAIPILILAKFEGEAYQIRYKFTTSVEDMVA
1821983..1822489                   PROPHAGE_Staphy_N315: transposase; AWJ15_08510; phage(gi15927655)                    1.51e-23            LactobacillusrhamnosusLVKPKYSISNGLVEYALKLAMKSITSKSIASITGISTTTVGRILDDNINPRPLNYLPTNLCFDEFRSTHPQMAFICIDADTHKRVTVLGDRLSDTIKKFFEENYSIDERAKVKHICMDMNAAYQNFVHELFPNAEIVIDRFHIIQLLGRAMDQMRVQALRQIKDKHSRV
1822826..1823245                   PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; AWJ15_08515; phage(gi985761246)     1.19e-35            LactobacillusrhamnosusMYRAIDSNGLTLDFELRKHRDYAAAYHFLKRLLTTDGRPDRLVTDQYRATLKAVKHLMKQDYLSKSAHQCSKYRNNLIEQDHRFIKRHRVRSANFQNIRTASATLSGIEVIHALRKKTRRELSLIGFSAVDELKAMVPA
1823493..1823504                   attL                                                                                 N/A                 TTGGAAATTGCT
1823573..1823971                   RNA polymerase subunit sigma-70; AWJ15_08520                                         N/A                 LactobacillusrhamnosusMSSEQEVTRMFIRYVQQDLKNERINRYKASLRQIKEIPLEAWLLEEIEDSYHLDEFRLTDEEIEHLEDFIESEKLSRAVSTLSSTDKMVLYQYYYGELNDVEIGNRSGKTSQGVNKRRRRALARIKEAYENM
1823992..1824249                   hypothetical protein; AWJ15_08525                                                    N/A                 LactobacillusrhamnosusMHYTEVDNLIPVILAAQDGDAEAMSQLLDMFSYDFDREAAYGKSYIDPDLRQELQIKFVFSVQRFNVAEHLSQPSTQSSSQLTRT
1824599..1824871                   excisionase; AWJ15_08530                                                             N/A                 LactobacillusrhamnosusMSFVLSDGQIDTIRNKVFEIIREEVNSVRHEALLNVRYFKKGEACKYLNVSYNTLDVWIMLGLPKITIGNSVRFDRIELDKWMQGMSVGC
1824923..1826023                   PROPHAGE_Oceano_HTE831: integrase; AWJ15_08535; phage(gi23097608)                    5.82e-12            LactobacillusrhamnosusMSITKTKAGTYQVSVFYPKAVRELMGVAGQTRFRETISTKQAAVAKEREINKKIKEAQKNGNARSLELKGKILFKTFYKDVFMPLYLTGSTGRAPVVPTKATVEYQRGLFKNHLLPMFGSYSMTYLNSNKEFVVDRLKEKSEHFANIKTVKAYVRQMFEVAEILDYIEYDRVGKSLRLVGQPHKDKLKKERVKKGEFLTAEQLLDWLQATKEDYERGKLSLADYTLFLLTLHLGDRKSESYALQWKHIDLEAGKLYLVQSLDGNRDAKDTKGHKQSIMTLPQDILYLLADWKAEQAKQLEAIGVEQDGEQWLFTYVTREGIRNQPLYSDYLNARIKSVNRRHPELVYLHPHKMRHTFSTLVDTEYL
1826137..1827555                   PROPHAGE_Xantho_33913: IS1478 transposase; AWJ15_08540; phage(gi77747808)            7.97e-14            LactobacillusrhamnosusMVYRHTDVQLSFESFDCGLGTSLSPDNEWVKLASLIPWQKLDEAYQSVFNKSAGRAAKPFRELYGAELIKQRTHLSDAKLVEAIRDTPAFQYFMGRTRYEAKIPFNASTLTYFRRRASKISDLIRNIITDEVREKLEAIVPGAHVLITDATAVPIKIQFPQDASLLNKARLNLEEMVLKMAQGLQVAIPRTYKRLAKATWTEYSRHPGRQAKARRKQIKAQLQYIRRDLRYVDELLSQGGEAHLTEWQINRLAVVRKVYEQQRYMYDNKTHSVPDRIVSLSQPYIHPIVRGKAKARVEFGAKIDCSILDGVIDVERFDFESFNESTDLAATLDHCWDTLGQYPDEVLADTLYRTRANIALCKELGIKLSGPKLGRRPKHVDANQRKLDTDAENRRGAIERKFAFLKGSLGLDLVNTRTAESLVVEVDSAIVLANLMLLLGIFSIPISVITHRAGKTYQINYKVITERSKSAA
complement(1827888..1828139)       50S ribosomal protein L31; AWJ15_08545                                               N/A                 LactobacillusrhamnosusMKQGIHPDYHLVVFMDSATGFKFISGSTKTSKETIKWEDGKEYPLVRVEISSDSHPFYTGKQKFTQADGRVDRFNKKYGLTSK
complement(1828236..1829495)       UDP-N-acetylglucosamine 1-carboxyvinyltransferase; AWJ15_08550                       N/A                 LactobacillusrhamnosusMEKMLIHGGKKLSGEVVIGGAKNSTVALIPAAILSRTPVTLDSVPHIQDVYNLMAILSDMNVKSDFTENVLTIDPTEINDVPLPNGKIKSLRASYYFMGALLGRFGKAIVGLPGGDDIGPRPIDQHIKGFEALGASVSNEHGAMAIKAPAEGLHGARIFLDMVSVGATINVILAAVTAKGRTVIENAAKEPEIIDLATYLNNMGGKVRGAGTDVIRIDGVPTLEAHNSHTIIPDRIEAGTYLAMAAAVGEGVKVKNIISEHLDAFLAKLEEMGVVMDVGEDSIFVYPSGDLKMVQIKTMPYPGFATDLQQPITPLMLKAHGEGLIIDTIYPKRVRHIPELLRMGADITIENDVIILHHCDHLQGTEVAAEEIRAGACLMIAGLMAEGTTTITKVDNILRGYDRVVMKLRGLGADVELVD
complement(1829573..1829839)       ATP-dependent nuclease subunit B; AWJ15_08555                                        N/A                 LactobacillusrhamnosusMAKGASWLRPLMFWLTPITRSPAQGSACKDLERNGQTRAITFEAAYTPIPKRAGSRSLTFSPCFLRADSLNLYIECMAHGSWLAYQCS
complement(1829986..1831590)       CTP synthetase; AWJ15_08560                                                          N/A                 LactobacillusrhamnosusMTKYIFVTGGVVSSLGKGIVAASLGRLLKNRGLKITIQKFDPYINVDPGTMNPYQHGEVFVTDDGAETDLDLGHYERFIDINLNKYSNVTTGKIYSEVLQRERRGEYLGATVQVIPHITNMIKEKVMRAAKHSDSDVIITEIGGTVGDIESLPFLEAIRQMKRDVGSENVFYIHASLVPYLRAADEMKTKPTQHSVKELRSIGIQPNMLVVRTEKPITEEMKKKIALFTDVPENAVIESRDAKTLYSIPLALQAQKMDQIVVDHFGFDVPPADMTDWTKLEHKVQHLTHQTKIALVGKYVALKDAYISVAEALKHAGYYWDSDIDLQMFQAEDVNDDNVESLLQGFDGILVPGGFGDRGLEGKIAAIRYARENDIPFLGICLGMQMASIEFARNVLGLKDAGTTETHPDVKDPVIDLMRDQVGVKNLGGTLRLGLYPCVLKPGSVAAKAYDNAHEIEKRHRHRYEFNTKYRKPMEEKGLVFSGVSPDDRLMEIIEYPKNKFFVASQYHPEFQSRPNKPEGLFKAFIQSAGDFKN
1831731..1831758                   attL                                                                                 N/A                 AGCATTAATGAAAAAAAGTAAGTATCAA
1831853..1833310                   integrase; AWJ15_08565                                                               N/A                 LactobacillusrhamnosusMKKVVLTMREEERYRVIKAVVNGKISIQRAAVRLKRSERTIYRLIQLYKHQGKDGFIHGNAGREPANKRNAQLERQIIHLYTNKYAGFNIAHFHEFLTTDEQITISESSLRLLFRKKQILSPKAHKATKRRVKRELKAKEKKVELLSKRDEATLSAIEAVENIKAHPERPRKRYAGELVQMDASCEHWFGTQKAALHAAIDDQSGNVVGGYFAQQETLSGYYHVFAQILRNYGAPAEFLTDRRTVFNSNKKEGSPSTENPLTRFGYACQTLGTELLVTSVPQGKGRIERLLETFQDRLTSELRLHNVNTIADANRFLVGFIKRHNNRFASPIKSNMSVFEKQLTPKEIDNILIIANERSIGHGHCIRFENKRYLPHRNGELIYLPPHTKVLVIKSFTGKLYMTTDDDQVYDLFCVPREYGLSAKFDLTPPKHATPKKARKVPAITHPWRRANYRDYLDSLGLDSEQIKWLVNDRYPVRNSQTSHV
1833385..1833412                   attR                                                                                 N/A                 AGCATTAATGAAAAAAAGTAAGTATCAA
1841270..1841281                   attR                                                                                 N/A                 TTGGAAATTGCT
1843441..1843456                   attR                                                                                 N/A                 AGAGTTTTTCACCATT

#### region 7 ####
2155700..2155714                   attL                                                                                 N/A                 TGGGTGGTCAGGGGA
complement(2155812..2156969)       PROPHAGE_Oceano_HTE831: integrase; AWJ15_10105; phage(gi23097608)                    1.52e-67            LactobacillusrhamnosusMASIKKYATKDGKEFWRVQVFAGNDPQTGHKKYKVRRGFKTKKEATVAAARLELAISNGDLDNEKPKPVFFRDVYEEWYGNYINTVRESTWARTAGMFNNHILPAFGGKRIATITTKDVQKAVKRWFEFTSANYKRWYNYVSSVMDYAVRQGYMSKNPAKAVVLPHHDDLAGDKPENFWTKEQMNHFFACIDQENHFDVFIMFRVLAFTGVRRGELLALTWNDVSFKENSIKVNKTLTQGDKGHQIVQAPKTRAGRRTIPVDGQTMAYLKRWRRIQQETFLQLGINTMQPNQLLFTNTKNGYQSLNTPSKRLHKLQDDNGLTPRITIHGFRHSFISNLLIAGVPVTSVQKLVGHTDPTITLGVYAHVSAKQESEATAALAKYMQN
complement(2157087..2157698)       PHAGE_Lactoc_bIL311_NC_002670: repressor; AWJ15_10110; phage(gi13095660)             8.40e-15            LactobacillusrhamnosusMTKLLEPNSHLSLGERIKSIRISKGETMEEFALSVGLTSSGKSAVSRWERGLSAPSADTMKKIANHGGISVQFLVTGKPAFEDLPEDQQMELRKQRDELLHNLEVNSENLWTELFSDDYVKKLTWQEKTFLENSMRFVQLMKPERQNVAIMKFSSIVAGIIRARTHDYSADQIEEMKTDFAKELSDIIDISQKSPTQKIQDYE
2157813..2158025                   PHAGE_Lactoc_bIL311_NC_002670: ps3 protein 14-like transcriptional regulator; AWJ15_10115; phage(gi19343481)     4.02e-14            LactobacillusrhamnosusMQRIKGYRVMLNLSQQDVAKELGISRQSYWSKENGRTSFNDKEKTKIRDLFRKTGIPVTIDSLFFDGKVD
2158050..2158325                   hypothetical protein; AWJ15_10120                                                    N/A                 LactobacillusrhamnosusMALMKAQITLPADFDQILQERIHREVVRVMNETKQQPMQKKLNIGQAAAYAGVARNTLLSWTKKGLLVQVVGGVKRINTADIDDYMNNHGK
2158393..2158614                   hypothetical protein; AWJ15_10125                                                    N/A                 LactobacillusrhamnosusMNLFSKEDIALDHELGNLIDDIQLNVHAIAEDSTVTVDGKYIPNSELAVTTAKELLRVSEILKLYENEDDADD
2158725..2158916                   hypothetical protein; AWJ15_10130                                                    N/A                 LactobacillusrhamnosusMAKMINSKYGWTWPQFVKADADCDRYWQAQKAEKRSLIEATKKSPRVAPQGEKKTSEKIRILF
2158965..2159237                   hypothetical protein; AWJ15_10135                                                    N/A                 LactobacillusrhamnosusMKNVSNSTKVPDLDMASLNLSTAKGLLEALRDQLDSIEELVCYYRKNHTQTEALRLAYEANRSFYTWMALLRPIQDYVDSSLATIDEADK
2159234..2159422                   hypothetical protein; AWJ15_10140                                                    N/A                 LactobacillusrhamnosusMMTRPDIEATQDLLKEASSLLIVLRRELKDKSLEALTDATSDKIIDARRLLMEGDAADGRRA
2159406..2160233                   PHAGE_Lactoc_bIL310_NC_002669: hypothetical protein; AWJ15_10145; phage(gi13095885)     3.45e-25            LactobacillusrhamnosusMVDVLKVALGYQQHGFAVYPLAPGTRTPLKGSHGYKDATKDPEQAKKWWGEHPNYNIGLGLDGVLVFDIDVGHKSGTNGSDTLAKLCADGRAGQISSSYAEISPNGGLHIFFTYPKELKLTSRSDLFSKNGEKTGLDYIATGVPVFPSIRENGMYQPLKGHKITKLAPVPQWLLDEIQRVSHPNPGFGGSTVYRGKRWTGRLLDEIVNGTSTGNRNDFLTKIAGKMFFTGAEPQTVYNLLFTTNDNYLDTPLAEAEVNKIFKSVLKSEERRRAVG
2160226..2161650                   PHAGE_Staphy_StauST398_2_NC_021323: virulence-associated protein E; AWJ15_10150; phage(gi509139907)     4.23e-73            LactobacillusrhamnosusMVKAMPEDIKQEAKKVVNVDFTGQEQWRNDLKLDGNGGIRKDSVVNVQLLLDNDPAFANVVAWDDFSEMLIKTKGVKGLPIRKGFWTDEDDAVVRSYMERKHNLLFSKQNEQDAMVVVGKEHSINPVKDWIEAEQWDGTPRAERYFIDYLGAEDSEYTRAVTRKWLAGAVKRVYQPGCKFELVPILEGKQGLGKSTAARNLFPTKFSDSLKSMGKTDEDYKKLQGNWIMELGELSAMKKTEIESAKSFISAQSDSYRGSYSHYVYPHLRKCVFIGSTNQQDYLKDATGERRFFPIRCGVTKPTKTVWRNEESVPKINHDIHQTLAEVKTWVDAGESVFADDKLMQLAKPYQQEAETVDPMKEAIEDFLNMKVPSNWENLSLSLKASFFHTHIDHNGDVATWLQQHLDAGELQPLQQTTTREIMEVVFDKSVDRYLMGRTGSEAKRIKLIMDNMDGWDRERVRINGQRSRGYVRK
2161930..2162352                   PHAGE_Strept_315.2_NC_004585: hypothetical protein; AWJ15_10155; phage(gi28876240)     1.55e-21            LactobacillusrhamnosusMLYPESTWARFEQEFPIPEKYRKYYEYKNWHIEPKSPDFNPFKQDHPFAFMLMPEDMQNALYLWTKGLGKRKTINSEYTSYGIKHLFTDLPGGFYITNGMMKGALLAAGFEIADYAELNWHANISGRSIKEQIKLAPHIS
2162383..2162808                   PHAGE_Staphy_Pvl108_NC_008689: phage endonuclease; AWJ15_10160; phage(gi119443688)     4.88e-21            LactobacillusrhamnosusMQMSVPLHICMHPGCRRMIPFNQRFCEEHKQDKNKQATNQERMQYEEKELRFYKSTTWTKLSKSFRLRNPTCASCLKRGIIRQAVLVDHIEPIKTAYGWQHRLDESNLQSLCQACHNAKTSREVAQRRMRSPNRSTPARKF
2162933..2163403                   PHAGE_Staphy_phiPV83_NC_002486: phi PVL ORF 1 homologue; AWJ15_10165; phage(gi9635714)     3.76e-21            LactobacillusrhamnosusMGAPLKSVTNLSAHLSKKQLADRVASEKALFTYKELQVQPPTWLDDYAVTEWHRIVPLLKKDIPVSELDAALIASHCQAYSDIQKAAELIQEQGMMVETTDSVKANPAVKMKLDATNQMMRIDEVLGLSVYSREKLALKSETKKKPDDPFAELVSS
2163400..2165103                   PHAGE_Lactob_LF1_NC_019486: bacteriophage terminase large subunit; AWJ15_10170; phage(gi418489385)     4.40e-138           LactobacillusrhamnosusMNYATEYTDKVLSGEIVAGKKIKQAARRYRRDLRASKRKKNPWPYYFDEDFANKAVEFIELMPARDGSPLKLELFQKYLISEIFGWRDKETGNRRYDRAYISMARKNGKSFLMADLGALYLLMENKPAMNREIVYTANSNAQAHLAFDMLSSGLRQVSKMSKSVRDRLKINRNEIIDLPSNSRAVPLASDLHSLDGYQSDLAIIDEFALARTDEILRTLKSGQINSDNSLLAVISTTGPDLNGPMYKEYKFVSKILTGREQADRYFIAIFEQDSKDEAFAPETWEKSNPLLANAERAKTMRPSLQADVDLASKQGTLRPILVKNFNMWQSARADSYISLDDWEKATIEPPDTRDKDVYIGLDLSKSSDLTSISWLVPEDGYLYADSHSFVGTKYGLEEKIKRDGFDYISGASRGECSITKLDSGMIDYDEVLGFILDLIERNQWNVRAICYDPFAIGYLIPEFEKRNLPLFEVRQGVRTLSTPTTRFRDDLFNGQLKHPDNQLLAYAVNNAILKYDANNNPIIDKARNATKIDPVAALMNAYTIAMDQNKESEVADNDFYSSDDFGF
2165069..2165248                   hypothetical protein; AWJ15_10175                                                    N/A                 LactobacillusrhamnosusMTFIRAMTLVFNVQTVLLLLGLICMVVGIWWLFGFGVGMLAVGTALISVAVIINFNKGR
2165253..2166437                   PHAGE_Staphy_StB20_like_NC_028821: portal protein; AWJ15_10180; phage(gi971746491)     3.74e-73            LactobacillusrhamnosusMSFFTNDTTQPRDDNSDPFLDALVSMTSNDSGLYVGIGALRNSDVFTAVRVIASDLATNPIEYSDKRISVLLNKTPNGHMTAWAFKFALAANMLLNGNSFARVTKNPSGQVTGFELVPNSQMVVKQDDTTGIISYEYTPDSGRSQRLNASEVLHFKCFTQDGYKGISPLYSLHDEVGVQKSGHALLKGFFNSGVQGTGILKVNKTQLDTKAKENIRNKFEAANSGDNALKTIILDNDMDYKQLEVNTDVLNLVNSSDWTTKQIAKAFGLPLDRLGIESEHSNAVQSNVMYLQNTLIQYFTCFTSEMDAKLSTGDNRFSFNTDKLFSADPATMQELAVKGLQGGVLTTNEARAKLNLPPITGGDDIMASLNYTPLNNLTNYQNTRQRSDPENESR
2166424..2167938                   PHAGE_Entero_IME_EFm1_NC_024356: capsid protein; AWJ15_10185; phage(gi658310465)     5.49e-49            LactobacillusrhamnosusMNQDDVEKRLNPDADLTAADATKTDDDQDKAKTGPKKLSGYAVVFNSPSKDLGGFKEVVDPHAFDDVDLSDVYMVSNHDFSQVLASTKAGTLTLNVDDKGLQFEATLPDTTTANDAYNNVQAGNLSAMSFTFNAAPDGDTFTKDDSGQVIRTIKQVKSLFDVSLVAIPAYDDTNVQVDKRSYTEWLKTNTEQPEKGDKTMTEKTIIDNKEHTESRAYEDYIRSMGEQRDGLTTTTAGAVVPKEVINDVFDLKESDYDLAKYVTVKQVGTPVGTYPIALTNNGVLATKAELADIPDIDSNLFRGVDYKVATRAGKIYLSNELVEDSEVDIVAEVKNQLKKLVQNTDNSNIISVLTGKTGTNDNFKHITGTGLDDLKQTFNVELDPALSLSVIVNQDAFNYLDTLKDSEGRYLLQPSITAPSGKQLFGAPVIVIANKVLPTDKAGTYRIIIGDFSQAIFLAQKNEVNTQWERFDSYSQGLAVVIRNDYEVVDPDAARIVDITPVKA
2168001..2168291                   PHAGE_Entero_EFAP_1_NC_012419: head-tail joining protein; AWJ15_10190; phage(gi225626391)     2.19e-11            LactobacillusrhamnosusMSVTTEDLKKALRISHSEDDAMLSAYLLTAKQFVISAVDQTLTDENFGDDPRFDFAVSLLAQHWYINRGVDGATYVPDSVVSMIQQLRGVDYATGN
2168275..2168616                   PHAGE_Lactob_A2_NC_004112: putative head-tail joining protein; AWJ15_10195; phage(gi22296529)     3.29e-18            LactobacillusrhamnosusMPLVTSISQLNELITLVSYTMGNVNGVPVSNVRKEHFTTWALVLSQYLSEVRASVGTKLEDTVTFVVRYDQPETILNSWRIEWQGKQYDIVKLTPDTAKKQWTTIIGKPVANK
complement(2169195..2169443)       hypothetical protein; AWJ15_10200                                                    N/A                 LactobacillusrhamnosusMHFLWALIVGAIIGAIAGAITSKGKSMGWFANIIAGLVGSAIGEGLLGHWGPQLAGMALIPSIIGAIIVVAVVSFFVGRSKD
complement(2169693..2169765)       tRNA                                                                                 N/A                 GGGTGGTTAGCTCAGCTGGCAGAGCAACGGACTCTTAATCCGTGGGTCCAGGGTTCGATCCCCTGACCACCCA
2169693..2169707                   attR                                                                                 N/A                 TGGGTGGTCAGGGGA
complement(2169971..2170891)       PHAGE_Cronob_vB_CsaP_GAP52_NC_019402: putative ribose-phosphate pyrophosphokinase; AWJ15_10210; phage(gi414087562)     2.60e-20            LactobacillusrhamnosusMHELKLFSLNGNRPLAEKIAAEVGLPLSPARVNHFADGEVQIELPESVRGADVYVIQSVSDPVNENFMELMIMVDALRRASAHHINVVISYYGYARADRKARSREPITAKLVANMLEMDGVDRIVAVELHADQIQGFFDIPVDHLKAHRLIGDYFRKLNLGDNVVVIAPDHSGTKQARALAEELHTPIAIVDKRDQEHIGVIGNVEGMHAIVIDDLIDTGDRIVDSYKALSAAGALDVYAAATHGVFSRGAVDRIKHLGLKKVVITDTIQLDPKHQFEGLDQISVGPMLGKAIKLINSNQSIHVLF

#### region 8 ####
3027724..3027735                   attL                                                                                 N/A                 GATATTGTGCAT
complement(3041737..3042864)       PHAGE_Lactob_Lrm1_NC_011104: integrase; AWJ15_14325; phage(gi195661224)              0.0                 LactobacillusrhamnosusMASISKRGKKWQYRVSYKDNDGTRKYVNKGGFPSKKAADIAATEVERQHNRGANLDLNKITLIDYWDKWIELYKSGKHSRITEARYKTIRKQLLAYWGESRELKSISKSDWQAFINEFGKKRAKDTVSKLNGYVRSMADSAVDDQIIYTNFTHNVVLTGNEGQAGIIKYLQVKDLRKLVNYCLEFADYKHIAYYIIATGALTGARYSEVLGLTWDHVDLKKRVVHITRTWDHRYGSGFAATKNKSSVRDIDITRELADLLLRLKKEQQEIYLAQGYRDSKQLLFRSIRHNMLSSTAINKDLRTIEKALDISPAITFHGLRHTHVSYLIANHVDINYISKRLGHANTMITQKVYAHLLEDQRKEQVSQTLQALSRL
complement(3042972..3043235)       PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; AWJ15_14330; phage(gi195661240)     3.67e-13            LactobacillusrhamnosusMKTITVISYKFGEKSWKNFEGEPIKKYEHSVLLDISNTEVFSDKEKAELNYKIVVPFSRIREKRLIKDIPLSNVNEALNKKKASRRK
complement(3043333..3043590)       hypothetical protein; AWJ15_14335                                                    N/A                 LactobacillusrhamnosusMTNENTVTQDQLKFAEQDANHKLDIINIKIDALTKSVNAISIKADGLDELKTTTAVLSEKESTTRALAWAIVVAIVGGLIKLILF
3043752..3045170                   PROPHAGE_Xantho_33913: IS1478 transposase; AWJ15_14340; phage(gi77747808)            7.97e-14            LactobacillusrhamnosusMVYRHTDVQLSFESFDCGLGTSLSPDNEWVKLASLIPWQKLDEAYQSVFNKSAGRAAKPFRELYGAELIKQRTHLSDAKLVEAIRDTPAFQYFMGRTRYEAKIPFNASTLTYFRRRASKISDLIRNIITDEVREKLEAIVPGAHVLITDATAVPIKIQFPQDASLLNKARLNLEEMVLKMAQGLQVAIPRTYKRLAKATWTEYSRHPGRQAKARRKQIKAQLQYIRRDLRYVDELLSQGGEAHLTEWQINRLAVVRKVYEQQRYMYDNKTHSVPDRIVSLSQPYIHPIVRGKAKARVEFGAKIDCSILDGVIDVERFDFESFNESTDLAATLDHCWDTLGQYPDEVLADTLYRTRANIALCKELGIKLSGPKLGRRPKHVDANQRKLDTDAENRRGAIERKFAFLKGSLGLDLVNTRTAESLVVEVDSAIVLANLMLLLGIFSIPISVITHRAGKTYQINYKVITERSKSAA
complement(3045366..3046043)       PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; AWJ15_14345; phage(gi195661225)     3.99e-157           LactobacillusrhamnosusMKLLILIAFLGSLLLAAIFGTLSIVQRKDSRKLKRNLIITALSAIAFIAIFFWIGTYSGESNRSAASSSSSKAESSKVESSQDDDDSYEDTDSDDSDDEESSSTETFNAADYNTGITYEQLARTPDDYKGKNITLTGKVIQVVEGDDETDLRVAVDGNYDNVIMVGYDPDIMNGSRILENDKITFYAESLGTTTYKSTMGGKITVPLALAKKIDDAGTAPDDYGD
complement(3046105..3046752)       PHAGE_Lactob_Lrm1_NC_011104: CI-like repressor; AWJ15_14350; phage(gi195661226)      2.26e-50            LactobacillusrhamnosusMNTGDTIKKLRKTRGMTQSDLANRLGVAPTTVSSWERGAAYPLMTTAKSIADIFGVPVSVIAGEKEISNIAPSMPVHSYKYLDAGVSCGAPELVEAYTKDNLEEIQLSDAIMGRYAGDDDILIIHANGESMNRVFPDGALLAVKRTDDLSNGDIVVFSIDNEDFSCKRYYKNDEAKVVSFQPDSDDPRFEPYVYRYEDADNVAIFGKVVVYTVVL
3046901..3047167                   PHAGE_Staphy_phiRS7_NC_022914: transcription regulator; AWJ15_14355; phage(gi560185989)     7.84e-08            LactobacillusrhamnosusMTGIEPAFTLEGARNNLHFSQKEVAEALGMSTKTYADYEKYRKVLRTDKAFEFAKLVKLPFDSIIFLPKDYETFVVGKKYLLTKGETV
3047164..3047349                   PHAGE_Lactob_phiAT3_NC_005893: putative antirepressor protein; AWJ15_14360; phage(gi48697283)     1.31e-35            LactobacillusrhamnosusMNELQLFQFEDNQIRTVSSNGIIWFSAPDVTNALKLTNTTVALKSLDGDEVTKFNLGGLSC
3047544..3048284                   PHAGE_Lactob_Lrm1_NC_011104: antirepressor; AWJ15_14365; phage(gi195661228)          9.37e-148           LactobacillusrhamnosusMNELIIMHDRQAVTTSLKVAESFGKNHRDVLAAIRDLMSSAENYAVLKKYFIDGSYTASNGKTNPMYYMNRDGFTLLAVGFTGKRALQFKIQYIQAFNSMETQIRTGYAIPGSYAEALKLAANQAEKIEQQKQTIAIQAPKALFADAVATSHTSILIGDLAKLIRQNGVDIGQNRLFAWLRDHGYLISKGDRRNMPTQRAMDLELFDIKERTFQNPDGSVRITKTTKVTGKGQQYFINKFLQKEAV
3048285..3048545                   hypothetical protein; AWJ15_14370                                                    N/A                 LactobacillusrhamnosusMKAEQEKQSLSQVCLNLKILKAEKLASYCEKLIEQHKKGTYDDAISDLEKQRRDHRYLNGFSDDDQVFQQAIDRIIKVALSQRIAN
complement(3048538..3048843)       hypothetical protein; AWJ15_14375                                                    N/A                 LactobacillusrhamnosusMKNATLLFADGSRLELHEGEKLSGVSFSENATHPRNKDQEYEKLIYPELALEGVVLKLWSHPEVGLAESVFEVLHNYEWFRPYHESGHYYHSSAVISATFS
3048918..3049274                   PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; AWJ15_14380; phage(gi195661230)     7.03e-84            LactobacillusrhamnosusMELLQIVENKQISSKKYLAVDAEEQAKLIKENQELKRQLEGMEYWDLTTAASLIKGHNNTWVVNNILDVPRFRKVLEDRIVHYPPPGQKGYMFHAGPWRTFIDKWFPEISRSLREKGK
3049516..3049719                   PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; AWJ15_14385; phage(gi195661232)     5.36e-35            LactobacillusrhamnosusMTNEVYERILAAANRQIAAYHKVAYDYGPDNTDFHQTYAMGQEDGAHAILFIIKQAIKKAAGMHTND
3049738..3050223                   PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; AWJ15_14390; phage(gi195661233)     7.30e-113           LactobacillusrhamnosusMSVLYDLTDKLTSLQRLAESGKADPKAIADTMEMVDGDFDDKAVGYVKVYKSIEADVKEIDAEIRRLQERKTSAKKNAATIKSRLAQAMVETGREHIHTPLFSIYTRRTVSVEAPEDPNKLPPEFIKTTLMVNKADLKKALQAGREVPNARLVENIGLGVR
3050224..3050931                   PHAGE_Lactob_Lrm1_NC_011104: NTP-binding protein; AWJ15_14395; phage(gi195661234)     5.19e-168           LactobacillusrhamnosusMQPIKHASSIDRTNNWRVLIYGKPGVGKTSAIRNLNGKTLVLDLDDSSKVLSGAPNIDVQPFDRSKPSEEWKEFLKNLAERVSGYDNLVIDNVSAFEKDWFVEMGRHSKNGIGNELQDYSRWTNYFARIMTMIFMDAPVNVLVTAWENTRDVTSETGQSFSQYAPAIRDSVRDGLLGLTDVVGRVVVNPKTDGRGVILEGTDAIFAKNRLDNRKLVPINELFKFGNQEKSVKQED
3050935..3051492                   PHAGE_Lactob_Lrm1_NC_011104: SSB protein; AWJ15_14400; phage(gi195661235)            9.11e-130           LactobacillusrhamnosusMAITMDYSQAAEGNGDIQDGVYECVINRFGFDNYKDREFIKFDLIVRNDVPQKYQNKHIFDNQYPKKDTGEYAMGYLFMIGKNAGIPDHKKWADLAAMLADFTGHAVKVTVKNEEYNGKTYPHIKKWEPTDFPQIQHRWKDSKAASVSNSNPSFGTQAQANQTNAADPFANNGQPIDISDDDLPF
3051509..3052336                   PHAGE_Lactob_PL_1_NC_022757: hypothetical protein; AWJ15_14405; phage(gi557308027)     3.20e-147           LactobacillusrhamnosusMNESPSYYAIIPAGVRYDKQLPQGAKLLYSEITALSSKSGYCWASNDYFAKLYSVSNSTIQSWLKSLEDKSYISRVIKYKSGSKEVEQRFISLNPHPENCTTPPRKLGDPHPENWQENNTSINKNIRASSTLESDFEKLWKLYPKKIGKKPALAAYKRVMSRKKNPATNRQIQDGIVAYRQLINSKGTEKRFVKDGSTFFNQEAWNDYLEVVKEERDEQEARKPKFDPKKTAIAMYIDYNSLDRVLEEIKAQGIPINPEDAKRYIAEYDERRQNA
3052333..3053595                   PHAGE_Lactob_Lc_Nu_NC_007501: putative DnaB-like helicase; AWJ15_14410; phage(gi78000024)     0.0                 LactobacillusrhamnosusMTKKLYDPSNPEPHVMYGLYTKPELIKSEWIDPKWFNSQQYAAVVAYMNKLPGDVDTLELQDGFATAHPGVMSAADWQYILTSDFGTSRFDWWVGKLKRDYFRSQLIKAAQAYSEEPSEDNLTAMMEASQNATAASQTVTESSIADLAAAMEDKMLHGATDNGIKTYFTLNNILGGGLMPGRLLTIGARPGVGKSAFAINLIIEALKQQPELTVDMFSLEMSNAENYNRLLACKTGISAGKFINPQKSLSDAEKVEVEKAGNVLKDYHLQLYDKQVELPQIVKTMRQRAADADKGYLAIVDYLGLIGVRGQPDRRLQIEEITRQFKVLTNELSIPIVLLSQLSRAIENRQDKQPVLSDLRESGSIEQDSNAVGFLWNSDRSNAQSDVRTVTLTIAKNREGALGSIDFNFFAPKLQFKVAY
3053597..3053941                   PHAGE_Lactob_Lc_Nu_NC_007501: hypothetical protein; AWJ15_14415; phage(gi78000009)     1.13e-77            LactobacillusrhamnosusMAYPTMTLKEFNAYMQEGHYQYSLFVILQLDEATEYLKKAQQADTGMKKFWHKWAYVTLVDALETAESEYYGETSAYLPTKETDPVTRAYCQNTYDIWRGYLQNLNVSLPEQKF
3053983..3054384                   PHAGE_Lactob_Lc_Nu_NC_007501: putative Holliday junction resolvase; AWJ15_14420; phage(gi78000012)     7.08e-66            LactobacillusrhamnosusMIRLTIPGNPVPQGRPRFTRMGRAYDPTKSRNYKQHVKNVASELNIEPLSGPIRVAMEIYRPLQKSGSKALIRRKKDGKVRPTVKPDVDNYYKSVSDALTGILWEDDNQIVEIHVGKWYSDHPRIEIEVEEID
3054400..3054882                   PHAGE_Lister_A006_NC_009815: gp22; AWJ15_14425; phage(gi157325437)                   9.76e-33            LactobacillusrhamnosusMTRKRIDLTGQRFGRLVAIKDAGYTKNRSRVWECKCDCGNTAFVKAGHLKNGNVKSCGCLLAESYRKNLKKAHKWNQIHDFKEHTSLVSLTQGPHKSNISGVTGVQWDKSRKKWVATLWLKGVRVLYSRFAKKEDAIRARREAEEKYFKPILEKYHRDKE
3054897..3055082                   PHAGE_Lactob_phiAT3_NC_005893: hypothetical protein; AWJ15_14430; phage(gi48697296)     4.72e-37            LactobacillusrhamnosusMYVVAGLNTGTEYYRAKYQSQCIRWINENMAKHKKARNTRGDDIKVDMPEPLIIKKVEDEK
3055079..3055363                   PHAGE_Geobac_E3_NC_029073: hypothetical protein; AWJ15_14435; phage(gi985758339)     3.90e-06            LactobacillusrhamnosusMKTPRSEQETILSYDRELDQWHYYSDIPKHNRKWRDLVSETHTETSENGDITVLEGTINGSVSIRKHTVMSEETRAKAAARLKAYRDKKEEDEK
3055360..3055923                   PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; AWJ15_14440; phage(gi195661244)     3.51e-43            LactobacillusrhamnosusMSEEKLYAVKNDEGKYWDFGETNGFFSFSNVDVPVTLDKDLATEVAINSGGHVVTFVDEPEKVVLSEKQAKIVEKARVSDIPATYISACTNNGEEILLMNAYVNGWTVEKPKRYVLPMSGTDYHNYQMHGNAQYYAVKVTGNWRPDGIALGTDDAVKHGYTVTQSDIDTAPDWVKAIKPLEVNDDDD
3055913..3056092                   hypothetical protein; AWJ15_14445                                                    N/A                 LactobacillusrhamnosusMTTKADIDAAQKAIDAANNAINKLDLCGLYDCAWQANNNYKRIIDYNKEQLEVTDDEND
3056079..3056297                   hypothetical protein; AWJ15_14450                                                    N/A                 LactobacillusrhamnosusMKMIKLESGKLLNLSAVSYISNTEKVAYFKQPVIKNENNFQTAKCFGVGVTKADIERITASAANREASDDEQ
3056287..3056595                   PHAGE_Lactob_Lb338_1_NC_012530: hypothetical protein; AWJ15_14455; phage(gi226377668)     1.61e-51            LactobacillusrhamnosusMSNETKRDVNVLPEETEQQKNCPYCHETDPQSKHAHYGKAISDKTEYFDVRKTKLCRRVKARIKSPENKHPKLCVTQMNRFGEVSVVLDMAINYCPICRRKL
3056652..3057011                   PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; AWJ15_14460; phage(gi195661247)     1.47e-11            LactobacillusrhamnosusMALDGEGIGDELTNEDKQAYLKDYDNALPDETDKQKNCPYCHEIDPQSKYAHYGKAMSDKTEYFDFVRKTKLYRRVKARIKSPENQHPKLCVTQMNRFREVSVVLDKEISYCPICGRKL
3056984..3057364                   PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; AWJ15_14465; phage(gi195661247)     1.86e-23            LactobacillusrhamnosusMPNLREEIMTETKRDVVEAILLAKDTDTIWDSSTVRYYLNRYDAALPDDLPVIPKSISEYIKNLHKFHRDLVDVFGMVRDLGITRTEPTGVLVWVTHNIDTFARAWLLEAWIVEETGEIVKAEAEK
3057361..3057780                   PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; AWJ15_14470; phage(gi195661248)     6.24e-46            LactobacillusrhamnosusMKREIKFRAWNKKDKVMVDVAATNFGPSGCWSLIEDAYDAELQLADSYDLMQYTGLHDKNGREVYEGDILKVTSEDGESYVATVKWFGDEGYPAFDLAGIPAAWCYESNALATIFESGVETCEVIGNIFEDKQLLEGKQ
3057777..3057962                   PHAGE_Lactob_CL2_NC_028835: hypothetical protein; AWJ15_14475; phage(gi971748063)     1.21e-21            LactobacillusrhamnosusMKYGPYRFMSWIGFTLSLTSSFLPAKYMNFGAYKTFTGLTLLAVLFALWDISDAIREGKHE
3057955..3058173                   PHAGE_Lactob_PL_1_NC_022757: hypothetical protein; AWJ15_14480; phage(gi557308036)     6.05e-39            LactobacillusrhamnosusMSKSKDVDAYLQGELCAKAELATKLLHDIAWSKTTDAMTARVDPIYKQAIELSYWLLSSDDWYTENEDGGE
3058175..3058393                   PHAGE_Lactob_iLp1308_NC_028911: transcriptional regulator; AWJ15_14485; phage(gi971754961)     2.66e-33            LactobacillusrhamnosusMDSKQALAKNIRDNIYELGKTQSEYAKEIGIPINTLEYAISGRGSISLNTLDKIADGAGLDSWELIRPPEGK
3058746..3059189                   PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; AWJ15_14490; phage(gi195661249)     2.71e-75            LactobacillusrhamnosusMVRATRYFSPIDHDKTIENAKEVLGNYWHHKRLAQRTKIALRSPVMDGMPKSPSYGNKAEDKLVSHADELYYIACCEGAIESIENEDYRIILVESYLTPKTTRKSSLQLAAHLHVDRTTLWRQTQEALYAFAEICPLVKLVATSVQQ
3059477..3060337                   hypothetical protein; AWJ15_14495                                                    N/A                 LactobacillusrhamnosusMDKKAEIRAMIEHPEYLLHAEKMSLDKRIEQKKLDSKDVRSAVVDTAKSKGKQLAVDVLNGKWGDLILDLVDTGDHLKDRLDDMKKTLLLAEYLQKTDDQEQGLHRLSSLLTNPYGLSIYSKIVSLLSDAPSDDDMLDIMSDYLGNLANEKDWGSTFSKNKSILNLIDRSSPLALTLLRNSDHWPLVPGPKAFIAVDGRVQGDNTGWVATAFSKVPVFSNIEKTSIQMAIVDLESNKLAEFISGTLNPPYANPNNPSELIYAERPTDAGNMLKAAVSKSSATNQES
complement(3060588..3060806)       PHAGE_Lactob_LF1_NC_019486: hypothetical protein; AWJ15_14500; phage(gi418489439)     1.16e-12            LactobacillusrhamnosusMSLDGKVDSTKDKISGKAKEVEGKVTGDKARETQGKAEGILGKAKEKLDDAKDAVKDTVDDVKNKLSTDKKD
3060906..3061232                   hypothetical protein; AWJ15_14505                                                    N/A                 LactobacillusrhamnosusMKYLCEQQRLTWRRKATAHGYIIAHPVYKDTKKALGWGTESLKKGYYKGVKMSICWEQFNSNSSKFFKQQKSSRAESESLRNKNEKSTMVTCGSRLLYFRRRVDAMDR
3061216..3062364                   PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; AWJ15_14510; phage(gi195661250)     0.0                 LactobacillusrhamnosusMQWTDEQISGIRKLASEGFTRRETADKLGISYDALQGKARRLGIEFQKPVKNEYDSDGTQSSETILKVVRGHKMTPREVLEAHGYDYTKWELVRATSNFWKQTPEATLYQSKIQIRPLVEAEQYESLMNDIITHKEPYQAKAPIFVESDRYLVIPAFDTHFNGHTFDIYAESLKRQLEIIQRGHYAKILLILGGDLAHVDNINSTTAKGTQLETTDLGETVNEMEQYFETLIEAIIKNANECEVMYAPGNHDPSVGYMFARLLKRAYSNQPNITWDISLKHYKGTMLGHNFIGATHGDKGKNNYLAKFLDAYGFMLGTAQNRELFTGHMHSEMSRDLGGFIQRQVSTRKPTDRWTDDLGVVSHKTFELVEYSDHNTTAVYYV
3062377..3062907                   PHAGE_Lactob_Lrm1_NC_011104: endonuclease; AWJ15_14515; phage(gi195661251)           9.69e-65            LactobacillusrhamnosusMSDKEIWKNIVGYEGLYQVSSLGRVKSLERIDSNGHPVKERVLTSFPNRSGYCKVNLYRDRNMEVKSVHRLVAETFIPNPDNLPQVNHKDEDKGNNLVENLEWCTASYNTNYGTRNERAAKANEQAIYVITDSGHRYYFDSARKAAEIIGLKVCSVSDCLHGRQKTHRGFSFELAV
3062911..3063234                   PHAGE_Lactob_PL_1_NC_022757: hypothetical protein; AWJ15_14520; phage(gi557308046)     7.64e-62            LactobacillusrhamnosusMSGMKRVSYGYVSRTEQAIIEELSREEKRMQAIIYTKPHCQKCRHTLAKLSRVMPVSTITADADDYERFRKLGYQSLPVVTVYKANGTHETWCDLRVDKIKQYTEAI
3063437..3064231                   PHAGE_Lactob_Lrm1_NC_011104: small terminase subunit; AWJ15_14525; phage(gi195661254)     0.0                 LactobacillusrhamnosusMPSKKLTFINGRPQLVDANARVRSEADRQYNRVRNEQQSDYLKFYHSNEWKQLREQILIRDNSLCQRCGMQASLVDHIVPSEDDWEDRTNADNLQALCRDCHYWKTRRETTKRKKGQHRAMKITVIVGYPASGKSTYVKRHQGQHDLVYDYDHLMTALTGLPLHQGNIDANDYVQLIYELILRKLKAEQTFDHVWLVMTYPDEKLDSLLASRDVEHILIDTDRDTCMQRLSKQGRDVSQLIKVMNKLDEMKSENKFAKFKKIKN
3064432..3064887                   PHAGE_Lactob_Lrm1_NC_011104: terminase subunit; AWJ15_14530; phage(gi195661201)      3.78e-107           LactobacillusrhamnosusMAGKYKVLQMSKGDLTKERQEAKLHAELMAKDGIPKLQVTPPNHLDPVAKQEYKRIIESLGTLPLRNLDRAELENYCTWYSVYKNTSVNMKLALKNGDQDEYYAYISTLNKATASIKSLASDLGLNVNSRMQMNMPKTEAQKNDSIIDTFG
3064909..3066621                   PHAGE_Lactob_Lrm1_NC_011104: large terminase subunit; AWJ15_14535; phage(gi195661202)     0.0                 LactobacillusrhamnosusMSKFKDPMPNFIKRVLDGRLITSKAVNLAVKRHQEDLKRTDWRWRYDPNLAGKAVKFMEILPEPKSGKPQPLAPFQKFIIGSIYGWVDKDDSNIRRFTDVFISMARKNGKSLLISGVILYEFLFGKNPANKRQLYTAANDRKQAGIVFGMVKDRLRALMRKDPGIKRMVKITRDELVNLDDGSTIRSFSRDTGLVDGYEPHVAVVDEYANAKTTDMIETLASGQVLLPSYLTFIISTAGFDMNVPMFKQNYPYAKKVLSGEETAERYFAFIAEQDNVQEVDDPNSWIKSNPLLDVDIVHDQITDYLTTKLSQARGDGSLNAKLVKNFNIWRQATEDSYLDFDAWKDAELSEKPDIRGKRAWIGIDVGRTSDLFAITWLIPQEGWWWLDGYAFVASKGGIDNKIKTDRIDYLAAEQHGEGEISSLESGIIDNDRVYEWLEDFIERNDLDIQGIMYDPYQFGPMLTAIEKNHPEWPMVQVRQGTLTLSMPTKQFRDDVIGGRIKHSDNRIMQAAAMNAVLMSDNNGVRINKNKYANKIDMIDATLDAYAIAFKEDLDNYLDDERVFSDDFGF
3065794..3065805                   attR                                                                                 N/A                 GATATTGTGCAT
3066633..3066824                   PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; AWJ15_14540; phage(gi195661203)     9.65e-26            LactobacillusrhamnosusMNGKLANFFRILGANMAGIATVLGFILAGYGAFLINRPTGFMVCGGLLFVLAFILLLPDNEGR
3066829..3068082                   PHAGE_Lactob_Lrm1_NC_011104: portal protein; AWJ15_14545; phage(gi195661204)         0.0                 LactobacillusrhamnosusMKLFRGLATEADPHWADNLLDSGVIPSFRGAYLGISALRNSDVLTAVSIVAGDVSRFPLVITDSSTDEVIDLSDIDYLMNTKVNKRLSAYQWKFSMMVNAILTGNAYSRIVRDPITNEPAMFEFYAPSQTQVDTSDPENLVYRFTPYNASVQKVCSFEDVIHWKFFSYDTIMGRSPLLSLGDEIGLQESGVSTLQKFFKSGLKGSIIKAKESRLSAEARQKIREDFERAQAGADAGSPIIVDATMDYQPLEVDTNVLNLINSNNYSTAQIAKALRVPAYRLAQNSPNQSVKQLADDYIRNDLPFYFEPITSEFELKLLDDAQRHQYCIGFDTKSVNGLPIADVNTAVNGGLWTGNEGRAELGKKPLKDPNMDRIQSTLNTVFLDQKEAYQAEHTSQLKGGDANDKGTANDSDTHANS
