gi|00000000|ref|NC_000000|  Thermus brockianus strain GE-1, complete genome. [asmbl_id: NC_000000].2035182, gc%: 67.07%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1462157..1462203                   attL                                                                                 N/A                 ATCGCACTCAGGAGGTCACGGGTTCGAGTCCCGTCGGCTCCACCAGC
complement(1462279..1463412)       PHAGE_Bacill_vB_BhaS_171_NC_030904: hypothetical protein; A0O31_01615; phage(gi100035)     8.78e-38            MARKRPPGEGSIYQRKDGLWVGAITVGYTPRGNPRRKVVYGRTRQEVARKLAELQVLHHRGLLAEPAQITVRDWAEDWLKRKAAEVRPRTLESYRYHLAKAIPSLRDPTAYDRFGRMRLQSVQPLHVRRHLDGLRLTPHAMKNIRWLLHAVFEDAVRMELIHRNPVAPVKVKGPPRKSPGRTLEPDEARRLLAALDEHPSPLAIALRLMLTCGLRRGEALGLRWEDVDLEEGVLHVRRAWAKVGGKGVVSEPKTSSGYRAVPIPPTTLERLRAYRESVQGLSEEEARRSWLFPGRDPSQPVHPDAPDHFLRRLLARLGLPQVRVHDLRHTYGSLLLAQGAPVELVAERMGHANPNITLGIYRHLLEEERRGWVLDIG
complement(1463414..1463881)       hypothetical protein; A0O31_01616                                                    N/A                 MPPPPVLPGLFWVDITLNLEKEPYGFRFTMEPSNVIPGVKYHRAVKVDPDTGAEMWVEIATYGDKVLHYEVSVSGLNAEPTASWLLPYLATAPFDGNPQLESKAWAEKALGQVRQGAPLERRVGEAVFVLLGNPPTSYTLEVSHRDYESWSQHLR
complement(1464176..1464805)       PHAGE_Thermu_IN93_NC_004462: hypothetical protein; A0O31_01617; phage(gi227811308)     4.07e-15            MAIRKRIRELGLSQPKVSRMVGRSASWLATQVLPDPENAIRYLWAKDPEAFNRLLRVLQWTPEEFSRETGIQLPGAEIPGSIPVVRYRIPVIDAGAGPPMWNEGAEYITLHIPELRGKREDELFAVRVKGDSMEPTLRDGDIVVFWTGGAPEPGRIVAVHVHWDGVVVKRLQRYNGSWYLYSDNPDHPPVPLTEHDRILGVAATLVRKM
1465139..1465402                   Helix-turn-helix domain protein; A0O31_01618                                         N/A                 MPNPTTTPQTALPHPVAYNIAQAAKVLGIGERTLRYLIRAGQIRVARVGRRVLVPHSAIVEFLERGGVEQVLYGHVAVRKARVEALA
1465417..1465716                   hypothetical protein; A0O31_01619                                                    N/A                 MTRQAQVDYTTALRRVLEKYPTLPPRERGESWEDYLQRLEDRLRVLEYAWGDWIRLGPPRDWIYNPHWAWAWPKARGEILTLRMALPELRRAIKGVRDA
1465709..1465897                   hypothetical protein; A0O31_01620                                                    N/A                 MRKGRIYRVYKKRSPQDEGYVECQFCGVLVPLPLVRFSAFGGEEMCPGCKRREEEYRRKRYA
1465890..1466381                   hypothetical protein; A0O31_01621                                                    N/A                 MRSWRAAWYQANPEGLVGRLRDLARSRPEAARALATRLEREGWGPWWELLGDLQAPRALCPVCEGEGEVLTTGAVASGWHTCPTCGGQGLMPYPLTQWREYCHECWGEGGWWAYHPHRPDDDIWVECPECGGIGVFTRMGPAAYAEVRGRVEEDFPPDAPLPF
1466397..1467269                   hypothetical protein; A0O31_01622                                                    N/A                 MAHELAKTTEERMAVLEKVVVEGDLSKLTPAERVIYYRNVCESLGLNPLTRPFDYIVLNGRLTLYARKDATDQLRRIHGVSVRIASREFIEPLGLYVVVARATTADGREDEAIGAVSVRGLSGEALANAIMKAETKAKRRVTLSIVGLGWTDESEVDTIPGAQTVRVDPETGEILDAPARPAPEEKENGGATGKQLKLLAVLMGKVGLGREEAHRYVSALLGRQISSAKDLSKEEASRVIDHLQQVAGWFDAMEVPEDLRREVMTDAARHGDTFDSEETLRVVVEGYKAT
1467949..1468500                   hypothetical protein; A0O31_01623                                                    N/A                 MGGRFRWPEPPEAMVRALKEAGVWERLASLRRYARDQRAWLEWLAGPLAALWRGNPEAFPAAIGEALDALASRPEVKDPLSYLLAVARKRLTPNGEAARGEEAPAARALRLLREGQEPSGEDLVELLRQRGVPTKAGLGRYNGMSADGEWVYARLGGDIIAVSRREAIRRLVDGGHEEVAHAG
1468490..1468864                   hypothetical protein; A0O31_01624                                                    N/A                 MLDDAPELVLDLGPCPWCGEEELEYAGNGLAAGRRPPSLCCERGAVASLLRHAAAVRATAEKEREEVAEEYRALLQDATKQFGSQALLAVLDEVARAGVIGWRSAGAVRAALERRERTPSGTGR
1468880..1469293                   hypothetical protein; A0O31_01625                                                    N/A                 MGEVVVALCLGTGTWEAVVLAGGRVVGYGSSPDYGVAVKAAILEARAKGVHEEEGMKILGRAEEALAHLAEAVGCYCPPELALEAEKWLDDLREALREGAEASRALEACRARERLSSQERLRLKEAVIRAREILERI
1469290..1469460                   hypothetical protein; A0O31_01626                                                    N/A                 MTLADLLLAYVLAMLTGLAVLLRPRREPLPEGASVGFLVLVGVLWLMFFLALVLWR
1469421..1469801                   PHAGE_Shigel_Stx_NC_029120: crossover junction endodeoxyribonuclease rusA; A0O31_01627; phage(gi985761276)     5.15e-27            MANVLPRARSVALEATLPWPPSVNHYWAARGNGRYLAPHAQRWHKEAWATLRAAWRGKPMRGEVAVLVVLHPPDRRRRDLDNILKAVLDALVHAGVLQDDSQVAELHAVRREACRPGRVEIRVERL
1469982..1470464                   hypothetical protein; A0O31_01628                                                    N/A                 MPRRCTICTHPQREEIDRALASGQPFRTIAVRYGVSATSLKRHRAHVQDAIQQAIEAKVVSVGASVLDRIRELNREARSLLEEARSKGRYAAAVQAIGAATRLLELEAKLLGELDERPSVQVALVASPEWARLRAVVLEALAPYPEARAALVERLEAEGA
1470457..1471710                   PHAGE_Ralsto_RSP15_NC_030948: hypothetical protein; A0O31_01629; phage(gi100038)     3.53e-32            MRELAQDLALALDPTVVLKRAGVIPAPWQRRALLSPSPRLLLLASRQAGKSTTAAALALHTALVRQEATVLLIAPSQRQSQELANRVRRFAQVLGLELQAESALRLELRGGSRVIALPAKEGTIRGYSAHLVVLDEAAWIPDDLYAAVRPMLAATRGRLVAISTPFGTRGWFWREWVEGEGWERVMVTAYDVPHLDPAFLEEERRALGEWRFRQEYLCEFLSSGGAIPEEDVERATRLPGPEEPREGRRYVAGLDLARVHDWSALAIVDATEPEAMRLVRLERWRAEWEETVERVLSLVRPYAPRLLVDATGVGDPVYERLRRAYPNVYPYRFSHATKPPLVTELRLALAEGRLLLYPDPALLGELRALEARQTTYGVSYEAPSGAHDDTVMALALAVWAARHAAPTGGPYRVKGRW
1471820..1472224                   hypothetical protein; A0O31_01630                                                    N/A                 MAGRDAGAAVQVQALRAYVRERRGRSDVDPALLVWGALNARMRRVGPPGRGRREEVERLVGQAGSYALRVGGRWYPWDTVREALRRALELDRPPHERSQEAKDLAAFLWSTTPNRVGYVLARPRLLQIWREIHG
1472217..1473644                   PHAGE_Pseudo_D3112_NC_005178: portal protein; A0O31_01631; phage(gi38229139)         1.12e-17            MAKEKVNTYQEPRGWLRAEWTPAEVRTVWAIAQQGDMRPVAELARAILGDDRAQGVLSVRVRGLLGLPFTLEPAPGGERWAKLLEERWWSLFPEEALHDLMVWALLTGVGLAALSWVEEDGLLWPKLDVWNPGALVMRDGAWRVRDATGQEHLLERGMWLLYTPYGPKRPWEKGLWRTLALPWLVKLDAIRYWARDNEVGALRVAYTDGPTGETGKELAQLLADLGGDTGLVLPEGWRLDVLSPSAEVWRSKAEAIAWADRAMTIAILGQNLTTDVQGGSYAAARVHEAVRADLLEADVETLATGLRNGVLALWAEWNAGDPALAPWPRWDPRPPEDLAARAETLQRLAQAVATFAQAGANVDLDALLEEYGLPVRKGQGLVRLASGDPPQEAPGFVQGQLYADALADRLLSRLPDPLAGLEAELAQAQSYEEVRGLLMRRFREASPEEVAALTERALVLAGLAGRYSVIRDVER
1473631..1474770                   PHAGE_Rhizob_RR1_B_NC_021557: head morphogenesis protein; A0O31_01632; phage(gi514231161)     2.67e-17            MWSVSADPLRFQEAAEWFRGKVPLLKGEWGQLTQEARRRAFTAAGVALLDRLALLHQSVLRALEEGTPLEEWRQEALRVLGGRWSYGHLETIFRNNVQAAYSAGRWDQLQDPAVRRSHPYLMYDAVLDSRTTEICRARDGVVRPADDPWWRSNWPPLHHNCRSGVRALTRAEAERRGVARALPSVPPQEGFGLSPAEEEWVEGYAKGQRDAARLPWAPAFAGEPPTWRSYGLPERLDPTPAPGDLLPTLAEVGEARFLALLEERLGGLPALLVDPTGLPVLVDRGLVGHLKGDGRERFLAWLPDLVRTPQEVWLLPLQHERRVVFRQRYLKVYREGRDRHLVLSAEVHRGALVALTFVESRDYAYLQNQRVGFLRWVAK
1474951..1476267                   PHAGE_Ralsto_RS138_NC_029107: Mu-like prophage I protein; A0O31_01633; phage(gi985760943)     3.33e-16            MTRHALTIPVPGGEPPREFRIFPFGRVETTKGVFLFDQEAARRVMQAWRDYGNRLSIDYEHQALEPVSNGPVPAAGWFDLEVREDGLWAVNVEWTPRAMELLRNREYRYFSPAFYVDEEGRIVELINLALTNLPATKRMEPLVAKAVGFEAGPVHEGSSWDADAAVARVRRWASRDGSGDKETIDWARYRKAFAWYDATDPESFGSYKLPHHDVVDGRLVVHKRGVYAAAAVLQGARGGVDIPEAELEAVRRHIAAHYHQWGEKAPWEREETRRTRMEKVLRLLGLREDAGEAEAEAVLRRLMAFPERVFALTGTRREDEAEAVLLAWKQAHEELPRVQERLAALEEERRKERLARLIEEGKREGKLTPAMLSWAESQTPEALEAFLRVAPRVVRANGLEEPEPGGLDWNQMTPAQRAELYRKDPEAYRALRRRALGY
1476280..1477140                   PHAGE_Strept_315.4_NC_004587: putative major capsid/head protein; A0O31_01634; phage(gi28876339)     9.36e-18            MPVTTRSDLFIPEVLADAVAGAWPDRVALLGTEAVVESRTLPGDAKGGDRVRIPYFGVLGEYEVVGEGQSLTPTKLTMTTEEAVVQRAGKLFEITAWARMAAMYADPYAEATRQLLEGARRTFDRALVEAAASTTGGGVQTVNASSGTISYDAIVDALSAFGESEDSVAAVVMHPKVLNDLRKAKSNDGMPLFLNPQDGGRPRVLGLPIIVSRRAPVISGTPNTYVTLFVRRGALALWYNGTPSIETDKDIASDTLLAAVNVYFVAHRYSRLPGDTDPVVVRLVTR
1477143..1477412                   hypothetical protein; A0O31_01635                                                    N/A                 MGYFAIRRMRERLQGAGAPELPREGAPTPEGPAGGTPLPEGFPARSLLLANGYATLEAVREATDEALLGVKGIGPKLLAEIRDALRQQG
1477390..1477782                   PHAGE_Entero_Mu_NC_000929: hypothetical protein; A0O31_01636; phage(gi9633527)       1.04e-10            MPYASRADLRALGLPEAVLASIPEAEQEAALEAASALADSYLRARYDLPLASWGRGLTRAVALIAAYDLMSRRGYDPTRPGQENLRMRYEDAIRWLEGVAAGKVDPGVEDATPEVSSTAVQAVTRERRWP
1477779..1478300                   PHAGE_Rhodov_vB_RhkS_P1_NC_031059: hypothetical protein; A0O31_01637; phage(gi100042)     2.38e-17            MSVRGDFDELKRLLRGFERLTRPGALREVSRAAAEGAMSALMDRFRTATDPYGRAWPPSLRAQLEGGQTLSDTGRLRRSFSVQSVTARGFAIGTNVRYAAAHQFGAVIRPRRARYLRFRLAGGRGTRKGGRGRWVTASRVELPPRPFFPEGRDLGEYAERMREAIAAWLEAEL
1491281..1491327                   attR                                                                                 N/A                 ATCGCACTCAGGAGGTCACGGGTTCGAGTCCCGTCGGCTCCACCAGC

#### region 2 ####
1906888..1906900                   attL                                                                                 N/A                 CAGGATTTCCTCG
complement(1909179..1909967)       PHAGE_Haemop_HP2_NC_003315: tail sheath; A0O31_02110; phage(gi17981837)              1.27e-05            MWAALGALADEAEANFRYIFFLTETLPPGNDPDAWVNARLSEKASFSHKRVMIVAAWGEVVDTLTGRLEVQSLASRVGARISSQRVHVSPAWVQLGPLSGVVQVAPFVDTPFGKQSLFNNAHALALDQAGFTTVYRLIGRDGWFLVDGRTAAAPTSDYKVIQNRRVMDKATYQVRQALLDFVQWHVDPTDLKASLASLLARANTPLRLMQAAGEIARGRVVAPPGQDILASQTLRLQIRIVPLGYLREIVMDIGFENPFLVG
complement(1910605..1910802)       hypothetical protein; A0O31_02111                                                    N/A                 MPKEEEKVQAQEALPTIEEHAQALGVPPWAFAGLKVYAGWAEGTRVSRAQFEKALKEFLQGPTHR
complement(1910804..1911295)       hypothetical protein; A0O31_02112                                                    N/A                 MIAPVLEYLKAACAHAGLPPTRVLVGRSREEAYRMAPAALIQPLTGALKRDGSRVVAGPVKTRRRLYGGTLRIRLELYARSSEELDQLLAGVLLYMWDTPLHVGEDYHAKLNDIALSYLDEEGLLVGENALALEVPVEIALYEDTAWVPIAVEVEEAVLEEEV
complement(1911292..1911789)       PHAGE_Rhizob_RR1_B_NC_021557: virion morphogenesis protein; A0O31_02113; phage(gi514231162)     3.15e-18            MGVRLKGDWRELNEALRKLGRGVPQKVKEAIAEGILARTHRRFEESRAPDGSPWPPLSPATLAKEVRPRDRLKRGGISAAAQRRVALRKPLVVTARLKNSISWKVAGSRIYVGTNLEYARIHQFGGYAGRGRKVYIPARPFLGLTEEDREEAKALLLEWMKEATR
complement(1911789..1912226)       PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: hypothetical protein; A0O31_02114; phage(gi971741535)     1.02e-10            MITLEDLRQALPLDVLLYLVDEEGAGVLTPEGQARAEAALREAWAEVESYLAQRYALPLPSLPEVLKAKAVDIAVYRLMLRRGIRPGTADEAALTRYRDAVAFLRDVAVGKASLPLPPTGEPARPKGGAAVRGKRVFSRESLEDF
complement(1912223..1913131)       PHAGE_Pseudo_D3112_NC_005178: putative major head subunit protein; A0O31_02115; phage(gi38229147)     6.86e-54            MILNRENLSALSRTLKALVFEAKEGYTPLWPKLALEVQSNGRANYYAWMENMPTMRLWEGERQVQNLTAETFAIANADWEATFAVSRTDAEDDQMDLIRITALQYARRWAEHDDLLIADLLRKGFQQKGYDGRPFFGSHTVGKRTFQNASNAPLTREAFRQALSQMRQLTDARGYPLGFFLQKPIYLVVGPGLESTAYEIVGVPTLPSGGANPDYGKAEILVSPWLVEEYETYWFLVDGSQAIRPFVLQRRSRPEWVAKDDPETSDEVFKRNVFIYGVYERKAAGYLFWQLAYGSTGTGTGA
complement(1913132..1913515)       PHAGE_Pseudo_JBD25_NC_027992: capsid scaffolding protein; A0O31_02116; phage(gi100037)     1.05e-16            MFDTERWADEYLIPLPVKANAVIRQGALVMVSGGYAEEAAPGTGKIALGVAQETVDNTGGTDGAKKVLVRRGVFRFENDPADPVGPTELGKDVYATGPNTVGKTGTGRSKAGRALKVEPDYVWVEVW
complement(1913515..1914528)       PHAGE_Pseudo_JBD25_NC_027992: hypothetical protein; A0O31_02117; phage(gi100036)     2.28e-14            MTSLTGFPKNTDTSTPTFSGTLRAALAEAPDRIPLHPFGEFVGNGTVFLYDEESLQAALEDLRTRGVPWVLDFHHQTVRVEEGQAQEAPAAGFITGLVVGEDGFVYGLVEWSETGRERVSRGEYAYVSPVFYYDPTPDEMGRHRVLGYHSFALTNNPGIRFQKRIEAEADMLEKLRQALGLDPEATEEAALQALEDLKREAAVGRVVLEVGLGAEDPTELKAKLLRLLAAQDALEELERTRKELEAIKVQTREEKAQALVRKALEEGRILPHQREFWLAQARADLEAARKALEGMPRLVPVELPKAERKALEEDEPLRRLAQVFRVSEEALKRFGGE
complement(1914600..1914869)       hypothetical protein; A0O31_02118                                                    N/A                 MLKVIRIAYFALGLAVLVVEDLMDGVPGLQKKEEAMKRVKEVVNAILGFWPAWIPDPILGWAIDQIVALFNRDGTFRKGADAQPQGAGA
complement(1914964..1915641)       PHAGE_Entero_lambda_NC_001416: repressor; A0O31_02119; phage(gi9626292)              3.46e-09            MRNSQLAKLKKEKARLEGPFAEEILAAMKRLGMRRLEEFADAFGLGRTTVYNLVLGRKVGNKWIKPSLDTVVRLSLALNIPVEDLIAKLYEDEVPTLGQREEVHVPVVGYVGGGPSQLEEIEERTVPVRVKGDARHLAAFKVRGNSMCAGKRPICHGDVIIVNTEDKGHPGAIVVARLENGEYVVKLLKNGALYSTNPEENGPPVIPLDQVAEIVGRVVEVRSRL
1915567..1915579                   attR                                                                                 N/A                 CAGGATTTCCTCG
1915709..1915933                   PHAGE_Clostr_phiCD505_NC_028764: Transcriptional regulator, Phage-type; A0O31_02120; phage(gi971819883)     7.16e-07            MVNRDRLITLMRSRGLRPSDLARLSGLSTGHVSQILKGERTRLEVRTLVRLAKALDVPVQELLLEESDALASRR
1915911..1917842                   PROPHAGE_Deinoc_R1: transposase, putative; A0O31_02121; phage(gi15807743)            3.94e-62            MPWLPVDEAAERLGVSRASAWRLIQRHGIPTRKEKRGRTWRTLVDADLLALALGREAPPEPRPVEASSASQPALEAHLSRIAAEARDLPRGLKWDLIKEEAQRLGVTPNYLARLLRRYEAGQLLYARRPRRDRGTHRVPAELRKLVVGLKLAHPRASARRILRIVEANDPGLLLYRPYSTETLFRLSEATVRRILRKAEENPAFRYALLSEEGRREFARTWAGHVLAEYPMQMVMVDMTRCDTFVYLPEEDRMVRLRIHVALDVYSGAVPSLVFSREESQVPTDQLLILMTQDKTAIVPDWDVRGVPERIYWDNGKVYRSEKSEHWARTLGIELVYSRPHVSHTRGKVERFFGAFHQTFEALLPGYAGSDATERDSSELRRLLQNTRRWVAEGMPPERDPYPDRLLLEEEYKGRALQWLLGTWHREPLEDGLTRLDLFRAFVPRHRLADFRLEDLYLAAAYQVERVVRGNGTVQYRGRTWYLDPRHGSLLPWQGQKVVLLDVQVLPGQPLRVALKNPDGTLRVLGELLPEPLRADSLEARAKRAADRAAIRALQEEARRLVEELSPAMRLEDMLERLSGLAPLPRRERITLRAQELPAPSPEEIARGVEELAAELEDDLVLDPIALGEQWLKERGLLPRGEEE
1917853..1918647                   PHAGE_Bacill_BalMu_1_NC_030945: kilA anti-repressor protein; A0O31_02122; phage(gi100007)     6.32e-11            MGRKANGDQTLALIDEALGIVMGEAELWKDPRDGFIPTEGAKALLGHLHLVAQEGFPLALVVGPAGVGKTLTCRYWAREHEAPWVRAQPSYSPAALLEDLAVELRITRTKTFRVLLSMVRDALLMSPRVIFVDEAQLLDRPTLETVKYLADETGSSFVLITSEEFEGQIRRHRDIESRIGTVARIGPISLQETQAIYKDSGYSPEVLAEVHTLTGGILRDIVRLMRQMDRVVEWSGERGLTKAAFTPAHVRRVASRLNLAGGAR
