gi|00000000|ref|CP015894.1|  Lactococcus lactis subsp. cremoris strain 158, complete genome. 2250607, gc%: 35.88%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(295693..297378)         PHAGE_Brocho_NF5_NC_015252: gp36; LL158_0288; phage(gi327197621)                     1.84e-07            LactococcuslactissubspcremorisMPKQLKIKADEVAVYAIGGLGEIGKNTYGVEYKDEIIIIDAGIKFPEDDLLGVDYVIPDYTYIVENIDRIKGLFITHGHEDHIGGIPFLLKQANIPIYAGPLSLALIRGKLEEHGLLRDAKLYEIHADSVIKFNHLSLDFFRTTHSIPEPLGIVVNTPQGKIVATGDFKFDFTPVGEPADLHRMAELGSEGVLLLLSDSTNAEIPTFSHSEKVVGASIMKIFERIEGRIIFASFASNIFRLQQAVDGAVKTGRKIVVFGRSMEKAIVNGLELGYIKAPKGTFIEPNEVNQYASHELLIMCTGSQGEPMAALSRIANGMHRHITLQMGDTVVFSSNAIPGNTHGVNQLINKIAEAGVEVIYGKMNNIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMLKIHAGLAQDTGVPKENCFIQENGDVLALTADSARYADHFPAADTYVDGSGIGDVGNAVLHDRHELSEDGIVLAVATVDFEKKTVLAGPDMLSRGFIYMRESGDLIRSGQRVLFNAIREAMHEENANEASVARAMREALSPFLYKQTERSPLVIPMIMTPDEK
complement(297572..297823)         RNA binding protein contains RRM domain; LL158_0289                                  N/A                 LactococcuslactissubspcremorisMLVVNYRMIFKVFYQKDNTRSPRRETTDALYLDLDVATKEEGVVLARELLAKNTAYHVEFIDSLSDESVEYEKETGVFEITSF
298140..298865                     PROPHAGE_Escher_MG1655: protease specific for Gcp(YgjD), essential for nucleoid maintanence; LL158_0290; phage(gi16129761)     1.32e-15            LactococcuslactissubspcremorisMNILAFDSSSKALSVALLTDGLLLGEVTLNLKKNHSTTLMTTIDFLMAQVGMEAKDLDRIAVAQGPGSYTGLRLAATVGKTLAFSLNKELVGLSSLLAIANRVQDDEAYVLPIIDARRGNAYAALYKNGQQIIADQHCNFSEFLADLSEKFSDFSKVIFTGESENFVDAIQNAGFSKEQIIADSLEKLPSAYEIAKIAENLVPENVHAFVPKYLKKVEAEEKWLESHEKAENTPDDYVQRV
298819..299388                     PHAGE_Erwini_vB_EamM_EarlPhillipIV_NC_031007: hypothetical protein; LL158_0291; phage(gi100097)     2.79e-05            LactococcuslactissubspcremorisMKKLKTLLTTTFKGFSGKKFNPRRYLEMADIDLEHDREGVHYRLADRVDIVALLAIERDVYNGDIPWTFSHFEHEIVKNDEAFFIVAEISGSVVGFIGTRINHHGQDAHVTNLAVFKAFQGQQIASTLIEQLISLMAALGKNVMTLEVRRDNTKAQGLYRRQGFVTDKLLPQYYEDGADAIWMVKELKK
299385..299855                     PHAGE_Lactoc_bIL311_NC_002670: Orf17; LL158_0292; phage(gi13095675)                  4.73e-06            LactococcuslactissubspcremorisMNLKRLSYSENKSKDKNTFPPVEKLSVNIYELLSVAYGQSPWSQVYISSDLVNENSEYFLLEEDEQLIGLLAISTMMDELEVTNIAIHPDFQGQGLAKLLLTELSGFTGTLFLEVRQSNFAAQKCYEKFGFEIYHTRKNYYDKPLEDALLMRKEQF
299858..300883                     PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; LL158_0293; phage(gi16130960)     1.38e-80            LactococcuslactissubspcremorisMKDNYILAFETSCDETSVAILKNGSELLCNIIASQINSHKRFGGVVPEIASRHHVEQITVCIEAALEEAEISADQLTAVAVTEGPGLNGALLVGIMAAKTFAWANHLPLIPVNHMAGHLMAASLVDTIEYPAMALLVSGGHSELVYVEKEGSYKKVGETRDDAAGEAYDKVGRVMGLTYPSGKVIDELAHKGQDTYNFPRAMMNTHEVEFSFSGLKSAFINLVHNENQKGNDVIANDLENLAASFQAAVVDVLMAKTKLAMEKYPVKTLIIGGGVSANQGLRERLSAEITDEKLIIPPLRLCGDNAGMIAAAAYIEWKKGLENVQAGLDLNAKPSLVFEDM
300898..301098                     hypothetical protein; LL158_0294                                                     N/A                 LactococcuslactissubspcremorisMMKLIGKLQNGMTFTEEFDGVNDFLALQQSDYNAIADEIEVVEVKIADEVLDFQGNMGQLYYELMK
complement(301532..302323)         hypothetical protein; LL158_0296                                                     N/A                 LactococcuslactissubspcremorisMKNLTFTVTLSDFGLEIHLPSEARLLLLEQNNARFDLNNDELFFLLKKGQIKMIANDLELIPKLEFDKVVILNVKAYELDANYLTQYLVNLAEEAGINLRDKAEPLKIPNNIEKACATYADEFLSALGAFGIKLEKKKAFSPKAQHRWKKGLSEIEFFVKRPDSQATIIWRKSNELVIKAGAKIAESGGMKSDGTPGLAYRFTQTLREEQKENWDPKTFITTADIVLKSVNEVGHFLYFAGTNSWLQLVDKEGRSIHELSVVQ
302622..303671                     phosphonate ABC transporter phosphonate-binding protein phnD; LL158_0297             N/A                 LactococcuslactissubspcremorisMKNTSKKVIGLTAGAVIALSLLAACGNSSSASKSDSKTISDLKISFIPSKNPDDITTATKPIANILKSELKKQGYTVKKIDTSVGTNYQAVGEGLDAGSVDVGYGMSATTYAMYQDGSTPLLMATRKGLSNDASTSAKYWNEHKPTTKTDKEVTSYRSLIIAGNSPMGKKLAKEANDGTLTWKDLNKAKWGLESTSSAAGYMYPSQWLTDNFKHSIRDLKNTVTMDSYDSAMAQLASGQIDVMPEYADARLDEATKWTTTFGAKGSIWDDTNVIGVTPAIANDGIMVSEKSKIMTPEFKKALSTAIKDMSKTAEGKKVIAIYSHDGYVDSTKDDYKTAIKVANEMSKAN
303787..304527                     PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; LL158_0298; phage(gi371496158)       2.58e-32            LactococcuslactissubspcremorisMIKFENVSKVYPNGTKGLTDVNLQIDQGEFVAIIGTSGAGKSTLIRCVNGLNDVTSGRLFVNDTDVSKLKGKDLRKFRRHVGMIFQSYNLVPRVTVLKNVMFARVPDMNLFKVIFGLFSKEDKLVALDSLNKVGILDKAYIRADQLSGGQQQRVSLARALTQESEILLADEPVSALDPVTAKEVMDDFKRINEELNKTILLNIHHVELALEYASRIIAVKKGKIVYDGPSQEVTKEILDEVYRKEG

#### region 2 ####
580607..580618                     attL                                                                                 N/A                 ATCATTGATTTG
580720..580935                     PHAGE_Strept_315.3_NC_004586: putative excisionase; LL158_0562; phage(gi28876311)     4.03e-05            LactococcuslactissubspcremorisMFMEKLYGNKEEICDIFGVAKGTLSNDLTRMRRNPEFSKYILQPSHGRVNISIEGYEKFLKFRSEARKKIL
580995..582119                     PHAGE_Strept_315.3_NC_004586: putative integrase; LL158_0563; phage(gi28876315)      1.88e-35            LactococcuslactissubspcremorisMYKKQQPNGKWKFFEKYQDKQDKWKQVSVTKNSGGREAQSQARTELELKIAEKLSEEKEAEEAPKTINECYAESRKIRQAELAESTYLSETYGLKDFIKKFGQREIISIEPKEMQEYLFSNKYSNTTRHTIALRIGHIFQYAYSMGFTHENIMNRIILPKQKKSAESLAKWKEKFFTMDEMRKFLKSWRSHAVEKDDFKRADFVEFLFLTGLRIGEASGLQWSHVDILKRVIYIQFSWNCNLKKLGPTKNPQSVRYVTLNDRCLEILENFRKDKYGSKFVFVKSNGVQIRNADINTYLKIEGARANLFGKNYKQFSAHMLRHSHITMLAFLGAPQKAVMERVGHMDARITNGFYTHVLPENRQDLQLKLENLNL
582289..582858                     PHAGE_Lactoc_949_NC_015263: putative thymidine kinase; LL158_0564; phage(gi327197854)     5.94e-64            LactococcuslactissubspcremorisMAQLYFKYGTMNSGKSIEILKVAHNYEEQGKPVLLMTSSLDTRAGVGTVASRIGMKAEAIAIDDKMSVFDYVNSLSAKPFCVLIDEAQFLNKKHVYDFARVVDELNVPVMAFGLKNDFRNELFEGSKYLLLLADKIEEIKTICWYCSKKATMVIRTIDGKPVYEGEQLQIGGNETYIPVCRKHYFKPEI
582869..583312                     hypothetical protein; LL158_0565                                                     N/A                 LactococcuslactissubspcremorisMFYHFKGTITGEDYQRILGQMTKRMMLVFSGIMLVFLVVNLLMSKGQWIWPVVSALLVLVLGNLFLHWQLKSRFLKNFKPQELDMYVTEEQIKAQMNVRNVEIFSDRVHFFQGRNQVMIFKKDMLQDVTQWDSFVNMAKNLPLKTKK
583330..584403                     PHAGE_Mycoba_ScottMcG_NC_011269: gp204; LL158_0566; phage(gi203459047)               3.87e-08            LactococcuslactissubspcremorisMFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISDSEEMLGEGGLDDEMKEMLKEELSSAKSQKEVLEEEIKILLLPKDPNDGKNIILEIRGAAGGDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESGAHRVQRVPVTETQGRVHTSTATVLVMPEVEEFEMTIEQKDLRVDIYHASGAGGQNVNKVATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNAERKSTVGTGDRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQTKKLEELNK
584403..584930                     hypothetical protein; LL158_0567                                                     N/A                 LactococcuslactissubspcremorisMNFEFEDFVIREVGHEQRTMQTSKKVNNVLTDVTIFQVKGLNESFDLLYCVGKNGDSWVVAEKIESLSHHLHRAQRTRMSIEKFKGNNYCRLWQEVKKGKDWSQTKKSLPLSEFGKYSKNPIRKTFSELGAKIGTLAELVDETNQNRKQYALLFSPQEIKVPLCAYLLTRISPLI
585000..585755                     Nitroreductase; LL158_0568                                                           N/A                 LactococcuslactissubspcremorisMNENKIMNQTIEKMLVHASVRDFKAEPLPAQTKDLLLKAAQSGASSNFIQAYSIIEVADVNLRCEIAKISGSDAYVNQTGVFYVFVADWYRQAQILRAENKDVKALRNMEALTVAIVDTTIAAQNMTVAAESMGLGICYIGGIRNDTSKVTELLNLPELTLPLFGLTIGLPNSRNEVKPRLPKANILSINGYNHESLTDLSTYNEQTAEYYANRSHHQKSTNWSQEMSDFLTNPRREDLADFLKKQGFTLD
585860..586675                     PHAGE_Prochl_P_SSM2_NC_006883: hypothetical protein; LL158_0569; phage(gi61806059)     1.50e-05            LactococcuslactissubspcremorisMLWIEAVRTLSADLEEPFELEFVWRNLHELNKLSWLNLMREKITDQELNLLTELSERLIKNEPPQYIVGWSEFYELKFKVDERVLIPRPETEELVEMILTENNNDLLKILDIGTGSGAIAISLAKARQNWSVKASDISQNALELAAENAKMNHVNLEFIQSDVMDELTDRFDIIVSNPPYIAFDETYEMDDSVIKYEPDLALFAQNQGLAIYQKIADQAVNHLTDDGKIYLEIGYKQGKAVQAIFQEKFTDRLVSIHQDIFGKDRMISVKR
586706..587170                     PHAGE_Lactob_LF1_NC_019486: GNAT family acetyltransferase; LL158_0570; phage(gi418489409)     2.10e-09            LactococcuslactissubspcremorisMNSLIFEQVFQQKKDFLQILLLADDGPHLENYLENGDLFTLSLKNGKTVACAVVIKKQKNTFEIENFAVETSFQGQGFGQQMMKQLITYLKENLAADELILGTDDISGNVEFYEKCGFEITHIISNYFVENYDQPIFEGKQQLKDKIYLRKKLK
587986..587997                     attR                                                                                 N/A                 ATCATTGATTTG

#### region 3 ####
628303..629121                     PROPHAGE_Lactoc_Il1403: IS1077F transposase; LL158_0614; phage(gi15674057)           0.0                 LactococcuslactissubspcremorisMKVTGFPKATYYYWVNCFERVNKDELIEKEMLKIRQEHANAGYRPMSELLKQRGYHVNHKKVQRLMKKLGLRVTSYWHKSRKYNSYKGKVGTVAKNKLHRRFRTSIPHQKITTDTTEFKYYEDGIQKKCYLNPYIDLFNSEVISYHISKQPSYQSIDIALNQSLAVTSDCPYRRTFHSDQGWGYQMRDYVSKLKSHRIFQSMSRKGNCHDNSVMENFFGLLKQEIYYGHIFSSFEELEQVIVIWIRYYNTKRIKQKLNWMSPIQFRLNYQNN
complement(629176..630015)         PHAGE_Shigel_SfIV_NC_022749: ISEhe3 orfB; LL158_0615; phage(gi557307549)             1.78e-61            LactococcuslactissubspcremorisMKHHGKIKIKHAVKVLKVSRSGFYEYMHRRPSKQQVEREILSEKIKAVFHEHKGRYGAVRITKVLHNTGIMTNTKRVGKLMHLMGLYAKGSRYKYKHYNRKGASLSRPNLINQIFKATAPNKVWLGDMTYIPTKEGTLYLAVNIDVFSRKIVGWSMSSRMQDKLVRDCFLQACGKEHPQPGLIVHTDQGSQYTSSRYQSTLRQVGAQSSMSRKGNPYDNAMMESFYKTLKRELINDAHFETRAEATQEIFKYIETYYNTKRMHSGLDYKSPKDFEKYNS
complement(630033..630323)         PHAGE_Shigel_SfIV_NC_022749: ISEhe3 orfA; LL158_0616; phage(gi557307550)             4.52e-08            LactococcuslactissubspcremorisMARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQEVEEYGESAFPGNGTALADAQHKIKLLEKENRYLQEELELLKKFRVFLKRSK
630571..631026                     Transcriptional repressor of class III stress protein CtsR; LL158_0617               N/A                 LactococcuslactissubspcremorisMAGQKNTSDIIEAYLRQLLEEAQVIEIKRADLANQFDVVPSQINYVIKTRFTASKGFDVESKRGGGGYIKIVKYQYSARHEFLTALYQKVPANLSSKAAHDIVQLLFDEKVLTEREGNLLLLVITDGAISPFTRGIMMKSIINRLDRDDEI
631016..633466                     PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; LL158_0618; phage(gi15800640)     1.24e-159           LactococcuslactissubspcremorisMKFENVKYTPTLDRIFEKAAEDAHQYQYGTIESAHLLAAMATTSGSIAYSILAGMNVDSSDLLIDLEDLSSHVKVKRSELRFSPRAEEVVTVASFLAVHNNAEVVGTEHLLYALLQVEDGFGIQLLKLQKINIVSLRKEIEKRTGLKVPENKKAVTPISKRKMAKGVAENSSTPTLDSVSSDLTEAARSGKLDPMIGREAEVDRLIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRIVNGQVPIGLMNSRIMALNMATVVAGTKFRGEFEDRLTAIVEEVSADPDVIIFIDELHTIIGAGGGMDSVNDAANILKPALARGDFQMVGATTYHEYQKYIEKDEALERRLARINVDEPSPDEAIAILQGLREKFEDYHQVKFTDQAIKSAVTLSVRYMTSRKLPDKAIDLLDEAAAAVKISVKNQETKRLELEKDLVKAQEELAEAVIKLDVKASRIKEKAVEKISDKIYKFSIKEEKRQEVTDQAVIAVASTLTGVPITQMTKSESDRLINLEKELHKRVVGQEEAISAVSRAIRRARSGVADSRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDNMIRVDMSEFMEKHSTSRLIGAPPGYVGYDEGGQLTERVRNKPYSVVLLDEVEKAHPDVFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNLGATALRDDKTVGFGAKNITADYSAMQSRILEELKRHYRPEFLNRIDENIVFHSLESQEIEQIVKIMSKSLIKRLAEQDIHVKLTPSAIKLIAEVGFDPEYGARPLRKALQKEVEDLLSEQLLSGEIKAGNHISIGASNKKIKIAQIV
633601..634158                     sigma 54 modulation protein; LL158_0619                                              N/A                 LactococcuslactissubspcremorisMIKFNIRGENVEVTDAIRAYVEDKIGKLDKYFNDGHQVTAYVNLKVYTEKRAKVEVTLPAKNVTLRAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRNAVPTGQVFGDEFAPLDTTDEVAEDHVDIVRTKHVALKPMNAEEAVLQMDMLGHDFYVFTDADSNGTHVVYRRTDGRYGLIETE
634346..635647                     PHAGE_Strept_20617_NC_023503: enolase; LL158_0620; phage(gi588295080)                0.0                 LactococcuslactissubspcremorisMSIITDIYAREVLDSRGNPTLEVEVYTEDGAFGRGMVPSGASTGEHEAVELRDGDKSRYNGLGTQKAVDNVNNIIAEAIIGYEVTDQQAIDRAMIALDGTENKGKLGANAILGVSIAAARAAADELGVPLYNYLGGFNAKVLPTPMMNIINGGSHSDAPIAFQEFMIVPVGAPTFKEALRWGAEIFHALKKILKARGLETAVGDEGGFAPKFDGTEDGVETILKAIEAAGYKAGEDGVMIGFDCASSEFYENGVYDYTKFEGEGGKKLSASEQVDYLEELVSKYPIITIEDGMDENDWDGWKILTERLGKKVQLVGDDFFVTNTKYLERGIRENASNAILIKVNQIGTLTETFEAIEMAKEAGFTAIVSHRSGETEDSTISDIAVATNAGQIKTGSLSRTDRMAKYNQLLRIEDQLAEVAQYKGLKAFYNLKK
complement(635751..636422)         PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; LL158_0621; phage(gi371496158)       1.67e-37            LactococcuslactissubspcremorisMKAILKMDNITKSFGSGHNKIQALKGINLEVNQGEFVSIIGPSGSGKSTFLTIAGGLQSPTSGNITINGLNFTPLSEKKRSKLRFKEIGFILQSSNLIPYLTLEEQFLLIDKINHEKLASKKGLELLDSLDILDLKNKYPSDLSGGERQRAAIARALFNEPNLILADEPTASLDTEHAYQVVELLRQEAHLKNKATIMVTHDQRMIKNSDSVYQIEDGLLSKI

#### region 4 ####
791345..791584                     PHAGE_Bacill_G_NC_023719: gp59; LL158_0767; phage(gi593777527)                       8.26e-09            LactococcuslactissubspcremorisMTFEEALALLKAGKKVVRTKGWSGAENYVKLYDSIVLESGEKLEVTPYFLINVSGEGEGFSMWAPTPCDVLADDWALVE
791606..792337                     PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; LL158_0768; phage(gi971760361)     3.92e-10            LactococcuslactissubspcremorisMKFSGKKVLITGAASGIGLAQTKAFLAEGAQVVAVDLQEFTDESVSKSNNLSVKMVDVSNAQAVEKLSNEVGTIDILLNTAGILDAYKTLEETDFAEWQRILSTNLNSMYLMISAFLLKMKRQKSGVIINMASVAGLVAGGGGVAYTASKHAIVGLTKQLALDEAQHGIQIAAIAPGAINTPMNAADFTENNGQMAQWVADETPAKRWASPDEVANLTLFLASPQASYMSGAIVPIDGGWTIK
792743..793252                     PHAGE_Strept_Dp_1_NC_015274: QueT; LL158_0769; phage(gi327198320)                    1.88e-16            LactococcuslactissubspcremorisMKKSRTYDIVTIAIVAALYVILTMTPGLSAISYGPVQFRVSEMLNFTAFFNKKYIIAVTIGCMISNFLSFTWVDVIVGGLSTLIFLSLGLFLFERFKGQYFWNGQLNKAFLFFAIFFSISMFTIALELKFVAGAPFFVTWLTLGLGEFASLLVGAFVMDKLGKRVDLSR
793355..793837                     NADH-flavin reductase; LL158_0770                                                    N/A                 LactococcuslactissubspcremorisMKKIAVIAATGKAGSLIAQKALSHGHEVTAIVRNKERLKNQVTAVLEKDIFALTAEDLSGFDAIVLAHRAPAGQEEDYSKVAEKMIKILDGSESRLIIVGGASSLYLDENRDQRLLDVTQTDLPYYPTLLEMAKASLIYESSKLNFTFFSPAEFFDPEGL
794096..794386                     PHAGE_Shigel_SfIV_NC_022749: ISEhe3 orfA; LL158_0771; phage(gi557307550)             4.52e-08            LactococcuslactissubspcremorisMARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQEVEEYGESAFPGNGTALADAQHKIKLLEKENRYLQEELELLKKFRVFLKRSK
794404..795243                     PHAGE_Shigel_SfIV_NC_022749: ISEhe3 orfB; LL158_0772; phage(gi557307549)             1.78e-61            LactococcuslactissubspcremorisMKHHGKIKIKHAVKVLKVSRSGFYEYMHRRPSKQQVEREILSEKIKAVFHEHKGRYGAVRITKVLHNTGIMTNTKRVGKLMHLMGLYAKGSRYKYKHYNRKGASLSRPNLINQIFKATAPNKVWLGDMTYIPTKEGTLYLAVNIDVFSRKIVGWSMSSRMQDKLVRDCFLQACGKEHPQPGLIVHTDQGSQYTSSRYQSTLRQVGAQSSMSRKGNPYDNAMMESFYKTLKRELINDAHFETRAEATQEIFKYIETYYNTKRMHSGLDYKSPKDFEKYNS
complement(795310..796167)         PROPHAGE_Lactoc_Il1403: IS1077F transposase; LL158_0773; phage(gi15674057)           1.40e-163           LactococcuslactissubspcremorisMVCELRREFKFPLKQLLAISELSKATYYYWVNRFERPNKDEMIEQVMLEIRQEHTNAGYRPMVELLKQRGIYVNHKKVQRLMKKLGLRVTTFWHKSRKYNSYKGKVGTVAKNKLHRRFNTSIPHQKITTDTTEFKYYDKGVQKKLYLNPYLDLFNNEVISYEISKQPTYQAIATALQEALELTSDCLYRRTFHSDQGWAYQMKNYVFKLKSQKIIQSMSHKGNCHDNSVMENFFGLLKQEVYYGHVFNSFEELEQAITKWIHYYNTKRIKKKLNWMSPIQYRLTY
complement(796116..796697)         PROPHAGE_Ralsto_GMI1000: ISRSO11-transposase ORFA protein; LL158_0774; phage(gi17546156)     2.51e-15            LactococcuslactissubspcremorisMTKYSFELKLKVVQDYDNGVGGCDYLAKKYHVTNEAIVRRWVKAYKELGAVGIQRKRQNTVYSTQFKLNAVNLYLTSEKSYRELAHELGMNNPPLLTRWVSNYRKKGEFAFSNVQGRPRKESELLEISIKKAKDVVNETEQELARLQNDNLNLRMEVEYLKGLRRLRQEQHKRENPEWSVNSDENSSSHLSNS
complement(796751..797590)         PHAGE_Shigel_SfIV_NC_022749: ISEhe3 orfB; LL158_0775; phage(gi557307549)             1.78e-61            LactococcuslactissubspcremorisMKHHGKIKIKHAVKVLKVSRSGFYEYMHRRPSKQQVEREILSEKIKAVFHEHKGRYGAVRITKVLHNTGIMTNTKRVGKLMHLMGLYAKGSRYKYKHYNRKGASLSRPNLINQIFKATAPNKVWLGDMTYIPTKEGTLYLAVNIDVFSRKIVGWSMSSRMQDKLVRDCFLQACGKEHPQPGLIVHTDQGSQYTSSRYQSTLRQVGAQSSMSRKGNPYDNAMMESFYKTLKRELINDAHFETRAEATQEIFKYIETYYNTKRMHSGLDYKSPKDFEKYNS
complement(797608..797898)         PHAGE_Shigel_SfIV_NC_022749: ISEhe3 orfA; LL158_0776; phage(gi557307550)             4.52e-08            LactococcuslactissubspcremorisMARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQEVEEYGESAFPGNGTALADAQHKIKLLEKENRYLQEELELLKKFRVFLKRSK
798110..799132                     N-acetyl-gamma-glutamyl-phosphate reductase; LL158_0777                              N/A                 LactococcuslactissubspcremorisMKKIAIVGITGYSGLELLRIFYGHPEVEVAKVCATSHYGEKLSELFPQLENLTDLTVSEFNDEKIMAECDAVFFATSSGVSQNLALAFIDADFPVIDLSGDFRLNKVETYEKWYKNTNVKNEYLLKSEYHLADIGKASGNYIANPGCYATATLLALYPSVKNEMIDLNSIIVDAKSGLSGAGKTLSESSHFVNVADNMSMYKVNAHQHIPEIAQQLKIWNPNFQALQFSTSLIPVSRGIFVSTYAKVVSNFDIDQIRRAYVQAFLDKTFVRIRRQMPQLSDVIGTNFCDIGLAYNPVTNVLSIVSVIDNLMKGAAGQAVQNFNQLFGYDESLGLNFLPRR
799144..800331                     bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; LL158_0778     N/A                 LactococcuslactissubspcremorisMKKIKGTIASPKGFVADAVHTQLKYKNLDLGMILSDVPAAIAGVFTTNKVAAAPVLIDRAIVKNGQAQAIICNSAVANAVTGEQGFQNALKTQKVFAHKFKIKADEVAVCSTGVIGLQLPMEKMVNGISKLSQNGKPEYFAKAILTTDTKCKTINFEEEIGGQIVNMAGVCKGSGMIHPNMATMLAFITTDVKISQSLLQKMLSEIIEKNFNQITVDGDTSTNDTVLVMANGQAKNQEILADSQDYQLFKEMLTEVCQHLAKEIAADGEGATKLIEVTVKGAPDDLSARMIAKKIVGSSLVKTAIFGADSNWGRIISSIGQVATFEVNDIELKIQNELVLYHSTPVTFDNAFLSEKLKEDKIKIVADLNSGNGNGQAWGCDLTYKYVEINALYTS
800349..801482                     PHAGE_Mycoba_Myrna_NC_011273: gp183; LL158_0779; phage(gi203454746)                  4.08e-15            LactococcuslactissubspcremorisMTDLFENYGRLPFSLTKGQGVYLYDDKGNKYLDFTSGIGVMNLGYTFEKGKNAVKVQLDSLPHLSNLYQNPLQEEVAAKLSQNHKYKAFFCNSGTEANEAALKLTRLIKAGHKILAFTDGFHGRTFGAMSATMQEKIQAGFAPLLPDFVATPYNDVAALQQVVENEKIGAIIFEIVQGEGGVLPIRADFVQALKSCQQNGILLIVDEVQTGIGRTGNLFSFEHFGFEPDIFKVAKALANGLPTGAMLAKNHYAHYFSAGKHGSTFGGNPLAMACANQVLTAMDNDFLENITDKGNFFLNLLTEKLSVKSTVKRIRGLGLMIGIQLADEKKVPEVLALLRENGLLDLPAGHDVIRLLPPLVMTKEELQKGAELLEKLL

#### region 5 ####
1003826..1003838                   attL                                                                                 N/A                 ATAAAAATAAAAT
1011649..1012341                   PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; LL158_0983; phage(gi371496158)       2.64e-40            LactococcuslactissubspcremorisMSIIKLSNVSKKYSNGTTALRNISLEIEAGEFTYIVGPSGAGKSTFIKLLYRELKIDSGSGTVAQYDLSKLRRRDVPLLRRSVGVVFQDYKLLSKKTVYENIAYAMEVIGKSPREIKKRVNEVLDLVGLKHKIRSFPNELSGGEQQRVAIARSIANAPKVLIADEPTGNLDPENSWEIMNLLEKINLQGTTILMATHNSQIVNTLKHRVIAIENGRIVRDQEEGVYGYDD
1012334..1013269                   cell division protein ftsX-like protein; LL158_0984                                  N/A                 LactococcuslactissubspcremorisMIRNFFKHILESLKNLKRNGWMTVAAVSSVTITLVLVGLFLSIILNTQRLTKGIENNVRIVAYMKLDVHDQEAKIQDPKNNKKIINNPDHLKIYDSIKEIPNVKTVTFSSKEAQLQELTKALGNNWNLFKGDANPLYDAYIVEADKPINVKAVTSKISKLSGIEKATYGGANTAKLFQIARGVQTWGTAAAILLIFVAVFLISNTIRITILSRQREIQIMRLVGAKNGYIRWPFFLEGAWVGLLGSIIPSLIVAWAYRLAFVSLTPSLQSQKLSMYETSEFIPAIVGLMAIIGILIGSFGSLLSMRRFLKI
complement(1013379..1014356)       PHAGE_Entero_phiEF24C_NC_009904: putative ribonucleotide reductase; LL158_0985; phage(gi158079504)     3.55e-149           LactococcuslactissubspcremorisMSETENLTVPTYYSAIDWNSIEDSIDKYTWEKLTSQFWLDTRVPVSNDLDDWRKLPQLERDTFAKAFAGLTLLDTLQSVDGAEVLKHDARTPQEIACFNNIQFMESVHAKSYSTIFSTLNTKKEIEELFNWVDTNVYMQTKAEIINKIYESGTALQKKVASVFLETCLFYSGFYTPLLYLGNNKMINSAEIIKLIIRDESVHGTYIGYKFQLGFNELSEDEQSEFRDWMYELLYKLYENEENYSHLLYDKVGWTDEVLTFLRYNANKALMNLGQDPLFPDTAADVNPVVMNGISTSSSNHDFFSQVGNSYLLGEVEAMSDEDYDI
complement(1014740..1016908)       PHAGE_Entero_phiEF24C_NC_009904: putative ribonucleotide reductase; LL158_0986; phage(gi158079505)     0.0                 LactococcuslactissubspcremorisMSLKQLKDVTYFKLNNEINIPVNGSIPLAKDKEAITAFFKENVEPNRYEADTYIDKLNWLVKEEYLEAEFLEKYKPEFITNLRKELSKFEFHFDSFMAAYKFYNQYAMKNNDGSLYLEDFEDRVLMNALYMADGDEKLANNLAFAMINRRYQPATPTFLNAGRKRRGEFVSCFLLQLTDDMNSIGRTINSALQLSKNGGGVGLNLTNLRAAGAPIKGYDGVAAGVVPVMKLFEDAFSYANQLGQRQGAGVVYLSLFHPDIMEFLSTKKENADEKIRVKTLSLGVTVPDKFYELVKKGETMYLFEPYFVEKYYGKPFAEVDITAEYDKMVANPEIRKTPINARELEQELSKLQQESGYPYIVNVDTVNQANPVDGVISMSNLCSEILQVQTPSVLNDDQTYKVVGTDVACNLGSTNVLNMMTSSDEFGTSVESMVRALTFISETSNLDTVPTVRKGNDEMHAIGLGAMGLHSYLAQNQIHYDSKEAVEFTSVYFMLLNYYTLVASNKLAVEKGASFKNFEKSAYADGSYFDKYLTHDYFAAVSPKVQELFKGIAVPTIADWTELRDTVKTSGLYNSYRMAVAPNGSISYINDCSSSIHPIVNRIEERQEKKVGKIYYPAAGLATETIPYYKSAYDTDMRSVIDVYAAATEHVDQGLSLTLFMRSTLPEGLYEWKVANNKMTTRDLSILRNYAYKKGIKTIYYIRTFTDDQEEVGANQCESCVI
complement(1017045..1017467)       PHAGE_Lactoc_phiL47_NC_023574: putative ribonucleotide reductase stimulatory protein; LL158_0987; phage(gi589890882)     3.73e-16            LactococcuslactissubspcremorisMKLAYFSVTGQTRRFVSKTDLPNVEITPDDDLEMDEPFLLITPSYAEESPTVSKSIDVMDPVFEFMAYNDNYKHCRGIIGTGNRNFAGIYIFTAKEVSAKYQIPLLYDFEFNGTPADVAAVEKLAAQLDQGAKVTFKNPL
complement(1017469..1017687)       PHAGE_Lactoc_P087_NC_012663: putative thioredoxin/glutaredoxin-like protein; LL158_0988; phage(gi229604988)     1.81e-18            LactococcuslactissubspcremorisMVTVYSKNNCMQCKMVKKWLSEHEIAFNEINIDEQPEFVEKVIEMGFRAAPVITKDDFAFSGFRPSELAKLA
complement(1017861..1018502)       acyl-phosphate glycerol-3-phosphate acyltransferase; LL158_0989                      N/A                 LactococcuslactissubspcremorisMLIIILLLIASYLLGAIPFGLWIGKIFFKKNLHDYGSGNTGTTNTFRILGVKAGIAVFIFDLLKGTLATLLPLIFHINGVSPLIFGLLAVIGHTLSIFDHFKGGKAVATSAGVVLGFSPFFLLYLLVIFILVLWLFSMISLSSVVAAIFALLGILIFPSFGFILTSYDLLFSIIIFALAIIIIFRHKTNLKRIKNHCESLVPFGLNLSGQKEK
1018781..1020715                   PHAGE_Bacill_G_NC_023719: gp252; LL158_0990; phage(gi593777708)                      2.42e-165           LactococcuslactissubspcremorisMVIDINNYDDSAIQVLEGLDAVRKRPGMYIGSTDGTGLHHLVWEIVDNAVDEALSGFGNKITVTINADGSLSVEDEGRGMPVGKHAMAIPTVEVIFTILHAGGKFGQGGYKTSGGLHGVGSSVVNALSTWLEVEITRDGTVYRQRFENGGHPATTLEKIGKAPKSKTGTKVTFMPDSTIFSTTEFKYNIISERLNESAFLLKEVTISLEDKRTDEKEEFHYENGVQDFVAYLNEDKDSLTPVLYFEGKQDGFEVEVALQYNEGYSENILSFVNNVRTKDGGTHEAGLKTAITKAMNEYARKVNLLKDKDKNLEGSDYREGLTAVLSVLIPEEHLQFEGQTKDKLGSPLARPVVDSLVSEKLSFYLMENGELAQNLIRKAIKAREAREAARKAREDSRNGKKSKKDKGLLSGKLTPAQTKNPNKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVINTEKAKMQDILKNEEINTMIYTIGAGVGADFTLADRNYDKVIIMTDADTDGAHIQTLLLTFFYRYMKPLVEAGHVYIALPPLYKMSEGKGKKEKIEYAWTDGELAELRKQFGKNANLQRYKGLGEMNADQLWETTMDPETRTLIQVTIDDAAQAEKRVSVLMGDKVEPRRKWIENNVKFTMEEDTAF
1020822..1021358                   isochorismatase; LL158_0991                                                          N/A                 LactococcuslactissubspcremorisMQNSALIIIDLQAFIKKLAKKAEPYGWDKIIENNRALIAAFDQANQPVYLVTVEPKILWKSAKEAFSRMILQDELDNNSRLHKLVKFGPSAFKQSDYGLADELKKLSVSKIYVTGVSLSNGVVKTAKDGAESAFESFIIEDACADRKLKNFQKTLTEIPKFGKVIKTKEIIEELNKNV
1021351..1022184                   PHAGE_Clostr_phiCDHM11_NC_029001: hypothetical protein; LL158_0992; phage(gi971764697)     2.80e-26            LactococcuslactissubspcremorisMSEKYVVFDFETTGFSAQKNEIIQIGAVKYDENNQELARFNQLVKNQRSYVSTEITQLTGIKPADLLNQPTIEEILPDFLDFIKGHLLVAHNAPFDISFLNQAIIDCAITDVEAFRVYDTLAESKKLLTMSSYALENFKDLLEMNDLRSHDALNDCLITAKLYQYLQKIEEVERSVESEVADELGQLDLFGDSSDEITDSIRRKLNLPITKALVYYQQNLERKWERFEVLGISVEREYSTGSSLKIRLHNSEKVKIHSDFLKEMQKANFVTIMEEEK
1022181..1022561                   PHAGE_Erwini_vB_EamM_Phobos_NC_031043: hypothetical protein; LL158_0993; phage(gi100103)     4.36e-05            LactococcuslactissubspcremorisMTAIWKLKNFNQLTTDEMYQLLSLRTAVFVVEQNCPYQELDGKDQVAQHLWLENDKGELMALCRLLPQGISFNEASIGRVLVNPEFRGQNLGRGLIDKALEVLKENGEAAVTIEAQYYLRDFFTSN
1022782..1025256                   PHAGE_Bacill_G_NC_023719: gp254; LL158_0994; phage(gi593777710)                      1.53e-103           LactococcuslactissubspcremorisMSNIQTLPLEDIMGDRFGRYSKYIIQERALPDIRDGLKPVQRRILYSMNKDGNTFDKSYRKSAKSVGNVMGNFHPHGDSSIYEAMIRMSQDWKMGEPLIEMHGNNGSMDGDPPAAMRYTEARLSEISGYLLSDIEKDTVSQAWNFDDTEKEPTVLPAAFPNLLVNGSTGISAGYATDIPPHNLGEVIDATIHMIDHPKADVEKIMEFLPGPDFPTGGIIQGKGEIRKAYEKGKGRIVVRSKVDIEPMKGGREQLIVTEIPFELNKANLVKKIDDVRVNAKVPGIAEVRDESDREGLRIAIELKKEADSQLVLNYLFKNTDLQVNYNFNMVAIDNMTPVQTGVLQMLRSYVKHREDVIIKRSQFDLNKAEKRLHIVEGLIRMVSILDEVVATIRASENKADAKENIKVSFGFTEEQAEAIVTLQLYRLTNTDIVTLQNEQAELEQKILELKAIINDERTLFNLMKRELREVKKKFAKPRRSELQDEVQTIEIEASELIVAEDTVVSVTRSGYIKRTSPRSFASSALEEIGKRDDDELLYYANAKTTQHLLIFTNLGNVIYRPIHELSDVRWKDIGEHLSQSLSNFSSDEKVIYVQIVDAFAGENLVVVTRNGQIKQIERESFSPWRTYRSKSTPYAKLKGNDDEIVLISPVQFTDLMIISENGYALRFNLDDVSVLGARAAGVKAMNLKNDDKIKAAFFVNSNSWYLLTQRAFIKRVKTEDIPATSRANRGLQVLRTLKTNNHTVFAAGLINSTADLSALTEELDLFSQAKAPATKETDEQVLEVISETGKKYDINLCDLSLSDRTSNGHTIADDLEKIASVKIK
1026074..1026754                   PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; LL158_0996; phage(gi985761246)     2.72e-89            LactococcuslactissubspcremorisMNYFKGKQFQKDVIIVAVGYYLRYNLSYREIQELLYDRGINVCHTTIYRWVQEYSKVLYHLWKKKNRQSFYSWKMDETYIKIKGRWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLHKQFGQPRVIVTDKAPSIGSAFRKLQSNGLYTKTEHRTVKYLNNLIEQDHRPIKRRNKFYRSLRTASTTIKGMETIRGIYKKNRRNGTLFGFSVSTEIKVLMGILA
1027495..1028583                   PHAGE_Pseudo_PaMx11_NC_028770: putative dCMP deaminase; LL158_0997; phage(gi971741824)     5.46e-09            LactococcuslactissubspcremorisMENDEHFMNLAILLARKGGGNVNPNPQVGAIIVNDGQIIGQGYHEKYGEAHAEINAFKSCIESPEGSTIYVTLEPCAHQGKQPPCFEAIIKNKVKRVVIGSLDPNPLVAGKGIEAMKKAGIDVSLKVLEKECKDLNKIFFHYVTQRTPYVMMKYAMTLDGKIATYKGQSKWITGEKARQKVHEDRSRFMAIMIGVETLLKDDPQLTARIKNGINPIRIICDTQLRTPLTSKIVSTAFEIPTIIATSNENIQKHQAFIEAGCEILLVSSISEHLDLKDLITKLGEREIDSLILEGGARLNASALKAGIVQKVQAYIAPKIFCGKEAPSPVEGQGVEHPNQAYLLDRPKVVYLGEDILLESELI
1028583..1029230                   Riboflavin synthase alpha chain; LL158_0998                                          N/A                 LactococcuslactissubspcremorisMFTGIIEEVGEVTQIQKRDKSSKLSIRASSILEDLKLGDSISTNGLCLTVSAFNHKEFTGDVMPESFKRSNLGELTVGSKVNLERAVALNGRFGGHIVSGHIDGTGKILSIKKEENAVWFEVQTTVDLMKYVVEKGSITIDGISLTVAHVTSKSFSVSIIPHTIKETILSAKKVGDKVNLENDILGKYIEKLLTGKDSFTGPSLLTKDKIIDYGF
1029242..1030438                   PHAGE_Synech_S_SKS1_NC_020851: 3,4-dihydroxy-2-butanone 4-phosphate synthase; LL158_0999; phage(gi472340887)     1.53e-37            LactococcuslactissubspcremorisMFQYNTVEEALTALKAGEMIIVTDDENRENEGDLICAAEMISPEKINFMASQAKGLICSPMSEKYAKSLHLSAMTERNTDNHGTAFTVSVDHVETSTGVSAFDRSLTIRKLADEESSFEDFRRPGHVFPLIAKKNGVLERNGHTEATVDLLRLAGLKEVGVCVEIMAEDGSMMRTEELQEKAKEWDLNFITIKAIQEYRKQNEQLVEQVTRAKLPTKYGYFEIFGFVNKINGEHHVALVKGDIGEDEAVLCRVHSECLTGDAFGSMKCDCGEQLEQALTQINAEVRGVLLYLRQEGRGIGLINKLRVYSLQDEGLDTIEANLALGFEEDAREYSIGAQILKTLGVKSLRLMTNNPQKINDFSKYGLPVKERVPIQIKENEFDQDYLKVKQNKMGHLFD
1030465..1030929                   67-dimethyl-8-ribityllumazine synthase; LL158_1000                                   N/A                 LactococcuslactissubspcremorisMTVFEGNLTTGNAKYGIVVARFNEFINAKLLAGALDALKRHGVQEEQIDIAWVPGAFEIPLIAQKMASSDKYDAIICLGTVIRGSTSHYDFVCSEVSKGIAHVSLNSNIPVMFGVLTTENIEQAIERSGTKAGNKGFEVAVGAIEMVDLMAKIS
1031111..1031371                   PHAGE_Shigel_SfIV_NC_022749: ISEhe3 orfA; LL158_1001; phage(gi557307550)             1.02e-05            LactococcuslactissubspcremorisMQKRYSKEFKETLIAFYHSGQSVTQLSKEYDVAPATIYKWIDLYSKSNESSISKADFLELKRQLAKVKEERDILKKVLTIFAEKKK
1031383..1032222                   PHAGE_Shigel_SfIV_NC_022749: ISEhe3 orfB; LL158_1002; phage(gi557307549)             2.20e-44            LactococcuslactissubspcremorisMAQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLVKKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKKNKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRMTVELVQRTLNKAIKSQAYPEAVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYHNASLESWHGHLKREWVYQFKYKNFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA
1035964..1035976                   attR                                                                                 N/A                 ATAAAAATAAAAT

#### region 6 ####
complement(1267186..1267944)       PHAGE_Strept_315.3_NC_004586: putative cI-like repressor; LL158_1232; phage(gi28876313)     1.67e-14            LactococcuslactissubspcremorisMNFGQNLKKLRKEAKLTQSQLADKLGMKQNAYVLWEQKATNPTLELLEKLADIYDLPIQELIKNPDNGAEKQLIDNYRSLTGEQQESVINFTDFLIEQNKADLIDLKTYRRSSLQYAVVEDEALSAGFGQTANNTGGHYRAYTTENLGRYDGAARVKGESMEPDFPNFSIATFLHTGFGRSGDVYAIAEGDLGEERLYIKQVFEEEDGNFRIHSLNPDPQYKDFYLGQEDNFRIIGPVVDNFEEIEESQIID
complement(1268063..1269847)       PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; LL158_1233; phage(gi9630145)         6.12e-21            LactococcuslactissubspcremorisMEKSTDKMSVRESWQVFKFIFKFLLPFKRYFIWAFVFSVITTALASLMPFVLSVFMDTYLTPMKATNQIIFYFAGLYLLLAIINSIASFFKWNYLQNGSIFVNQYIRKKVYGKIHQLGMRYFDQKPTGWLITRITNDTDLFDFWQTLFNALTSVLSIVIAFVALFVIDHKIALVMLLILPLLILAVIIYQKVSTKVYQAMLAKRSELNTKLNEYISGMRIIQQFRQESRLGNEFEKTNDEYYGYRKKVIQINGILLSPLVNFLMAISIVVVLLMYSNRSLHAVVEAGLIYAFISNVQIYFNPISGLMDSLSNFSNGLVASSRIKTIMEEQEFAPKQGSKSSVSKAPLIEQGKIEFRNVSFSYDGEHQVLKNISFIVNPGETLAFVGHTGSGKSSIINVFMRFYEFTEGQVLIDDQDIRTFTKEELRHKIGLVLQDSFMFVASVTDNIKMMNSQITDEAAKEAARFVQADHFIKDLENGYETKVIEGGAAFSAGERQLINFARTIVRNPKILLLDEATANIDTETEALIQDGLTNMRQNRTTMAIAHRLSTIKDADQILVLNKGEIIERGNHDELLELNGYYADMYRIQTLQKEL
complement(1269831..1271648)       PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; LL158_1234; phage(gi9630145)         2.95e-21            LactococcuslactissubspcremorisMKIFKDLWWFFKSERKGYGVGLLALFIVSLTHLIPPLIIGKIIDHIVKRNLTLSLILSFSGILLLTAFVEYGFRFLWSTNIWGEAFKLEKIIRSRLFRHFLRMDTLFYQRNRTGDLMAHATNDLQAIQSVAGLGVLTWADSLMTGGMTIIAMLLFIDWRLTIIAVLPLPLLALVSKILGDKIHVSFEHAQETFSEMNDKVQESITGMKAIKSFGEEEQDMADFQDKLDNIDKAFVRVNWIDSMYDPLITLIVGLSYTLTILLGGYYVVHHVLTLGQLVAFVTYIGNLVWPMFAIGVLFNVIERGRASYSRVDKLLAQKAESKISEGTLKMPKEGDLSFDIESFTYPNENEGRNLEKVQFNLKEGQVLGLVGRTGAGKSTIIKLLMREFDHYKGQITFADQDIMNYQLDEYLPAIGYVPQEHFLFSMSVRDNIRFAKMSASQEEVEIAAKTAGIHEDIITFPEGYDTLVGERGVSLSGGQKQRLSIARALLIQPKLLILDDALSAVDAKTEQLILSNLKALRHESSTLVVSHRLSSVMEANEILVLDEGKIIERGLHEDLVKTGGWYAQMWQMQQIESHLTATDKDENLLTDSSGTLKGGENGEIY
complement(1271786..1273036)       PHAGE_Lactoc_BK5_T_NC_002796: hypothetical protein; LL158_1235; phage(gi14251157)     1.50e-23            LactococcuslactissubspcremorisMMNKTIKFYLLTSALLLFSPNVLADSQPFIPAGGISASNVYQPDGRKMITSANQFPYNTIVYIVTVGGNGTVYYSSGVIIAPNTVLTAGHVIYNRPNGGYIKSATVYQANANGTYNSNTAATVTGKVANPDWLAKDSLITNGYPSNNADDLGILNLSKNIGLSTGWMGMTSTLSTNQTISLIGFPGDHAGQMWGMSGNVSQISNPLFNYSNISEFPGQSGSPIFNTSNNIVGINVADANYPNNTNPTHYVPSSLASQYPNYGVQLTASNINWIQNNVPALKSTALYRVYNPNNGEHLYTKSLYETTTLSKIGWNYEGVNSQQPATGNAVYRLYNPNSGEHFYKTSSFERDSLVKAGWRFEQIAFYSDTAKHTPIYRLFNPNAKGKQISHFYTSSCAERDSLVKIGWRYEQISWYGL
complement(1273050..1273640)       PHAGE_Lactoc_BK5_T_NC_002796: hypothetical protein; LL158_1236; phage(gi14251157)     2.21e-12            LactococcuslactissubspcremorisMNTYRTHKKLFKNGLLFGALLLGIGLSFKEATPAKAVTANFNGPVYRLYNPNSGEHVYTMELTEKNNLVSLGWGYEGILGTSYYTMNSQSYDKIPVYRLYSKNSGEHLYTINTNEVNQLKNYGWVNEGIVFYDASHYGYPHGEIINRLYNPNSGQHFYTKSIEETAFLTKIGWNDEGVAFCFSSPVPPQSGPLSPA
complement(1273694..1274281)       PHAGE_Lactoc_BK5_T_NC_002796: hypothetical protein; LL158_1237; phage(gi14251157)     1.45e-18            LactococcuslactissubspcremorisMNIYTSHQKLFKNGFLFGALLLGLAFSFIEATPAKAVTANFNGPVYRLYNPNSGEHVYTMGLTEKNNLVHLGWGYEGVLADSYYNYPGVNYTKIPVYRLYNSQSGQHLYTKNTYEVSSLRTKGWSNEGIVFYDSSNCPMASTTPVYRLYNPNSGQHFFTNDFNESNYLMNLGWNYEGEAFKFNYPYQWEGKITPL

#### region 7 ####
1846563..1846585                   attL                                                                                 N/A                 AACGTAACTAAAAACGTAACTAA
complement(1846967..1847905)       PHAGE_Oenoco_phi9805_NC_023559: bactoprenol glucosyl transferase; LL158_1796; phage(gi589286215)     9.85e-107           LactococcuslactissubspcremorisMRMSKLSIIVPAYNEEETLEIFLNEVNKQSVELPLEKTYFFINDGSTDNTLEVLKNLTTKYDNVKYISFSRNFGKEAALIAGLEVSDGDFVTVMDADLQDPPEMLNEMFTKITEGYDVVGTRRVSRVGEPPIRSFFAKTFYKLINKISDTEMVDGVRDFRLMTRQVVDSILELKENNRFSKGIFSWVGFKTTYLPYENRERVAGTTSWNFFGLVKYSIDGIVNFSEAPLNIATFVGFISFLASVLLSVFYLLKTLVFGDPVQGFPTLIVLILLLGGLQLLSLGIIGKYIAKIFLETKKRPNYIIKESNIKPN
complement(1847823..1849352)       hypothetical protein; LL158_1797                                                     N/A                 LactococcuslactissubspcremorisMQSRILWLDKLSNGLIVTITISLILLFLFITFAKKSLFQKVFSFIRLYEKRIFWIFFIFCIIYQIVLVITLNGTPKFDSYRLIHVEDIKAISDYLSVNSNNNFLFFINYYFIKIFGFSYMNFRILNSLIIFTSTLLFLKISKELFGKTVSYFSTISFMMFAIIQPLYLVPYTDTYCLLPVFLSIYFITICIKSKKTFSLIFSSIGSAFFLAISYLTRPSSITFIIAVLLFILINLYKKDIRIKSLISFPPFLLTVILTLTMFNLFVSNQKIVKIDKSKELPMAHFILMGSFGDEDNRESIHGTWNAGDLKSTLAEKNKSDKSKKDIELFVERTANRGLARTIKFYGQKYFQITDTGVIGYHRDGLWLNYAYSANGSLSNKIQQIYYENGKLRPSFNFLCQIFWIITLISSIIALYFNRTWKVGVVTLSLLGGLLFLLIFESGGTKYMFQYIYLICLLSGLGISYCLNRFSGDIAIQKEGVKKNEDEQTLNNSSSLQRRRNTRNISKRSK
complement(1849514..1850353)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; LL158_1798; phage(gi48697274)     6.59e-56            LactococcuslactissubspcremorisMAQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLVQKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKKNKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRMTVELVQRTLNKAIKSQDYPESVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYHNASLESWHGHLKREWVYQFKYKNFEETYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA
complement(1850365..1850625)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; LL158_1799; phage(gi48697273)     6.22e-15            LactococcuslactissubspcremorisMQKRYSKEFKETLIAFYHSGQSVTQLSKEYDVAPATIYKWIDLYSKSNESSVSKADFLELKRQLAKVKEERDILKKVLTIFAEKKK
complement(1850737..1851063)       hypothetical protein; LL158_1800                                                     N/A                 LactococcuslactissubspcremorisMCNCFSTALQIGKDKNVRLITPDYFGIRTVLVDACIAPVIQHLWKHHIWTENSCCEHLGVEGRPESWGGNKPSIVLGNNVKDFDRVRELIAEVDDREFELSQWQRVIV
complement(1851135..1851554)       PHAGE_Lactoc_98201_NC_031064: hypothetical protein; LL158_1801; phage(gi100023)      1.13e-93            LactococcuslactissubspcremorisMTRGFKKLDGNATIPERATKHSAGYDISASETVTIQPDEIKVVSTGLAVQLGDDEVLKLYDRSSNPVKRAIALINSVGIIDSDYYPQEFKDLFMNISKEPVTISKGQRIMQGVFVKYLTIDDENANGKRTGGFGSTGEV
complement(1851786..1852544)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; LL158_1802; phage(gi557307613)     1.79e-53            LactococcuslactissubspcremorisMTTYHQLLNQLDHLKLDRVRQLLPEFLDEHADISLVEGLHELLSEELREREALLQERRLKKAHLPYEKRVMDFDFQFQPKINKAEILDLHTLRFLDKHENLLFIGNSGVGKTHLAISITLEALEKGYSSYFCMSTELVDRLLRANQKGTLERVLKQYANYDVLVIDEVGYLPFSRDGASLLFQLINMRYEKKSTLITTNIPLSQWSEFLQDKKLTNALLDRLVHHSKVISITGKSYRMKDYSEKKTKTPKSK
complement(1852556..1853779)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; LL158_1803; phage(gi557307612)     9.02e-22            LactococcuslactissubspcremorisMRKDILESITEHLMTGIKPNFADIARRYNCDYRTVKRYYDLGKEKTLEEASKRRVPPSLIENYKSIIEDKLKLGCSVRSIYYFIQLKGYQGSYTTIKRYARLIRESCKHKATIRIETTPGLSAQVDWKENLKLISRNGEVFTINIFLYILGYSRMKYLQLTVDRLQPTLFECLNHAFEKFGGVPEEIWFDNMKTVVDHSKSQFSNVVFNERFRQYAKDAGFKPIACRPFRPQTKGKVEALARTVDRLLVFNNEFEDLEELQALVQQLMEDLNHKEISQAIGTSPSERLDQEALNLKAFDLELLKVYSQLSVPLTRKVSKEALVIFEGRKYSVPVKYIGQTVTCEKEQEDLKVYCDQRLIARHPLSDRPFNYRREDYVEILKSDVFKHLEEDELEAYVDENLQAYDLL
complement(1853855..1854379)       hypothetical protein; LL158_1804                                                     N/A                 LactococcuslactissubspcremorisMNELIQPVLALGGLGYLNFLIYSRIDNPDFGSESDKKLMILLYSSMNYGIYLLLSLYFKLVPSILIAISLSIILTLFFPFISRKLFILTNWIRSIYGVPDISNTKVQDNFFEKRESFPMFIFSIPDNTLITCGYRGSKNGMNEDFSIINYNFYGNEGFCRIKNEKDLLDYIENM
1854642..1855226                   PHAGE_Lactoc_ul36_NC_004066: putative cI-like repressor; LL158_1805; phage(gi146334929)     1.52e-80            LactococcuslactissubspcremorisMFYNKFMKKENSQIRLKKIMNDRGLRQVDILEKSKPFQDKLGIKMSKTHLSNYINGKSNPDQQKLILLSQTLGVSEPWLMGYDVPMIEPRESENDSETIEKTVTVMKKLEEPRQKVVLDTASSQLEEQEKAKRAVKPKTKVTPLFDINSPLTDEELQEAVDEAVAFDGVPLTDREKELYKHLLRETWEEDHGRG
1855232..1855666                   PHAGE_Lactoc_bIL285_NC_002666: Orf3; LL158_1806; phage(gi13095683)                   2.71e-17            LactococcuslactissubspcremorisMSVIKELLSELALKIKYYNPSDYPHLKDGMKFNIRGTTYIFIDIFNSEKVTQNILLHEIGHVSFGHRHLDCRSSGWDRRQERESDRYMIEHRADEWLAQFDWEPDVIDYDKFIEYFELEKRHYGLVVEVFDEIIGQPQLHSHCL
1855680..1856015                   hypothetical protein; LL158_1807                                                     N/A                 LactococcuslactissubspcremorisMDYTEFRKYVEENTRAQGKFLEKATIYLLDKNVSRQSSAKWPDSRIEKEANKMWDMNISGAFISVSEGIKNAENKPRFHNHEEQVSYWINFMNEYEFLENFTDGIDDMEFE
1856082..1857263                   PHAGE_Lactoc_bIL310_NC_002669: integrase; LL158_1808; phage(gi13095863)              4.12e-119           LactococcuslactissubspcremorisMNIKEVQKKDGTTVYKVNVYLGVDSLTGKQVRTTVTAKNRKTCENKAHQAMNKFIKNGSTVAREKVSFDNFNALATSWFDSYKLTVKANTIRINSNFLKNYILPALGNYKVEKITTVLLQNIVNDWARNANTAEIVNGNREKGKSKDYKLLLNIIKRILDYGMQLGVISDNPAIKVFSPKLKTRTVKKIKYFNNDELKRFLDYLDSLQSTTANIKSTTLYKLLLATGLRICEALALSWSDIDFVNNTVSVSKTLIQYSNEIQDSAKTKESNRLVSVDSETISMLKEWRKHQNYGAISLHDSLVFSYHQKMRTYELERQHLVRHFKKAKVPNIGFHGFRHTHASLLMNNDVNPKEIQMRLGHADYSFTMNLYSHLAKEKKKETAEKFANILKAL
1857283..1857305                   attR                                                                                 N/A                 AACGTAACTAAAAACGTAACTAA
