gi|00000000|ref|CP015909.1|  Lactococcus lactis subsp. cremoris strain JM4, complete genome. 2379714, gc%: 35.83%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
848929..848989                     attL                                                                                 N/A                 ACTCCCCTCGCCTCCATTATCCAGTTTATATAGAATCTTATAGACTAAGAAATCGCTCAAT
complement(849095..850174)         PHAGE_Lactoc_ul36_NC_004066: putative integrase; LLJM4_0825; phage(gi21716073)       0.0                 LactococcuslactissubspcremorisMEIKAYKKKNGTTAYKFKAYLGKKNGKSHYAEKSGFKTKADARAALHNIQEEIDNPTPKSSMTFKELYDEWLLVYEKEVQNSTYYKTTRAFEKHVLPVIGSTKLSDFTPMELQNFRNDLSEKLKFARKLFGMVRKVFNHAALLSYIQANPAAPVTSQGIKKKVEEKKDFYDTDELRDFMALVEKTNDIKKIALFRILAFTGIRKGELLALEWKDYRKSTLDINKAISHSPVGYEILPPKANSNRLLSLDEKTCKILDELHQTYPESTRIFESENGGMLSPSKPRKWLLEITKEKEIEPIRIHAFRHTHASLLFESGMSLKQVQYRLGHADLKTTMNIYTHITKFAKDKIGQQFSDYIDF
complement(850296..850874)         PHAGE_Lactoc_bIL309_NC_002668: Orf2; LLJM4_0826; phage(gi13095807)                   3.08e-134           LactococcuslactissubspcremorisMGFKELLKAKSFNEYFDAKKDHQKMEEIKNRTQTDVLKNAGASLIPSSISNFGFKLSKDSISKGFEKKPLNDVTARLESGSELQSRVTMTRLVALGVFAFAAKKKKGGEKYLTIEGPDFVWTAEVKRDKKDIDKAMKFINQVNTNSKIYSKSMQINSSTTSIADELKKFKELLDSGAISQEEFEIQKEKLLK
complement(850958..851770)         PHAGE_Lactoc_Tuc2009_NC_002703: cI2009; LLJM4_0827; phage(gi13487804)                1.77e-154           LactococcuslactissubspcremorisMIDYFRKENSWTMKEFGEKLGKSESAISKWIKGVRSPMVEDFDKMVNLFNTDPDTLMYGASDLSTTLSEINKISSQLEEPRQKVVLNTATNQLDEQNQEKKKESKVIPINKIPDDLPPYISRKILENFVMPTNTMEYEPDEDMVDVPILGRIAAGLPLDAVENFDGTRPVPAHFLSSARDYYWLMVDGHSMEPKIPFGSYVLIEAVPDVTDGTIGAVLFQDDCQATLKKVYHEIDCLRLVSINKEFKDQFATQDNPAAVIGQAVKVEIDL
852011..852190                     PHAGE_Lactoc_50101_NC_031040: hypothetical protein; LLJM4_0828; phage(gi100004)      1.98e-37            LactococcuslactissubspcremorisMEQVVTHYGETIQQHSVEWYKKQLLKDFSVQFIKDSLLPQLFEWSNAYKAAVELTNKKP
852211..852453                     PHAGE_Lactoc_r1t_NC_004302: repressor; LLJM4_0829; phage(gi23455723)                 2.88e-52            LactococcuslactissubspcremorisMAEKKTYEPLDELLDSSGMKYKVIAKKINVPYTTFYKWRINPSRIDAVSAANIAEVIGVDLTDVIFVLKNFNQKLDKLAS
852466..853290                     PHAGE_Lactoc_BK5_T_NC_002796: hypothetical protein; LLJM4_0830; phage(gi14251162)     7.09e-157           LactococcuslactissubspcremorisMNELQNFNFNNLPVRTVLIDDEPWFVGKDVAKILGYANTKDALLKHVDDEDKLGSQITTSGQKRNMVVVNESGLYNLILGASKQGKNQEIKEKARQFKRWITHEVLPTIRKHGAYMTDAKLEEVLLNPDTLINLATQLKEEREARLGLEKENSQLNLELAAATEKTTYLDLILESPDDILITQIAQDYGFSAVKFNRILNELRIQRKVNKQWVLYSRYMGKGYIGSRTQNYVDSKGQERTSITTTWKQKGRKFLYETLKKHGYLPLVEQDDLAS
853303..853593                     PHAGE_Lactoc_bIL286_NC_002667: Orf7; LLJM4_0831; phage(gi13095750)                   3.52e-66            LactococcuslactissubspcremorisMFEEMIQKLRDSVRGIVLDSMHDYISNDGKYPLALTQKQVMELIGCKDESTFSISFKKHLKFAEMNYGKSGTKWSRDLVIEWFKEPRNLQLQRRGK
853660..853896                     PHAGE_Lactoc_ul36_NC_004066: hypothetical protein; LLJM4_0832; phage(gi21716081)     5.91e-51            LactococcuslactissubspcremorisMETTIINGRKVRVLPTTVGQIYHDLIKRENRGVVVFETWERPDGSLYMTSRKKNKQELAADKTAMLNECISDWKKVWN
854001..854519                     PHAGE_Lactoc_Tuc2009_NC_002703: hypothetical protein; LLJM4_0833; phage(gi13487812)     2.94e-114           LactococcuslactissubspcremorisMTEEKEPFKVKNDSELNWVLGKYKEHQIQCDEYEIQAEESRKAIEEKYNAELYEIEQRRLKLQAEEQQKMDYFKGLAEQYYLTLETKSTKKTINGSVRFSKKENASYDDNLLSELKEKGFGKFITVKTKTTESVDKKALKAFVKDGGKLVSEDGEIVEGFKFDKTEEFTVKV
854528..855286                     PHAGE_Lactoc_ul36_NC_004066: putative translation initiation factor; LLJM4_0834; phage(gi21716084)     0.0                 LactococcuslactissubspcremorisMADYEEQMLALQKPLQPDRVVWRVQQSGFSKQGKPWAMVLAYMDNRAVQERFDEVFGISGWKNEFKTAPDGGTLCGISVKFGDEWVTKWDGAENTQVEAVKGGLSGSMKRAAVQWGVGRYLYDLPTSFAQTSLEKTDGWNKVFDKKAGKNFWWNNPQLPSWALPQNSKVQNTKSDFTEEEVPTPPKLYVVGKDKKEFDEKKLQAVVNKMAIIAGKDYGASVDEQNDWLKMPLDEAYNDIEKFVDIKKEEQND
855279..855704                     PHAGE_Lactoc_bIL286_NC_002667: SSB; LLJM4_0835; phage(gi13095758)                    1.34e-96            LactococcuslactissubspcremorisMINNVTLVGRITKEPELRYTPQNKAVAAFTLAVNRAFKNANGEREADFINCIIWGKSAENLANWTHKGQLIGVTGSIQTRNYENQQGQRIYVTEVIANNFQVLEKSNQANNERVGNPASKPQNNDSFGSDLMEISDDDLPF
855833..856615                     PHAGE_Lactoc_Tuc2009_NC_002703: replication initiation protein; LLJM4_0836; phage(gi13487815)     0.0                 LactococcuslactissubspcremorisMAQRRMFSKEVTTSDLFVDMPSSSQLLYFHLGMEADDEGFIGNAKMLSRAYGSNNDDLKLLEAKGFVIAFPSGVTVVKDWNLNNKIRKDRQKPTIYTEEKTLLSLDSKGSYLLGNQVSTIPQPNDNQMSAQDRIGEVRLGKDSIGKDSIDASQPNAFQEKSSGEDINSLLSEYLDSFIEFSSKNIAKRAMAQVEFMKLSSEEKKQAVIGAKNYFEWYKQENPEDKTKKFSINSYAFLESATFKSFQQKVKVKKETLGGLI
856615..857340                     PHAGE_Lactoc_Tuc2009_NC_002703: putative topoisomerase; LLJM4_0837; phage(gi13487816)     3.57e-176           LactococcuslactissubspcremorisMAFDTWRDDGEFAVKATDVLKNYQEGGELGACEVHGCEIIGSKKPVLSYPKNEKGEVIGEPYLYDVRVCPMCHAEGIKTVATKAVNDFLGEFKAKKGIDLTENVIVKYDFADELSVVSCDNMVKWIVTNVGRQKKVKRLKVRKYIHISENRFSSDEAREKYLKILHDIEEAEILIFDSLADFTANQAEKALTPLLSASDNCSIIMLTIPESDERLEQLPARLKFKLNNAQVMNFSSTGQQR
857337..858095                     PHAGE_Lactoc_Tuc2009_NC_002703: putative methylase; LLJM4_0838; phage(gi13487817)     0.0                 LactococcuslactissubspcremorisMKFEVYNDHFQNYKRYQIPKAQLVIADIPYNLGKNAYASSNAWYIDGDNKNGESEKANTEFFDTDKDFRIAEFMHFCNRMLIKEPKEKGKAPAMIVFCAFQQIQMVMDYGEKYGFKHAYPLVFVKDYSAQVLKANMKIVGATEYAVVLYRDKLPKFNNNGEMIFNWMPWGRDNKTIPKIHPTQKPQSVLKRLIEIFTDKGDTIIDPCMGSGSTIRASIELGRNAYGFEIKKDFYNLAKEKMLKEYEVSLFEI
858085..858474                     PHAGE_Lactoc_Tuc2009_NC_002703: putative resolvase; LLJM4_0839; phage(gi13487818)     3.18e-87            LactococcuslactissubspcremorisMKFKFELDKMPTTQQQKGIKKVNGKLQFYDRRGTNNYSLKAQLMKNKPKECFEKNVPLKLSVTFFYAIKQENRWWQWKTSRPDLDNLMKNLQDYMTKLRYYSDDSQIVWLEAKKVNDEKNRIEIEITEV
858478..858672                     PHAGE_Lactoc_r1t_NC_004302: hypothetical protein; LLJM4_0840; phage(gi23455734)      1.37e-37            LactococcuslactissubspcremorisMIKEIIVIKSEYEKLKDDNETMKKALKNIYNQPEDDGIISIEEYPSQIRYYAKESLEAIGENHD
858665..858904                     PHAGE_Lactoc_Tuc2009_NC_002703: hypothetical protein; LLJM4_0841; phage(gi13487819)     1.14e-48            LactococcuslactissubspcremorisMIKTNFDTLKKLYGLARNNNFNVNHKELSVKISGRTKHNHELSQLYLDICNKYNHSKQMKWGELYKILKELTKDKQIEL
859016..859195                     PHAGE_Lactoc_Tuc2009_NC_002703: hypothetical protein; LLJM4_0842; phage(gi13487820)     2.36e-35            LactococcuslactissubspcremorisMGYYDTKNEARRISKLASQNISSEQNKKEFELDSQSKFNQEMQAEFHEKIKKLGEKNGS
859185..859754                     PHAGE_Lactoc_Tuc2009_NC_002703: hypothetical protein; LLJM4_0843; phage(gi13487821)     3.96e-120           LactococcuslactissubspcremorisMVVKVFDAYIEGEKKATGTIDEIADYFDISRTSISLWIKNGKDPKKANPKYKHAILNKEKTKELTEQKKKEGRELPASVYDYYDKGEFIMTGTAREISQFLKIGKHNVYSYIQVGKYPFDYRKTRKHAILNEAETRKRFPFLSVSSEEELIETKEKERRKNETKEERRLRRNIRAQMAIENSRKEELGL
859765..860025                     PHAGE_Lactob_phiAT3_NC_005893: hypothetical protein; LLJM4_0844; phage(gi48697301)     2.44e-14            LactococcuslactissubspcremorisMKWTEKYKCGFSNGLGYATVEFLFDEKESDELKLAFQAYDANLCPLPDASTWNKKWLKKQTDFLNSAISKDFIGEVWLDDVLVRSV
860026..860232                     PHAGE_Lactoc_bIL285_NC_002666: Orf25; LLJM4_0845; phage(gi13095705)                  3.13e-41            LactococcuslactissubspcremorisMTVESLLKVIEEGMTVILKTEKNRIIVQFECGNDIEAFSCGFLYRKIKIIKIKNGSELIAVLEDTKND
860225..860854                     PHAGE_Lactoc_TP901_1_NC_002747: ORF19; LLJM4_0846; phage(gi13786550)                 9.23e-89            LactococcuslactissubspcremorisMTKFEEELFNKVKVTNIELTTEAEYKKSTLINHFKNWHSDEEFQELFDKYSNLNDNYEKEVIKSSKLESQIIVLKSQLQQQALPVVPECVADAIAWDEQIDNSIAETLKDIFTSNDKDLIEAGLWVKNNPEKYIIARNIGYTVEKPQLFYIDLPKVFGLSDSTFVSKAESGIISEFTKGKDYALKLTEQEIKSIDERYWQFAVPVEEEK
860851..861270                     PHAGE_Lactoc_Tuc2009_NC_002703: dUTPase; LLJM4_0847; phage(gi13487824)               6.79e-97            LactococcuslactissubspcremorisMTRGFKKLNENATIPERATKHSAGYDISASETVTIQPDEIKMVSTGLAVQLGDDEVLKLYDRSSNPVKRGIALINSVGIIDSDYYPQEFKGLFMNISKEPVTISKGQRIMQGVFVKYLTTNDDNANGKRTGGFGSTGEV
861275..861544                     PHAGE_Lactoc_phiLC3_NC_005822: hypothetical protein; LLJM4_0848; phage(gi45597409)     2.19e-33            LactococcuslactissubspcremorisMMKQTRCYGCGKPIEPEWLTEGEFIICDECYSDIDKLLVEKLQEQLNTAKKYIEHVIGTIKHDGHLGTIQTDWILPDLEKALAAIGGDR
861541..861855                     PHAGE_Lactoc_WRP3_NC_027341: hypothetical protein; LLJM4_0849; phage(gi849250904)     6.77e-09            LactococcuslactissubspcremorisMKAWIISNPWDDEGRQALTFADTRNEAKSHAGWFDNEYDWIGLRAIRAKTFDDMENLSEKELMRMQWHEDWWFEYGNDRLPHFDEEGVTEQTFDDWWSRTYGNE
861867..862256                     putative phage protein; LLJM4_0850                                                   N/A                 LactococcuslactissubspcremorisMSELEKTAQQIAAEALNFKSKAYYTIEQQNETIAANRKAFMKILSISSLTIPKSIADELEEEIEEAYSSDYIRSYSDVGACMEVITDGLDEESELYKFMFPDDALLGCSHRNIIYLYLVDNDLVKVGEG
862253..862579                     putative phage protein; LLJM4_0851                                                   N/A                 LactococcuslactissubspcremorisMKERIIVPELEERNKMREILEQILKEDVYDLAPEDEPDILENLRENLKLIGQDICKKNYIQEYRKRVTREFFKRIYKENEYIENICFCLEGYFEEEFDEDLFADEEQE
862576..862956                     PHAGE_Lactoc_phiLC3_NC_005822: hypothetical protein; LLJM4_0852; phage(gi45597410)     2.41e-68            LactococcuslactissubspcremorisMTDKLISLVNERGSGMTTEEIVQNYQVKLLKIIFKEIDSLMKKKEKADINASKLAKTSNTVNTSEYWKSVGNAEFYIKEIYQKLSALAEIDRLFHWSDRLHQEQLKFVGKYPNVMEKYRQTNIAGQ
862975..863205                     PHAGE_Lactoc_TP901_1_NC_002747: ORF25; LLJM4_0853; phage(gi13786556)                 6.34e-12            LactococcuslactissubspcremorisMKPIISKLFEEIDELEEELEYYSKRDMCHQAHFKRYQIVIRRDFIKKISNALNPQIPEPWASMSADEIIKGLGVYI
863600..863842                     PHAGE_Lactoc_KSY1_NC_009817: gp023; LLJM4_0854; phage(gi157311026)                   8.29e-33            LactococcuslactissubspcremorisMDKDFNKLVTQKLAEKLGCETQDIYVVWQCKTLQNIKGLFSSDVEAANGMYYEATYNGNKGELYLDSYKKLENEVIKVKF
863923..864345                     PHAGE_Lactoc_Tuc2009_NC_002703: hypothetical protein; LLJM4_0855; phage(gi13487827)     2.42e-98            LactococcuslactissubspcremorisMADKLDRIIGDYVNGRLEARIKSIESRYLYKQKVDNLGIRTAYSGGSEPESHVLNKEALENDEELIRLRELIRQIDIWYLPLIQVEKEVIRLKCEGYNGRYWYQVMQELDVQGFEVPQKKAKAAYYKFRNDIYSFVIHLI
864716..865126                     PHAGE_Lactoc_TP901_1_NC_002747: TerS; LLJM4_0856; phage(gi13786561)                  2.00e-96            LactococcuslactissubspcremorisMPVLENARHEKFVQCLISGMSQRKAYREAFKQSSKWKDSTVDVKASELFGKVLVRYKELQEEAQDAAIMTRKERMVTLSEIAKNAEKEADMIKAIDTLNKMDGDYTSKVELSGSVKTNPFVDLSTEELRKLASRDG
865119..866507                     PHAGE_Lactoc_TP901_1_NC_002747: TerL; LLJM4_0857; phage(gi13786562)                  0.0                 LactococcuslactissubspcremorisMDKIALGAKIELSKRFFFDYCNLIMPSFYKPDRAYLVTMCEEFQSFLNDDEYDVLVLNLPPRHGKSLTLGKFVEWVLGNDHTKKIMTGSYNETLSTVFSKNVRNTLQEEKADENKIVYSDIFDAAIKYGDAAKNLWSLSDGYNNYLATSPTGTATGFGADIIIIDDVIKNAEEANNATVLEKHWDWFVNTMLSRLESGGKIIINMTRWHSEDLAGRALRELPKNGYRVKHINFKAFNEQTNEMLCDDVLTLEDYKRKVKTMGADIASANYQQEPIDVKGRLYSEFQTYNARSEYKKIWNYCDTADTGKDYLCSIVWGETTDGFADVLDIIYTQKPMEYTENAVANQLINNRVNASRIERNNGGRSFARSVRDKIQGKVACAVEDFFQGNNKEARIYSNSYWIEQHVRFPNDWRTRFPEYYQAMTTYQREGKNKHDDAPDATTGIAETMTTRKAKLKSFKGGF
866508..867866                     PHAGE_Lactoc_ul36_NC_004066: putative portal protein; LLJM4_0858; phage(gi21716109)     0.0                 LactococcuslactissubspcremorisMKYKPPKLMTFSKDEPITVEVVTKFMEKHKLEVARYEYLKNMYLGIMAIDDEPAKDSWKPDNRLAVNFTKYIVDTFTGYFNGIPVKKSHSDKEILTKLQEFDNLNDMEDEESELAKMACIYGRAFEFLYQDEDTQTNVVYNSPENMFMVYDDTVKQEPLFAVRYGVDEDKKLQGEVYTLLETIKISGENDEISFGEGTYNPYPDLPVVEFYFNEERMSIFESVISLVNAFNKAISEKANDVDYFSDQYLTFLGAAVEEEDLKNIRSNRVINYYADGEGKNVDVKFLEKPDSDSQTENLLDRLTKLIFQTTMVANISDESFGSSSGVSLAYKLQAMSNLALSFQRKFQSSLNSRYKLFCELSTNVSNKDAWKDIEYTFTRNEPKDIKEQAETANILMGITSQETALSVISVIPDVQAEMEKIKKEEASTAIFDQDKQPSEKGTDTVVSETNEE
867870..868910                     PHAGE_Lactoc_Tuc2009_NC_002703: hypothetical protein; LLJM4_0859; phage(gi13487833)     0.0                 LactococcuslactissubspcremorisMKTPDYWKKREKAWQEQQIKDDTKRMKQIMDKLFEAQEAIQKEINANWQNVANGQGISISEAMKRADKMDVKAFANKAKKYVEEKDFSHQANQVLKLYNLTMRVNRLELLKANIGLELIAVFDDLDKYFSKNLTGAALAEFERQAGILGLSVPKNGYNSLVESVLNGSYKVEGFASFSDKLWQYQFELKADIEKLLIRSVTGGINPKALAPQLKRLMTEKGKLNATYNAQRLLVSETTRIQTAIQEESYKKADIESYEYIAEPSACPICGALNGKIFKLKDMSPGINAPNMHPFCRCSTAPHVDDKGFWDDLLDRKVISQDEYKQAFDDRTEADKAIEELRNKRKG
868956..869288                     PHAGE_Lactoc_Tuc2009_NC_002703: hypothetical protein; LLJM4_0860; phage(gi13487834)     6.49e-74            LactococcuslactissubspcremorisMAKDDFFYISYKILAYLYHAMKKGEKIDPGVFDPQNYRVSYPYLNDILEELKENGYIKGVSFIETKDGKLITGLSDIKITIKGIEYLDDNSMMKKAYKTLKELKDWIPGT
869412..870074                     PHAGE_Lactoc_Tuc2009_NC_002703: minor structural protein 2; LLJM4_0861; phage(gi13487835)     2.45e-141           LactococcuslactissubspcremorisMEQTELLPLNLQLFAEEAADETSEVGSETETETNVEDQQEQSTDNDKIVEKLQKRIGKEQAEKNETKTQLDQALARIEELEKGGKKSVKEKSDEEKAAELQKAKDDEIASLKAQIKISNITSQADEVLKESGIALSAAELGLLVDVDEEKTYSNVKTFLNLLDNQRSQWEKARNTGTTPKRVPGNVISVDKEKFDSMTYAEKAELAKSNPDEFKKLTGGY
870076..870894                     PHAGE_Lactoc_Tuc2009_NC_002703: major structural protein 4; LLJM4_0862; phage(gi13487838)     1.55e-146           LactococcuslactissubspcremorisMSKQKTTLTDLVNPEVLAPIVSYELNKALRFAPLAQVDTTLQGQPGNTLKFPAFTYIGDAADVAEGGEISLDKIGTTTKSVTIKKAAKGTEITDEALLSGYGDPIGESNKQLGLSLANKVDDDLLKAAKTTSQTVSTKANVDGVQAALDIFNDEDAQAYVLIVNPKDAAKIRKDANAKNIGSEVGANALINGTYADVLGAQIVRSKKLAENSALLFKIVSNSPALKLVLKRGVQVETDRDIVTKTTVITADEHYAAYLYDLTKVVNITFTGV
870894..871094                     PHAGE_Lactoc_Tuc2009_NC_002703: hypothetical protein; LLJM4_0863; phage(gi13487839)     8.60e-40            LactococcuslactissubspcremorisMGRLLSRHLHKYENINATKQVKNDELTTLTVNQLKELLETKGIEYTKNDKKEDLISKLGVAYGYHL
871078..871410                     PHAGE_Strept_9874_NC_031023: hypothetical protein; LLJM4_0864; phage(gi100009)       4.19e-72            LactococcuslactissubspcremorisMAITYEIKKLLGGSSDERLEIIEKRTRERLLLILGSDLKEVPPELEYVVLDVSLKRFNRIGQEGMQSYSQEGLSMTFSESDFDEYADEIESWRKSRETEGDKKIGRFRLY
871407..871718                     PHAGE_Lactoc_Tuc2009_NC_002703: hypothetical protein; LLJM4_0865; phage(gi13487841)     7.40e-70            LactococcuslactissubspcremorisMRYLDEVTFIKGSPDSHYDPDLGEWVEKEPTRAVFSANITDIGTDRSVEVFGDIKQGAKVMRMMPLFTMPEYDYIEFDNKKWVLMTYRNPSKRNTFILQEVNQ
871715..872041                     PHAGE_Lactoc_Tuc2009_NC_002703: hypothetical protein; LLJM4_0866; phage(gi13487842)     1.17e-71            LactococcuslactissubspcremorisMKITGIDALQKKLRKNATLDDVKYVVKSNTVSMNKNMQKLAPVDTGNMRRSITSELTDGGLSGTTGPHTDYAGYVEYGTRFQAAQPFVKPAFNIQKKVFTNDLERLTK
872038..872427                     PHAGE_Lactoc_Tuc2009_NC_002703: major structural protein 2; LLJM4_0867; phage(gi13487843)     2.90e-89            LactococcuslactissubspcremorisMIKTRDQSIFDELFKRVQSLGYTVYDYKPMNEVGYPFVELENTQTIHEPNKTDIKGTVSLSLSVWSLQKKRKEAADMASNIFNQALNISATDGYSWALNSQASTIQMLDDTTTHTPLKRALINLEFRLR
872438..872947                     PHAGE_Lactoc_Tuc2009_NC_002703: hypothetical protein; LLJM4_0868; phage(gi13487844)     1.90e-105           LactococcuslactissubspcremorisMAELTAKQGKDIILLYRVLSKASKEAAWKLAFQTEHSNEKTRDYNTTATKDGPIGALAEVEYSLSAKSIAANGDPHLDEMDKAFDDAEIIEVWEIDKAEKATLGLDNGKYKAKYLRAYLTSFSYEPNSEDALELSLEFGVFGKPQKGYATLTTEQANVVQYVFKDTVTG
873063..873413                     PHAGE_Lactoc_ul36_NC_004066: hypothetical protein; LLJM4_0869; phage(gi21716119)     1.71e-75            LactococcuslactissubspcremorisMELTINDKQYVFIFGYRFIKELNKKNEVTERGMTLKAGLDNALMNFFSGDIETLVEMLKTANATENPRVSEKGIVEWIEENGIDALFDLVLEELKKSEFTKKKTLNFEKEVSKNLQ
873455..873766                     PHAGE_Lactoc_ul36_NC_004066: hypothetical protein; LLJM4_0870; phage(gi21716120)     5.60e-58            LactococcuslactissubspcremorisMRYLRIANLRDIERMTISEYELRLKAYRLKRLDEQEFIYQQAWANWQVQSTKQQGKKQVPVYSTFKKFFDKEKFENDILGIETSDSAFKKDNKLINLMKKANK
873782..874906                     PHAGE_Entero_vB_IME197_NC_028671: tail length tape-measure protein; LLJM4_0871; phage(gi966199024)     4.21e-133           LactococcuslactissubspcremorisMESYSVEAVLSAVDKNFTSTMNKADSSMGGLDKRSQNTNTSILEIAKGVGVFKLVDSAVGLVRNSLDGAIDRFDTLNKYPVVMQALGYSASDVDKSMAKLNKGIDGLPTSLDEIVSSTQQLAISTGSLTKGTDTAIALNNAFLASGASTADASRGMQQYVQMLSKGTVDMQSWRTLQETMPIAMDKVAKSFKDQGVNSVSDLYDALQSGKITFDDFNSRLIKLNGGVGGFAELAKKNSAGIKTSFKNVKTAVVKGLEHVLSAIDNGMKSAGLGSIAQNFDKLKTVVNQVFSAITKAIPPVISVIARIIDTFKTLFEFVNQNKDWIGPLVAGITAGVAAYKLWKSAITAWNTVTKIATAVQVAVKGHLKMLVLGH
complement(874955..875713)         PROPHAGE_Escher_CFT073: transposase/IS protein; LLJM4_0872; phage(gi26248359)        5.72e-44            LactococcuslactissubspcremorisMTTYHQLLNQLDHLKLDRVRQLLPEFLDEHADISLVEGLHELLSEELREREALLQERRLKKAHLPYEKRVMDFDFQFQPKINKAEILDLHTLRFLDKHENLLFIGNSGVGKTHLAISITLEALEKGYSSYFCMSTELVDRLLRANQKGTLERVLKQYANYDVLVIDEVGYLPFSRDGASLLFQLINMRYEKKSTLITTNIPLSQWSEFLQDKKLTNALLDRLVHHSKVISITGKSYRMKDYSEKKTKTPKSK
complement(875725..876948)         PROPHAGE_Escher_CFT073: transposase; LLJM4_0873; phage(gi26248360)                   1.39e-31            LactococcuslactissubspcremorisMRKDILESITEHLMTGIKPNFADIARRYNCDYRTVKRYYDLGKEKTLEEASKRRVPPSLIENYKSIIEDKLKLGCSVRSIYYFIQLKGYQGSYTTVKRYARLIRESCKHKATIRIETTPGLSAQVDWKENLKLISRNGEVFTINIFLYILGYSRMKYLQLTVDRLQPTLFECLNHAFEKFGGVPEEIWFDNMKTVVDHSKSQFSNVVFNERFRQYAKDAGFKPIACRPFRPQTKGKVEALARTVDRLLVFNNEFEDLEELQALVQQLMEDLNHKEISQAIGTSPSERLDQEALNLKAFDLELLKVYSQLSVPLTRKVSKEALVIFEGRKYSVPVKYIGQTVTCEKEQEDLKVYCDQRLIARHPLSDRPFNYRREDYVEILKSDVFKHLEEDELEAYVDENLQAYDLL
876992..878575                     PHAGE_Strept_9872_NC_031094: hypothetical protein; LLJM4_0874; phage(gi100015)       0.0                 LactococcuslactissubspcremorisMARFLHFSMALYKVAFNAVMDANPIMLIVIAIAAVVAGLVYFFTQTKTGQQIWSNFVKFLGSAWQSLVKISKDVWDNITKAWDSAVKWFSDTWNNIKNGAKGLWDGTIQGAKNAIDSVKNAWNGIKEWFANLWKGTTSGLSSAWDSVTTTLAPFVETIKTIFQPILDFFSGLWGQVQTIFGSAWEIIKTVVMGPVLLLIDLITGDFNQFKEDFGMLWQTLATAIQTIVQTFVNIVVGFYSSFFQTVVNIWTTIVNTIQSLWGAFTTWVVNMAKSIVDGIVNGWNSFKQGTVDLWNATVQWVKDTWASFKQWVVDSANAIVNGVKQGWENLKQGTIDLWNGMINGLKGIWDGLKQSVSDLIDNVKTTFNNLKNINLLDIGKAIIDGLVKGLKKKWEDGMKFISGIGDWIRKHKGPIRVDRKLLIPAGKAIMTGLNSGLTGGFRNVQSNVSGMGDMIANAINSDYSVDIGANVAAANRSISSQVSHDVNLNQGKQPASFTVKLGNQIFKAFVDDISNAQGQAINLNMGF
878585..879346                     PHAGE_Lactoc_Tuc2009_NC_002703: hypothetical protein; LLJM4_0875; phage(gi13487848)     0.0                 LactococcuslactissubspcremorisMYKFRDTTKQNHYRNLPFIPTSAMSYDGTWLEELIEGYQTLTVEGREMYSLSFESQEMQVGGVITNVKYPPRELTIKYKLEDRDPRALQEKFDTLKAFLIRQEDVPIIFNDDLEYTFYGRFKTADNVAGDTNSIISSFTVLCSNPFKHGKTQSVKNKVIEVLPYPVKPDRLSFKLLTGGLLATDGNYRLKSSQAKKGDLLEFDFQAGNTFLNGKVNNNLLDLDSDFKNIRLTTGTDFSSSNYELTIQYRKAVL
879346..882102                     PHAGE_Lactoc_Tuc2009_NC_002703: minor structural protein 3; LLJM4_0876; phage(gi13487849)     0.0                 LactococcuslactissubspcremorisMSNILFLDKMQQVIKSYDSDEFIECVQTKEITTNASELMNDTLSVSLPFDETIKDASYIAVNDTKEQEFSLYRILTAKDEDDLLSFEAKNFAVDELDNFIIKDIRPKNRSFSYVINKLLYDSDCDWVLGVCEPIKTVSSTFYYTSIREALKALQELGAEFTFSIEITGNKITKKIIHCYNQIGKITNKRFEYGEEVLKIVHQQDRTNIVTALIGRGKGEEVGDGYGRRIEFSDVEWKKSNGKPLDKPKGQNWIEYPEMTKEYGIPSNGKMLPRKTVVVFDDVEDASELLQKTYDQLAYYCRPLVQFSTEILGSDSIGNTVSIHRGDRNYHYQTRVFKVVTDHVNGRVQASLGDNLSGNSINRQLSQVQSNISDLDNNKMTFYDSTEIGKYQSDIIRGAKGGSIMMMNPSDLGKGESREPFQMVWMNGPSIEESDHFLVANSEGIGFIDGNFNLDNFKTAWTIDGIFNADFINAGTLQGVKIRSVDNDFIIELDQGKIRFIKKDGSSEKEMFAFAPTYAGGQLQGINAIQNHGYSFALSSKGNNGALLNVLEIPKDSTAENRKLNLYGEVKVDGNLTISGKTNTKELYVNGTKIDTNGGGNSGGGDNGWNGQYPPEVISDRDKRYWQIWAMAIGAGFSKQAAAALLGNAQGESDANPTADEGGGRPGFGRGVWQWTDSSGASSGRVYMINLMTRAGVTDNPDTITAQFKLLMWHAQNGQWIAKSSYPYSWTQFMTLTNINTATQAFVSNFERPLNGHPERSTWAQEWYNKFVNLGIPSGGGGYIAPISSPITVTSEMGWRTSPITGAQEFHNAMDLVNGNPTTPILASNDGQVVQAGSNYYNWYGNYTVIKHADGLYTGYAHQSRIDVSVGQNVKKGQQIGLMGSTGPVTGPHLHFQFMDQYWPSSHAHFKNPRDYIKF
882115..883095                     PHAGE_Lactoc_Tuc2009_NC_002703: minor structural protein 4; LLJM4_0877; phage(gi13487850)     0.0                 LactococcuslactissubspcremorisMTEHFITLSTTEPNNNIGIVKLRHADVNSQAIVAQIVENGQPKSFEGLQPFFCLMAQETTGQGVAEEAVISFDAKNGTLKYVASDNALQMVGRNEAYFSFRKQEGSQWIEQFSTRTFHYIVEKSIYSQPFKDSNYWWTFKELYRIFNKYIEDGKNSWVQFVEANREILESIDPGGRLLAEVLDLNKIIYRKVPSGFNVVIEHDSEYQPNVKVTYYKNSIGIEANGFDTGPVFGGERIYNLASSLSYIRNKVNVELPSVYAMAGEVVNNGNELLLINGTEVMRFVIEGATITKGYVEKVKPPTNLIVSDITSSSAKISWENGGQYGR
883085..883870                     PHAGE_Lactoc_Tuc2009_NC_002703: minor structural protein 5; LLJM4_0878; phage(gi13487851)     9.23e-77            LactococcuslactissubspcremorisMADKNYLHTAYANSADGTDGFTTTFPNLNLLEGTKDFSGDWLNLGTWYKNGTYRGLTVMSFNTGWNGGLTKGFTIPSDGIYSMSMLVKVKAGSIGKFVIETTGMDSIIRDVNPTDEQFVTQSYTGKFTAGQKILMYFRFNDDKNIIKDGLSVAGHKIEQGSTVTPWMPSSSEVTTADWPKYVGTYVDTNPVSSTNSSKYDWDEMKYRVYLDGVPVGGSKLLSFDLENLKAGTSYNVQVSQINGNVESDKSESVAFKTTLTK
883889..884380                     PHAGE_Lactoc_TP901_1_NC_002747: BPP; LLJM4_0879; phage(gi13786580)                   7.06e-113           LactococcuslactissubspcremorisMASIKKVYRGMQNGAETINDDLEAINSELTSGGNVVHKTGDETIAGKKTFTGNVEVNGSLILPTKSWHGELGGGIILSLRKKGTTVEYSIGGEISSSILANSNLVNLSVPNEFCPRNRCSLVGHMVGGWNAFHIDIPSSGVCQWFGPTASSGTPRGTGTYPID
884394..884618                     PHAGE_Lactoc_63301_NC_031017: hypothetical protein; LLJM4_0880; phage(gi100045)      4.09e-46            LactococcuslactissubspcremorisMEEQAWREVLERLARIETKLDNYETVRDKAERALLIAQSNAKLIEKMEANNKWAWGFMLTLAVTIIGYIITKIL
884631..886994                     PHAGE_Lactoc_bIL286_NC_002667: Orf59; LLJM4_0881; phage(gi13095802)                  0.0                 LactococcuslactissubspcremorisMSLDNFKKQTITWDMINQAFEQPIQIMEGDVNARTLLLKITDNGSVLDLTGYSVKLTYQYMYKSQSGFIMLTPNDISKGEFTLIIPTEMTVSGLIKSNLILLNEDKEQVIVSKNLTFISDDSTVTSLTQEVNNKIDDFTKLLLENMPQVMRSELNDLHAQTESNKSNIELKANLADMTSLQSAMTDLKNEVESFGISHENLVTIKSLLDAIASNASESEVVELINSVKILTSNISLMSNGDYSPKANQTDLESLQHTVNNQSATVSTKANQTDLDNLQAKVNQSETDAKTAITKATEAQANSLPLNGNAVSASKLETARKLRVNLQTLAYQNFDGTADVTNIGIVGALPIVNGGTGNSSAYAYGLNCNINTTDFSSGMKIYTRAVNTKQANMFILQSVWAKNAPAVGVYIVICSVTNYSANGNMSMTALANGTIYTATVPYTYTEPTTTTQAIYTTTATPNWVKVLNENGNAVSASKLETARKLGVNLQTSVYQNFDGVSDVTDVGVSGVLPIANGGTSTNDGVINTIAYANSADGTDGFTTVYPNLNLLDGTKDFSGNWLNTTPWYKNGTYRGLTVMSFNTGWNGGLTKGFTIPSDGIYSMSMFVKVKAGSIGQFIIESTGKPAIIIDVTDTEGKFVTQSYTGTFTTGQTVSMYFRFKSSEMVIKDGLSVAGHKIEQGSTVTPWMPSSSEVTTADYPKYVGFSNIIKPNKKSSDYKWLPMGLVSIDSATGSLKPAVIGIDCAQAHPVGSVVTNNSNLSSGYSTGTWENIGSAVISSTTIYYWQRTA
887019..887285                     PHAGE_Lactoc_63301_NC_031017: hypothetical protein; LLJM4_0882; phage(gi100047)      1.18e-56            LactococcuslactissubspcremorisMNQINWKLRLKSKAFWLALLPALFLLIQAIGASFGYKWNFVILNQQLAAVVNAAFALLAIVGVVADPTTSGLGDSDRVLNKDKSEENK
887282..888571                     PHAGE_Lactoc_50101_NC_031040: hypothetical protein; LLJM4_0883; phage(gi100049)      0.0                 LactococcuslactissubspcremorisMKKLIKKAAIGMVAFFVVAASGPVFAAVGDQGVDWSVYNGDYGNFGYGHDKFAFSQVGGTYGGSFVDQATYETQVASAIAQGKRAHTYIWYQVGGSQEVAKAALDRYLPRIQTPKNSIVALDYEGGASGDKQANTDAILYGMRRVKAAGYTPMYYSDKPYTLAHVNYKQITKEFPNSLWIAAYPNYEVTPVPNYSFFPSMDGISVFQFTSTYVAGGLDGNVDLTGITDNGYGKQKGQEVKPNTATPAIENGKEANEVKGNDVEVGMTVKVNFGAKNYATGETIPQWVKGQPHKIIQKNGDAVLLDGIMSWLSVHDVETIDASTSQPTTPAKSYIVKQGDTLSGIASNLGTNWQELARQNSLSNPNMIYSGQVIRFTGGQYGATARTYTVRSGDNLSSIASRLGTTVQSLVSMNGISNPNLIYAGQNIVY
888881..889765                     PHAGE_Clostr_phiC2_NC_009231: putative abortive infection bacteriophage resistance protein ORF 37; LLJM4_0884; phage(gi134287370)     3.66e-11            LactococcuslactissubspcremorisMKISDTDVKKIENIGYYRLKEFAHPLSTIVKKDGVSNIDYNGATFKEVISRYYQDKNLRIYLLHAIEKIEVSVKTKLSYILGEQYGAFGYLDFSKWGNRQEFSKFAMQEREYRFKRNLKNSMRKTSLADARNKRNQDSDGFPTVWLAIHILMFGELVNVIEVLSKKNQRLLASEYNCSAIEFVSWMKTLHFIRNVCAHNSNIIDIQIKTEAVYKPEWNKFLFIFENKGGGNKPTNRLAVVLLILRHFIDVINPKYNWWDVKQSIWRLAANKDRKAQLLGFKDLKSLKDFNRLKC
890049..890109                     tRNA                                                                                 N/A                 GGTTCTTTAGCTCAATTGGTAGCTAACCGTTCGGTCGATGGTTCGAGTCCAGCAAGAACCA
890177..890237                     attR                                                                                 N/A                 ACTCCCCTCGCCTCCATTATCCAGTTTATATAGAATCTTATAGACTAAGAAATCGCTCAAT
890483..890743                     PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; LLJM4_0885; phage(gi48697273)     1.86e-13            LactococcuslactissubspcremorisMQKGYSKEFKETLIAFYHSGQSVTQLSKEYDVAPATIYKWIDLYSKSNESSVSKADFLELKRQLAKVKEERDILKKVLTIFAEKKK
890755..891594                     PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; LLJM4_0886; phage(gi48697274)     2.27e-56            LactococcuslactissubspcremorisMAQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLVQKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKKNKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRMTVELVQRTLNKAIKSQDYPEAVILHSDQGSQYTSLEYEELLKYYWMTHSFSRRGYPYHNASLESWHGHLKREWVYQFKYKNFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA

#### region 2 ####
complement(1369452..1372592)       PHAGE_Synech_S_CAM1_NC_020837: recombination protein; LLJM4_1368; phage(gi472339556)     5.86e-08            LactococcuslactissubspcremorisMKPTYLEMNYFGPHEKSIVDFRLLDESPIFLISGDTGAGKSTIFDAMTYALFGTTTGDRDAKEMRSQFATPDNLTSVVFYFEQGDLLYKIERKPEQNIAKKRGSGTTIFKATAKLAIVDRVAGIEKANIAAIPKNVGEEITRLLHLNAEQFKKIILLPQNDFSRFLKSSTSEKESILKKIFGTSIFTAFSNAIKLQNSEINAIFAEYERKLQSYYESQIWNSFELERLEVVPEHEKFNEMLLLKEERTKVKEETISKNLEQKEKVTLLEDSYKIALNLYNDFKNLSKLESDYQEKIIEQSQSYNKNLKHFEELTWAQPLKQSLHELEQDKKRSKDLEIKITDMTTKTLTEEKLLQNLLTENEHLSEQQQRINDQKSESESLITQIQQAFEDEKKQAKIVDLRNKQSETQQSLKNSKDVLIEFNQEILKLRENIISDSYFSEKKEEINQLKLTFQGKLLPDFQRISWLEKENLDLSNKLESTKKEQSENKKHLNDVQMAHEEKIKGRRRLMIAQLQAELEENEPCPVCGALEHPSVDGIENISYEKLGILLKEIDESQKLLATLLEKNKQLNQLTSEITNNLVSKSAEKEQAIKNFSLLYREFISNYSDIFPSAFDEFVIEGLIQNLESALIKEEAENNQLKIKLTDLEGKYLGLQEEVKKLENTYLEFSTQIENLLTEIRDSAVTQTSEYLQDKRNKLKEEIALFEKRLADLTSKISEIKISVATKKANLKSLNIQLIDLSERIKNNQDKIDKTLLQPEALTTDFQVLWEWANDDKWLELSQKVEQYKSEKSRLEQEIESLHKKLQNKARPNLEEIENRKKQETDLYLSLQKKLAADETAEQQAIVILSEVRKLMKGQEKQFEKRKAIGQLYGAISGKLSEDKLRLETFVVQNYLEKILDYANIHFINQLSNNRYRFELSEEGNNRRMDHGLDINIYDNETGASRSADTLSGGETFIAALSIALALSEVVQNTANGVQIEALFIDEGFGSLDQETLQKAMQALEQIGKNRLVGVISHVEEMKSTIGQQIIIKKVGDGRSKVKSVIK
complement(1372595..1373767)       PHAGE_Bacill_Evoli_NC_024207: hypothetical protein; LLJM4_1369; phage(gi643217535)     1.17e-13            LactococcuslactissubspcremorisMKFLHTSDWHIGRTINGFSLLEEQKYAFKQILSLAKEYEVDGIIIAGDLYDRAVPSADSVITFNQMLREMNIIEKFPIYAISGNHDGAKRLNYAKEWLDFNQLHLRTSLEEAFIPIETEQVQLFLLPFFDPMDARIYFSSQGLDEEKVKEIKTIDEAMTLVISEMQTHFDKNKKQILVTHFAVSPHKEEINLTSETTSKVGGLATLNVIQFKAFDYVALGHIHTRFASPSEKVQYSGSPVKFNTKEAKTQKGVFIVETQQDSVSSEFIPLQIQTDLVVIEEEWDTLISREFYENQPIHQAWFAITIKNFDRAKLAGQNLRAQLQKVYGTIVELDYKFKNISSVKSKTQNIESLDNIGILSNFYEVTTGETLSGLQQEIIENTFKQIEGEK
complement(1373913..1374851)       (R)-2-hydroxyisocaproate dehydrogenase; LLJM4_1370                                   N/A                 LactococcuslactissubspcremorisMRITIAGAGAMGSRFGLMLHKGGNEVTLVDGWLEHVTAIKEHGLQANFNGEEITAHLSVELQSNISSEEKTDLIILFTKAMQLDKMLQDIKPLIAEHTKVLCLLNGIGHEDIIEKYVSKNNIFIGNTMWTAGLEGPGKAKLFGNGSVELQNFIPGEEETAKKLANILSASGLNANYSDNIYYSIYRKACVNGTMNGLCTILDTNMAGLGATKPAHDMVVTIVKEFAAVAKHEEVNLDIDEVVEHVETCFDPETIGLHYPSMYQDLINNNRLTEIDYINGAVSRKGKKYQIATPYCDFLTQLVHSKEELLKAK
complement(1375049..1375423)       PHAGE_Bacill_G_NC_023719: gp564; LLJM4_1371; phage(gi593778007)                      1.84e-09            LactococcuslactissubspcremorisMRQWLIANKLEFTEVSILENSLFKNDILRILSLTESGVEEIISKRSSAYKKLSKILDFDSLTLNELVDLIVKNEKLLRRPLVIDDYRLQVGYNEDDIRKFLPRKVRQLGLMEAIENVRLWDQAK
1376260..1376520                   PHAGE_Shigel_SfIV_NC_022749: ISEhe3 orfA; LLJM4_1372; phage(gi557307550)             1.72e-05            LactococcuslactissubspcremorisMQKRYSKEFKETLIVFYHSGQSVTQLSKEYDVAPATIYKWIDLYSKSNESSVSKADFLELKRQLAKVKEERDILKKVLTIFAEKKK
1376532..1377371                   PHAGE_Shigel_SfIV_NC_022749: ISEhe3 orfB; LLJM4_1373; phage(gi557307549)             1.06e-44            LactococcuslactissubspcremorisMAQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLVQKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKKNKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRMTVELVQRTLNKAIKSQDYPEVVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYHNASLESWHGHLKREWVYQFKYKNFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA
complement(1377382..1379025)       PHAGE_Lactoc_SL4_NC_028900: putative major capsid protein; LLJM4_1374; phage(gi971754181)     6.82e-11            LactococcuslactissubspcremorisMTLPGSVGPNAPLNVTATDSSGNVSTPTPTKTPADPVSPVLVAPTGNLTATTSAVGASNATATIPTTLKNSAGADVAVTSVITNSSGTAVTNGNLSAGTYTVTYTAAGYEDVTQTLVVSDPADTTAPDAPVVGSVTGNSTNGYTVTGTAEPNSTITIKNNNGDTVGTGTTDGSGNYTVTLPGSVGSNAPLNVTATDSSGNVSDPTSATTPADPVSPVLVAPTGNLTTTTSKKGAADATASLPATLKDSDGKTVPVTHVITNSTGTEVPNGKLSAGTYTVIYSAEGYANVTQTLVVSDPSNPTSPVLVAPTGNLTTTTSKKGAADATVSLPATLKDSDGKTVPVTHVITNSTGTEVPNSKLSAGTYTVTYSAEGYANVTQTLVVSDPSSNTDTTAPNAPTVDSVTGDSGSGYTVNGKGEPGSTITVKNPATGEVLGTAVAGVDGSYTLKLPLGINPGTQVSVTATDASGNTSEPTLFTTPPTTMNGGMINGNMSTNIGGKHFSTADLPATGEANAGWLSMVGTVLLSLFGAMFFLTLSQFFRVTNVEF
complement(1379022..1380452)       PHAGE_Lactoc_SL4_NC_028900: putative major capsid protein; LLJM4_1375; phage(gi971754181)     2.06e-11            LactococcuslactissubspcremorisMEMQKKKAPRKKGKVITKRKVLSATMSGTLLMTSVIIPTAYSLLSNQITAKAAALNIDLLQNITSSNNSGTTTSNRWASGSGTRNVDFTIAGGALANVALLSGPRYAVLTIPQELRGYVAANGNTSVTTNITIDFNKVALINAIVSAGDTFVAGVATILGNNPLASINLTEVTTQLNLLKGSQNIGGGTFTSATTLNGNSVLSAPLNDGMGAILAQNVRTILENLRTAVSNLSATGLAAPAANTALALIKPALITAIDNVLVPLVNGTGGILDLLLNASALGNTRITIPTKITAPPSIQSNLDARFVGSAVQTNLLDVDVLSGADGVSYVYLAGDVNLTLVAPTGNLTATTSAVGASNATATIPTTLKNNAGTDVPVTSVITNSSGTPVTNGQLSAGTYTVTYSAAGYANVTQTLVVTDPADTTPPAAPIVSGVTGNSTNGYTVTGTAEPNSTITIKIVLVQQSEQEQQTEVEITQ

#### region 3 ####
complement(1611467..1611814)       PHAGE_Lactoc_bIL310_NC_002669: hypothetical protein; LLJM4_1598; phage(gi13095864)     3.99e-07            LactococcuslactissubspcremorisMVLKQEDLQESCDSMEKFAISNDQEFLEILYNYALNPNIKDRERKIVQLGRKELENKVYSLSVANRMVASFQREAISSRLSKDTSVLYNSLKDYISKNIPLGTPRVAGINAGYDL
complement(1611777..1612001)       hypothetical protein; LLJM4_1599                                                     N/A                 LactococcuslactissubspcremorisMVTTNKKSAPKKEPQFTKIMNSANGYLAYDNWNKKYMYHVTKDPVSAVAGVLANGWGSAGAGFGPQTGGPSGKL
1612421..1613116                   transposase for insertion sequence element IS982B; LLJM4_1600                        N/A                 LactococcuslactissubspcremorisMAQSLFPNFLEYSRFVRRCNALLPSIQVIRQALVFKEVEGISVSIIDSFPIPLCQPIRNFRSKGLGDYANVGYNATKGQYFYGCKCHALVSESGYVIDYTITPASMADSSMTEEVLSQFGTPTVLGDMGYLGQSLHDRLELKEIDLMTPVRKNMKQKKILFPNFSKRRKVIERVFSFLTNLGAERCKSRSPQGFQLKLEMILLAYSLLLKSAKSLEPETLRYSIGYQVMAK
complement(1613098..1613298)       hypothetical protein; LLJM4_1601                                                     N/A                 LactococcuslactissubspcremorisMSESKIKEEKVLALKAIEKQTEAYKNLAEIINKELESEGELSDKSSKRLKDYIEKPELLVDYLAMT
complement(1613618..1613678)       tRNA                                                                                 N/A                 GGTTCTTTAGCTCAGTTGGTAGCTAACCGTTCGGTCGCTGGTTCGAGTCCAGCAAGAACCA
1613835..1613848                   attL                                                                                 N/A                 TTGATAATATTTAA
complement(1614526..1615815)       PHAGE_Lactoc_ul36_NC_004066: putative lysin; LLJM4_1602; phage(gi21716129)           0.0                 LactococcuslactissubspcremorisMKKLIKKAAIGMVAFFVVAASGPVFAAVGDQGVDWSKYNGTYGNFGYAHDKFAFSQIGGTYGGSFVDQATYETQVASAIAQGKRAHTYIWYQVGGSQEVAKAALDRYLPKIQTPKNSIVALDYEGGASGNKQANTDAILYGMRRVKAAGYTPMYYSYKPYTLENVNYKQIIKEFPNSLWIAAYPNYEVTPVPNYSFFPSMDGISVFQFTSTYVAGGLDGNVDLTGITDNGYGKQQGQEVKPDTATPAIENGKEANEVKGNDVEVEMTVKVNFGAKNYATGETIPQWVKGQPHKIIQKNGDTVLLDGIMSWLSVHDVETIDASTSQPTTPAKSYIVKQGDTLSGIASNWGTNWQELARQNSLSNPNMIFTGQVISFTGGQSGATSRSYTVRSGDNLSSIASRLGTTVQSLVSMNGISNPNLIYAGQTLNY
complement(1615812..1616030)       PHAGE_Lactoc_Tuc2009_NC_002703: holin; LLJM4_1603; phage(gi13487855)                 3.66e-36            LactococcuslactissubspcremorisMARFLHFSMALYTIGAPFGYKWDFVILNQQLAAVVNAAFALLAIVGVVADPTTSGLGDSDRVLNKDKSEENK
1616074..1617297                   PROPHAGE_Escher_CFT073: transposase; LLJM4_1604; phage(gi26248360)                   1.43e-31            LactococcuslactissubspcremorisMRKDILESITEHLMTGIKPNFADIARRYNCDYRTVKRYYDLGKEKTLEEASKRRVPPSLIENYKSIIEDKLKLGCSVRSIYYFIQLKGYQGSYTTVKRYARLIRESCKHKATIRIETTPGLSAQVDWKENLKLISRNGEVFTINIFLYILGYSRMKYLQLTVDRLQPTLFECLNHAFEKFGGVPEEIWFDNMKTVVDDSKSQFSNVVFNERFRQYAKDAGFKPIACRPFRPQTKGKVEALARTVDRLLVFNNEFEDLEELQALVQQLMEDLNHKEISQAIGTSPSERLDQEALNLKAFDLELLKVYSQLSVPLTRKVSKEALVIFEGRKYSVPVKYIGQTVTCEKEQEDLKVYCDQRLIARHPLSDRPFNYRREDYVEILKSDVFKHLEEDELEAYVDENLQAYDLL
1617309..1618067                   PROPHAGE_Escher_CFT073: transposase/IS protein; LLJM4_1605; phage(gi26248359)        5.72e-44            LactococcuslactissubspcremorisMTTYHQLLNQLDHLKLDRVRQLLPEFLDEHADISLVEGLHELLSEELREREALLQERRLKKAHLPYEKRVMDFDFQFQPKINKAEILDLHTLRFLDKHENLLFIGNSGVGKTHLAISITLEALEKGYSSYFCMSTELVDRLLRANQKGTLERVLKQYANYDVLVIDEVGYLPFSRDGASLLFQLINMRYEKKSTLITTNIPLSQWSEFLQDKKLTNALLDRLVHHSKVISITGKSYRMKDYSEKKTKTPKSK
complement(1618191..1618370)       PHAGE_Lactoc_TP901_1_NC_002747: ORF16; LLJM4_1606; phage(gi13786547)                 5.58e-34            LactococcuslactissubspcremorisMTAFRIIPTVKLFNLANKEREDGYGSNSVYITVRTKGSHELVEIYRDIKSVFNNGKDMT
complement(1618371..1618790)       PHAGE_Lactoc_TP901_1_NC_002747: RUS; LLJM4_1607; phage(gi13786546)                   1.92e-99            LactococcuslactissubspcremorisMKFEFELYRAISKSKDVPKSKKLILNSNDRMHFHQKAKIIQELKRITFNQVRNPLNSLKKLPLFDSTRTCSVTLTVFTPTKRRSDPDNLQPTLKAIMDGFTESGLWSDDNHEVVKFTKYQYGGLSGTKAYRLEVDIEEV
complement(1618780..1618944)       PHAGE_Lactoc_BM13_NC_021861: hypothetical protein; LLJM4_1608; phage(gi526244831)     2.69e-32            LactococcuslactissubspcremorisMKTIIIEQWENEHYPLGRIKKQKLAEKSEHEIIFILNRMAQMPAIVRFGEASEV
complement(1618953..1619843)       PHAGE_Lactoc_BM13_NC_021861: putative helicase; LLJM4_1609; phage(gi526244830)       0.0                 LactococcuslactissubspcremorisMESIGDVIGKFVDMNKFNAMTDKVIACPEIEKFISDNKMTSDEVSKSYSKFYEYLKEKNKFDNNEKTALSGHEPFLIMNCGYADVVYRETEEVIKRRKKAEFVKRLNRNSIVRDMTIKKASFENFNAVTDEEKRALAFAKEVSEYYYTGGEGNTVVSGPAGTGKSHLAMSILKDCLQHTDLTVIFASWSEVLHLIKDSFDNKDSFYSTEYFMEVFRNTDLLVIDDIGSEKITEWSMSLLTEVLDARTKTIITTNLKSDEIRKKYHNRTYSRLFRGIGKKAFNFENIKDKRVSQLPF
complement(1619853..1620659)       PHAGE_Oenoco_phi9805_NC_023559: replication initiation; LLJM4_1610; phage(gi589286176)     4.95e-51            LactococcuslactissubspcremorisMVEISWIKLSVNIFDDEKMKLIDEMPENDAIFRIWVYLLSLAGKTNDSGLVYLSNHIPYTDEMISALCNRPVSTVRLALKTFRDFGLIEIYDNNMIGISNWEKHQNIDGMEKIRKLNAERNKKYRERKKLIENSDVSMTSRDATEEDKNKSKNKKKNNNTMSDKSDNVIPYSEIISYLNEKTGRSFRTTEAHKRFIKARWNEDYKLDDFKKVVDNKVADWTGKTINGQPAEKYLQPSTLFGTKFDNYLNQTPMRQEQAQPYDDLGLPF
complement(1620787..1621212)       PHAGE_Lactoc_ul36_NC_004066: putative single stranded binding protein; LLJM4_1611; phage(gi21716085)     2.60e-94            LactococcuslactissubspcremorisMINNVTLVGRITKEPELRYTPQNKAVAAFTLAVNRAFKNANGEREADFINCVIWGKSAENLANWTHKGQLIGVTGSIQTRNYENQQGQRVYVTEVIANNFQVLEKSNQANNERVGNPAAKPQNNDSFGNDPMEISDDDLPF
complement(1621205..1621963)       PHAGE_Lactoc_ul36_NC_004066: putative translation initiation factor; LLJM4_1612; phage(gi21716084)     3.00e-179           LactococcuslactissubspcremorisMADYEEQMLALQKPLQPDRVVWRVQQSGFSKQGKPWAMVISYMDNRAVQERFDEVFGIAGWKNEFKTAPDGGTLCGISVKFGDEWVTKWDGAENTQVEAVKGGLSGSMKRAAVQWGVGRYLYDLPTIFAQTSLEKTDGWNKVFDKKAGKNFWWNNPQLPSWALPQNPKVQNTKADFTEEEIPTPPKLYVVGKDKKEFDEKKLQAVVNKMAIIAGKDYGASVDEQNDWLKMPLDEAYNDIEKFVDIKKEEQND
complement(1621972..1622370)       PHAGE_Lactoc_ul36_NC_004066: hypothetical protein; LLJM4_1613; phage(gi21716083)     2.81e-33            LactococcuslactissubspcremorisMELQLVPLDNETGEVLQLNPEMLKKFDNSTLTNLLSATKGIDKLKKEAEKEVKKRLDEGQLFSRLSYSKQQYTRVLAMDNAAKMALIRKYGLDSVVPLTINQLEKKYGESVYEDIQPYIVENRKAQSIKWDA
complement(1622468..1622704)       PHAGE_Lactoc_ul36_NC_004066: hypothetical protein; LLJM4_1614; phage(gi21716081)     9.64e-49            LactococcuslactissubspcremorisMETAIINGRKVRLIPTPVGQIYHDLIKRENRGVVVFETWERPDGSLYMTSRKKNKQELANDKAAMLNECISDWKKVWN
1622807..1623085                   PHAGE_Lactoc_ul36_NC_004066: hypothetical protein; LLJM4_1615; phage(gi146334931)     4.21e-62            LactococcuslactissubspcremorisMSVKVHFSNGESIVISEETRISAWNSLDKDPDGYYAEGVFSGSNIDSPDLGTSYQHIGLMGLFGSTDWFAIGLDFKTTYKTSAIVSLEETPW
complement(1623040..1623273)       PHAGE_Lactoc_ul36_NC_004066: hypothetical protein; LLJM4_1616; phage(gi21716080)     4.69e-49            LactococcuslactissubspcremorisMNKEIEKLANNYKEIINKTSDLALKQNDGDIRKARKWLKEQLFYTADRATNELIKLSIDNILDYHGVSSNETIAEVL
complement(1623427..1623663)       PHAGE_Lactoc_PLgT_1_NC_031016: prohead core protein protease; LLJM4_1617; phage(gi100061)     1.61e-16            LactococcuslactissubspcremorisMEYKDDDYLTTQQVAEKFSIHDQTVYRRRKAMELFPQFKSGIFMNGRRFRYKEIRDFMQFVNTPEYKQELKKRQSVIK
complement(1623676..1624401)       PHAGE_Lactoc_ul36_NC_004066: putative anti-repressor; LLJM4_1618; phage(gi21716079)     2.91e-152           LactococcuslactissubspcremorisMNQLITITQNENNDQVVSGRELHEFLGVKTPYTQWFKDMCKYGFIENIDFVLVSEKSETNNPRNPFTTIINHALKLDVAKEISMIQRNEKGKQARQYFIEVEKELKQQLLPQTPEQQIALLAQGNVNLNKKVEQIENSVLDLTDRFGLPSNKAKVLQKKVASKVYMFTGGKYSNAHKKLGAKVFREFYKDLNNRFDVVKYSDIPLSRYDEATEYLDMWQPSFNTTLEIRGLNSQTSFDFEE
complement(1624415..1624654)       PHAGE_Lactoc_50101_NC_031040: hypothetical protein; LLJM4_1619; phage(gi100005)      9.69e-16            LactococcuslactissubspcremorisMAVEKELIALRKDYKISQKQISKAIGLSEEQYRRKELGQYDWRATEMFAIRNYLKPFIGPRSLNDIFYGKTTQNVYKAS
complement(1624995..1625198)       PHAGE_Lactoc_50101_NC_031040: hypothetical protein; LLJM4_1620; phage(gi100004)      5.00e-33            LactococcuslactissubspcremorisMEQVVTHYRETIQQHSVEWYKKQLLKDFSVQFIKDSLLPQLFKWSNAYKAAVELTKQKAPRGAERVV
1625461..1626273                   PHAGE_Lactoc_63301_NC_031017: hypothetical protein; LLJM4_1621; phage(gi100002)      2.40e-135           LactococcuslactissubspcremorisMDDREINKFVGMKIKEFRKNKKLTQQDLADLVGVKNSAISNYEQGIRIPKRDFLFRVANALGVSIDEFFPIQSEETSSTLSEINKISSQLEEPRQKIVLETANHQLDEQIKKKRLSFFSNKVDFDKISNIVPYDPNKEWYAPVIGEIAAGTPILSEQNFEGMRPVYGKYAGRDDIFWLRVKGESMETEIHDGSFALILQDPDLSEGSIGAVRFIDDNEATLKCVFYEYDENGYPLCLRLEPLNPDYPIQYADEYNPAVIEGRLVKVEQDY
1626323..1627456                   PHAGE_Strept_phiBHN167_NC_022791: phage integrase; LLJM4_1622; phage(gi557745680)     3.70e-68            LactococcuslactissubspcremorisMWVEDLANGKYKYCERYTDTKGKIRKVSVTLDKNSSRAQNEASRLLYNKIDAKLEKEKQKIEDEQNKIASITFWEVQDEYFSIYEETVKAKTASLRDTAKKKIRSLVSEETLLSDVNSVFILEILEKLYYKENYSYSYIKTLKASFNMVLDYAISKEYLAVNPISNVKIKKKVLTLEQREKKKEKYLERSELKQVIKDMAVIDKSTSLLIEFMSLTGLRFGECVAIQIKNIENNVLHINGTWDSVSNSKTTTKNIYSDRKITLPKRCLQIIEEYPLKYPKDKISKDNYIFIYKNNKPYNISVVNSRLKKINSAKNLSTHIFRHTHIALLTELGIPLKSIMEKVGHNNPQTTLSIYSHVTEEMSKNIIEKLNEIDLLN
1627499..1627512                   attR                                                                                 N/A                 TTGATAATATTTAA
complement(1627647..1628621)       monosaccharide ABC transporter substrate-binding protein CUT2 family; LLJM4_1623     N/A                 LactococcuslactissubspcremorisMKLVKKLTFALVATLAVSTLTAFSLYTGIPGRDGKEKVEEVAHKKANELNIGVSISTMNNPYFVSMNNAIKSMAKEKNTKLTVSDAQNDSATQLNNVQNFISQNVDAILINPVDYDAIVSAIKAANNAHIPVIAMDRGANGGTVLTTVASDNVAAGKMAAQAVEKLVGKNVKVLELSGTPGASATIDRGKGFNSEAKTLGLNILSSQSANFDRTTGLNTTQNMLQSHKDGQAIFAQNNEMALGAAKAVQASGQKIAIFGIDGESETHDAIKAGTMTATIAQQPAKIGEMALQATYDYYQGKKIDHIINSPIYLVDKDNVDEHKW
complement(1628633..1628845)       Ribose ABC transporter permease protein; LLJM4_1624                                  N/A                 LactococcuslactissubspcremorisMYAIAAVVLGGTSLMGGKGRMFGTMIGVLIIGVLNNGLNIIGVSAFWQQVIQGLVILVAVLIDVIRSKRK
complement(1628803..1629582)       Ribose ABC transport system, permease protein RbsC; LLJM4_1625                       N/A                 LactococcuslactissubspcremorisMSVKVLAQKFSSLTTMIALIVLMIIITCINPNFMTANNLLNLLLQVTANGFIAFGMTFVILTSGIDLSVGAILALSSAVSVGFIAQGMPLPLAVLCALIIGAFLGAINGALIAYGKLAPFIVTLATQMVYRGATLVFTDGNPITKHMDGYFLAYIGQGYLLGIPFPVILMILVFIILWILLHKTDFGKSVYALGGNEKAAYISGIKLNKVKIAIYTLSGAMSAISGLIISSRLSSATPQEQVLVMKCTRLLRLSSVERL
complement(1629579..1630712)       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; LLJM4_1626; phage(gi371496158)       3.34e-12            LactococcuslactissubspcremorisMRKKATFAFEQLGVTIDLDKEIGNLSVGQQQMVEIAKSFLSDLKILIMDEPTAALTERETERLFSVIAGLKAQGVGIIYISHRMEEIFKITDCVTVMRDGLVIDTKKTKETNVDELVRKMVGRSITDYYPQKNAEIREIVFEAENLSTADFKNISFSVRSGEILGFAGLMGAGRTEVMRAIFGIDKLKSGTIKINGKSLTINNPAQAIKAGIGFLTEDRKDEGLVLDFSIKDNITLPSTKDFIHHGLFDDKTATTFVKQLSERLNVKATDEEQMVGSLSGGNQQKVVLAKWIGIAPKVLILDEPTRGDDVGAKREIYQLMNELAERGVPIIMISSDLPEILGVADRIAVMHEGKIAGFLNKKEATQENVMQLATGGK

#### region 4 ####
1936725..1936736                   attL                                                                                 N/A                 TAATAAAAAAAT
complement(1951546..1952703)       PHAGE_Bacill_Bp8p_C_NC_029121: putative tail lysin 2; LLJM4_1952; phage(gi985761436)     1.06e-18            LactococcuslactissubspcremorisMQMFSLKYKSKKYKLIIYLFAGFILFLIMVIASLTGGLSQNDCDNNTISITANSASQKENAKVIYDFLVKNYGATPQGASGVLGNLQQESQLDPKSIERPADTLSGHGLAQWTAGRTTNLMDFAKSKNKEWDNLGLQLEFLDSELKGSEKQAIPALKALSVEQATIDWQKLFERAGKPVLSNRLNYANKWFAQFGTSDPISANAQDNASNGAIENVALNCGSLNDTGSSSDLVKSAKTMKGYFYYVQAHPSSDLGTDFKNPNKSGGTDCSGFIWLAMNKSGYKVPANMGWFTGSMASDARGSHQYLKEITPSQAKAGDIVIVNQGIGAGNNGHTAILLENWHGKETKIIQEGGDQTGHVNEGQFGTSFSILLDGGDVVLARPVAK
complement(1952705..1952974)       hypothetical protein; LLJM4_1953                                                     N/A                 LactococcuslactissubspcremorisMQDAQSVQTKLFGLDETKGDYLKSMIDLKTATDKVKDSQKKLDEANKIDNKDKSKGDKVKVAKSNLDSAKKDETLAKDKVDSLKNKVGA
1953059..1953739                   PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; LLJM4_1954; phage(gi985761246)     3.68e-89            LactococcuslactissubspcremorisMNYFKGKQFQKDVIIVAVGYYLRYNLSYREVQELLYDRGINVCHTTIYRWVQEYSKVLYHLWKKKNRQSFYSWKMDETYIKIKGRWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLHKQFGQPRVIVTDKAPSIGSAFRKLQSNGLYTKTEHRTVKYLNNLIEQDHRPIKRRNKFYRSLRTASTTIKGMETIRGIYKKNRRNGTLFGFSVSTEIKVLMGILA
complement(1953812..1953985)       PHAGE_Lactoc_bIL286_NC_002667: Orf56; LLJM4_1955; phage(gi13095799)                  1.27e-32            LactococcuslactissubspcremorisMKSTFYANIELGGEITQVSFEATSASDVIEQIWRTFGISTPIIEIWAEVTDDDSSKQ
complement(1953985..1956147)       PHAGE_Lactoc_bIL309_NC_002668: tail protein; LLJM4_1956; phage(gi13095855)           0.0                 LactococcuslactissubspcremorisMAKEKIAGTLATNIGVNTTNAVTSIESLKNSVKDSTNAWKQMESQMKLSGDTLGASKAKYEGLSDSLSKQKSVLERLKQEQSEVNRSTSDGEKAYQKYASQITQAEVKLTALNGQQDKAKQAYEYQKSGLAKLNEEVQHSNKLTEERVKQLEAEGKTEEANKAKIDGLKSAQEKYSQILKIQKTELEKLGESGDKNSKAYRLQEVRVAQMSTKVSEATRDIKRLNGTEIKPRTEGIGKVKSQLRSLNGLLGRTQSRFKDVFLGNILASGVIGAIGDIKSKFTGALEAGVEYNKEMQNLSVSLNNFTNGNQKLNDSLVDNIKNLREESGYSIDTLSLLTKKTYGLEGSADGAKKLSDAFVNLGRATGKSDDAMQNIITKFTQMNASGEITSGSITKMEKTLPGFAKTLSTTMGVSRDKLNELAKDGKISMSDLSKTIENMSAAKPKGLENYLTSFDGFSAHLQEKYQSLSGKITEGFFKTNNNFLKNMSKSLDGEETEKAFTHIGDSANKAVTTISTAFSSVFKGTKNPLADFANGLANEIEKLGNFISKHANDIKNFFGMVKDLGGAAFKLIGDTLKTVLPWLENFGTWASKHPEDVKKIALAIIGLNIALKGTLGTAVSGIVTLLDYTDPLTCTIDSTAGSIFKNGSGTTTLTCRVFQSGAEIDTAGTTYTYKWSQRDQNGVLNANFGGTGNQYKTGKTISVAATDINVKAQYTCEVNQ
complement(1956353..1956697)       PHAGE_Lactoc_bIL309_NC_002668: Orf49; LLJM4_1957; phage(gi13095854)                  1.20e-69            LactococcuslactissubspcremorisMEIKIKQLKKTVEVKASIKNLKKSYKFAKNMAEAEEKISEGNDELVLDYLDSIIEFVSDIAKLSKKEKEELEELEMEELMEVVSYIVAKLQGASDSDIKKAKENGEVGLAQESE
1956718..1956731                   attL                                                                                 N/A                 AAATAAAAAAGCGG
complement(1956757..1957362)       PHAGE_Lactoc_bIL309_NC_002668: Orf48; LLJM4_1958; phage(gi13095853)                  6.09e-138           LactococcuslactissubspcremorisMAIVGLKKSYLGLIDKKTGKIIAGPEGLTTDGLYISNPKDYGTASANITNIAAAGTQKFGDNGLVDVVSSKSFPQVAAVWNNLPFAIKAKIKGEVSDKKGGYVQSQDLPQVALIIESELIDRSHSIFYAFGNGHMTETALNIQTDNTAQNRVEDALTYQSLAFAAWNNQGMKTFNSADPGFDKVAMLKEVMGGYAGSGLGV
complement(1957364..1957759)       PHAGE_Lactoc_bIL309_NC_002668: Orf47; LLJM4_1959; phage(gi13095852)                  7.34e-92            LactococcuslactissubspcremorisMRPTQEVSQIVGAFRPSWLVFENFIPKEHVNDLDNTQVLLTEFKSDITNYGDGTFNSVVLAVTIQIFYGFNLSESMLLAEIELMEKLKDSGWLTISSEPHYLDVSTNTTKQQTKKNITVEKIVEINELKGE
complement(1957756..1958238)       PHAGE_Lactoc_bIL309_NC_002668: Orf46; LLJM4_1960; phage(gi13095851)                  9.45e-113           LactococcuslactissubspcremorisMEEKQLFEDIMNGIIFQAESVSTSLTVEDKAKITKAGANAFARGLEKVTKDKHYRIRKTGENPHLADSILVQNTNIDGIKDGNSTVGWDYTKSRVGHLIENGTRFPMYSKKGTKYRKGGQVAITSDPFVSSYRDGMEAQVAIFSAEAEVFSEILKKKGAE
complement(1958238..1958573)       PHAGE_Lactoc_bIL309_NC_002668: Orf45; LLJM4_1961; phage(gi13095850)                  1.90e-71            LactococcuslactissubspcremorisMAQLNLADFNKKVQLEDVKTLTNEYTGAGYDGFVPALTVWFASKTRTLSQSYQLQGTALENSRTIIIRHNSSAEKLKVAEIDNVQYDIVNYSPDETSNIIRYDYLTLKRSS
complement(1958560..1958865)       PHAGE_Lactoc_bIL309_NC_002668: Orf44; LLJM4_1962; phage(gi13095849)                  6.38e-67            LactococcuslactissubspcremorisMALITAQELLDENHIDSNYDEIATMNRLIHDASALIRGSISDSVTDEQIMDNLPDQYNRAISALATRLYFSRDLSDGYGMGIQIMINQIRARMWEVLNGTT
complement(1958876..1960189)       PHAGE_Lactoc_bIL309_NC_002668: capsid protein; LLJM4_1963; phage(gi13095848)         0.0                 LactococcuslactissubspcremorisMKIEKLKKDLATKTAELNAKKAEIRSFTDSEDKTIDEVKAGMAEIKEKEDEIKEIRSNIEVLEQASALKVEEKRDDSDLVAPELEKNSADNEEDDPEKLKTETKSEAEKDKNTVKDEEKRDAGGLQDMKLKVGGETADKKVAAFADYLKTGEVRNVTGIALNDGKVIIPQTILTPEKEVHQFPRLGSLVRTESVTTTTGKLPIFNNSTDLLTAHTEYGQTTKNTTPVITPILWDLKTYTGSYVFSQELISDSSYDWQAELQSRLTELRDNTDDSLIITALTDGVKKTSSTDLLGDIKKVLNVTLKPQDSAAASIVMSQSAYNLFDMATDAMGRPLLQPNVTAATGYTLLGKTVVIVDDKLFPSANAGDVNIVVAPLKKAVINFKLTEITGQFQDTYDVWYKQLGIFLRQNVVQARKDLIVNLTGKLKEVKVIQSTAV
complement(1960179..1960766)       PHAGE_Lactoc_bIL309_NC_002668: protease; LLJM4_1964; phage(gi13095847)               4.22e-141           LactococcuslactissubspcremorisMENIEYRYFDSTELETRSPTNTGFIGQIAGYAIKFNTPSTAMAPFIEYVAPTALDNVDLSDVLALYNHDYANVLGRVDAGTLKLSIDKVGLHFVLDMPDTTVGHDVYNNIKAGNLKGMSFGFYVADGGDSWQQGADSPIRIINQLQTLSEISVVSRPAYDDTSVQVTRSMDAFLSERTRKYKEKVKIYLGGLNEN
complement(1960766..1961845)       PHAGE_Lactoc_bIL309_NC_002668: portal protein; LLJM4_1965; phage(gi13095846)         0.0                 LactococcuslactissubspcremorisMSILNPFERRSSITPNNYYPFMVQNGSIVPNSLVDATEALKNSDLYAVTSLISSDIAGTRFTGNQVFTSVLNNPSHLTNAFSFWQTAILNLLLNGNVFLAILKGDNSLMKELRLIPSNAITIDLTDNTLTYEVNQFDDYPSAKYNASEMIHVKIMAYGVDTLHNLVGHSPLESLTSEIGQQKEANRLSLSTLKGALNPTSVVKVPQGTLSSEAKDSIRNEFEKANGGNNSGRVMVLDQSADFSTVSINADVANYLNSMNWGRTQIAKAFGVSDSYLNGTGDQQSSLDQIKDLYVNALNRFIEPLISELRIKCDSSIGVDMSPITDYSNSVFKADILNWVKEGIIEPTEAKNLLESKGII
complement(1961842..1962006)       PHAGE_Lactoc_bIL309_NC_002668: Orf40; LLJM4_1966; phage(gi13095845)                  2.13e-28            LactococcuslactissubspcremorisMKNLITYLPALLVFVGFLFVSVGVFIINVPIGLIVSGILLFALAYMYSSKGGHT
complement(1962015..1963826)       PHAGE_Lactoc_bIL309_NC_002668: terminase; LLJM4_1967; phage(gi13095844)              0.0                 LactococcuslactissubspcremorisMDNYTDLIGRPDDPALSYAIGVLNGTIISGEKIKQACKRHINDLRRIGKDDAFIYIYDSEQAKKIVEFSTLLKDVTSGEPFEASPYQKFILASVQGWRNPETKGMRFKTIFISMARTNGKTQVLATYALYNFLFGSPKINRQLAVSSIDIAHTHNLFNYMRFNWIQLKDGVFKKLAKALDINDNSQVMEIKKQSAVMKKLSAQGSPADSDHYTTGIVDEYHLFGQKQRDFISSMTSGMVNNPLAQMFFISTAGVDPTVPMFEDYKRYSKMLESGDWSSSEKDLVLIWEQDSEDEAYLIETWPKSNPLMEIESMRKNLTEGMITERDSLNSQGRIRDFYVKNMNLWQNAKKNAYLPLDLVQDAIIDEFDYFGRDVFIGFDYSQTNDDTSLAFVFPHSGSKFHLYQHSWIPIAKAGSIEAKEQRDNIDYRAVQEKGFATITRDRFGLIDEDEVFNWMLNFIEKNELKVKAILYDQWGTGNFIRRLDEVKEEYLLIPVRQGIKSLNEPTKFLQSSFIKHNIKMLDDQALIQGLVNAVTVSDNNGIKLDKNVNSQKIDAADAIVNALYEGQFYFNDFTNVEEKKTNSPFGNMNDEEISDYFINGFSF
complement(1963826..1964278)       PHAGE_Lactoc_bIL309_NC_002668: Orf38; LLJM4_1968; phage(gi13095843)                  1.09e-108           LactococcuslactissubspcremorisMAKKSFKDINDGRLSYQPPDHLGRTAKQIWRRVVLFLETQKPVERIDQTLVEMYCTQYEIYRNSYEHLKKHGEVQEIYKPVQDMTGEIIDRQFQGFKRNPMTQIYSDAIKNLTKIGSELGLSPKSRSELMGLNMQEDEEEIDWTSKFGGG
complement(1964394..1964897)       PHAGE_Lactoc_bIL309_NC_002668: Orf37; LLJM4_1969; phage(gi13095842)                  2.45e-119           LactococcuslactissubspcremorisMRLHRCANVGCRELIPLKHNYCQKHYDECLGNYINQRAESKAKASLTLRGQRNQAEQNREYDQTRRKELHNGFYQDKRWSKVSEYVKARDGYVDAIEGKAWDKGDLIADHIIPRRLLSGMEQYNTDNLWLLTKSQHNKKTAIENKLSDQQLKNVGRDWWKKVLKNKK
complement(1965131..1965553)       PHAGE_Lactoc_bIL309_NC_002668: Orf36; LLJM4_1970; phage(gi13095841)                  3.25e-67            LactococcuslactissubspcremorisMADKLDRIIGDYVNGRLEARIKSIESRYLYKQKVDNLGIRTAYSGGSEPESHVLNKEALENDEELIRLRELIRQIDIWYLPLIQVEKEVIRLKCEGYNGRYWYQVMQELDVQGFEVPQKKAKAAYYKFRNDIYSFVIHLI
complement(1965633..1966472)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; LLJM4_1971; phage(gi48697274)     2.42e-56            LactococcuslactissubspcremorisMAQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLVQKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKKNKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRMTVELVQRTLNKAIKSQDYPEAVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYHNASLESWHGHLKREWVYQFKYKNFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA
complement(1966484..1966744)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; LLJM4_1972; phage(gi48697273)     1.86e-13            LactococcuslactissubspcremorisMQKGYSKEFKETLIAFYHSGQSVTQLSKEYDVAPATIYKWIDLYSKSNESSVSKADFLELKRQLAKVKEERDILKKVLTIFAEKKK
1966824..1967159                   hypothetical protein; LLJM4_1973                                                     N/A                 LactococcuslactissubspcremorisMDYTEFRKYVEENTRAQGKFLEKATIYLLDKNVSRQSSAKWPDSRIEKEANKMWDMNISGAFISVSEGIKNAENKPRFHNHEEQVSYWINFMNEYEFLENFTDSIDDMEFE
1967226..1967672                   PHAGE_Lactoc_bIL310_NC_002669: integrase; LLJM4_1974; phage(gi13095863)              1.30e-45            LactococcuslactissubspcremorisMNIKEVQKKDGTTVYKVNVYLGVDSLTGKQVRTTVTAKNRKTCENKAHQAMNKFIKNGSTVAREKVSFDNFNALATSWFDSYKLTVKANTIRINSNFLKNYILPALGNYKVEKITTVLLQNIVNDWARNANTAEIVVKGHLKMLVLGH
complement(1967721..1968479)       PROPHAGE_Escher_CFT073: transposase/IS protein; LLJM4_1975; phage(gi26248359)        5.72e-44            LactococcuslactissubspcremorisMTTYHQLLNQLDHLKLDRVRQLLPEFLDEHADISLVEGLHELLSEELREREALLQERRLKKAHLPYEKRVMDFDFQFQPKINKAEILDLHTLRFLDKHENLLFIGNSGVGKTHLAISITLEALEKGYSSYFCMSTELVDRLLRANQKGTLERVLKQYANYDVLVIDEVGYLPFSRDGASLLFQLINMRYEKKSTLITTNIPLSQWSEFLQDKKLTNALLDRLVHHSKVISITGKSYRMKDYSEKKTKTPKSK
complement(1968491..1969714)       PROPHAGE_Escher_CFT073: transposase; LLJM4_1976; phage(gi26248360)                   1.43e-31            LactococcuslactissubspcremorisMRKDILESITEHLMTGIKPNFADIARRYNCDYRTVKRYYDLGKEKTLEEASKRRVPPSLIENYKSIIEDKLKLGCSVRSIYYFIQLKGYQGSYTTVKRYARLIRESCKHKATIRIETTPGLSAQVDWKENLKLISRNGEVFTINIFLYILGYSRMKYLQLTVDRLQPTLFECLNHAFEKFGGVPEEIWFDNMKTVVDDSKSQFSNVVFNERFRQYAKDAGFKPIACRPFRPQTKGKVEALARTVDRLLVFNNEFEDLEELQALVQQLMEDLNHKEISQAIGTSPSERLDQEALNLKAFDLELLKVYSQLSVPLTRKVSKEALVIFEGRKYSVPVKYIGQTVTCEKEQEDLKVYCDQRLIARHPLSDRPFNYRREDYVEILKSDVFKHLEEDELEAYVDENLQAYDLL
1969843..1970577                   PHAGE_Lactoc_bIL310_NC_002669: integrase; LLJM4_1977; phage(gi13095863)              1.89e-56            LactococcuslactissubspcremorisMLLNIIKRILDYGMQLGVISDNPAIKVFSPKLKTRTVKKIKYFNNDELKRFLDYLDSLQSTTANIKSTTLYKLLLATGLRICEALALSWSDIDFVNNTVSVSKTLIQYSNEIQDSAKTKEGNRLVSVDSETISMLKEWRKHQNYGAISLHDSLVFSYHQKMRTYELERQHLVRHFKKAKVPNIGFHGFRHTHASLLMNNDVNPKEIQMRLGHADYSFTMNLYSHLAKEKKKETAEKFANILKAL
complement(1970872..1971378)       hypothetical protein; LLJM4_1978                                                     N/A                 LactococcuslactissubspcremorisMVQENTKTETTEVKGNLAYEDKVIQKIVGLALESVNGLLAVDGGFFSNLTGKLVNTEDVTAGVGVEVGKKQVAVDLKVVTEYKKNVPDIYQKIKEVIRKEVSDMTDLEVVEVNVTVVDIKTKEQQKDDEKSLQDRVVGAAQTTGKFTSDQVDKVKEKVDDMGDDSCVK
complement(1971388..1971576)       hypothetical protein; LLJM4_1979                                                     N/A                 LactococcuslactissubspcremorisMDLFERYRYPIIGGIIGCIIAVCIFTIGFWKMILLFLLIGLGIFVGLYLQRTGIIEQIKKKK
complement(1971587..1972147)       hypothetical protein; LLJM4_1980                                                     N/A                 LactococcuslactissubspcremorisMSKGKKFIFILADLFFLTILIPILWDYFNQMNFRWELSPSSEIPYIGEKLPQYIFISASILGILLLFALLIVIFYPKTYMEILLDDKAGSLTLKRSAIEGLVRELVLDNGYIRNPKINVTLYQSTIKIDVQGEIIPRVEIVEKTKAIEQEIKESLKNFFGLNHEVKLKIKVSSIVEKKDSTSPRVV
complement(1972175..1972417)       membrane protein; LLJM4_1981                                                         N/A                 LactococcuslactissubspcremorisMIWSLIVGAIIGVIAGAITNKGKSMGWIANILAGLVGAAVGQGLLGTWGPKLAGMALIPSIIGAVIVVAVVSFFLGKANN
complement(1972653..1973624)       PHAGE_Prochl_P_SSM7_NC_015290: PRGA-formyltransferase; LLJM4_1982; phage(gi326784531)     7.91e-10            LactococcuslactissubspcremorisMTKTKIIFMGTPQFAATVLKGLIDSNQYEILAVVTQPDRKVGRKQELRMTPVKELALTVNLPVLQPEKLSGSVEMTQIMTLLESGEVGIVTAAFGQFLPGKLLDVARFAVNTHASLLPKYRGGAPIHYAIMNGEKEAGVTIMEMIRKMDAGDMIAQNSTPILEEDNVGTMFEKLAFVGRDLFLETLPKYLEGQLKAQAQNEDEVTFSPNISPEEEKIDWNKSAREIFNKVRGMNPFPVAHTLWNGERFKIYESKVADEIVNNSDNPLQAGQIVEKTKKSLKVATGNGILELLTVQPAGKPKMDIVSFLNGLGQKMQVGDKLGD
1982548..1982561                   attR                                                                                 N/A                 AAATAAAAAAGCGG
1985608..1985619                   attR                                                                                 N/A                 TAATAAAAAAAT

#### region 5 ####
2056184..2056195                   attL                                                                                 N/A                 ATCACTATAAAC
complement(2070306..2070626)       PHAGE_Lactoc_bIL310_NC_002669: hypothetical protein; LLJM4_2071; phage(gi13095890)     1.61e-52            LactococcuslactissubspcremorisMNELEFNIRLYLTGTMKSWTDRIDSTDQLTPQRFIFNAMTELFDSLSDDDLELIRLRYMERMTLSEVASRYLLHEHTIRNHTNPTIKQVKKIIKQGNELSTKQKSP
complement(2070727..2071056)       PHAGE_Lactoc_bIL310_NC_002669: hypothetical protein; LLJM4_2072; phage(gi13095890)     7.01e-06            LactococcuslactissubspcremorisMVRYYWGRPQDVVRWYLRGTLYLSAQSRKSYIEKTVAERGNLPRLLKLLDNLDELFDSVDTDSIAVLCLRYVELLSVAETTKRTGLLAYQITAKTGKVMKKAKEIISKA
complement(2071270..2071860)       PHAGE_Lactob_Lv_1_NC_011801: protease-scaffold-major head protein; LLJM4_2073; phage(gi219563201)     4.91e-43            LactococcuslactissubspcremorisMNKKTEINFGIDSKLEIRDANKKAGFIGQIAGYAIVFNKPSVPNAPFIEYIAPTALDNVDLSDVLALYNHDYANVLGRVDAGTLKLSIDKVGLHFVLDMPDTTVGHDVYNNIKAGNLKGMSFGFVVADGGDSWKQGASKPIRTINQLQTLGEISVVSKPAYDDTSINVTRSIKQFEDERTRKYKEKVRAYLDGLSD
complement(2071869..2072477)       PHAGE_Lactoc_bIL312_NC_002671: Orf18; LLJM4_2074; phage(gi13095909)                  9.14e-120           LactococcuslactissubspcremorisMQVKYIEEAKNKLEKQAKPLTQKVDKTNKLISELKNKIEKMENLSQNDDIDESLKALSELNNDKQLLETLEKRLAEEQKELDVFWSSQEVDDTIREAVSLADNLSNIELDLLKSTVSKDTKKKLKEYNKEVDDQRYRLQESGDYLLEKSNVYSRAELDNLISQKNRSHKNNFFFGIVRVMAGQYKKELMEFLKSEKILTDLD
complement(2072503..2072685)       PHAGE_Lactoc_bIL312_NC_002671: Orf17; LLJM4_2075; phage(gi13095908)                  2.18e-32            LactococcuslactissubspcremorisMSNETKKIEIPVAENERNKAVENLLSLKEYFDNQLQSDQETHQAIATLGDKLGVLWNADK
complement(2072892..2074526)       PHAGE_Lactoc_bIL310_NC_002669: helicase; LLJM4_2076; phage(gi13095886)               0.0                 LactococcuslactissubspcremorisMTDQLDKLVAETPQSNIRSPKPKIEDFTDYGEDGKKVINIAGYQENLKDWLEQEKEIINSPDYVKANTQTLIAVRKLFFEHRNLFLSTPKEDGKPPKSLSPLETARIIYKTLKVIKLDHQSGLLGVYNPELGIYETNENFFHRLIYWLEPSYSQARSKEVLFKLETLAEVKQQTAEAHLIPVANGIFNKKTQQLEPFSPKYVFTSTIATKYNAKAKVPNINGWNVDDWLLDLMSGDKELVSLLWQIISASTNGNYSYRKGVWLVGKGNDGKGTFQSLIMNLIGRENVASVKAEQFSERFSLSQVVGKTCIIGDDSQVSYLDNAGNYFSVVTGDPVPIEAKGKQPTLAVFNKLVIQSTNFLPKFRNKSNGTYRRLLIVPFNKSFTSDNDNWKIKDDYIKRKDVLEYVLKIALSLNFDKFDEPKATQGLLDDFKISNDNVLAFVNDMFEEFVSDFLPTAFISALYRAWCEDEGVKPFTKREFELKLPDHIKKEWEKTSKRPHTAGFNRAIDLHRAEEYELFRRLFHWDDDKQKSMTKGYLRKKKRK
complement(2074537..2075331)       PHAGE_Lactoc_bIL310_NC_002669: hypothetical protein; LLJM4_2077; phage(gi13095885)     0.0                 LactococcuslactissubspcremorisMTPKEQALNCISRGFSVIAGFPAGKSERAVIRGTSSGTLDEITVSEWFDEIPNRNIMINLRNSGLICIDLDQHQNGQNGRSVFSRLWNEHSEGEILSTYVEKTPTGNGLHVFFKVPKELFNQPIVDELADGVEIKTHFTPIYPSKRTDGNYMPLNDTETNEPLTFDNLSDCPDWLLEMIQRPQKRQNPTLGSRTYGAEMWELFNQGARKGNRNNDTNRILHYWRKIGIDNNHCMDLLRTFNNRTSPPLPDDELATIWKSVFKMK
complement(2075328..2075663)       PHAGE_Lactoc_bIL310_NC_002669: hypothetical protein; LLJM4_2078; phage(gi13095884)     2.89e-67            LactococcuslactissubspcremorisMKLKNLQKIDQNIIKFLAEHRGIDRAIKGRNLAQNLNIDFRTLQSRIEYLHKQGCAIGSIDNGYFIPTNEDERRAGIIKKQRTGIAINNAVNGYTLAELDWIDQLFEEVDH
complement(2075660..2075974)       prophage protein; LLJM4_2079                                                         N/A                 LactococcuslactissubspcremorisMTLRNLSDEEKQEINNLDLTHEDMYKMLKAQPDIEIKNITIEALFKDDDLLAVTPQFDDISNLEAVNILLNVLVADAKQNTDIENFIKTIISMWGTYDEAEGKL
complement(2075971..2076225)       PHAGE_Lactoc_bIL310_NC_002669: hypothetical protein; LLJM4_2080; phage(gi13095882)     3.54e-48            LactococcuslactissubspcremorisMIEHHQGYTTIKRYGRNSFRQAGKHPFKMIHNARAVKYDLIQQFEASTGIILPSGVKSNLCTQVSPVLGKQLAIMKLQIKETKK
complement(2076222..2076461)       PHAGE_Lactoc_bIL310_NC_002669: hypothetical protein; LLJM4_2081; phage(gi13095881)     2.72e-52            LactococcuslactissubspcremorisMTNIIRACPYVAGIDSVGMRSLKGYHTALTDKQIEKIDPLNANTGTVDYSFKVRKYKHGIRFEGEKEGGEISLFDEVAK
complement(2076504..2076785)       PHAGE_Lactoc_bIL310_NC_002669: hypothetical protein; LLJM4_2082; phage(gi13095880)     8.89e-59            LactococcuslactissubspcremorisMNDDTLINLVARGLVDKIIHLFNKYLGTQLKIRNEKRVLPYISKKRVMEDLDISDGTLDNWEKHGLNRYKPKYKTSLIYYLIDDICKFIIKDT
complement(2076778..2077302)       PHAGE_Lactoc_bIL310_NC_002669: hypothetical protein; LLJM4_2083; phage(gi13095878)     8.65e-93            LactococcuslactissubspcremorisMKFKTFDLRVYRHNDETLLSFDVKGGRIPLSKLLHIPKNKPFKMKITPEIVERYRIKQEIKQTEYKRKSPEGLYPLIKAIEKDVSQLLNKQDEDDWEKWKRIFAYECLYDVAFNRGIRHERQRRKSKETVLSAFDIISSEDVLELSHELGISEDKLTYAVLEVISKRKNGGKNE
complement(2077299..2077496)       PHAGE_Lactoc_bIL310_NC_002669: hypothetical protein; LLJM4_2084; phage(gi13095877)     1.41e-34            LactococcuslactissubspcremorisMNNTANKETYILDDSIAFELMDLLKAKARHFIQLNEYVYRLFDGQSVVTFTTLENDIQVEIRGKA
complement(2077511..2077732)       prophage protein; LLJM4_2085                                                         N/A                 LactococcuslactissubspcremorisMFEELEIHIEEVEMYIQNIYKAVNDYASGTYESLELDDKGTHFITKGNAQDLSDYVSDYLMTIANIIGVSIIE
complement(2078357..2079046)       PHAGE_Lactoc_bIL311_NC_002670: Orf3; LLJM4_2086; phage(gi13095661)                   5.45e-88            LactococcuslactissubspcremorisMKDLAFLTSPDMSKAEVVTNHVVIAEYSGLNKISVRKLIDNNKQDLEELGILSFEMTKPIKGSTGGRPTKIYQLNRNQAMLLITWLDNTEPVRAFKLALVKRFNEMEKELQARKIARAVEKQKGVNLHQSISEWVHYPRHSNTWHGIIRSLLATTVTGLTKKQIQARDTDWRKEKTLLDLLNSEEMERYKMLESIAIAMIEAGSDYEPIKTAIKSTMTTKKAETTTETA
complement(2079152..2079367)       PHAGE_Lactoc_BM13_NC_021861: putative repressor; LLJM4_2087; phage(gi526244821)      6.40e-10            LactococcuslactissubspcremorisMSKTYKPLDQILKSSGFRYEAIAENMGITYNALYRIRIAPNKLTVDRIRDLEKAAGLAENRIYDLLKNFEN
2079492..2079968                   PHAGE_Pseudo_PS_1_NC_029066: CI repressor; LLJM4_2088; phage(gi985757672)            2.99e-09            LactococcuslactissubspcremorisMTNKDIKFPKMLRYYRQQKGMKMKQLAKEMGKTESAISRWESGDNSPKMGEIQKIADVLGVTKSQLLGIEDSSKDEYIYEELRRIWFEFIFRKGVKENVEVAQKAVETIASVCQDNRIEFDKELFDKSYEINKILNPISDFNSLRHSSVMKLIDDDQE
2080093..2080350                   prophage protein; LLJM4_2089                                                         N/A                 LactococcuslactissubspcremorisMKVNNSEQRGINKKVIAKTIIFLFGLLILLMIRVFLKINLMPSMFISLLFVVIVLKNPENKYMKIGRIGLIAVLSILSILSLVLR
2080854..2081132                   PHAGE_Clostr_phiC2_NC_009231: putative abortive infection bacteriophage resistance protein ORF 37; LLJM4_2090; phage(gi134287370)     4.95e-06            LactococcuslactissubspcremorisMRLYGSTFYIMPKSVNGKVERTNSNQLWGYFLLLKFLYHDKEAWIEKTVQLREIFSKYSKFIDLKELGFPQNWFLKLANSNRNQLKYKGKID
2082249..2082413                   prophage protein; LLJM4_2091                                                         N/A                 LactococcuslactissubspcremorisMPTQEIEFKHLDNQYKDEVNALKEKLENLQEQIKVQKRIEEQEKPRKWWGLWRK
2082401..2083549                   specificity determinant HsdS; LLJM4_2092                                             N/A                 LactococcuslactissubspcremorisMAKIDDSVKKKVPELRFPGFTDDWEERKLGELGSVAMNRRIFKDQTSENEEVPFFKIGTFGSKPDAFISRELFEEYKLKYPYPEIGDILISASGSIGRTVVYQGEDEYFQDSNIVWLKHDNRLDNKFLKQFYSIVKWQGLEGSTIKRLYNKNILDTDISIPSTIEQNKIGMFFEQLDDTIALHQRKLDLLKEQKKGYLQKMFPKNGEKVPELRFAGFADDWEERKFKDILKTHSSRSYLAGVSENGEYEVIQQGNKPIVGYSDGEPFTDYKDVTLFGDHTVSLYKPKSPFFVATDGVKILSADNFEGNYLYTTLERYKPEPQGYKRHFTILKNQDVWFTENMEEQQKIGSFFKHLDETIALHQRKLDLLKEQKKGFLQKMFV
2083738..2083749                   attR                                                                                 N/A                 ATCACTATAAAC
2083946..2085127                   PHAGE_Lactoc_bIL310_NC_002669: integrase; LLJM4_2093; phage(gi13095863)              6.74e-116           LactococcuslactissubspcremorisMNIKEYIKKDGTKVYRTNVYLGVDNLTGKQVRTSVSANSRKMCDIKARQAINKFINNGSTIAREKVVFDNFESLALSWFESYKLTVKENSISVADNYLRNYILPPIGSYKLSKITPMLLQELVNKWANNANTAEIINGKREKGKCKDYKLLLNFIKRILDYGMQLGAIEDNPAIKVFPPKLKTRTVKKIKYFDNEELKQFLSYLNTLEPNTDNRKSKTLYKLLLATGLRVGEAMALSWSDIDFNNHYLNVSKTLIQQSNVIQDSAKTKESNRSVFLDNDTLESLKEWRKYQNDGAISLHDSLVFSYHQKMRSYEIERQKLVRHFKNAGVPNIGFHGFRHTHASLLMNNDVNPKEIQRRLGHADYAITMNTYSHLAKSKEKETAEKFSSILKAL

#### region 6 ####
2129083..2129094                   attL                                                                                 N/A                 CTACTTTTTTAT
complement(2129291..2132383)       PHAGE_Gordon_Hotorobo_NC_031229: recombination endonuclease subunit; LLJM4_2143; phage(gi100058)     5.48e-48            LactococcuslactissubspcremorisMPARVRSEGIALYAKGFLNDPIETDFKLTAEIDGEEVSYDLDGAQDSCTCSIFQQNHRYCKHIAAIEEYLKNQDKGSLETKDKETKGAERGLYNENIAFLDAVNGETQLNFSTDQYSIEVQIEDNSQLYDYFSMDYFLYFDLKLKSKNLGRSYVIKDIPYFLRALKNYSQYSLGSLHYIDLFFDNFDEASQEFLSFLLKIDGKSDEALTKSLYIKNGRYLNIPFLFLEEAMDLVSALEVYQLKIIGRTVNYFTFIPLDNDSEIFKFKVESQQDYIELSLFSEDYHNFYDYSLLYDNNVFYKLSQEQRRLLLVLDKQFAQKSKIKFSYSEKDKLAQALQQLSTLGKIEAPEHFVVKPFDAKFTFDLLDEKTLSLAMKFDYGTFSIDSFHDLETLEFSRDLRKEQKIFALMERLQFAKAFNSTLEITEHLSENFFLKILPSFQKLGQIELSPTLRNMRMDEVPEIHIDSQGGLLDISFNIPHVEDGEFANVIAKLQENAEFYISESGKFYHFNEKFDRLKAALHELDDQFVIQGSSLHVNINRSFQISKIFEKISGASFSEKFKSLYQHLTHPEEFPYEKPEHIKASLRSYQETGVRWMSMLSHYNLGGILADDMGLGKTVQAITFILSNLKKDESVLITAPASLTYNWASEFEKFTDEIDFVVIDGNKADRTKEIQENHQIYITSYGSFLKDFEDYQDKKLNYLLLDEAQVVKNYSSKTNKSLSALNVEHTFALSGTPLENRIEEIWAIFQVVMPGFLPKREKFNKMEPSVISRLIQPFIMRRKKEDVLEELPEKMEITVYNQLADDQKVIYLAQLELMQKQVLEMDNAALSRSRIEILAGITRLRQICNTPALFMDDYKGSSGKLERLRELLAQIKDSGHRPLIFSQFTKVFPHIEKLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRDAFLVSLKAGGVGLNLTSADVVILVDLWWNPAVEEQAIARAHRMGQKNTVEVIRLITQGTIEEKIMEIQERKKDLIANVLEGDTVDKVLSEAEIREILGV
complement(2132592..2133212)       PHAGE_Lactob_JCL1032_NC_019456: integrase; LLJM4_2144; phage(gi418489141)            4.42e-12            LactococcuslactissubspcremorisMKEFEKTQNAKQEDCVRKRLFIEFTYLNGNRYGEGAGLKFSTVNHGGIWIKDQYSRKSSVKNPINKQTKTLTSRRIKAFENDDTRSKEIIQWFLDHNNSGINDDYIFVRKNGHLLSDDTMNRYLHRFEKQMPDKLSSSFVMHSLRNSYITRRAEAGDTETEIMAKVGHANPNLVHTLYTHVRDTLKFDEQKKFKKQPRLLKIGKSA
2133295..2133975                   PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; LLJM4_2145; phage(gi985761246)     4.79e-88            LactococcuslactissubspcremorisMNYFKGKQFQKDVIIVAVGYYLRYNLSYREIQELLYDRGINVCHTTIYRWVQEYSKVLYHLWKKKNRQSFYSWKMDETYIKIKGRWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLHKQFGQPRVIVKDKAPSIGSAFRKLQSNGLYTKTEHRTVKYLNNLIEQDHRPIKRRNKFYRSLRTSSTTIKGMETIRGIYKKNRRNGTLFGFSVSTEIKVLMGILA
complement(2134238..2134996)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; LLJM4_2146; phage(gi557307613)     1.79e-53            LactococcuslactissubspcremorisMTTYHQLLNQLDHLKLDRVRQLLPEFLDEHADISLVEGLHELLSEELREREALLQERRLKKAHLPYEKRVMDFDFQFQPKINKAEILDLHTLRFLDKHENLLFIGNSGVGKTHLAISITLEALEKGYSSYFCMSTELVDRLLRANQKGTLERVLKQYANYDVLVIDEVGYLPFSRDGASLLFQLINMRYEKKSTLITTNIPLSQWSEFLQDKKLTNALLDRLVHHSKVISITGKSYRMKDYSEKKTKTPKSK
complement(2135008..2136231)       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; LLJM4_2147; phage(gi557307612)     1.22e-21            LactococcuslactissubspcremorisMRKDILESITEHLMTGIKPNFADIARRYNCDYRTVKRYYDLGKEKTLEEASKRRVPPSLIENYKSIIEDKLKLGCSVRSIYYFIQLKGYQGSYTTVKRYARLIRESCKHKATIRIETTPGLSAQVDWKENLKLISRNGEVFTINIFLYILGYSRMKYLQLTVDRLQPTLFECLNHAFEKFGGVPEEIWFDNMKTVVDHSKSQFSNVVFNERFRQYAKDAGFKPIACRPFRPQTKGKVEALARTVDRLLVFNNEFEDLEELQALVQQLMEDLNHKEISQAIGTSPSERLDQEALNLKAFDLELLKVYSQLSVPLTRKVSKEALVIFEGRKYSVPVKYIGQTVTCEKEQEDLKVYCDQRLIARHPLSDRPFNYRREDYVEILKSDVFKHLEEDELEAYVDENLQAYDLL
2136544..2137434                   transposase for insertion sequence element IS982B; LLJM4_2148                        N/A                 LactococcuslactissubspcremorisMTYNSTLPKVFVYLLTTIETLYQTRVPLEVQNRKNVHLATSDCLVIACYLWGVLHFSETLKAKHQLAQSLFPNFLEYSRFVRRCNALLPSIQVIRQALVFKEVEGMSVSIIDSFPIPLCQPIRNFRSKVLGDYANVGYNATKGQYFYGCKCHALVSESGYIIDYTITPASMADSSMTEEVLSQFGTPTVLGDMGYLGQSLHDRLELKGIDLMTPVRKNMKQKKILFPNFSKRRKVIERVFSFLTNLGAERCKSRSPQGFQLKLEMILLAYSLLLKSAKSLEPETLRYSIGYQVMPK
complement(2137587..2138543)       PHAGE_Mycoba_Sheen_NC_028914: tail protein; LLJM4_2149; phage(gi971755194)           2.89e-06            LactococcuslactissubspcremorisMKNQQEFLAMIEDYLERDVFPGVNFAILEGEEVSEYLFGKAALIPEPIALTPGKKWDLASLTKVIGTGTAVIDLVLAGKLELDAPLQKYYAKFTDSTVSLRQLLTHTSGIDPYIPNRDKLGFFELTEAINQIRVTDDKSFKYTDINFILLGFLLEEYYDESLDYIFNKNIFKNWEMKQTSFGSVENAVPTSQNIPLGTVHDPKAQVLKNHCGSAGLFSTLSDMILFSQAYFREEKYLELLKNYADGAKERSLAWDLPAENNDWLLHTGYTGTFILINPRIKKAVVFLSNRVHLKDNREKWIEERDRLIKFLINHLSLD
2142252..2142263                   attR                                                                                 N/A                 CTACTTTTTTAT
