gi|00000000|ref|CP014251.1|  Listeria monocytogenes strain CFSAN010068 plasmid pCFSAN010068_01, 55521, gc%: 36.70%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
26902..27285                       PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; CG42_15000; phage(gi985761236)     4.50e-53            MNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKLLYQIWKKKNRQSFYSWKMDETYIKIKGRWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRFCCKVSPQI
27334..28014                       PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; CG42_15005; phage(gi985761246)     1.87e-91            MNHFKGKQFQKDVIIVAVGYYLRYNLSYRDVQEILYNRGINVSHTTVYRWVQEYGKLLYNIWKRKNKQSIYSWKMDETYIKIKGKWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPRVLVTDKAPSIASAFKKLQAHGFYQRTEHRTVKYLNNLIEQDHRPIKRRNKFYRSLRTASTTIKGMEAIRGLYKKNRKEGTLFGFSVCTEMKILLGIPA
complement(28036..29520)           PHAGE_Pseudo_PH1_NC_031908: hypothetical protein; CG42_15010; phage(gi100006)        3.84e-08            MKNFNNIDERVVDDLKKELKAQSKLKIAAASFSIYAYEELKKELEKVDQIQFLFTSDLFTKEKAPKEKREFFIPRLNRESQLYGNEFELRMRNELSQKAIAKEAAEWIRQKVTFKSNISGQRSDNFMVVENKGNINVYAPFDEFTTAEIGTTKGEKLFYNISKFENENTQQFLNAFEQVWHNQDYVDEVTNTVLDNITAAYQENAPEFIYYIALYNLFGEFLSDLDQDYIPDERTGFKDSKIWSLLYDFQKDAVLGSISKLEKHNGVILADSVGLGKTFSAIGVIKYYESRNKNVLVLVPKRLKDNWNNYKNNYKNNPLAEDRLRYDVLFHTDMDRERGESNGIDLGKINWGNYDLVVIDESHNFRNGEGTTHKKEEGVENRYQKLMRKIIKLGVKTKVLMLSATPVNTDFSDLRNQLMLASEGDSSNLTKTLTTKKTVTEIFGQAQRAFKDWSSLETENRTTEYLLDMLDFDFFELLDSVTISGSVAKFQNEQY
29551..29563                       attL                                                                                 N/A                 TTTCCTTACTTAC
complement(29556..29831)           plasmid replication protein; CG42_15015                                              N/A                 MSTFLVYIQIKNYENQANNLIEVQKQTQNLLDQQQRLALQDKKLLEEYKAEIKELKSLTTQSTPATLSKDVNQPKDIEIDKKKRRWWPFGK
29889..30182                       PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; CG42_15020; phage(gi48697273)     1.60e-12            MTKARKTTRSFDEDFKKSIVKLYESGKSQNALAKEYGIALSSIARWVKQFSEVKIDDDTILTAQQVKKLQKRNAQLEEENLILKKAIAIFTPHSNND
30194..31081                       PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; CG42_15025; phage(gi48697274)     6.14e-53            MLQHEHTIVRLCRALQVNRSTYYKFIQRQPSKRKQENQQLKKWILEIYSQAKKRFGAAKIQVVLKRDYGVSISLGRVYRLLRQLQLPKMSTVKPSYQKRKVDEAPHDSCPNHLKQAFNPPAPNQVWTTDFSYIPVGKKGFVYLCIVMNLFSRKIIAWQVAHKINTDLALQTLEVAYKQRRPSQTVMIHSDRGSQYTAKAYRRWLDEHDLLASYSKKAYPWDNAVTEAFFKYMKKEELDRRAFSSIQDVQLACFEYIESFYNRHRPHSTINMLTPEEKENFLFQQSVNDSFLCLLY
complement(31645..32634)           hypothetical protein; CG42_15030                                                     N/A                 MRTVEDILYDKQSAIFLLAELYETHEKEHEDHKEGTLITCEICRQIETCSILIRRLEQELLQKKDEIRAEEKRHAKDLLKWHYIKYPLNATNLERILHWQKMFSKRMFDELTRMGWSVEEIQRRYDIPDFFFKRWLFKKGLYAVVPLILRVRTIDDRIFIYKVFQEADLNLLLTLDDIVMKSYDRIEREDWKHVYFWHHGAYHHLEQIIVQSEFGKVGETVYHAEEQLGCKKKATDQVIFYDGFNQEAVAFFCEENEMKRLVKGNRLLINTRYGTITLFPGEYVVKEITGRFVKYSANQFSQLYEILDTIRPMGLVSETSSYNEYTNKI
complement(32641..32901)           transcriptional regulator; CG42_15035                                                N/A                 MRLYEEPDVRIRINIKGICEKYKLTMGELSRRTDIEPSKISAYANDRRQRVQITHLERICQSLHIRDMNELFILEVLEDEQVDNKE
complement(33011..33580)           hypothetical protein; CG42_15040                                                     N/A                 MDKRVLQGMNDKPYKYQVVRLKKEFFQSNPHFINMLDPGNPEKQMRRTYLYLDIQKDHYHYLIPFRSHLNHRNGVATPSKDRPKAGLDYSHTLIVKDSTHIQTAFISNDQYREVKNKIRPIYTRTSRYISDFMNAYKKGIVLDLPKYQNSTLINFVGYLEKEWTKQVPLQDRKQTQKVKENNRPKKYRF
complement(33784..34161)           hypothetical protein; CG42_15045                                                     N/A                 MQVVQGLFHFVDWIVEGIMQVGMIILALLGKGCLTFLHFLGDQFQASSNGTKFIYAIAIAVTILIILYFTWHILLMSAFVLAIVIPLFLFVGKIAVSILLGATVIFVVRWLVVTAKNVYQTKIAQ
complement(34180..34674)           hypothetical protein; CG42_15050                                                     N/A                 MVHLLNSQVVVYRKEKEAALKMLPLYKHDLFLELSMPSKGITLIKEAPLQTTDKKEIKRYKIVTLPQRNRDILVLEQDVAGDSDDYLTFMCLDQALSIEMVQAYLAELEMIINDEIYMIICSDEDTGMVRQQRYSIGREKTIHILEHDFDMVQEEAMLALDMAL
complement(34659..34958)           PHAGE_Caulob_swift_NC_019411: hypothetical protein; CG42_15055; phage(gi414089801)     5.34e-07            MQNEVDVIVDVRCYLPDMCYSYDPIHGRTVCIRKDIIGTFVALGRSVPPERLNKVMNLTPLQVEAMEYGSKSGFDKIESNHILVSKLSKEMGERKWYIF
35042..35320                       hypothetical protein; CG42_15060                                                     N/A                 MILFLYIERRALMENKELQDWIYENLLTRQEAMKITKQSKPAFDQSIRTGLIQPFFQKGEQRQMIRLYLKQDIEAYAARIAERQAKSRNSKN
complement(35492..36094)           PROPHAGE_Escher_CFT073: transposase insF; CG42_15065; phage(gi26250329)              8.19e-44            MDLPKMSTVKPRFRYQKPTVSSTCPNLLKQQFHSKQPNRIWVSDISYIPVKKGFVYLCVILDIFSRKVIAWNVYASMTAKLVCDTVERAVHSRNPVQSVIFHSDRGSQYLSQELRQVQEKYNLIPSYSKLAYPWDNAVTESFFKYMKKEELNRRNFSSLEEVKLACFEYIEGFYNSKRPHSANNFLSPNLKELAFLNDSS
complement(36171..36926)           PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; CG42_15070; phage(gi557307613)     2.60e-53            MSHYHQLLNQLNELNLSCMKENLPAHLDEVAKSDKSLVDSLFELTQQEISYRKKESQKKVLKRAMFPYHKRLHDFNFDFQPRIKKKEMQDLLTLRFLDTYDNILFIGNSGVGKTHLAVSIGLECIDRGLSCLFITSTELVNRLIRAHKRGTSETMLKKYSGYSVLIIDEVGYLPFSKEGSNLLFQLINMRYERKSTIVTTNIPLSQWSEIFGNKKLTNALLDRLVHHSKLIQITGPSYRMKSYSENKEVKS
complement(36937..38163)           PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; CG42_15075; phage(gi557307612)     5.82e-17            MRKDVLEGVLRHIMNEIHPNFAALAKQYNCDYRTVKRYYEAGLTGDLDKLRERKPSVPPLLHGFEEIIRDKLELNCSAASIFYFLGKKGYKGSYTTIKRYCRKYREEKVQKATIRIETTPGLSAQVDWKENVKMVSRDGEVFYFNIFLYILGYSRMKYLELTFDRTQPTVFQCLVNAFEYCGNGIPQEIWFDNMKTVVDRSKSQFTQTVFNEKFRQFAKDAGFHPIACRPFRPQTKGKVEALARTVERLMVFNYEFTDVQELKQIIYELMQDLNGSVSQAIHNKPTVLLKEELPILAPIHRLELLSYVSRNKRLLRKVSMESMVQYQNAKYSVPVKYIGKEVTLDIRRDNLFVWYGDKCIRTHPISEKALNYQREDSLEILRSDVFKYLEDEELERFVDDNLHAYDDL
complement(39034..40518)           PHAGE_Vibrio_VvAW1_NC_020488: DNA methylase; CG42_15080; phage(gi460042889)          2.17e-13            MNEETRKKKKRPSLTTLYEGTMKEITSNENRYIEFLNFASRVHKYSFDEQLLLYAQKQDVHMVATFDIWKKLGRFVKHGSTAALLFDYTTQQRKYVFDISETGGEPLQVFDWQLLDNDKNDLLRYWNTYEKQSGTLVNWEDGIHAKIASYQKPIGDQIHPFFVKDIEVVAAYIIYQRKNTLIPEDLLLDVQSVLQIGKRDNTLLEIQHFANLTAKEFLQDVERILNNELKKERVLYHDRIKFEDELSRREWQPASRDRNVRRNDVDWKDREADPIEMGERKIASSDEMEVKRKLSSGSETNGNSSARQDQPVLRETRDERKLTARDGTISESEASEIASDASRGDHSEPTIVEEVKESERPGSFFMPVSERGEQVDLFAEETNYMEDPGISYLDDNEEESVENFRFADTFTFPSGPKAKFQANIAAIRLLHRLETENRFANSEERNILAQYSGWGGLADAFDENKLAFQKEYLELKELLTPEEYQAAFEGTLTTY
complement(40522..40920)           hypothetical protein; CG42_15085                                                     N/A                 MSIIQGFLDICDRIAYFFGELVSIIVTSILLVIENVFTALYHAYQASGQMKWAWWTVMTILACMIVVFIIRYFIIVAVATLFLVPLMAFFVKAFLTIVVATFLLTIVFIIIYKGKTSISKWMRARRSQQEGA
41094..41429                       PHAGE_Bacill_G_NC_023719: gp62; CG42_15090; phage(gi593777530)                       4.25e-11            MTIQHQFAENLSRLKKEHGLKNHQIAELLNVQTRTVAYYMSGETKPDIEKLIRLATYFHLSIDELVGYVQEDKVWNDLSLKQWLLSLNLRSEEEIAKIKILVDTVETLYPN
complement(41466..41996)           hypothetical protein; CG42_15095                                                     N/A                 MKYEEEKHPLFNQEALDQYVEDTSQYYTENMKNAMHLWPNGKMTSSTYEGVRGDDHQVISNYFDNIDMPELTKLKRSEVMKVAAEGVGVLIVVPETEKILKAKNQVLTDKQIQVVCKNNFELDYFSEGIVLTKEKMEAYGVTEAQIQNLAAKNQAAKENKALQLGEVEKSIEDLER
complement(42110..42874)           PHAGE_Brocho_BL3_NC_015254: gp26; CG42_15100; phage(gi327409418)                     1.63e-07            MNTNPRFPKEYLQDVLVRLAHHSSAIEGNTISLADTVSIILHNKVTGKESYDLREIYEVKNHEQAFAYVMEEIEALRPISVPTIKQIHAYLTDRLQYDHGEFKASANAILGADFQTASPQETPLLVQQWVDNVNYRLGTHEESLEKEPSKDDKLETILESHIDFERIHPFSDGNGRTGRMVMNYLLMENDFPPLIIKAEEKAVYMTYLANQDVSGFHTFAQQKLAQEKERVDQFRSTEKEQIQLPKKQKDDLER
45600..45612                       attR                                                                                 N/A                 TTTCCTTACTTAC
