gi|00000000|ref|CP016102.1|  Clostridioides difficile strain DSM 29627 chromosome, complete 4209547, gc%: 28.79%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1493318..1493518                   PHAGE_Lactoc_bIL312_NC_002671: Csp; CDIF29627_01417; phage(gi13095918)               7.93e-21            ClostridioidesdifficileMKTGVVKWFNNEKGFGFISVEGEGDVFVHFSAITGDGYKTLEEGQSVEFEVVDGAKGPQAANVVRL
1493939..1494367                   regulatory protein; CDIF29627_01418                                                  N/A                 ClostridioidesdifficileMNILFFLTPKSEVAYIYEDYTIRQALEKMEYHKYSAIPIISKDGKYVGTITEGDFLWTLKNDLNLDLKGLEDVPVTDINRKMDNSPVSINADIEDLVIKSLNQNFIPVIDDQDTFIGIIKRRDVIGYCYEIIRGYKNLANDN
complement(1494510..1495265)       peptidyl-prolyl isomerase; CDIF29627_01419                                           N/A                 ClostridioidesdifficileMEKKVLATVGEKEITNIDIENALKSLDPYQAMQFKTEEGKKHLLNDLVNQELFFLDAKEEKLDEEEIFKLEMKKIEENVLKQFAINKVLSSVNVTEDEKVKFFEANKSSFSKPESATAKHILVDSDEKAKEILAQIKSEEISFEDAALKHSSCPSKDMGGDLGTFGRGQMVPEFEEAVFSMAKGEVSEPVKTQFGYHIIKLENLQESTESTFDEVKAEVEKSLLYQKQNEVYGNKINALNAKYGNLVKYND
complement(1495386..1495802)       hypothetical protein; CDIF29627_01420                                                N/A                 ClostridioidesdifficileMYKEKLFDNYFKFLALLFWPIMWYKWIVISNGTLENMLFTIYAIIAIVFIILYSVFMIKYKDITQIDFFYRISTLLAFIFTLFSFLIYPKSLFFLYLKIIFTGIYLYYSIVKTLKFKDDEGVVGIMSSLLLIVITLFY
complement(1495966..1496472)       PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; CDIF29627_01421; phage(gi209901280)     2.01e-09            ClostridioidesdifficileMNNLDKLFELASQEEIIIHYTTYIAGDLEGLYINKHGIKIISLLSNLKQNSKKLTSILAEELGHHFTSLGYYVSSYNDYYTKIIIDKCENKALKWACEFLITEEDIINIINSGITCVYEMADILNVDITFFQKRLEFLSLKKQSLQLGNNKYLILTNLPYFYIFDPIS
complement(1496554..1496874)       PHAGE_Clostr_CDMH1_NC_024144: putative repressor protein; CDIF29627_01422; phage(gi640884900)     3.70e-17            ClostridioidesdifficileMFAKRLRELRKEFGLTQRELGEKVGVSQRVLGYYETENRFPDEHILNKLADVFNVSVDYLLGRTLVKENIDTVAAHRKNPHEELPEEAQEQLNDYIEFLLNKYKKK
1497043..1497240                   PHAGE_Brevib_Jimmer2_NC_041976: hypothetical protein; CDIF29627_01423; phage(gi100059)     1.48e-09            ClostridioidesdifficileMFKNNLKYYRKCKGMTQIQLARKAGITNDYISQIERGIKNPGLLMAKKISSILEQNIEEVFFIQL
1497345..1497785                   PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; CDIF29627_01424; phage(gi209901307)     2.82e-40            ClostridioidesdifficileMENKKDILFKETDKRLHNYKYLDIKIKNINLDIKRCENEYSGCGAMVYTEKTSNTYNISSSVENEVLKREERLRKLKMEKEDIEIEKEKIENALTCLNDIEMEFFNLFYNSKTKNNMTYISMKLHLDRTSCYNLKKKMIFKLSEIL
1498034..1498477                   PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CDIF29627_01425; phage(gi90592649)     2.29e-21            ClostridioidesdifficileMLKYKEILETIIEILKKNFTESIFIDDESVQGSEGSCFFVSILSVICTPIMLNTNNKDIVISIKYLPKPQSNSIRMYEISDELNKLFNRNIKVTDRKLNITKLEQSIKKEESIYALNFSVTLNYLDSVYEEDVVYENMEEINLNLGE
1498482..1499546                   PHAGE_Clostr_phiCDHM19_NC_028996: putative tail sheath protein; CDIF29627_01426; phage(gi971763880)     6.04e-111           ClostridioidesdifficileMAIGLPSINISFKELATTVKERSARGIIAMVLKDAKALGLNEIHEKEDIPVDLSAENKEYINLALMGNVNTPNKLLVYVIEGDSDIQTALDFLETKEFNYLCMPKAVEADKTAIKNWIIKLRDIDKVKVKAVLGKVVGNHEGIINFTTEDVLVGEKKYSVDEFTSRVAGLIAGTPLSQSVTYTKLIDVVDIPKMTKVDAESRVNKGELILIKEAGAIRIARGVNSLTELTEEKGEMFQKIKIVDTLDIIHSDIRKVIIDDYIGKVTNSYDNKCLLIVAIKSYLEELEKSALIESDSTVEIDFEAQKSYLKSKGVDLSYMTLQEIKEANTGSKVFLKAKIKVLDAMEDIDLSIEI
1499560..1499988                   PHAGE_Clostr_phiCDHM19_NC_028996: putative tail core protein; CDIF29627_01427; phage(gi971763881)     7.43e-40            ClostridioidesdifficileMANMEARNVMSGTWGELWLDGNKVAEVKKFQAKMEFTKEDIIIAGQMGTDTKYMGYKGKGSITLYHVSSRMHKLIGEKIKRGSEPRFVAISKLNDPDSYGAERIAVKNIAFDDLTLADWEVGVKGEIEAPFTFTEYDFLDII
1500102..1500548                   PHAGE_Clostr_phiCTC2B_NC_030951: loader of DNA helicase; CDIF29627_01428; phage(gi100045)     8.09e-17            ClostridioidesdifficileMSENGLSENINIVDLLLNSDTENLERPSTIVELKRLSTIFGQEFKVMCRALTISKDEEIQNTCLKIDENMKTDIDLPEMQMLTIIEGVCDLDGKLLFKNKELMDKFKAPTPKELARKLLLPGEITNLYRILQDVMGYGKNAVIEEVKN
1500575..1500742                   hypothetical protein; CDIF29627_01429                                                N/A                 ClostridioidesdifficileMYYYWKKKGIRPSLFYAMDKGELKLIEAFFALEIEEEVEKMKHGYGMCPLTGGGM
1500742..1503141                   PHAGE_Clostr_phiCD506_NC_028838: hypothetical protein; CDIF29627_01430; phage(gi971819922)     3.21e-15            ClostridioidesdifficileMGNVREEGINMYLTDNYTPKMNQIISVTDNFRRATVAVSLSTNVMASSIKNSIGSASSRVNSLNSSLRKVQTTASSVSSTMTKLSSSINAVSGVIGSLNGSIMRLAITIAMIIDYFNKLIQKKNEFNSNIMIILIFKAKSDEIEKTKNKLLGNLKKIGGKVWKIVIKAKDMTKRVISSILGKLKQVEKRPYQGSINLKDMVSSAMGRILPKLMLFKNTFWSGVIAIKDMASGIISKVFPKLRLFAGKVWSGAIAVKDMASGILGSIKGKISDLTNGATIGVAVKKGVDLLGQEQNQKVVLESVMKRNTGKVNQREVDDYYGSLVRMANDTPFDPEDVVAMGTKAKMISNITGGKKEKDITQAMVDVRALNMNTSSEQDVSAAFLSAAKGNMESLNTLVGENYKTFDEALEGISVKQMGLAKEMSNTIPGIISGAQTSINNGLKSIVKPFDDILGQGLKKIKTFIESGLGNLAGLSERMAGKIGNVMNGKIIIGNKYDQMQSRSVKNGKEFSDSTQYRISNEAEKRKMMVENKQERFENHAATMIGNAPKAIVNAGSTLLQNIDFTALIDSLLPVVNLVNNLLDSINNKSPIAQGLISIFGTIVTTAFQLIGPVVEAVSPIITRIFTFLGEYAPQINNFIETLGVIWETVWATIGPLLEDAWIIVEPVLGGLFNLFNDICNIIKDVCKWWQNLVEKINKNPIIETVRSIIDDWNAGTSKSGSNAFGLNYVPYNDYPTRLHEGEMVLTKQEANQYRSGKNGGNISIAKLADTIVIREEADIEKVTSKLVSSIKMAQLGGVL
1503141..1503563                   PHAGE_Clostr_phiCD506_NC_028838: LysM domain protein; CDIF29627_01431; phage(gi971819923)     3.81e-61            ClostridioidesdifficileMEMWLRQAEDRFRFPVFPSSFSINGKAAVNSSSILKIGEIATFGGVALKSISISSFFPNKDYTFCDYTGFPSPYDCVNKIEKWMKEGFILRFTITETNINMEVIIEGFSYEERDGTRDVYFTLDLKEYKRIKIPKVTPKQ
1503845..1505377                   PHAGE_Clostr_phiCD506_NC_028838: NlpC/P60 family protein; CDIF29627_01432; phage(gi971819924)     0.0                 ClostridioidesdifficileMIINRSKDSSSNEISFVSKDMGFLLTQSEVSYNFKDKLVEDIAKQVFAENRLSVGTIAKTNVKYTKMFIGVNGYDTIMSAYTEASKKTKKKYMIEANLDKFNVIEKGTVTLSVMFEEGFNIINTTFSESMENVKNKVIVVDQYGSKISEKIDNEIFKEVNVIMQKVIQQQENQDVDIDSEFNGIEKSCSLKGYGDVSCITGRGVKVKDSYTKLVGLFYIDTDKHTWQNGEYQIELELNFQNLMDEKSAGQDEPKEESNLGGEDYVGGTEFSAIFTAYYPGPGIEGGDTDCREKKLNPSKKTCAAPMVGAYEKSYYTKEFLSKHPLFKYGDEVSIVTGVSGRDGVYKVNDNGSAIIIEKDGTYHIDVLVKNAEEMKRFGKRKGKIIIGGYSGNASNKAKIVISEAKKHLGKPYKWGGNGPSSFDCSGLMVYCFKKVNVSLPRTSNQQSKKGKKVEQKNLQAGDLVFFHNPVSHVGLYIGNGEFLHAPQTGDVVKISKLSSRRDFNTARRVL
1505393..1505719                   PHAGE_Clostr_phiCD506_NC_028838: hypothetical protein; CDIF29627_01433; phage(gi971819925)     3.01e-66            ClostridioidesdifficileMANPINEFIGIIREEGKHHNQPSFFIGKIKSKLPDLKIETNNIILEKEDILIDSWMLDRQLETFDTETNQEHQHEVKNPFIDNFESGDMVIMFRIGEKFAVVSKLVSL
1505719..1506147                   PHAGE_Clostr_phiCD506_NC_028838: Phage protein XkdS; CDIF29627_01434; phage(gi971819926)     3.15e-83            ClostridioidesdifficileMSTIFPFIGVPEDYILPKTEELPIFREVAWDFEKDEPILEKGDFKIIEKKEALKVWIYKCIKTNRYEHEIYSLEYGTELSELIGQKYTKGLTESEASRFIKEALLINPYILEVNVKSANFNRDVLSANVKVSTIYGEVEINV
1506140..1507192                   PHAGE_Clostr_phiCD506_NC_028838: XkdT protein; CDIF29627_01435; phage(gi971819927)     1.62e-176           ClostridioidesdifficileMYSDQTYEVIKNRTLENINLDIYKGEGSFLNNMVSGNNLELSKIYLELSKIHKMAFIQDTYNQFLDKRVNEFGVYRKLGTESNGEVEFIGEKGTVINNGTVISYRDLLFVVIKDVTIGSEEGDNSLVQALEVGKKYNLPTNCEFKLVDNISGVTKITNTRSFEGGTDIETDEELKERFYKIQRNQATSGNKAHYEEWALEVDGVYNVKVYPRWDGPGTVKVLIFGKNNQAVDTETIARCQQHIDEEKPIGPTITVVTPLPIEINISAVMKLEDGYTLDNVKESFLESINTYFRDIRGEIIYTKVMGILINTTGVHDLSNLLINGSTDNITINEDKIPSVTTVNFSEVENQ
1507189..1507887                   PHAGE_Clostr_phiCD506_NC_028838: hypothetical protein; CDIF29627_01436; phage(gi971819928)     1.06e-64            ClostridioidesdifficileMKLIDKLPSFDRNYIVEEIQGAYDTELNILKEDIDDTFNQLFVDTATWGLDMWEDILCIEKKELDFDTRRSNIKAKMRSRGTSTIEVIKSICEAYTKSETDIKVYSDEFTFVLSFIANNCDYKTLLDCSDMIERVKPAHLLHYLEPIILDKSMVYCGGGMVCSEEVKVHPYFEPIIKCSAVVNCGAGMLSREEIKVYPLSIKCIENNCKINIAIANDTGVENVVVYPKSEVV
1507888..1508874                   PHAGE_Clostr_phiMMP02_NC_019421: tail fiber; CDIF29627_01437; phage(gi414090390)     8.29e-58            ClostridioidesdifficileMEEKFYIILTKIGREKIANATALGELVGLTKFQVGDSNGEYYEPTEEQTALKNVVWEGNINSLRIDEKNPNWIVIETILPGTVGGFMIREAAVLDNENNIIAIGKYPETYKPRAEDGSIKDLVVKMILQLSNTSNVTLEVDPTLVFVTQKDIQDLDDKFDKNIKEIKVNIGDVNILTTYSKDLSGAINEVVKKIENISFDDVISGQIQTDISVLKNSYNKLSEKVLDILIYLELESEVTVDEAGYWYDTLANGNNIVAIEGLKLDLNRKCITGEIGNVIFRDVVLPFSANRVRYIHDMDNNFVETKSSNTYLKEQKDITLNKYSYEIR
1508896..1514127                   PHAGE_Clostr_phiCD211_NC_029048: hypothetical protein; CDIF29627_01438; phage(gi981220878)     0.0                 ClostridioidesdifficileMKQNKLLQRGAYFNDKNILIDDFDKRYNDYDFVEFFTGISNSTFGLKSDGNLYACGDNTGFQLGLGKDSSERRMFSKVKIDNVKYVSCGSKHSVAVTKDGFAYGAGTSNVGQLGVIESTVYYEFTKLPIDDVKTVACGYDFTFVLKNDGTLYSAGLNSSGQLGLGDTNNRATFTKVNIDSVKDVVTYNQSVFIIKMDGTAHACGLNSNGQLGINSTLNKSVFNKIEGMDNVKQIACGSSHTILIKNDGTMYTTGYNGVGQLGTGNNNNSIVFTLSSINNVKYASCGNNHTMILKYDNTLFSTGQNNYGQLANANKDVASRNTFAKVNVENIKDIKCGSQFNFLINGSKEIFVSGCNLAGQLGSFFHTTFLYEFSKVQSSNLDNYSGLLVNDDYLYVTKDNSEFLNVKLSDNFQDYKKIELTDNNMFIVMNDGSLYACGLNNAGQLGLGDTVNRSVMTKVDIDNVLDIKGNGSSTFVLKNNGTLYSCGLNSSGILGLKDNTNRNIFTKIEIENIKEFCVESNYIVALNHSKELYGWGNQSYIVYGDNRNYPYKDTRVSNVEKIATWSDTLYILDSTGAAKTIGYSYNGSGGYPAPSTSSSYQSKGYNAWNTSYRTLEFYNTAQTKLINLFAFYRGCMFFDESDRAYCIGENNMKFTSSSQITPESELRFSSNSGIYHTNSDGGVYTCYQWTYKLIRCSVFDSSKSVVGNSKNILSLLKNNSTFRCTGSCLTYGQTNQNWSSYLSDNCNGAVSLGNEFILKNYSGESVLKGYGKSNNGEFGSSTSISNASNYDTGLKDIKDIIVKNNTVVVVDKNNNIYVTGTNQFNKLGIGEYNNQPIKKFTNITEQSNSFIFMDDIKEITTSRNTMFIVKNDGTAYATGNNSSGQLGLGDTINRNKFTQINIDNIKKISTSIDGNTTFAIRNDGTLYSTGLNTKGQLGLGDIVNRNTFTKVNIQNVRDVVLGTTHSHAIKDDNTLYSCGENTHGQLGLGSESNHPDVLTFTVNNITNVRDVYCSDTTTFIVKDTNIAYCCGYNNNSQLGMGNTTDQYSFIKCMENVKEVIPNEINTYIITIYNTAYSTGLNTDYCLGLNSNSNQSSFSEIPISNVVKVAPNRNNAVLLLTSEGDVYTAGKCSNGSGTGSETPEKIKKIASKAKDIGMNYRCGHYVSDNGDLYGTGFNNNGQLGVGDVTKRDTFIKTNTRVKKILPLEYANIAIKDTNDIYICGLNNYGQLGVGNRYDSRNNDNRIFNYKHMNFVMGDLTSIKNRHNFILLNNKIVIPTTKDIDYGLVLGNLYKGDLYTELPYEDIKEVSISKTHIIILLNDGTMYGCGTNYHGELLQDLSINQVDEFVQINVSDVKHVSCGDNFTYFIKSDDSLWSIGKNSEYQLGIGHNNPVTELQRITTISSCKEVHCGKNYTLVVTTGNELFVQGYNDKGALGLGSDSENTIIKFFTKALTDIREIKSYGSDHILVLKNDNSVWVTGKNRDVYKIEQPVEFLKEFTIIPISEDVNTVKDVLATDNTLYIISEVGTTNAAIEITEKSISSIKIKIQDPNKDISRIEMLINGESVKSVSDLITEKISFEVPPDKIKIGENKILFRAYCKGDDLYASLFIFKESTGNSIIKDSYVMIGNRMYKVVNTTSNEQDITITLDRGLEEDLNLGDPIYQLINKTKVQVKINKSDLFKDMKLVEIKKSDSSYQEIYELEEANIKSAQPKIIVEKGDKWTAIKRPSMIFRYDAENNEPQA
1514144..1514497                   PHAGE_Clostr_phiCD211_NC_029048: hypothetical protein; CDIF29627_01439; phage(gi981220879)     2.60e-19            ClostridioidesdifficileMFKFDKNKIEQIKQGRKVEMQYKDISDISIGQVKQDDDITNNFIANAEIYEMLLSQSSVNEASNISTFSVRKSGGESGMVEVYVALILRGKKTIEEVPAVIREQVRIRCKELEIPVE
1514760..1515020                   PHAGE_Clostr_phiCD111_NC_028905: putative holin; CDIF29627_01440; phage(gi971820067)     2.50e-48            ClostridioidesdifficileMDKLITELSSLGAIGILCALLFKNTMQEKKEDRDMYKKTVENFIELSTQQQEINKNILVQMGIMKTDVEEIKEDVTDIKGMLQNGV
complement(1515244..1515699)       hypothetical protein; CDIF29627_01441                                                N/A                 ClostridioidesdifficileMGLRDKFAQSFARSKTMSGPEKKANEIMGKLLLKKAILPIVLMFVIIIAGAMLKINSWVTLGINLVIAVGAFFYIRNSSKKYQNFKPYVGNLISLEKKGKKEYVAIIKQGKLPVKLQIAYGGEDLEHVKKNQMVQISYNPDAKIAILVNRQ
complement(1515927..1516346)       PHAGE_Brevib_Abouo_NC_029029: transcriptional regulator; CDIF29627_01442; phage(gi971767216)     3.62e-10            ClostridioidesdifficileMDTLGERIVYLRKAKNLKQYELEEMLGCDNLSKFERNIRKPNYEILKSIAEIFNVSVDWLLNGDNLSHKSDLICDSSSNYPLNSINSNEIKLLNNFRKLNDYDKAKIEGMIELKLHEYEKEKDLRKTEYNKNKDEKIDK
1516645..1516854                   PHAGE_Bacill_BCJA1c_NC_006557: cro; CDIF29627_01443; phage(gi56694875)               1.40e-10            ClostridioidesdifficileMDARKKWIPFLGVQVKQRLIELNMTQRELAKKIGVNENYLSAILNGRRTGKKYKSSIYQLLNIEYSEDD
1516886..1517095                   hypothetical protein; CDIF29627_01444                                                N/A                 ClostridioidesdifficileMCKLDSDGVIECCRAIDDFITALSNIKSLNMERLNTLTKYSSTCSILLKEGNYEGCTIVYRKMLEELKT
complement(1517312..1517710)       PHAGE_Paenib_Vegas_NC_028767: helix-turn-helix family domain XRE family transcriptional regulator; CDIF29627_01445; phage(gi971741618)     2.82e-09            ClostridioidesdifficileMDTLGKRIAYLRNSKKLTQRKLMDILKFENLGKYETGDRKPNCDILMSIADYFNVTTDWLLYGKEKVNVNSSVKEDKEDYLHVTNDEMTILNLYRQLNERDKIKIEGILELKISEYKDLKKHSSNNNEDKMV
complement(1518131..1520623)       PHAGE_Mycoba_Enkosi_NC_028936: transporter-like protein; CDIF29627_01446; phage(gi971757643)     6.65e-11            ClostridioidesdifficileMNHNTSIKNKDSNPKIFLVLTLYLLGIFMGAIDTGIVSPARTIIQNSLGVNEKTGIWMITIYTLTYASVIPISGKLADKIGRKYVYLVSIFLFGSGSLICGLSSLFSNFYILLIGRVIQAIGGGGIMPIATAEFGTTFPENKRGMALGLVGATYGIANILGSSIGSTILSIFGTQNWKWLFFVNLPICLIILIGGVFCIKNNKSESKEKIDKLGTLMLICIIVSLLYGLMNIDFFNFKNSIQDISVYPYLLTFIVLIPIFIFIENRAKDPILSFEYFLNPRILIVLILSLIVGIGMMGMVFVPQYAENALKINAGSGGYFVAILGLFAGIAAPLSGRLIDKFGAKKILLLGFSVSMIGSLYLVLIALKTNTVFSVCVSLIFMGLGMGFTMGTPLNYMMLSNTRLEESNSALATLSLIRSIGTSISPAIMIGFIAHAGLSVQDNIMDLVGKPSTPKIVQLEELENMIDDLKSDPEMAKNLKNVSIPNMNDTSNINMDMTGGKLPKSLLNKVQSADTTNITNITKEISTTMFDEKVPSIITKIQKNVQKGIDGTQSGINGIEDGESKLNSGIKGVQTGIDNMVKARAGINQGIDGVKKGIAGVDKGIKGMEQGLEKQDEAIKELTTAYNKIPTTEKTPTDNENNSNEQNQSNTSNSESDDTKNDSTENKNNNSSENKPNVNEQKESLNAQIQQLKKTRDDLNTKLQKNKTQKKELSKKLRSMESQKKELQSKLNNSINKKKDMEKSLDTMQQQKKSLQAVLAKTQEVKTEIPKAFDKSKLDYINSIENNRTKIENTLQSTLNLGFKQMYITVFCVNLLAFIILLFYKENKTR

#### region 2 ####
1736332..1736359                   attL                                                                                 N/A                 TAGAATAATATTACAACTTAAGTAAATA
complement(1736544..1737674)       PHAGE_Clostr_phiMMP01_NC_028883: putative integrase; CDIF29627_01641; phage(gi971820006)     7.17e-165           ClostridioidesdifficileMKGGVRKRSNKWYYYFDLGIVEGKRKKVERVGGNTKKEAEKALREALNEYENSGIVFEESNISLSDYLDFWYKEYVLLNCKYNTQESYRINIEKHIKPKLGAYKVKALTPAILQNFINRKYKEDYSQNTLQVLKAILHRSLKSAVHPYKHIRENPMQYVSIPKTKSKTETNKVKTITLEEFNQILNIFPQDSFQRIVLLIGFHTGMRRGEIIALKWDNIDLDNKTITVKHTLIKKPNGMFELGQPKTESSCRTIFTGDTLIKALKEHKLYQKKMKLKYGEFYFDSDWVCTKENGQQVNTHTLDTIVRQIRVALNNDFHFHSLRHAHATLLLENGANIKDIQNRLGHSQLSTTMDTYSHVTDKMKNETVDIFEKITN
complement(1737914..1738420)       PHAGE_Lister_LP_030_2_NC_021539: DUF955 domain containing protein; CDIF29627_01642; phage(gi514051963)     4.35e-09            ClostridioidesdifficileMNKLDALLDLANNEEIEIYYTDKIADDIKGLYINRQGLKIISLLNSLKQNNAKLIEILAEELGHHFTSVGNYVSSKNSYKNKILIDKTENKALKWACEFLITEEEIIHVINSHATSVYEIAEELQVSINFLLKRLEFLSKKKSMLDLGNNRFLVLTNLPNFYIYEDIF
complement(1738683..1740272)       PHAGE_Bacill_phBC6A51_NC_004820: hypothetical protein; CDIF29627_01643; phage(gi31415804)     4.46e-81            ClostridioidesdifficileMKSIISDVINRFNATPFLFVGSGLTRRYYNLPNWEDLLKVFAEKISNDDFIYTSYKNKAKSENPKMGINPRIAELIENDFNKKWFSDSSIRSLDSKYLDIVKSGVSPFKAEIAMYIKNNSKIVDKYQDEVEKLSNISKKSLSGFITTNYDCFLETIVDNYTTYIGQENLVFSSIQGIAEIYKIHGCVSSPNSIVINEADYIDFDSKSAYLAAKLMTIFVEFPIIFIGYSVTDVNIKKILNAIVNCLSNENAKKLEERFIFIEYEKNFNDIEISSHTIAFDNKMITMTKIKLEDFNLLYEALSEKKSKLPVRILRMFKQEFYDFTITNKPTAKIRVGSVDDTRIKDEDLVLAVGKASDFGLKGLKGLSFDEWYRDIVMNDLEFSSDELLEYAYPSLIKQYNKLPLNKHLFNSTLEFPDYRTIALESDFENIISNSIKKNRNNTYIKNRSVYGIWNDEHQSFEKATRLIAFLEEKEIDTEQLENLLKKIFEENPNILESAKTSEKTNLRRLIRIYDYMKYSNMQKSLGYSE
complement(1740296..1740841)       PHAGE_Clostr_phiMMP01_NC_028883: putative repressor; CDIF29627_01644; phage(gi971820010)     2.50e-29            ClostridioidesdifficileMFRLKELREEKGISLDRLSMDLNVNKSTLSRIENGLREPKQSFIEDCSNYFDVSTDYLLGKTDIKNPNQVVKSLNPIFSKRLRELIKEKGVTLNILGKKLEISTDLLSKYENNIISPKSDDIIKLAHYFDVTTDYLLGTTLVRNHIDTVAAHKANPHEDLPEEAQEQLNDYIEFLMNKYKK
1741022..1741237                   PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CDIF29627_01645; phage(gi971820011)     2.67e-33            ClostridioidesdifficileMYVNRLKGLMKENQHTQKFVADLLGLSLFGFRLKLNGKNEFKANEIKKLSELYGVSTDYFFSELVAKMAIK
1741268..1742041                   PHAGE_Clostr_phiMMP01_NC_028883: putative SPBc2 prophage-derived antirepressor protein yoqD; CDIF29627_01646; phage(gi971820012)     3.30e-50            ClostridioidesdifficileMKDLKIVKVNNKLTTDSRDIALMVEKEHKILLRDIRNYINQMEEANKNMSTDLYPSDYFIENTYLDDYKRKKPCYAITKIGCDFIANKMTGIKGTAFTGIYTKKFDEMEKALKNEQTKLPTTYKEALQQLLIEVEEKEQLQLENQTMKPKADYFDALVERNLLTNIRDTSKELGVKEKVFVLWLIEKKYCYRDLKGKIKPYSNKMQYFELKEFTTPYGHSDTQTLINPKGREAFRLLLIKDGLIREKERECQITLLG
1742161..1742991                   PHAGE_Paenib_HB10c2_NC_028758: hypothetical protein; CDIF29627_01647; phage(gi971740685)     1.21e-79            ClostridioidesdifficileMSNNLMVFEGKEVEVFEFEGQILFNPKHVAECLDIKNVNENLRNMNNKQVIKLINSKISSTDFRKLHNTGENFLTESGVYKLIFKSRKEEAERFQDWVTDEVLPSIRKTGTYNMVNRQLKDSYMIDNPIERAKRWIEEQKEKEQLQLESKMKEKVIKELKPKADYTDMILKNKGLVTITQIAKDYGMSGKEMNKILHERGIQYKQSGQWLLYKQHQGKGYTHSETIDITRSNGMPDVKMTTKWTQKGRLFLYDLLKTNNILPDIEKEYSYQTSILG
1743038..1743247                   hypothetical protein; CDIF29627_01648                                                N/A                 ClostridioidesdifficileMENKKIEEIEKRITMLENQLQAQLFSQITAQSNSDFIDYMYQCIVLYLHEMNKSEKRKISEITKERIRK
complement(1743257..1743631)       hypothetical protein; CDIF29627_01649                                                N/A                 ClostridioidesdifficileMQFSNNISKELQESIRKTVSDTSNTEYFYYAEFQYKIILKSIEEFEKELDDEHEIALKLTNFGKDVLMIVEEVGYHNPCLIHYYGIVNGVYSEILQHTSQINFMITSVKKTDPSKPARRIGFIL
1743707..1743904                   PHAGE_Clostr_phiMMP01_NC_028883: putative repressor; CDIF29627_01650; phage(gi971820019)     1.17e-23            ClostridioidesdifficileMLIGDNIKQILRKRDIKPYKLAKELDIDVSGLYKLLRNKSSNPTIDTLIKLADYLDITLDELVGR
1743935..1744327                   PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CDIF29627_01651; phage(gi971820020)     1.02e-23            ClostridioidesdifficileMDISESITKQFSDSLKSLIEIEISKQETDRVKSQTIEQKVKVLEPKDIVVLIKRGYPNYLITVEEARGILKLDTAFMRRLVSTGLIKSLVRGDGRKISRYEVDDFIERNQGKNLDELLKAVERGDEIAES
1744308..1744457                   hypothetical protein; CDIF29627_01652                                                N/A                 ClostridioidesdifficileMKLLSLDTNNKNVVTLKKDGKVIADVVFKDIKTGKKISVGILNKKVLVK
1744528..1744965                   PHAGE_Entero_phiFL4A_NC_013644: hypothetical protein; CDIF29627_01653; phage(gi281416448)     1.50e-05            ClostridioidesdifficileMVEVNVNVKVKVEAPEFTNALLVVANALGGLNLGKAMQIEPINITDMKEEKKVEVKKAEKIKKVEVKEDVKEEIAEAKEEIEKNNENTTSEVKYTKEEVRTKAAQVSKAGKKDKLKELFGEFGASKLSEVKEEDYSAFMNKLESL
1744977..1746143                   PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; CDIF29627_01654; phage(gi100016)     4.52e-131           ClostridioidesdifficileMPLQHARLSASGAHRWLHCTPSIKLEENYPPSTSIYAEEGTVAHELAEVKLMLEYEKISKKAYNARIKKIQKSEYYNSEMEDYIQSYVENVVELVNDSKAICDDVIVMLEERLDFSEWVPEGFGTGDVVVISDGILQVIDLKYGKGLEVSAIENPQLRLYGLGAYNQFEMLYDIDLIKTTIIQPRLDNISSEEIEVTKLLTWADNVKKKAQMAFNGEGEFVSGSHCGFCRAKNDCRKRAEDNLKLARKYDFADTFALNKYEIADILGFAKNIQDWLKDVQSYALEQAEKHGVKYPGYKLVEGRSNRKYVDEQEVAKVLLNSDYDEEKIYKPRTLKGISDMEKAIGKKSFAKLLSDLIIKPVGKATLVVESDKRSEINSIDSAKKDFEI
1746158..1746493                   hypothetical protein; CDIF29627_01655                                                N/A                 ClostridioidesdifficileMPLDAGIKDKLDESISIILDLKDRKKSIEKDLDYEKDNLLDMLKILNITEYNSTEENAKVIVMDFKRESLIKDKVMSTFLEVNDNHLDRVYIPEHIKVSPVCFVSVRAKDN
1746546..1747118                   PHAGE_Bacill_CP_51_NC_025423: hypothetical protein; CDIF29627_01656; phage(gi725949688)     7.37e-06            ClostridioidesdifficileMSNQEITKLVENNLNLVHFSINRFFKSYVEQHPYLYEEFYQEGCIGLYKAALNYDSNRGKFSTVAVSYIRIEMFKALRYGEKHYRNSIEGLDVSVFEDSKRPLKDIHGFYEIQFNYDVDYIRKIARKSYLKDIDKIVDWILQDKKISDIGELLNVSSTVICGRIKLFSKQVRDLDKFGEITSNIKSIYQI
1747141..1747713                   PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; CDIF29627_01657; phage(gi100017)     3.71e-68            ClostridioidesdifficileMSNSVQSTKVVTGKVRLSYCNIFKSRAMVEGAEPKYSVCILIPKSDKVTLGRIKKAIDAAKEQGKTSKWGGKLPGNLKTPLRDGDAERADEAEEYVGMYFLNANSTQKPGIVDKDLNEILDNTEVYSGCYGRVSINFFPYNSAGNKGIGCGLQNVQKLADGEVLGGARASAEADFSDDFEYEDEEEDFLS
1747713..1749671                   PHAGE_Clostr_phiCT453A_NC_028991: exonuclease A; CDIF29627_01658; phage(gi100018)     0.0                 ClostridioidesdifficileMRTLSIDIETYSDLDIKKVGVYRYVDSANFEILLFAYAFDNEEVKVIDLVNDEELPKEVIEALNDNKVIKSAFNANFERTSISKFLNINLKPNEWSCTMIKALTLGLPGSLDSVSKALKFNEDKQKMKEGKALIQYFCKPCKATKVNKGRTRNLPIHDMEKWNKFKEYCKQDVVVEREIRNKLSKYKTTEREIKLWYLDQRINDTGIKVDTELIENAIECDKRYTEKLTKEAIKITGLNNPNSPAQLKKWLSDKVGFEITSLTKESIPEILKQVDDENVVRILELRKLMSKTSIKKYEAMKLAKGNDNRVRGLLQFYGANRTGRWAGRLVQVQNLPQNHIEDLDLARNLLKEGDFDLIELLYDSVPDVLSQLIRTAFIPSEGHRFIVSDFSAIEARVIAWLAGEKWRLDVFNSHGKIYEASASQMFKIPIENIKKGSELRQKGKLAELSNGYGGSVGALISMGAIKMGLKEEELQPIVTAWRNANPNITKFWWDVDKAAKKAIKDRTIVEIQHGIKFIYNPGVLFIELPSSRRLSYLRPKIEPHTTFSGDKITYEGMEQTSKQWKRIDTYGPKLVENIVQATARDCLREAMFNVTDAGYSIVMHVHDELVIDVDKKGGSLEEVNSIMGKEISWAKGLPLKADGYECDYYKKD
1749683..1752100                   PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; CDIF29627_01659; phage(gi100019)     0.0                 ClostridioidesdifficileMDIKASEIEHINVRHDGQLMLAIGKNKLETHWKNKSILWSELVNRLSKTLRTQETYTEYRKMSKTEKDRVKDVGGFVGGSLKNGRRKAENIANRSIITLDIDYANKDIWEDITLLNDYACLMYSTHSHTENNPRYRLVIPLTRPVLPEEYQAISRMIADTIGIDMFDDTTYQPHRLMYFPSTSIDGDYIFKFQDGEFLNPNEILDLYLDWTDVSYWPESSRERQKFNTQLKKQQDPIEKAGIIGAFCRSYSIKETIETFLNEVYIPGIDETRYTYSEGSTSGGVVIYDDKFSYSHHGTDPASGILCNAFDLVRIHKFGELDEDAKPETPVNRLPSFTRMSEFASSDTKVRKTIGRENLDKAKDDFGDIDFEDDEWLTRLDYDNKGSYKKTTNNILMFIENDPYLKGKIAYNEFSNRAVVLGKLPWRKDDKLNDWNDSDDSGLRHHIETIYNISSPSKVNDALIIAFENNTFHPIKDYLNSLKWDGIKRVDTLLIDYLGAEDNHYTRTIIRKVLVAAVARVFNPGIKFDNMMVLSGPQGMGKSTFIKKLGGDWYSDSLTTVQGKEAYEQLQGVWLLEMGEMMATKKADIEAVKHFLSKSEDIYRVAYGKRTSRFLRQCVVIGTTNDKEFLRDKTGNRRFWPIDAGVKKTNKSIFNGQLDNERNQIWAEAVELYKANEQLYLSDEEKKEAERQQRTHSEENAKSGIIEEYLNKPITKNWYDLSISEKREYIHGSDFGDLKEGTILREKTCVMEIWVELFNGEPKQLTPILSREINDILKGLDDWISYNGNLRFGKIYGRQRAYVRKS
1752066..1752209                   hypothetical protein; CDIF29627_01660                                                N/A                 ClostridioidesdifficileMVGRELMYVKVSVNRIKNRVNLKILKVSTMSTKKMALLTLMLTPKMQ
1752382..1752708                   PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; CDIF29627_01661; phage(gi100020)     3.85e-19            ClostridioidesdifficileMLESKIEKRLKKEIELLGGKAMKFISPGEAGVPDRIVLLPEGHVIFVELKAPGKKLRKLQQYKMRELRELGFKVKCVSTLKEIDDFIKEVKGWNLNHIHTKNTQLEKL
1752657..1754027                   PHAGE_Entero_phiFL4A_NC_013644: DNA helicase; CDIF29627_01662; phage(gi281416462)     0.0                 ClostridioidesdifficileMEFKPHPYQEYTIRKTIDNNNIGLLLDMGLGKTVCALTAISELMYDYFDISKVLVIAPLRVARDTWSSEVKKWEHLKHLKVSKVLGSKLDRVRALSTDSDIYIINREMVPWIVDFYKRKWPFDMVVIDELSSFKSNKAQRFKSLKKVLPLTKRVVGLTGTPTPNSLIDLWAQMYLLDRGERLGKTITGYKERYFEPGQKNYQTGAIYNWQPKDGAENAIHNKIKDICISLKAEDYLNMPKKIDNKIEIHLDSKILKYYKELEKEKILELEKDIITASSAAVAANKLLQLANGAIYDNDKNVKELHREKLEALKEIIDVSNGKPIIVFYNYKHDYNRLMKEFKSLKPRTIENSKDIYDWNNGRIQLLLCHPASTGHGLNLQSGGSIIVWFGLTWSLELYQQANARLYRQGQRETVIIHHLICKGTIDEQVMEALENKDKGQSALLEAVKAKLKEYRE
1754181..1754660                   PHAGE_Clostr_PhiS63_NC_017978: gp40; CDIF29627_01663; phage(gi388570666)             5.21e-37            ClostridioidesdifficileMDKESIKEIVRELRKEEREDRKKGVLYNTRLLMKHYNDFKRHIDSAVSEAKDVDYLEDDLGKLDNEELYILSIKKSKARTIIMIAHIDSAMKTLKLRQERLHSYEKYRALELYYCDEKTYEEIAEILNCGVVTSRRWINEMIKELGVYLFGIDGLKLTV
1755145..1755381                   PHAGE_Clostr_phiMMP02_NC_019421: phage repressor; CDIF29627_01664; phage(gi414090441)     5.62e-49            ClostridioidesdifficileMPNFGTTFVTEEAVYNMSFRSNKAEAKLFTKWVTKALKQIRIHGYYIATEKDQEWLDIRTEGKKVRKDFTDEIQEFVY
1755684..1756658                   hypothetical protein; CDIF29627_01665                                                N/A                 ClostridioidesdifficileMSNFKKRYIDVYRIDIINKINGSVYSDEEILKEVIKTFFKDKEYCKENKNGINITKDKKFWITEVKCSEDDLIIKVKLEYTKYNQNTNIINAHTKEVEGNKKMDQGDSNKQHLFIKFMKENNIAVVLFERVFVGVPMIELSKNLHLYYEDMIENNKFDNNMSKTSINITQIASKDFIEQILDLDGVSKITLNVDREKFGTDEDNLFSNLNNSRRHNDLIYKPTFRTRYLPSEVKRCCEKYIKGEEFRNKKINRIIIEGEKNKRKLKLDTEGIKLCREIEVSLDIDNHIDSEDIFDKMNNLIDDLIENNSVFFNLMYQEVAMSEA
1756679..1757188                   hypothetical protein; CDIF29627_01666                                                N/A                 ClostridioidesdifficileMYKKVLNILLNYYKAINSKEVVELVLTPVLICIISYMFFNSSINKEVVISLNKDVLTLSGLLVAFGVCIITLLFTTYNKSISEAKDIKTERKVNGFNISYFQFIQLKAYYTVIMEILVVVICFINTIMLTRYYSNIIFYVLIFFTVHIILSLTTLIISMFHLSWKDRGD
1757259..1757951                   PHAGE_Clostr_phiMMP01_NC_028883: putative phage-related terminase small subunit; skin element; CDIF29627_01667; phage(gi971819963)     7.76e-165           ClostridioidesdifficileMQDVKEKVKQDYLKGMKQKEISSKYDISLNTLKSWIKRYNWASEKKKGAPINKRGAPFSNKNSVGHGAPKENKNAEKFGFFSKYLPEETRELIQEISIKDKFDILWEQITIQYAAIIRAQKIMYVKGKEEMVKELKKYESTENGEKIEYEFQFAWDRQASFLNAQSRAMSELRSLIKQYDEMIHKDWNLATEEQKNRVEKLKCEVDNLSKDDIGDDELKISVDYGDRNDS
1757929..1759182                   PHAGE_Clostr_phiMMP01_NC_028883: putative phage terminase large subunit; CDIF29627_01668; phage(gi971819964)     0.0                 ClostridioidesdifficileMVIEMIVRVNFNPDFKEANFTKKRYRAMKGSAGSGKSVNVAQDYILKLGDKKYQGANLLVVRKSEATHKYSTYAELTGAINRIYGKQADKYWKTTLNPLEIKSKVTGNSIIFRGVNDAKQREKLKSINFSKGKLTWVWCEEATELMESDIDILDDRLRGILTNPNLYYQMTFTFNPVSATHWIKRKYFDYKNDDIFTHHSTYLQNRFIDEAYYRRMQMRKEQDPEGYKVYGLGEWGETGGAILKNYVIHEFPTEFEYFDNMRLSQDFGFNHANVVLRIGFKDGELYICNEIYVHEMDTSEIIKIANSRGLEKTLFMYCDSAEPDRIKMWKSAGYKAKGVKKGPGSVKAQIDYLKQLRIHVHPSCTNTIKEIQQWKWKQDERTGLYLDEPVEFMDDAMAALRYSIDNKLKNNGISFLK
1759188..1760627                   PHAGE_Clostr_phiMMP01_NC_028883: Phage portal protein, SPP1 family; CDIF29627_01669; phage(gi971819965)     0.0                 ClostridioidesdifficileMLNIYISETDLIKVQLKKESTFNLVKVIEHYILKHRPEKYKQGEEYYYGNTDVNNKRRYYLLDGAKVDDFTKVNNKAINNYHKLLVDQKVGYSVGNPIVFNADDDNLTKLLNDLLGEEFDDTITELYLNASNKGVEWLHPYINRKGEFKYVIIPAEEAIPIWDSKRQRELVAFIRFYYIEDIDGNKIKRVEYYTENDVTYFVERGNSFVQEFLYDEYGKMTDIQEGHFRINNKEQGWGKVPFIPFKNNEKCVSDLTFYKSLIDIYDNNISTLADNLDEIQEVIYVLKEYPGTSLQEFIDNIRYYKSIKVDGGGGVDKLEINIPVEAKKELLDRLEKNIIIFGQGVNPESQNTGDKSGVALKFLYSLLDLKCSKTEKKFKKAIRELLWFVCEYLKISGSKSYDYKTVQITFNHSMIINEAEKIDMAAKSTGIVSDETIVSNHPWVEDVNDELERLKKQEDTQKEYDDLIPNNQDGVIDET
1760617..1762110                   PHAGE_Clostr_phiMMP01_NC_028883: putative head morphogenesis protein; CDIF29627_01670; phage(gi971819966)     0.0                 ClostridioidesdifficileMKHKDYWRKRFEQLEEAQNNKSIKYYLELEKQYKLAMSNIERDILIWYNRFTENEGISLLEAKKLLNTRELEEFKWSVEEYIKYGKENAINQKWMKELENASARVHITRLEALKLQIQQQVEVLYGNELDGIDKLMRDIYTSGYYHTAFNVQQGVNVGWSLMSLDTNRINKVISKPWTSDGLNFSERIWGKHRPALVNELHTKLTQSIIRGENPKKLVNDFAKRFKVSKSQAKNLIMTESAFFASASRKDCFNDLDVEKYEIIATLDLRTSNICRELDGKIFDMKDYQVGITAPPFHCRCRTTTAPWFEDEEGYRAARGEDGKTYYVPSSMKYNEWYEKYVKNNSKQTGAKYTKGDIEWNIRREEEAELYYDNIRNRKDDISKISKNTNWSEKSIGQIKNHIFYNTHIMRDGTRRMLDSDYSMSVAWQRLINGTYEDIDILLLKHEYLESIFEKKYNISNLEAHRMTEKKHDWYKELIKQKGEFEEDDCLNELIRKE
1762076..1762318                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CDIF29627_01671; phage(gi640884862)     6.07e-50            ClostridioidesdifficileMIVLMNLLEKNNEYVIYSYGYEENKLDGRIKIYLDDFYNYEIIKESKDEHISKSATLKAISKLIKAAKNNDLKKEMSYQC
1762628..1763191                   PHAGE_Clostr_phiMMP01_NC_028883: putative scaffold protein; CDIF29627_01672; phage(gi971819968)     1.25e-129           ClostridioidesdifficileMDWLEELLEGIKIENNKIDVVSLQKSIEKKIKETTITQEDYTNLETQLNTANEAIKKFEGGMTKEDVENLKTTYETDKKTLEETYKKEIEEKDFNYWLNDAFKSIKCRDEIALKAHLDIEALRNSKDRQKAFEEQINPLKQDKDYLFNATLEGEEPKIDTITPGQEPKINDFGFNFTGVRPHENNNK
1763203..1764102                   PHAGE_Clostr_phiMMP01_NC_028883: Capsid protein; CDIF29627_01673; phage(gi971819969)     0.0                 ClostridioidesdifficileMAALNYAKEYSNVLAQAYPYTLNFGDLYATPNNGRYRWTGSKTIEIPTISTTGRVDSNRDTIAVAQRNYDNAWEPKVLTNQRKWSTLVHPADINQTNYVASIGNITKVYNEEQKFPEMDAYCISKIYADWTALGNTADTTVLTTTNVLEVFDKLMEKMTEARVPENGRILYVTPVVNTLIKNAKEIQRTVNIKDAGTSLNRQTTDIDTVKIIKVPSNLMKTAYDFTTGWKVGAGAKQIFMSLVHPSAIITPVSYQFSKLDEPTAVTEGKYFYFEESFEDVFILNKKADAIQFVVEGAGA
1764102..1764335                   PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CDIF29627_01674; phage(gi971819970)     2.22e-45            ClostridioidesdifficileMAQVRKLNRILTIEECKIDDFLEMGYDLIDETGKAVKYGKSLNVKDLIAENNILRSKVESLEEGNKQLKEKNKLTKK
1764345..1764746                   PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CDIF29627_01675; phage(gi971819971)     5.56e-88            ClostridioidesdifficileMENNIIDEIEKRLESFGYILKDGDKWLIGFVREKIENIIKLDCNIKTMPIELKEIEVDMIVGEFLFTKKNMGQLDIESINFEAVEKSISEGDTKVDFAIGSGSQTPEQRFDSLIAYLTTYGKNKILTFRCLRW
1764740..1765087                   PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CDIF29627_01676; phage(gi971819972)     7.12e-70            ClostridioidesdifficileMVSKTRKAIEMLYRDKCTIVEYQPIKDPVTKRTNNKEVIVLENQPCKLSYKNIVSATEGKLAKLEQTIKLFISPDIEIKAGSKLIINDKEYVRSGESAIYPNHQEIILELFKDKA
1765087..1765512                   PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CDIF29627_01677; phage(gi971819973)     1.71e-99            ClostridioidesdifficileMARWGSVDFREFKRVCKKVEKLTKIDLDKFCKDAARELAARLLGKVIRRTPVDTGFLREGWSGVAYARSLPVYKQGNNYIIEVVNPTEYASYVNFGHRTKDGKGWVKGQHFLTISEMELQSQVDKIIEKKLLILLKGVFDA
1765505..1765942                   PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CDIF29627_01678; phage(gi971819974)     8.42e-91            ClostridioidesdifficileMLNNIIDGISIKLDKTFGESYTIYSEDVEQGINEPCFFIVPLNPSKVSYPSGRTLKKNSFDVHYFPKSNDKSFEINEVAEMLLEELEYIEIDGDLVRGTNMNFEIVDNVLHFFVDYNYFTIKSNNTDKMDTVELFGGLKRGDKLE
1765926..1766111                   PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CDIF29627_01679; phage(gi971819975)     5.23e-28            ClostridioidesdifficileMINLSKTLSKEENYKFTKEQIVNSKRYVNRKDLLNAILKEDELYSFSEVEDMINNFMKGVS
1766112..1767422                   PHAGE_Clostr_phiMMP01_NC_028883: putative sheath tail protein; CDIF29627_01680; phage(gi971819976)     0.0                 ClostridioidesdifficileMALGGGTFVTQNKVLPGAYINFVSATRATSSLSDRGIVAIPLELDWGIDEEVFQVTSDDFEKYSVKYFGYDYTHEKLKGLRDLFKNIRLGYFYKLNKGVKASCTIATAKYSGIRGNDLKVTVTTNIDDNAKFDVVTLLDNKKVDTQIAKVITDLQDNDYITWKKDATLEASAGLVFTGGTNGEAVTGAEYQAFLDKIESYSFNALGCLATTTEIKSLFVEFTKRMRDKVGAKFQTVLYKKSDADYEGVVSVENKIKDKDLVESSLIYWAAGAIAGCDINKSNTNKKYDGEFDVDVNYTQIQLEEALKTGKFIFHKVGDEVHVLEDINTFVSFTDDKNDDFSSNQSVRVLDQIANDIATLFNEKYLGKVPNDKAGRISFWNDVVKHHKELENIRAIEDFKTDDVSVELGNDKKTVIVSDAVKVINAMSKLYMTVSVS
1767439..1767909                   PHAGE_Clostr_phiMMP01_NC_028883: putative core tail; CDIF29627_01681; phage(gi971819977)     1.12e-95            ClostridioidesdifficileMAQTINAKDTVSAKKAECFITIEGKRYNFMQAIDLEAKMEKNKSEVPILGRTTKGNKTTGSTNTGSATFHYNTSIFRELLYRYKETGEDIYFDIQVTNEDPTSAVGRQTVVLKDCNMDSGIITKFDADGEYLDEDMDFTFEDWELVEKFNLLAGME
1767981..1768421                   PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CDIF29627_01682; phage(gi971819979)     1.02e-63            ClostridioidesdifficileMSNLSAFLSQNAIKVDNVKYVASNRFLDKEGKPVEWELKVLSSEEDEALRRKCTKRVKVIGNNGKHTGQYTSEIDYNSYVAELCVASTVFPDLKDAELQNSYGVMGEAQLLKTMLTAGEYVNYTVKVNEVNGFDTSFEDKVEEAKN
1769264..1769368                   PHAGE_Clostr_phiCD481_1_NC_028951: hypothetical protein; CDIF29627_01683; phage(gi971820134)     4.76e-10            ClostridioidesdifficileMIVFLLSILAGVISAYIYDKIKNHPDANKGDLKK
1770071..1770823                   PHAGE_Clostr_phiCDHM19_NC_028996: putative tail tape measure protein (partial); CDIF29627_01684; phage(gi971763886)     2.54e-93            ClostridioidesdifficileMGLFKKKEKEKGICIICGNEGNALKTVDNEFLCDECFEKCRGEIAVLGKGLKKLTSKEVMNAVELCRDNFGNFVKNTLIQIVYLGGHPLFNREEMICLLIRSDKIVVKAFGTGPVPIVDVFEVSYSDIKSVSIEKEEEVIRRYTATRIALFGPFALAMQKAELNKKEYLIIECNDFILSFDKNDEALATVYKNLIEYRKNNGIGNVSESEVEKNKITNPLEQIKTLKELLDMDAITQEEFDVKKKELLNL
1771127..1771300                   hypothetical protein; CDIF29627_01685                                                N/A                 ClostridioidesdifficileMSSKMGRPKVDNPKNIDVKVRFDENTHKKLLDYCEKENLTRTEAIRKGVDLLLEEDR
1771424..1772251                   PHAGE_Clostr_CDMH1_NC_024144: putative anti-repressor protein; CDIF29627_01686; phage(gi640884877)     6.16e-107           ClostridioidesdifficileMNNELMNFENNELGIKIRTIKYEDGSIGINAEDTAVGFGWCKIENKNGKEYKSVRWERMNEFCIEFGFDHKWAKDDYIPESLFYMLGMKAKNEIAVKFQTWLAVDVLPSIRQTGAYITNNANPKKLREKASEIEKLQLAYNSTSMLKELLDGAGFDNKSKLLTAKTLYKKAGIDLPIEIEEEESFFDTKQIASKLKIYSKSNKPAQLAVCEIIKKIKLEENEVKGVWETNGSWTGTVNKYTKSVIDKVRTWIEENNRPAKIEGEKKNFHVVYKIE
1772300..1772476                   hypothetical protein; CDIF29627_01687                                                N/A                 ClostridioidesdifficileMYENLLKEYNLKTDEDVEYFVKFATLLHKLKQDNEEKFQEYAEILRGILREQEERKNK
1772907..1773467                   PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CDIF29627_01688; phage(gi971819983)     1.21e-123           ClostridioidesdifficileMFCSNCGAEITGVGKFCSSCGVAVETEIIEDNNIKSNDLIVDANGIEINMTEIYRKYRKEKVNAIKNVMEISGLNIKEAKKIVDSSFEELKINFIDDTMSNSEKEKIINTQNRKNNIEKAQQESVACCPKCGSTSLSAQKKGFGIGKAVAGATIAGGIGLVAGNLGAKKVRVTCLNCGKQFWAGKK
1773543..1775909                   PHAGE_Clostr_phiMMP01_NC_028883: putative tail tape measure protein; CDIF29627_01689; phage(gi971819984)     0.0                 ClostridioidesdifficileMATIQTSIRIFDGMTPAFRHMTNAMNIVLSSFEQLQRTSSNAIDANSIRTAREELARAEAGFDRLEQQIREADEQQKRFNDDIRKGASSTDKLVENAKRLVATYIGLRSVGGLINLSDQMTSTNARLAMINDGQQSDGGLNKMIFQSAERARASYLDTAKIVSRVGMNAGKAFSSTKEIVAFAEQLNKKFVIAGATTEETNSALLQLTQGLGSGVLRGEELNAVFESAPNIIQSIADYLEVDIGKIRGMASEGMLTADIVKNSLLSAAEQTNAEFEKMPYTFGQIFTSIKNNAVMIFGVIQKKIEQSMSSKGFRTFIDNFIDSLYVLGAVAFSIFNGIINILGSPFFQAFVNAIIVGVSLIVQVLGWVITQALNITNVFAQNWSIIAPIVLGVAAAMLVYNNALLLSIANKVKDIALSAKTLAMNFAHIIAESYRAAALVASTIAQDGLNAAMAACPITWILYGIIAIVVAFFVAIAVINKFAGTSYSAIGIVAGALSGLTAFIINSVFFWINVFISFAEFFTNVLDHPVYSVKKLFFNLATAVLNNLISMTKGCDEFATNLANSIIDGINGALKAWNKFVDVLNKFGGLADKLGLGKADMVGHTKSITSTLQKAKGDLNKWLGAEPEGYKSFKQLEYKNVGDWAKNGYAFGQNLENKLKDAFDINKIAEKAKKDLGLDDLWDKKYGLGDGLGSAGLNSPLSDAAKGAKDTAGNTAKMAKTMDKSQEDLKYLRDIAEQEVINKYTGVNIKIDMNNTNNISKDTDLDGIVNVLTEKLNDAMVVSAEGVV
1775925..1776626                   PHAGE_Clostr_phiMMP01_NC_028883: putative LysM; CDIF29627_01690; phage(gi971819985)     1.28e-158           ClostridioidesdifficileMAYDFYLDGVQLPIPPPKLEIKVTNKNKTVDLINTGEVNILKKEGLSEISFEAEFTHNKLPFYRGTFRDVQFFLSKLELLKTDCKPFQFIVSRELGNKVLFNTNMKVSLEEYNIVEDAENASDTKVAIKLKQYRDYSTKKLVLATPEKTNYGRTPPPVMKPKEFRPDSSNKPNAKTYTVKAGDSLWSICQKQLGNGSLYKKVYELNKSMMDKANKGKKVPKYTIYKGQVLKLG
1776619..1778583                   PHAGE_Clostr_phiMMP01_NC_028883: putative phage cell wall hydrolase; CDIF29627_01691; phage(gi971819986)     0.0                 ClostridioidesdifficileMDDELVLANDRDVRLVIAHWEDFYEPVVLDGITWEIERRGTPSKLEFTIVMDDILEFCEGNSVRLYYKGVGIFYGYIFQKKRDKENHIKIVAYDQLRYFKNKDTYVYSNKTASELVKMLAKDFNLKYNVIEDTKYKLSRVEENKTLFDMILTALDDTLREKKEMYTLYDDFGRITLKNVASMKLDTVMNNDVIEDFDYNSSIDSDTYTKIKLVRDNEESGKRDVYIAQDSTHMRSWGILQMFETVDKNMNEAEIKQKCDILLKLYNKKTKSLSLKNALGDIRVRAGCLVPVFLNLGDIKLQNYMLVEKVKHTFENNSHFMDLTLVDGDEFASYSSSSYSSGNTNNKNEKQNGPAQSTTSKEDNDMINKLNKVFKNKLSNTGNIFVKYSNAYKVNAALMAAISIHETGNGSSSLCKNKNNFFGMKGMSFSSVDEGIKKGISNLSRNYIHTGRKTLERIRDKYAPLYDSPLNKDWVPGVGKFYKQITGSTYTSNNAGTGVGSNEEAEKNLKDTTYQVQNNNSNTLTNNNSKVSKVIQEAKNQLGKPYAWGGNGPKSFDCSGLMVWAFKRGAGINLPRVSADQSKDSRGKLLCNINDVKAGDLVFFKNEQGKVHHVGLYIGNDQYIHAPQTGDVVKISSLSGRQKKKHDFERARRFF
1778597..1778857                   PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CDIF29627_01692; phage(gi971819987)     3.21e-55            ClostridioidesdifficileMSQELLQIIKKAAMDAVETSNPIQIAFGTIESVNPLVVKIEQKASFEESFLIQTDTFKKYTDKKIGDKLVLIRMQGGQQYLILDRM
1778862..1779281                   PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CDIF29627_01693; phage(gi971819988)     2.13e-88            ClostridioidesdifficileMLPSDNLDYDIEDVSIINFDVRQEPSKTFKLNIEKNRVDGICDDVEALKQTIFLILNTERYEHLIYSRNYGVELNDLIGEPISYVIPELERRITEALIQDDRIENIDNFEFQNIKGKVQCRFSVHTKYGNIKAEKVVSV
1779282..1780328                   PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CDIF29627_01694; phage(gi971819989)     0.0                 ClostridioidesdifficileMFELMTFENIIKRMLDSVPDTFDKREGSIIYNALAPVAIELTETYIAMDELLDQTFVDTASYYYLEKRCKERGITPLSATNTIAKGVFNIDIPLDSRFNLGEYNYIAIERISEKTYKMKCETAGPIFELGKLIPIEYIDGLETTELTEILINGEDEESEDSLRQRYYDSLNSQSFGGNIQNYKDEVNKLPDVGGVKVYPVWNGGGTVKLVIINSNFKVPSTDLVNLVQEEIDPNMKGEGLGLAPIGHRVTVEGVTSTTINISAEITYKSGYTWENIKSIAEEAIDDYLNELNMSWEDEENLIVRISQIETRLLSIDGVLDITNTMINEVKSNLTINSNSIVVRGEVVG
1780321..1780938                   PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CDIF29627_01695; phage(gi971819990)     4.15e-146           ClostridioidesdifficileMDKEINLINYLPQILQDKEEYIKVFNVENKEIKTLHDKLKDLSNDQFLEDLTISGIKRWEKIMSITPKSNESLEDRRFRIFSKYISKLPYSERFLRNWLDNVVGEGNYELTINNATYNIHLESDARNQDWFEEVHSFVSNIKPCNMTLDYTRVLISKDNYMNFGITTLMGQEITIYPWSPPDIETYGEIDVLTGNGVGYQEITIF
1780950..1781942                   PHAGE_Clostr_phiMMP01_NC_028883: putative tail fiber protein; CDIF29627_01696; phage(gi971819991)     7.43e-175           ClostridioidesdifficileMAIDKSYYTIITDVGKAKIANASVTGNKVGFVKIQLGDGGGSEYTPTESQTALKNVVWEGNIGNTTTDETAPNCIILESLIPSSVGGFMIREIGYLDDENNLIAISKYKECYKPSIEQGAVVDMKVKTVLIVSNVNNIELKIDPTIIFATLKDIQDLETKIGTVNTKIDTTKTELTSNIETAKTELNTKIDQLIAGGSNVAYTQRVAIDDWVEDAESGFKATVTHSLLTHRIVVNIIDATTKENIVPNFKIVDDNSIEIRSEVKVELNVYVINGNAETHFINATVDDNRVSEMTTYSSKKIEDRLVNIEEKVNGGLSNIATSVNELITYC
1781959..1783671                   PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; CDIF29627_01697; phage(gi209901263)     0.0                 ClostridioidesdifficileMQTEWNFNYANYVQNVSLPPGRYKLECWGACGGAVDTSDWTDCAKGGYSKGEIVFKKRTNLQICVGQSGYEKVSEGSSLTRSGFNGAGAAGKVTTGSFAYSKYGGGATDIRLYHPSATWGNTESLLSRILVAGGGGGMKNNFASARSIGHGGGYVGVNGVGRDRDFCGGGSQYQGGTSYDTEEYHGSLGKGGYGNIGIGGGGGWYGGAGSYSNECGGGGSGYALNKDSYKAPGYIPTPEYYLENIVMTTGGNTTKADGYAKITLLQALPFLTVSSYNSTQATFKADHTDPALLTKIEWFIDDVLKETITTNLTEEKTINYTLEDNALHTLKIVVTDSNNATAEKVLSISKNIMPLPENVNLNDISTKLVEVNAGFKVGKTSIINTLALKNIEASLNNTLVELSEKIKTSFDSSDTSVQDLQNQVTQKNNTITQLETELSKRKRFITGTYTFTKTDAENFNLSIYDKEGTSKTLTIPVNMGFSPSLIVLSGVTFSTTSKSYVYFDNVCNSNFYNFGYNSDSTHSNPKAVGILNVSNVGYSSLVLTLYKLSMSEAVGIWAKEGATLTYKIYI
1783692..1784039                   PHAGE_Clostr_phiC2_NC_009231: hypothetical protein; CDIF29627_01698; phage(gi134287362)     3.71e-77            ClostridioidesdifficileMNRNNRIIYDQTGNIWLQTGEATGDIQEWSKITELNFLDVEFGSIDYSKQYIESINPVTKEPIIKDIEVILTDEQKRLQALEKELSMLKEENKNRDSEIVNTAFEVENIKLNNNL
1784051..1784221                   PHAGE_Clostr_phiCD211_NC_029048: hypothetical protein; CDIF29627_01699; phage(gi981220886)     3.83e-20            ClostridioidesdifficileMYNLLKLMIEQKNYSTKEDLQHKIDVFYAVNRITEEQYLELTSLLNKEETPAEPIK
1784252..1784818                   PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CDIF29627_01700; phage(gi971819995)     4.47e-50            ClostridioidesdifficileMTFKELVNKVRNLVLEAKNVTIEDTESKFTSENVEGALKECIDRADEAFQEADSGKTLLSTAIGSPATSEQTFQDYANYITGFKSNISNLETQLKSKYSVRYGPIDGYDGNPFSANFGKSASYLIVYVYFRRSVYYYNPSGSSLGSNTGGSERAWITIDSNKTGFSVHSYDTSYEPYPFTGYYIACFA
1784849..1785139                   PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CDIF29627_01701; phage(gi971819996)     1.80e-64            ClostridioidesdifficileMEEISINLLCAVAGVVISYLAFRNSSNRKIQDDTETTTKLEQQITFLCENVRDIKHDVAKFNTSFLDISERVAKVEASTKQAHLRIDEIINRIGGK
1785143..1785400                   PHAGE_Clostr_phiCD506_NC_028838: putative holin; CDIF29627_01702; phage(gi971819934)     5.83e-51            ClostridioidesdifficileMDNLISFIPEQLLILVAALYVLGVGFKKYKQLDNKYIPVVLLILGIGFSIWMLGLNPVAVLQGVICWGVAIGINQTYKQLKDGEK
1786026..1786523                   PHAGE_Clostr_phiC2_NC_009231: putative abortive infection bacteriophage resistance protein ORF 37; CDIF29627_01703; phage(gi134287370)     1.77e-116           ClostridioidesdifficileMTALEREKNNNSDKLFIIHHKEKYEGKLPIWVATEIMTFGMLSKLYSNMLPEDTRYIKNNLCRVNTLLVKSWLQSLTQVRNQCAHYGRIYNNNFRIITIKNEYKKYNLDNKKIFSYILAMKHLTMDKLIWNSFFIKLQKLINDYNNSIDLKLIGFPNNWIEILAK
1786602..1787414                   PHAGE_Clostr_phiMMP01_NC_028883: Endolysin; CDIF29627_01704; phage(gi971819998)      0.0                 ClostridioidesdifficileMKICITVGHSILKSGACTSADGVVNEYQYNKFLAPVLADTFRKEGHKADVIICPEKQFKTKAEEKIYKIPRVNSGGYDLLIELHLNASDGQGKGSEVLYYSNKGLEYATRICNKLGTVFRNRRAKLDKRLYILNSSKPTAVLIESFFCDNKEDYDKAKKLGHEGIAKLIVEGVLNKNINNEGVKQMYKHTIVYDGEVDKIPATVVGWGYNDGKILICDIKDYVPGQTQNLYVIGGGACEKISSITKEHYTMIKGNDRFDTLCKALDFINR
1787571..1789862                   PHAGE_Bacill_0305phi8_36_NC_009760: low copy number virion structural protein; CDIF29627_01705; phage(gi156564190)     2.42e-14            ClostridioidesdifficileMKNLSKKAVILSLSLVVVSPLVHKINAQDIEKNREVRYETRKANNLENMTMEEAFPDENFRKVICDKLSILDDGNPIGISQKAIIESTKGLTLGSKSIKNLSGINYFIGLENFSCRGNNLTSLDLSSNINLKELYCNENQLTSLDLSNNRELTTLHCGENNLADLVIENSKLDELNCRKNNLKSLDITKATNLTTLLCFENELTSLNLSKNQKLKILKCDYNNLNDLDISTNLELQDLNCSFNQLENINLDNNKELVKLICHNNKLQNLNLKNHEKLVKLYCNQEQLSTLNVENCINLEDLTCSRSNLKNLDISSNKNLKYLECVANKLTNLNIENNIELLELYCYDNEIKALDISKNIDLENLTCYKNKLDSLNTSKNKNLKYLYCSQNELTSLDVTKNTELVRLYCGENRLTSLDVSKNTKLKELDWSNQKKSTSTGGSSGSGGGSLSTNEESSEPTSTPSKEKLTGADRNETSVKISQKGWNKADNIVLINDSSISDALSATPFAKSKDAPILLTKNNNLNKLTEKEINRLEAKNVYIVGGLKSVDEKVVSDLKKKGLNVIRISGNDRYETSIKLAKELDKNSNLSKVVVVNGEKGLADAVSMGAISAKEEMPILLTNQNDDMKDIKDLIANKNISKSYVIGGESLFNNKEVNNTLPSVTKIAGSDRTETNSKVISHFYSKDTLNDLYVAKNGMNKQDDLVDALSVGVLAGKTESPVVLVGNGLDNSQKEFIKNKKFKNITQIGGNGNEKAFNEVENLVK
complement(1789904..1790080)       PHAGE_Clostr_phiCD6356_NC_015262: hypothetical protein; CDIF29627_01706; phage(gi326536880)     2.13e-13            ClostridioidesdifficileMEQRKLRIGFNKSGKGSFTPRLILPMSWIKEMNISPDERDVLVTFEDGKIIIEKTENE
complement(1790318..1790446)       PHAGE_Clostr_phiCD506_NC_028838: hypothetical protein; CDIF29627_01707; phage(gi971819945)     4.05e-08            ClostridioidesdifficileMGRLERRKNKRENKFNKIKNAFSFTLVLINLVLAILRLIKEL
complement(1790607..1790783)       PHAGE_Clostr_phiCD6356_NC_015262: hypothetical protein; CDIF29627_01708; phage(gi326536880)     4.59e-09            ClostridioidesdifficileMEQKESKIVYSKGGSGTYSAKISLPLSQLEKMGFTREKRKAVVIFKEDEIIIKKSDEE
1791438..1791465                   attR                                                                                 N/A                 TAGAATAATATTACAACTTAAGTAAATA

#### region 3 ####
2805176..2805188                   attL                                                                                 N/A                 GTACATATATGAA
complement(2816694..2817077)       PHAGE_Clostr_CDMH1_NC_024144: putative regulatory protein; CDIF29627_02672; phage(gi640884897)     1.06e-49            ClostridioidesdifficileMLNKKLPDIELKIMKYIWSTGYKTVISKDVADEIEKTYGWKHTTTITLLVRLTKKDFLISQRIGKHVHYRVLIKEREYLKIEGKRIFGGLHNNPLSELILKLHNEEEITEEKIIEIGSWIKSWKDED
2817457..2817633                   hypothetical protein; CDIF29627_02674                                                N/A                 ClostridioidesdifficileMFGNKMDKCTHVLTAYISSSYDYCNFLDTQLDDFILEYGENIVESCLHQVMVLISKYN
2817859..2818059                   PHAGE_Lactoc_bIL312_NC_002671: Csp; CDIF29627_02675; phage(gi13095918)               6.66e-24            ClostridioidesdifficileMNNGIVKWFNNEKGFGFISMEGRDDVFAHFSAIQTSGFKSLEEGQQVSFDIVKGARGPQAENITIL
2818505..2819827                   PHAGE_Clostr_CDMH1_NC_024144: putative AgrC; CDIF29627_02676; phage(gi640884894)     3.74e-180           ClostridioidesdifficileMLDMFITIVSSIIEIWACKKVFDYTSKVKTSLINLYFLISTFIIISTFYTNVGADNRILICIFVMFVFYKSNYDVNIYKCLIVLFSYWAILVCINALSMIVIVSINNLSSMNILLNDNFYRYETIVLGNVVLIVLLCIYKFISNDLQVTKKEIYMCIPIVANMISFFIFYKYILKLLDISSATRLDILIMVLLLTFSNIVLISSLVKILKSNKKYIELTKLQEKINAENKYYSNIKKYYIKTKELNHDMKNHLICIKEMNKKNIDTSNYINNIEKKLDEYSAVFDTGNITLNIILLEKKELCIEKGIDFTININFSDCNFIKEEDTCSIFANALDNAIEACEKIKDDDKKIKLQGMVLNKFFVIKITNTKSNDILLKNNAFLTTKEDKEFHGLGIKSIKNSLEKYDGAISINFSENLFCLNMMIPIRKSQEDSNIAYENS
2819870..2820451                   PHAGE_Clostr_CDMH1_NC_024144: putative AgrB; CDIF29627_02677; phage(gi640884893)     2.04e-61            ClostridioidesdifficileMIKSCADKIAFLFVLNQVIEKDDLEICSYGLEILLSSIINTLSSLMIGLILGRLIYSIVFLISFCIIRQFSGGYHANSNKNCILIFNSIFFISMVLGTILNNSNPIPLFLVILSSFNFLIIFIFAPVCHTNNPLNETKYKKNKLLSRTISITLFLIILLGCKYLSFYNYVVYTFLALLWINLLLIIQIIINKK
2820469..2820630                   PHAGE_Clostr_CDMH1_NC_024144: putative AgrD; CDIF29627_02678; phage(gi640884892)     5.69e-07            ClostridioidesdifficileMKKILYNFMKACGVLAMFVAFLSANTTSLWHVYQPKTPEKLKNSKNHQKEGNN
complement(2820652..2821449)       PHAGE_Clostr_phiCD506_NC_028838: Endolysine; CDIF29627_02679; phage(gi971819935)     4.46e-177           ClostridioidesdifficileMKIAIVPGHTLSGKGTGATGYIDEGKENRILTDLIVKWLKQGGATVYTGKVDKSNNYLAEQCQIANKQNVDLAVQIHFNANKTTLNPMGTETICKTNNGKVYAERVNKKLSTIFKNRGAKSDVRGLYWLSHTKAPAILIEVCFVDSKADTDYYIRHKDIVAKLIAEGILNKKIDNDGVKLMYKHAIVYDGEVDKIPATVVGWGYNDGKILICDIKDYIPGQTENLYVVGGGACEKIGSMAKENYTLIKGNGRFDTLYKALDFIDR
complement(2821446..2821706)       PHAGE_Clostr_phiC2_NC_009231: holin; CDIF29627_02680; phage(gi134287369)             5.68e-42            ClostridioidesdifficileMDNLISFIPEQLLLLVVALNVLGFGFKKYKQLDNKYISVILLALGIVFSIWMLGFNPSSILQGILCWGVAIGANQVYKQLKDGEKQ
complement(2822707..2822865)       PHAGE_Clostr_phiMMP04_NC_019422: hypothetical protein; CDIF29627_02681; phage(gi414090473)     2.36e-14            ClostridioidesdifficileMDNFLQGILASLSASLIVYVASKLFRKRKKPLKAATKSGWEFDLKIRFHKTK
complement(2823223..2824593)       PHAGE_Clostr_phiCD211_NC_029048: Cell surface protein (fragment); CDIF29627_02682; phage(gi981220894)     4.46e-86            ClostridioidesdifficileMELKKLLSLGLAVSMFAAGPISANALDTIYTIQGKDKYETAALIADEQNYTTAILINTDSTMADGLSASGLAGATNAPILLTKKNNIPNATLKRVEKAKKVYIIGGESSIDKATETLLKDKGIEAKRLQGSDRIKTSYNVAKEINSINKVNKVILTNAFKGEPDAMSAASVAVRDKAAIVLTDGKSVPFNTTGVESYVIGGTSSMSDKLVNDTNSTRLGGVDRYDTNKKIVNKFYNGAKEFYITSGTDLVYALVASPMSKNNPIVLVDIGSNKDILKNAAKVTGIGNLSDKIMLECENTINNISLPSSNKNIICGLKIDFDSKHIIWQDKGSYLECYDDNLEYYTEKYKDPTVPINIENTSTQNLDVTKLKVYGEANSTLYMGQYAKIKMDFNSFGVLKPGEKCTIYLDIISLDPSRSMTLTFSYVGDKENYKYEQGLASRILFYNPDGEDFFEYK
2824801..2824813                   attR                                                                                 N/A                 GTACATATATGAA
2824992..2825414                   PHAGE_Clostr_CDMH1_NC_024144: putative integrase protein; CDIF29627_02683; phage(gi640884898)     4.78e-57            ClostridioidesdifficileMTFVERCYKYIDMNKNNWSPYTVTNTKSWVKNYIEPFFKNLKLTEVNPSSVQAFVNYNFNNSTFTSAKVRYSFLSSVISEVYRLREIQENSCDFIKLPSKEKYSTNEIYNREEVLLLIEKLLGNNIEIPILLMLLLGLRM

#### region 4 ####
3573667..3573678                   attL                                                                                 N/A                 CATATCATATAA
complement(3580246..3582273)       PHAGE_Mycoba_Panchino_NC_031281: hypothetical protein; CDIF29627_03318; phage(gi100028)     5.84e-08            ClostridioidesdifficileMSIDNNFNHIAFLWNIAESLRGTYKEEDYRKVMLPLIVIRRFDCLLDDYDREIVKSVYKEYDFLPEEEKDELVIVDLKENHNIDLQFYNVSDFTWKKLLDDSENIKSNFEEYLNGFSNNVKEIIGKFKFKDEIAQLDKKDKLYAVLSKMYEVDLHINSVSNNEMGYIYEEMLRRFTENSAAGEQYTPREVIRLCMEMLFMGKENFLTEEGKVISIADFCCGTGGMLSIAEDYVEKVNPSAIVNVYGQELLDESFAICQADMIMKGQNPDNIRLGNTLTQDRFSGEKIRFLISNPPFGVTWKDEEKKVKEEADLGFDGRFGAGTPRVSDGSLLFLQNMISKMYDDEEGSRIAIIFNGSPLFTGDAGSGESNIRKWIIENDLLEGIIALPTDMFYNTGIATYIWVLTNKKEDKRKGKIQLVNASEYYQLMRKSLGNKRKEISLEQIEEIKEIYERFEESENSKIFDNEGFGYRKVTIERPLKLSFRVNEEAIENVKNTTQFINLSVSKKKDEEVKVKEEAEGRVKQDKLLKLLESFDSEFEYMKRNKFIKDLKSKSKLYDVALSAGLIKAIVNAIGVRNEDAVVCKDAKGNIESDSSLKDTESIALKEDVYEYFEKEVKPHVEDAYIDESSIDNIGYEIPFTRYFYKYEKLKSFDDIMKEVESLESEIALEIRKVLG
3582590..3582602                   attL                                                                                 N/A                 TAATAAATATAAT
3582735..3583214                   hypothetical protein; CDIF29627_03319                                                N/A                 ClostridioidesdifficileMFLNDIFDIIKFNKKSPIEQLYVIQEEEKPDIKEAEEYYRCNYRFYNSLKEMDSIENIKTEKTRIKTVLDSKNNPSIPFAIAIIAAFISIFFSLLTNNIIKDFFTACSVIGVFFGTYLCLICESQQKWDSRQKFYMSSLQVLDNMESKKLKERKYKKRR
complement(3583243..3584055)       PHAGE_Clostr_CDMH1_NC_024144: putative endolysin protein; CDIF29627_03320; phage(gi640884891)     0.0                 ClostridioidesdifficileMKICITVGHSILKSGACTSADGVVNEYQYNKSLAPVLADVFRKEGHKVDIIICPEKQFKTKSEEKTYKIPKVNSGGYDLLIELHLNASDGQGKGSEVLYYSNKGLEYATRICKKLGTVFKNRGAKLDKGLYILNSSKPTAVLIESFFCDNKEDYEKAKKLGHEGIAKLIVEGVLNKNINSEGVKQMYKHTIVYDGEVDKIPATVVGWGYNDGKILICDIKDYVPGQTQNLYVIGGAACEKIGTITKEHYTMIKGNDRFDTLYKALDFIDR
complement(3584055..3584312)       PHAGE_Clostr_phiCDHM11_NC_029001: putative holin protein; CDIF29627_03321; phage(gi971764687)     1.83e-52            ClostridioidesdifficileMDNLISFIPEQLLILVAALYVIGAGCKKYKQLDNKYIPVILLTLGVGFSVWMLGLNPSAVLQGVICWGISIGINQTYKQLKEENK
complement(3584332..3584562)       PHAGE_Clostr_phiMMP02_NC_019421: hypothetical protein; CDIF29627_03322; phage(gi414090397)     6.63e-48            ClostridioidesdifficileMNEELFEADLKRHETRINKHGEEIDELKIANIESKAELKALCENLNSLTSMLKWLIGTMITTLVGFFIFAIQKGIF
complement(3584633..3585166)       PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CDIF29627_03323; phage(gi971819995)     9.06e-39            ClostridioidesdifficileMTFKELVNKVRNLVLEAKNVTIEDTENNFTSDNVEGALKECIDRADLAFQSADSGKELIATAIGSPATKDNTFAELASLIGDRKKFKMGNIQLTMEQKKANLEIDFEPEILIAFIGEIDYSRYNTATYYKEGVLLLEGRINSISFKILNENSIYSIVMNPPYNVSTAPLGVTWYAIK
complement(3585200..3585382)       PHAGE_Clostr_phiCDHM11_NC_029001: hypothetical protein; CDIF29627_03324; phage(gi971764685)     2.65e-31            ClostridioidesdifficileMNINNVVVRILAERILGGGLNPLKNREFELDDVTNVEYRKAVEDYIIRESGVVEGAEPTI
complement(3585382..3585675)       PHAGE_Clostr_phiMMP04_NC_019422: hypothetical protein; CDIF29627_03325; phage(gi414090465)     8.64e-59            ClostridioidesdifficileMNRANRIIYDQTGKILLQTGEATGDILEHDTITKLHCIDIPYGSIDYMQNRIVGINIETKEPILEEIPIFVTEEEKRIQELENQILIAENEKVGGIL
complement(3585689..3587386)       PHAGE_Clostr_phiCDHM11_NC_029001: hypothetical protein; CDIF29627_03326; phage(gi971764684)     2.16e-153           ClostridioidesdifficileMATEWNFDFKAEAQPITLKAGKYKLECWGAHGKVWGGDSQSSGGYSYGELTLKKETTLYVYTGATGSSNKYEKFTFNGGGLGVNNGGGGATDIRLVNGDWNNEQGLLSRIIVAGGGGGAFSKTPAGKGGGFKGGNSTNDDNSSMLIVPGGTQYDGGRGYCDEWDGVFGCGGGSILGLERGKYPYNSGGGGWFGGAGARNTSSGGGGSGYVLTKDSYKPVGYIPTSEYWLENVGSITGGNTAKVNGYAKITLLQALPILTISSYNSTQATFKADHTDPTLLTKIEVFIDDTLKETITTDLTLEKTINYTLEDNALHTLKIVVTDSNNATAEKVLSISKNIMPLPENVNLQDISTKLTEVNAGFKSGKTSIINTLALKNIEASLNNTLIELSEKIKISFDSSDASVQDLMNQLTQANNTISQLNTKYKVASGRTSTLTDTTSTAYLYVNSQSNPNYPINPGGWVNIKGLNFIPNIFFAECECTTNSPTQFYKYLIFATYLIPSLSDKDFVITTALRKTNSDTKFTADSQVYINNRGNTYINNQGVYVPAYRPSVSYTLYNWYAIKFV
complement(3587403..3588404)       PHAGE_Clostr_phiMMP01_NC_028883: putative tail fiber protein; CDIF29627_03327; phage(gi971819991)     3.97e-165           ClostridioidesdifficileMAEQKYYTLLTTIGKASIANATALGNKVDLVKLQLGDGAGTEYNPTEEQTSLKNVVWEGSVNNVKIDEENPNWIVIETVIPGSVGGFMIREVGIFDSKEQLIAVSKYPETYKPTADSGSVKDLVIKIILVVSNTSSVNLKVDPTVILATLKDIQELDTKIDTTKTELTSNIETAKTELNTRIDTENEKQNIKIDQLVAGGVNVSHTHIIEVADWILNNETNMYEVTINHPLLTKRILIALYDEIGEALTPNARAIDDNSILVRNEENIKMYVYLINGNAETHFINATVDDNRVSEMTTYSSKKIEDRLVNIEEKLSGNLSDIATSVNELITYC
complement(3588406..3589023)       PHAGE_Clostr_phiCDHM11_NC_029001: hypothetical protein; CDIF29627_03328; phage(gi971764682)     2.50e-128           ClostridioidesdifficileMKLIDKLPSFYNNDITRKIQEAYDIELETLRETYDDTFDQFFVDTATWGLDYWENILSIKNRFDLSIEDRRSNIKAKMRGKGTTTIEVIKAIGEAYTKTNVDVEVFSNLFSFTLSFITNNCSYNTILELDKKIEEIKPCHLEHKFEMILFNQNDMFAGSTTNTGETVTIYPYSPTDITSFGELTITTGNDRSMEKVTLYPRQEVV
complement(3589020..3590075)       PHAGE_Clostr_phiCDHM11_NC_029001: putative baseplate-J protein; CDIF29627_03329; phage(gi971764681)     0.0                 ClostridioidesdifficileMYSSQTYDVVKNRTLSNIDLDIYKGEGSFLSDMVSPVNSELAKFYIELSYLHKKAFIEDNFDDFLDKRVNEFGVYRKLGTEATGEVIFEGKVGTTIQNGTIISYNELLFVVIKDIVISSEIEQNTSPVQALEIGIRYNIPASTEFKLQDEINGITKIYNDLAFRGGTEIETDKELKERFYKIQKNQATSGNKAHYEAWALEVEGVYNAKIYPRWDGPGTVKVLIFGENNQAVDSEVIERCREHIEEEMPIGPMLTVLTPSVLDISISASIKLETGYTLDFVKESFLESINSYLINVNKEIIYTKVSAILASIEGIHDFSNLLLNNKAENIVFEEDKVPSVTNLEFSEVVVQ
complement(3590068..3590496)       PHAGE_Clostr_phiCDHM11_NC_029001: conserved hypothetical protein (XkdS-like); CDIF29627_03330; phage(gi971764680)     1.50e-89            ClostridioidesdifficileMSTIFPFIGVPEDYILPKTEELPIFREVAWNFEKDKPILENGDFKIVEGNEAIKVWVYKCIKTNKYEHEIYSWGYGTELSELIGQKYSKGLTESEASRYIKEALLVNPYVLDVNISNTRFIDDLLSVDIVINTIYGEVEVNV
complement(3590496..3590822)       PHAGE_Clostr_phiCDHM11_NC_029001: hypothetical protein; CDIF29627_03331; phage(gi971764679)     7.41e-62            ClostridioidesdifficileMANPINEFIGIIREEGKYHNQPSFFIGKIKSKLPDLKIEVNNIILEKNDILIDSWMLDRQIEIFNTETNQEHKHEVKNPFIDKFELDDTVIMFKISDKFAVVSKLVSL
complement(3590838..3592355)       PHAGE_Clostr_phiCDHM11_NC_029001: putative cell wall hydrolase protein; CDIF29627_03332; phage(gi971764678)     0.0                 ClostridioidesdifficileMIINRSKDSSNNSISFVSKDMGFLLTQSEVSYNFKDKLVEDIAKQVFNDNKLAVGNIPKTNVKYTKMFIGVTGYDTIMSAYTEASKTTKKKYMIESNLDKFNVIEKGTITLNVMFEEGSNLINTSFSESMENVKNKVLVVDQYGNKISEKVDDKIFKDVGVIMQKVIQQQENSTVDIESEFKGIEQTCSLKGYGDVTCITGRGVKVKDRYTGLVGLFYIDTDKHNWDSNGNYEIDLDLNFQNIMDEKTAGQDEQKESSGLNGEGTLNGKEVKAEFTAYYPSNNAMEGGYYQAMDGKRLVPSNNTCAAPSKLKFKTKIQAKCPGTKIDGKTYTVTDRGGAIDLKNGVYRIDILMSSEKECNDFGRRKGTIIIGDGTGYTNATGKAKELISIAKSKLGCKYVWGATGENTFDCSGFTQWCYKKIGISIPRTASAQSKAGKPVDLNDRSKWKAGDLLCRVSGGSNNHVVMYIGNNQIIHSPQTGDVVKIQSVDSYRKGKAYTHVRRYL
complement(3592595..3593230)       PHAGE_Clostr_phiCDHM11_NC_029001: putatice cell wall hydrolase/LysM protein; CDIF29627_03333; phage(gi971764677)     1.22e-130           ClostridioidesdifficileMEMWLRQSNDAFRFPIFPASFEISGNINTSTTNVLRLGEVIICGGTGLRTTEISSFFPSRQYHFCNYKDFPQPYDCVNKLKRWMEQGLILRYIITETDVNMEVIIESFKHGKQDGTNDVYFTLSLKEYKRIQIPSINSSDGKIEVVKNVPVTKGFETGKQKTHKVVKGDNLWSLSQKYYGNGDLYEKIVEANKELIKTADIIKEGWVLIIP
complement(3593230..3594984)       PHAGE_Clostr_phiCDHM11_NC_029001: putative tail tape measure protein; CDIF29627_03334; phage(gi971764676)     0.0                 ClostridioidesdifficileMARRHISAVISLKDNMSATMRGIRREQKQFQNEVRRTRNEMRSASRERMRIRMDATPAHRTIQNLRQKLAPLRTKLVKAVVIKDLATEKIERIKSNVKSFGKFIARPAIKLKDETKGMIDKIKNRLTSLSTIVPVGAAIGAAGMAVKSGMELEQQQISMRHFMGVGNKGKSSKELDGMSASYLKDLRNNANATPFETGEVISAGTRSLQIAGGNTKDAMQMVKLAEDMAALNPGKSVGDAMEALADMNIGEMARLTEFGVKASSTDDPKEVQKKLETMYNGGANKLAESGSGLLSTIMGKLKSNIADIGLGMLEPLKPVMTGLIGFIDQASPKILEVGTKITAGIGMAIGWIQQQMPTLAPIFQTAFGAVSSIVSTVAPIIGQVIGALSPIFMGLLSVASSVLAGIASAVKTVAPVVSSLISKLAPIFKNVGDTLKSMGKIFKNVFDSVMKIVKKASDYIKPLVDGITGAAKGISDGVSWVAGKLAGNATGTKYWSGGLSVVGEHGPELVSMPRGSKVFTNAESKSMINKSIPNFRQVQGENTNYNITIPKIAETIVIREDADIERITSSLIKKIQMAKMGGVV
complement(3595168..3595551)       PHAGE_Clostr_phiCDHM11_NC_029001: conserved hypothetical protein (XkdN-like); CDIF29627_03335; phage(gi971764674)     1.55e-74            ClostridioidesdifficileMENKKEMITIEDILRRKEYFAKKSEETKQLYIPSLGGNIEIAKPDRELCIDVTEMENSIESDKYFVYEIVKKPNLKSEKLHTEFGCKDNPLDIVDVLFETGEIADIAKIAASFAGFGVVEEVEDLKN
complement(3595600..3596049)       PHAGE_Clostr_phiCDHM11_NC_029001: hypothetical protein; CDIF29627_03336; phage(gi971764673)     2.40e-98            ClostridioidesdifficileMSKENIVGSSQISGTWGKLWWDGTLIAEVLSFEAKVTANREEIQFGMSKDSKITSISGEGTVKLGKVYSRGKKKLLEAWKKGEDPRSTLTSKIKDPGTPGKQAETVTINNVWFNELALAQFEKGGKIEEELSFGFTPNDSDMMDEIEEI
complement(3596062..3597129)       PHAGE_Clostr_phiCDHM11_NC_029001: putative tail sheath protein; CDIF29627_03337; phage(gi971764672)     0.0                 ClostridioidesdifficileMGLPSAIIEFQRRSKTVKFRSRRGVVALILKDSTAIKKSYSINFLTDINETEFTKENYDYIKLAFLGKPSKVIIEVINDSVDSERSLDDALKALRENKFNYLAIPFISEEVDKTKIVNWIKIARREKEIYKAVLPSVNNANEKAIINFTTAGIKVGEKSYTTAEYTARLAGILAGISLSESCTYFALDEVTEIEPAENPDEAVEKGKLILINNNGIRIARGVNSLITLSKEDTEDLKKIKIVEAIDMIQDDILQTWNENYVGKVTNKYDNKILFLSAVNNYFKELQRDEVLDNSQEAYVQIDIEAHKKYLKEKGIDYSEMTEQQIKEANTGSYVFVEGNITITDAMEDLKFKIYM
complement(3597144..3597560)       PHAGE_Clostr_phiCDHM11_NC_029001: hypothetical protein; CDIF29627_03338; phage(gi971764671)     1.65e-88            ClostridioidesdifficileMLKIVSVKKAIVEKLKSLNIKIVANEIRSGFEKPAFFIQIIPVEMSSDPNFSNSTLLINIHYFSKEKTELENLKMIDKLNVLFQDCILEIDGGELTIEEKSVEIYENVLQYKFNLQVVEIIEEDESKYELMKELEMNI
complement(3597572..3597985)       PHAGE_Clostr_phiCDHM11_NC_029001: hypothetical protein; CDIF29627_03339; phage(gi971764670)     3.25e-82            ClostridioidesdifficileMSNTDFNMNGLDDYTNKLFKRIVKEYPKKAEKLMNTSLGKCKGEAIARTPKSSKKPKKYKRAKHMKDNWKTKVQSKNGNCTGVLKNDSPHAHLIENGWATKNGGYVEGKHMLQQTMEHQRVKIDKRIEKMVDETFNL
complement(3597978..3598316)       PHAGE_Clostr_phiCDHM11_NC_029001: putative head connector protein; CDIF29627_03340; phage(gi971764669)     1.53e-73            ClostridioidesdifficileMDVGKLTQRIKIQIYGEIENDIGEITKGWSTYKKLWANKSLLRNSNNYVLDKENIEYSYRFKIRYRTDITEAMRIVCNDVVYDIKHVNNIKELNKYETNIDCILYKEGVYNE
complement(3598318..3598605)       PHAGE_Clostr_phiCDHM11_NC_029001: putative head tail joining protein; CDIF29627_03341; phage(gi971764668)     1.53e-48            ClostridioidesdifficileMIVSLEEIKEYLRLEADYKEDDNLLLSFLKAAEEDLENRTGKVFNENNKSELVGLYIKMYSAEQYEKRGATESNSEKVRFVLESIISQISICSRY
complement(3598615..3599883)       PHAGE_Clostr_phiCDHM11_NC_029001: putative capsid protein; CDIF29627_03342; phage(gi971764667)     0.0                 ClostridioidesdifficileMTREEYFKKRQEMIDEAQKLLDDEVGEEGAGEENTEEAEKIANRIKALDEEYERNVKARANLKALQDNVKIDPTIFNLTNNKGKIEGIEDTTVKDKQEQYKNAWAKDMLGKQLNSEEQEIFNSINSAYRAEVQTSENNTILIPKTVASGIWKEIGDMYPLFGDASPTFVAGDLTIIAEEDGGDDAAWYDEETEVKEDGYKLKEITLRGCELAKDITVSWKLKKMSIDEFVPYITSLLAEKMGAALAKAIVDGKGKPGESDSFKPQPLGIKTALSKEASKAQIIEYTDKIAYTDITKLMSVLKKWSNGACIYANSTTIWTQLAEILDTTGKPIFIPDAANSDGVGRMFGRVVKMDDSMADGEILAGNIAKGYAININENVTLYTDEHVKSRKTDYLTYSLVDGNVISNKAFGMIVKKTSAVAK
complement(3599876..3600613)       PHAGE_Clostr_phiCDHM11_NC_029001: putative Clp protease protein; CDIF29627_03343; phage(gi971764666)     4.02e-135           ClostridioidesdifficileMANDNLNEFLKIKNSTETSSSLYFYGDIVCDEWDAWTEEDQYPLSIKNFLATEQGKDLNIYINSGGGSVFAGMAIYNILKRHEGFKTVYVDGIAASIASVIALAGDKVVIPENAYFMIHKPWLGLFGAYNSDKLIKASQDLDRIEEGILNVYKDNLREGIDIEEIKEKLREETWFTGKEASNYFNFEVDEKKEVAACVSDYFDKYNKMPNILKSKIDKDSNKKENNNKKRVQLRLDLLKLGGLND
complement(3600619..3601773)       PHAGE_Clostr_phiCDHM11_NC_029001: putative portal protein; CDIF29627_03344; phage(gi971764665)     0.0                 ClostridioidesdifficileMNIFKSKKKNKEAPGKVAIELITDSGNGFYSWCGNLYRSDIIRSIIRPKSKAVGKMTAKHIRSNETEFKTNPEIYIKFLLENPNPFMSGQILQEKMVTQLELNSNAFAVIIKDSYNIPIQIYPLNALNVEAIYEDEVLFLKFSLKNGKIVTYPYSNIIHLRKDFNENDLFGTPPTKVLEPLMEVVNTTDQGVVKAIKNSNTIKWLLKFKTALRPDDIKKEVKEFEKNYLQIDSDAGGAAATDSKYDAEQVKAESYVPNAAQMDKAIQRLYSFFNTNEKIIQSKYTEDEWNAYYESEIEPVGLQLSNQYTEKLFTRKARSFGNEIIFEASNLQYASMSTKLNLVQMIDRGSLTPNEWRKIMNLSPIEGGNKPVRRLDTAVVEGGE
complement(3601789..3603438)       PHAGE_Clostr_phiCDHM11_NC_029001: putative terminase large subunit protein; CDIF29627_03345; phage(gi971764664)     0.0                 ClostridioidesdifficileMTYIEEYYQKILNGEIVACSRIKQVYKKLVQDLYNPKGNWVFDEELANRPIEFIETFCKQAQGKLGEPLKLELFQKAKHQAVWGFVDKETRFRKYQEVLDIRGRKNGKTTELAADELFMLIADNEGSPEVYNIATKYEQAQKGFKECYKMVQQSKILSKHIKKRKSDLYFHANYGFLQALASNSNGLDGLNSHMVTIDELAAIKNRDIYDLMKQSMGARNQPLLNCITTNGFVREGIFDAQYEYACNVLDGKIKDDRFIAFIYELDDKDEWDREECWIKANPGLGTIKKLDFLRDCVNKAKADPNFKPTVMVKDFNMKENSATAWLRWDELNNETKFNADEMGFRYGIGCFDLAETTDLASAKVLLRKRYDDNIYVLSMYWIPFERLEQKTDEDKIPYILWEKQGLLRICEGNKINPYDILRWFREIKEEYDIYIPWIGFDPWHVDSSLLLAYENEFGKDSMIKVRQGAYTLSAPMKELRADLKANKVIYNNNSIDKWCLSNTEIKTDINGNIQPIKGVDRRKRIDGAVSLIIGYVVLKEKMSEYENMI
complement(3603435..3603824)       PHAGE_Clostr_phiCDHM11_NC_029001: hypothetical protein; CDIF29627_03346; phage(gi971764712)     8.68e-18            ClostridioidesdifficileMGGGLFKIIYEQLEKEKKIKQEVSRLKKNYKDLEKEKVKILDGLVNEAAFLKISLEETREILTKEGLTEIFKQGKQEFERERLQVKIYLNFMKLYSNVMKQLIDIIPSDMKQEEEDELIKFIKKGRLNK
complement(3603922..3604215)       PHAGE_Clostr_phiMMP04_NC_019422: HNH endonuclease; CDIF29627_03347; phage(gi414090491)     3.23e-54            ClostridioidesdifficileMAREFSQSFYNSKAWKDCRQAIVKKYLGLCAECGKLGEEVHHIKHLTPSNINDVDIALGEENLILLCKDCHSKKHKSKKDITRAGLKFNENGELISI
complement(3604208..3604501)       PHAGE_Clostr_phiMMP04_NC_019422: hypothetical protein; CDIF29627_03348; phage(gi414090490)     1.98e-16            ClostridioidesdifficileMKEIELSNKEIELIISVLDSKISSNLDKVFGDVQYSPTCKHRLRKENSIIENLIDKLIDRLNGIEVEGKENVLRIDWNMEEFEGKLKEVIEEYLCNG
complement(3604698..3605297)       PHAGE_Clostr_phiCD506_NC_028838: Site-specific recombinase, phage integrase family; CDIF29627_03349; phage(gi971819959)     1.73e-118           ClostridioidesdifficileMKRPAKPIKKQQDVLDIQDYLRYKSYRNYVIFILGITTGYRAGDLVKLKVREVKEALKRQEFTIWEGKKVNSKNIREKNRKPRTVEIRPKVTHILKKYIKNKKDYEYMFPSRKKDYPYIGVAAISKILKEAGEYFGLYDITAHSMRKTYAYKIYIDSGKDIVAVKELLGHSSIEETKAYLGLDKELYHHYSKSLDDFVR
complement(3605584..3606411)       hypothetical protein; CDIF29627_03350                                                N/A                 ClostridioidesdifficileMLYDITSINGAYKFLSEYLEVDRDYIDLYIRRNPSKYKFKKFIEEIEFIKKIKFNNLKLEDIDIILIHITTNDDDCNSIKKYGLINLIQAITLETPLSKYLKSFNIVFDVYNYLIFIDEQVFSIRDYKESKEVIRLLYLKLYDDYNINAFFYVRDFKSYGGRVHEKPEILCNLSKAFNNKNISEKWKNNIHNKCYSVKFKVRLEELEWYTFYDNIEEYKKDYTKKDLIRNELVENALSVIHEDYFKKDSKSELIAYLKREVLIPYSNIIEIEEIK
complement(3606783..3607226)       PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; CDIF29627_03351; phage(gi209901307)     1.31e-20            ClostridioidesdifficileMSDLKSESFKKAENKLYSYNRVKTEIKNLNLEIEEKENLYMGCCSIGYGEKSGTTYNISNLVESEVLKKEKEVEKIKRYIKVKEIFIEKIDNAILLLNEDEIALIKHRYFSNKKNSWNYVANKIGFSTARCKQMRIEIINKLKDLLS
complement(3607247..3607369)       hypothetical protein; CDIF29627_03352                                                N/A                 ClostridioidesdifficileMRDIKIRDIKEITLSEAYSIFKVLKCGFIIKDGKLKGFTK
complement(3607481..3607774)       hypothetical protein; CDIF29627_03353                                                N/A                 ClostridioidesdifficileMTLDLNIKELYELGFSEEFIALAKAHLLDDFIFNDVPKLSYTNVGKMYDIKKYEIFIVVNETLIYILQTQYKEEFLPVEEQILSFGTVKKMLEYVCK
complement(3607788..3608045)       hypothetical protein; CDIF29627_03354                                                N/A                 ClostridioidesdifficileMKLKKLISKLSRLEDVEIVFHINVKNIPIISSIKLSSIIMNHDEVEIYGLNNFKLYIPVDEIIDIVEYPESLILYSLSFQVIFRW
complement(3608035..3608664)       LuxR family transcriptional regulator; CDIF29627_03355                               N/A                 ClostridioidesdifficileMYEVELMELIDKSKDGNESAFESLLKIFDKDIQINANKYVNLLQGGFDYNDLIQVARIALWKALSNYSHTKGKLHPKAYFKKAIKLSMLSLLNSGNRKKHRTLNKSISLNNFISKDEQIELITLIDNNEDDIESQVISKEITRELKNKVKKDIVYQTDMQRKVISLRVDGYEGREIERILGISLKSINCHLYRARKIIKQNLGSVNYEA
complement(3608679..3610013)       PHAGE_Escher_RCS47_NC_042128: hypothetical protein; CDIF29627_03356; phage(gi100087)     1.90e-41            ClostridioidesdifficileMSSVNDLVKSTEAEQSVLGSILLDATAIREIEPILTEDMFYHEEHKIIFDSMKKIYKRNEPIDLITLTEEVKHKGHLNRVGGISYITSLSNVVPSLSNALYHANIVLDKYKNRNIIDKFNKFKLGEIDDNTLIYQLEQDINKIDKKLIKKDTSISAITTRAFDYISDGVEEGIEIGIEVLDETIGGLYQGELTTIAAKSGGGKTALALQILRNVIFQGKKVLFISGEMSDIQILFRNISSLTGIPIVKMKNRDLNEKEMIDYINALGILNQDEILDINDTVNTISGIKREIKRLKPDLVIVDYLQILDYEGKEVGEAKFAELSREMKKITLDFNIPVIQLAQLNDEMRDERPKGDRPMRSSKQIYMDSNNVVYLHRPTEKEALEYCKLIGIEDIEALRKREKSLGVKLTEIIVAKNRDGEARYTPYWYVGCRLTFKKCTMAKII
complement(3610028..3610792)       PHAGE_Lactob_Lrm1_NC_011104: DNA replication protein; CDIF29627_03357; phage(gi195661236)     7.23e-35            ClostridioidesdifficileMGELGWIKLHRALKDNPTWKACKAERKVIMITMLLLASHKETVITLNTGKKVKILPGQFITSRSSLAEKCGKDVSEQMVRSALQFFKKTNFSTNESTNGYTLVTIINWGLYQDVESKQPTSQPVVNQGSTTIKNVKNVKNKKLYVETSNEYRLAEFLFKHIRKNNPNAKTPNLQSWAKDFDYILRLDKRNLEEVQELIRFCQNDSFWCTNILSASKFRKQYDQLYLKYKNEKNPLNKKAKEDGVYNPYDTDLMI
complement(3610816..3611046)       DNA binding domain-containing protein; CDIF29627_03358                               N/A                 ClostridioidesdifficileMEVNENMQTKVVNLKTKKSRKIMTVKEFSKEYEIGINNAYEMTHIKGFPAFTIGRKICILRDKVDEWFLDNIGNKF
complement(3611058..3611495)       putative prophage LambdaCh01, transcriptional regulator; CDIF29627_03359             N/A                 ClostridioidesdifficileMLQQCQNIYQISRENARLTQEKASELLGISVESIRAYENDKRIPNNTVVAKMVSIYNNKLLGYEHVRRNTEAGIMFLPELKIKNLSSIALKLHKEIKDYLKKEDDFIDIVEDDVIDEEEEEVWNDVMNELDGIYEAIFALKFAKK
complement(3611523..3611741)       PHAGE_Clostr_CDMH1_NC_024144: putative transcriptional regulator protein; CDIF29627_03360; phage(gi640884901)     3.26e-08            ClostridioidesdifficileMRSKLKQLRIKKNLTHKVMAKELGISRSYYTSIEMGNKTPSLKTSMKIKSFLKYYKDDIFLDDKVSKRNNLD
3611906..3612253                   PHAGE_Bacill_G_NC_023719: gp62; CDIF29627_03361; phage(gi593777530)                  3.18e-19            ClostridioidesdifficileMSKFYERLAQLRKEHNLTQMDLAKIINKQRSTIAGYETDRKQPDFDTLCTLANYFEVSIDYLLGFTEDKKTYDSTLEDLEIDDDVKKITDIIFKLDEEDREAVFKMLNALTKKYK
complement(3612300..3613460)       hypothetical protein; CDIF29627_03362                                                N/A                 ClostridioidesdifficileMDFSDKIKQFSKRIEVIKENLTTEEATKTALIMPFFQILEYDVFNPLEFIPEYVADVGVKRGEKVDYAILDDGKPIILIEAKNIKDKLTKHDAQLFRYFTATEARFAILTNGIIYKFFTDLEEKNKMDEKPFMTINLLDIDENKISHLKKFAKTTFDVDVVFNIASESKYTNLIKEQLNEQLESPSDEFVRFIINDFYNGVKTQNVVEKFRPIVKRSILQFATDFMNEKLKSLLESNDDEDEKEKKKIIDKKAKEETERKNKEKTEKEKMRKVEECQKEETKIEVVKEDQQQISAEEKEAFDIVQDILGDLSCKEDITYKKEKEWLNILYKADSNLWICNIKLTSSDKLISLPNQNNEPVEYRMDEVIDIRELKDELIFVLSKYTN
complement(3613928..3614047)       hypothetical protein; CDIF29627_03363                                                N/A                 ClostridioidesdifficileMCKNKIKKAISINELKKKNKEDYDYFIKFVIKVAEKKNK
3614214..3614435                   PHAGE_Clostr_phiCD6356_NC_015262: helix-turn-helix domain protein; CDIF29627_03364; phage(gi326536884)     2.63e-14            ClostridioidesdifficileMLKQARKNKNLTQKQLSKIANISQSYISRLEQDIFINSPTIRQIISLSKALDISAYKLSNYFINKENAYNKKR
3614446..3614458                   attR                                                                                 N/A                 TAATAAATATAAT
3614483..3615661                   PHAGE_Bacill_phi4B1_NC_028886: site-specific recombinase; CDIF29627_03365; phage(gi971821285)     1.19e-41            ClostridioidesdifficileMATKRANGEGSIVKNIRNGVQIGWRASISIGRDEKGKLIRKQFTGKTQKEVKEKLDIYRTKMLLGSIVSADKITFEDWFYTWLFDYRAKDLKPKSFERYEGIYRNYIKDTELGKIKLIDLRATHIQRYYNKLMDVYNKPASTIITLNTRLKPCLTEAEKQGYIQKNYCKMVTLPSDNKIKEVQILSITDQKKFIDSIDGDKFEILFLLALSTGLRLGELLGLKWSDISFDDESLTVNRTLQRVTEIKKDGTREKKIIEQYPKTKNSIRTVPIPRNILVKLKRHKIQQTEQRLLLGDAYINNNYVICNDTGLALNNNRPGKILDSLLKKLNIPKIKFHALRHTYATRLFEAGVPPKTVQTLMGHYDISITMDIYTHVMHNTKQDAVDKINDIF
complement(3615805..3616154)       tRNA                                                                                 N/A                 GGGGGCGTAAAGGTTTCGACGTGGGTTTGGAACTTGAGGCTGCATGTCGTGTTACTCTGGGTCACGTAAAAACTGGGGAACTTTAAAATAAACGCAGACGATAATTTCGCGATAGCAGCCTAGTTGCTGCTCGTCCCTCTTAGTCCTCCTGCCGACTAAGACTGGACGTCATTATGCAGGGAACTACTTTAGGGGTGTCTCGACTTAAAGTAGATTAATTGGGACTGGCTAAGCATAGAGCCTGCCACTTGGCGCTATGTGAGGTGAGATATTAGTGAAGTTGGCTAAGCATGTAGATGCAGCAAGGAAAAGATTTGCGGACAGGGGTTCGACTCCCCTCGTCTCCACCA
complement(3616312..3616767)       PHAGE_Staphy_StauST398_5_NC_023500: SsrA-binding protein; CDIF29627_03367; phage(gi588498309)     1.58e-50            ClostridioidesdifficileMAGKKILATNKRARHEYFIEETYECGIELKGTEVKSIRQGKVNLSDGFASVDNSEVFLKQVHISPYEQGNIFNVDSLRVRKLLLHKHEIRKLIGATTIKGYSLIPLSLYLKNGKVKVEIALAKGKKLYDKRQDMAKKDAQRRIEREMTGKY
3627182..3627193                   attR                                                                                 N/A                 CATATCATATAA
