gi|00000000|ref|CP016340.1|  Bordetella trematum strain F581 chromosome, complete genome. 4476250, gc%: 65.55%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1096052..1096067                   attL                                                                                 N/A                 GGGCAGTTCGCCACGG
complement(1096368..1096988)       PHAGE_Ralsto_RSA1_NC_009382: phage tail protein gpI; BBB39_05240; phage(gi145708096)     2.43e-71            BordetellatrematumMAKKRALLPPSSTPLERNLAITGADIEDIPLPIRSIRQAAECPPDLLTWLAWERSVDRWDDAWPVEAKRKALRNSFFVHKRKGTIGALRRVVEPLGFLLNVTEWFQMQPEGRRGTFRLTIGVLDSGIDEAMYLELGRLIEDAKRLSQHLIGLAIAAEVRTQVNFGIASYDGDTLTVYPYIPETIETRVSLAYGLRDHTIDTMTVYP
complement(1096981..1097907)       PHAGE_Ralsto_RSA1_NC_009382: baseplate assembly protein; BBB39_05245; phage(gi145708095)     5.38e-99            BordetellatrematumMATSNTIDLSLLPPPDVVEQLDYEQILETRKARIIALFAAEDRDAVAKTLALESEPLTIQLEENSERELILRQRINEAARAVLLAFAKGADLENIAAEYGVQRLIIRAEDLTVSPPIDAVMETDDELRDRVQLAWEGLSTAGPRGAYEFHARSAHGQIADASAISPDPCDVLVSILSRDGDGTASETILAAARLALNDEDIRPMGDRVTVKSSVIRRYNVRATLHLKGQGPGRSVATATVNASIGAFVNRPRRQGVSVWRSALTAALHVEGVDHLVLHEPAADILLQPTEAGTCVEVSIEVAGGTDNG
complement(1097909..1098250)       PHAGE_Burkho_phiE202_NC_009234: gp35, phage baseplate assembly protein; BBB39_05250; phage(gi134288768)     8.00e-27            BordetellatrematumMNAKTGRRITGAEHLSQSIGKIIGTSVGTRVRRRPFGSVAPDLVDAPANAATLLQLYAAAATALLAWEPRLTLRAITAQVDAASPGALMFELSGEALIDNEVRPVSLSTRIGA
complement(1098262..1098888)       PHAGE_Ralsto_RSA1_NC_009382: baseplate assembly protein V; BBB39_05255; phage(gi145708093)     7.15e-57            BordetellatrematumMHEIAELFRLLTNLIRVGTIAQVDLSSRPAKVRVSTGALTTDWLQFLALRAGTSTTWDPPTTGEQVLVLCPGGDTAAGIVITGLNSDAIPAPSTSASEHVRLYPDGARVTYDHQAGALTATGIKTIQANASTSAILRCPAITLDGDVTVTGLLSYQAGMSGKNGKGNRTVISGDIIQRDGELSSNGVVLETHTHRVRSLGGETDEPTK
complement(1098949..1099413)       PHAGE_Burkho_KS14_NC_015273: gp23; BBB39_05260; phage(gi327198292)                   1.27e-32            BordetellatrematumMSADFADVQDWAAGLLARLEPAELRKAKLRIAQELRRTESQRIGAQVDPDGQRYRPRKARKNLRGKKGTIRRKMFARLRTAQHLRAGVTEDAATVGFKGRASRIAWVHQRGLRDRAAPGAPDVRYPVRRLLGFSKESRERVLDTLADFLAGRGL
complement(1099410..1099916)       PHAGE_Salmon_RE_2010_NC_019488: tail protein; BBB39_05265; phage(gi418489706)        2.01e-39            BordetellatrematumMRKATELRAYITEANPYLRRDPEKLHVFIDAGAVAAVATASLSHEYAYTLNLVIEDFAGDPGSIMVPILAWLRVHQPDVLENPEKRKQAIAFEVEIITNDTFDLSIKLQLTERIIARLDPAGERIDITHAQEPSHPDLFPDPSAPARSVCRDGEEIGILPYPGWAIER
complement(1100012..1100437)       PHAGE_Burkho_KS14_NC_015273: gp26; BBB39_05270; phage(gi327198295)                   1.04e-14            BordetellatrematumMNGWLWRLAPYLVCALLALVIWQQRGTIAGQAAALTAYGERLNAQDVAMSKITAGIQQGKDDLRQLVATQEGFRSALESRRSDIEDLKRENEDFRHWADGVLPEPIARMRERPAITGADGYAEHLRARSPLRAVSQPPGPQ
complement(1100434..1101243)       PHAGE_Burkho_KS14_NC_015273: gp27; BBB39_05275; phage(gi327198296)                   1.51e-90            BordetellatrematumMNEILKSGSRGLAVSALQTQLNNAGHRLDVTGEFDDATESAVRALQAARGLVVDGKVGNKTRAALAGQDTSKLMRESDLSAAAKQLGVPLASVKAVNAVESNGNGFLPDGRVSILFERHVFYQRLQAHGVDPAPHALRFPGIVNPKRGGYAGGAAEHARLATAAQVCRAAALEATSWGAFQIMGFHWQALGYESVEAFVASQQQSEGAQLAAFVKFIEADPVLHRALIGRKWAAFARGYNGTAYAENLYDVKLARAYERFSAPAGKVAA
complement(1101236..1101532)       PHAGE_Burkho_KS14_NC_015273: gp28; BBB39_05280; phage(gi327198297)                   5.24e-07            BordetellatrematumMNTAALTLTPLAVACVLLYALAGARLLWYRPNGAHHRPKVSLFASIAIASLFCRALAVALCTSGPPGLLELVAAGAVCAIAYAIRGNLAIFFRSKQRE
complement(1101529..1101918)       PHAGE_Burkho_KS14_NC_015273: gp29; BBB39_05285; phage(gi327198298)                   1.99e-11            BordetellatrematumMGLNFMAEPSTVTATAAATTATSGLVLAQVLPYIDANAAFGAVIGAALVASTKKDLSAWKRFLSFLLSALCGYGGAGEFIAREWAKQSFLPALLGALIIVPIALKLLAMAPDFDLRAIIIRMAGGGGKP
complement(1101909..1102115)       PHAGE_Burkho_KS14_NC_015273: gp30; BBB39_05290; phage(gi327198299)                   5.55e-25            BordetellatrematumMQVRAMQGDTVDALCWRHLRTTRGVVEQTFELNPGLADHGAILPHGLAVTLPEPASEPSTVPTVNLWD
complement(1102115..1102588)       PHAGE_Ralsto_RSA1_NC_009382: head completion/stabilization protein L; BBB39_05295; phage(gi145708084)     3.63e-37            BordetellatrematumMSFIATAPTPSKTPANVIKNDGFFPDFDMREARDALRLDGTVTDSRLRHALLGAIVEVGGDLAAWKEAMRARGSDTLASVPTGDLIDGQSRRTLAYVRAVYSLVKADLIERMADYDTTGAGQKRIEWLADAPDEHRRNARWSTADVQGRPRNVVELI
complement(1102681..1103376)       PHAGE_Burkho_KS14_NC_015273: gp32; BBB39_05300; phage(gi327198301)                   8.49e-40            BordetellatrematumMASPAQLHRMRVLAAKTSAASEGAPVVVGGIYGQMMAKLTLDARRLHDIQSVERKISVKRELLPEYQAYITGVLEGDSGQPDEVVATLMLWHIDAGLFERGLEIATYVMRHELPLPERLKRNAATLLLDEVAGAVAGGAVADADTAMAILQRVAVLVDGHDAPDQARAKLHFALGKTLALQAGDTLDGQRLEMARAAVAQLKRAVDLFSGIGAKKLIEQLERKIKNAGTAG
complement(1103379..1104389)       PHAGE_Burkho_phiE202_NC_009234: gp2, phage major capsid protein, P2 family; BBB39_05305; phage(gi134288740)     4.41e-146           BordetellatrematumMHQETRKKYNAYLAQLAAVNGTDDAGKTFTVIPSVQQKLETALQESSSFLGRINMVGVDELQGEKLGLNLSGPVASRTDTTAKERQPRDLSTLDNNGYHCRKTDYDSFIRYDKLDAWRRFPDFQLRIANLLVQRQALDRIMIGFNGTSIAANTDPAANPMLQDVNKGWLQKARESAAERVMAEGKTGSGKVLIGPDGDYKNLDALVYDAIQLLDPWHQENPGLVAILGRGLMHDKYFPLVNQDNKATDTLAANIIISQKRVGGLPAVQAPFFPAGKVMITSLDNLSLYWQVGGRRRHVIENPGRDRIDTFESSNDDYVVEDFGLLSLIENIELAAA
complement(1104435..1105286)       PHAGE_Burkho_KS14_NC_015273: gp34; BBB39_05310; phage(gi327198303)                   5.03e-72            BordetellatrematumMKWFTVATEGQTTDGRVIERSWLDDIAATYNRETYGARIWMEHIRGLLPDSPFKAYGDVLAVRVQDNKDGKRELQAQLDPTPDLVAMTKKRQKIYTSIEIEPNFAKSGKCGLIGVSVTDSPASLGTSILEFAAKNPAAHPYASRKQNPANLFTSALETVLDFDETPAAQVPDASASFFARMKELLSTFAQQPQQAQPALPNDTAKALQALPQLFSDFQAAYTAGNNATASKVEKLESELAEFKKSAASAADLQDLRETLDKTPNSFHQRQLATGGTGEQLTQF
1105431..1107185                   PHAGE_Burkho_KS14_NC_015273: gp35; BBB39_05315; phage(gi327198304)                   0.0                 BordetellatrematumMSEIAENIDTRKLARDLYWQGWRVSSIARHIGEKRTTVHSWKTRDKWDAASPLERVETALDARLCMLIAKDQKDGRDFKEIDLLGRQLERTARVRKFDSDGKESTLNPNLERRNAAPKIRPERNAISEAQADRISKSFRESLFDYQKVWLRNGDQRTRMILKSRQIGATWYFAREALDDAIRTGRNQIFLSASKAQAHVFKQYIVQFAREAADVDLKGDPIVLPNGAHLYFLGTNARTAQGYHGNFYFDEFFWTPNFAELNKVASGMALHKHWRKTYFSTPSSMAHEAYPLWTGELFNKRRAKREQVAIELAHAVLKNGHRCDDRLWRQIVTILDAEAGGCDLFDIDELRLEYSPDQFENLLMCGFIDDTASIFPLAMLQGCMVDAMVEWIDVQQFLLRPYGYNPVLIGYDPSLTGDSAGCVVLAAPRTPGGKFRVLERHQWRGMDFAAQAKKIKEITERYAVIYIGIDATGMGQGVYQLVKQFFPNARAYAYSPEVKSRLVLKAGDVIRNKRLEFDAGATDIAHSLMSIKKTMTASGKSVTYDAGRAADTGHADLAWALMHALDFEPLEGATSANQGLVEIYG
1107182..1108231                   PHAGE_Burkho_KS14_NC_015273: gp36; BBB39_05320; phage(gi327198305)                   2.21e-151           BordetellatrematumMKRKKAPRVQLAATAAAQAAAPASAGIEAFSFGEPEPVLDRREILDYLECWKNGRWYEPPVNFGGLAKSFHASPHHSSAIYFKANILASTLEPNRLFSRDTCHKMAVDFLIFGNAHAERQDSVTGKLLGLRHALAKYTRRGLEADQYFYVPSIGQEHEFARGAVAHLMQPDINQEIYGMPEYLAALNSAWLNESATLFRRKYYQNGSHAGFVMYVTDTIQDESYVNGIREALKNSKGPGNFRNLFVYAPGGKKDGLQIIPVSEVAARDDFFNIKNISRDDMLAAHRVPPQLMGVVPSNSGGFGAILPAAQVFARNELEPLQAKFLGLNEWLGQEVVKFRPYVVHTGEKE
complement(1108299..1108586)       hypothetical protein; BBB39_05325                                                    N/A                 BordetellatrematumMDFFDQSPRAPLSAARIRALYAQNPTTEACALAWEIWRLQRVVVALEAGLRNASTLRHRQDILDHVAKLREYVQGEPCLIEALAVKPGRRRDEER
complement(1109568..1110071)       hypothetical protein; BBB39_05330                                                    N/A                 BordetellatrematumMNLSPLQLEHYHFYQLSLVSRDDIELDLDRKSLYPPIGEDEVHTKVLLLTSDEADPHEFIVRLRVRSELTSANAEFPYTFDVDIEGMFSIDHDGEIEERKRLVVCNGASILYGSIREQILSLSARHRYGPIMLPTASFLKLTRSDNAPAEPAEPREGARKRASKKKL
complement(1110084..1110593)       PHAGE_Escher_HK639_NC_016158: hypothetical protein; BBB39_05335; phage(gi356870648)     5.38e-06            BordetellatrematumMNVSALWAEATSDDDFVFDVRAERLCVDLIRALHHQDMTQSDLASILDWTKGRVSKVLHGHTNLTLRTLHTLVTAMNLDFDIVFRSKEDAACRQPWHEREADTYKTRVAAVHAMEATMRQKLAECSMLLASAKQVNQAAWRRTDVQQAAKKTHFSPNENWGFPIACAAA
complement(1110634..1111149)       hypothetical protein; BBB39_05340                                                    N/A                 BordetellatrematumMPLYRLITNASIGNPDDDPQAAKDSWKLYSRLEDDKPDASLLLIRQIAAMQEPADRKAALAAVVKLIQVAATGKPLTDFYDKKQCHPFHQFLHPEKPPQTNHSVYRIWKGARVRLSFYYGADRSILLVNAFSKKEDKLTKAQTTALETEVKTYLDAMAEGTFRICKQEIKD
complement(1111298..1112635)       PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; BBB39_05345; phage(gi16130540)     8.34e-35            BordetellatrematumMPSDLLTDTAIRRAKPAETLHYLQDGNGLMLRIRPDGRRDWMWRYTSPTKGKRETLYPGSYPALTLKAVREFVQKRRELVAKGIDPKRATAVLNDDTDAIPTTVSELFGVWFKKEIMPHRKSETDHQSIQGRFSRYVLPAIGDVSLTDVRRPHVLKSIEPAREGKKLRTANLILSELRQMFVYAVAREWMQGDPTAGIKRRDAGGQDKEGDRVLSDGELSQLRDALARPTEQRTKYYTATRRVLPVRSELMLWWTLATAARAVEVASIKRRGDVDVEARTWDIPSDVAKNGRAHTVHLSNFTLAIWSRFLLLPAGDSPYLLVGREGGHVSERELTRRLTDRQTRTKKVKGRKNTTDLDLPGGHWTQHDLRRTAATIMGELGIPEGVVDRCLNHIEPKKVTRTYQRQQMLVQRRDAFDALGAHLTNLLGDPAEWLPWPNLAEDSAQ
1113238..1113504                   PROPHAGE_Xantho_306: ISxcd1 transposase; BBB39_05350; phage(gi21243158)              4.91e-37            BordetellatrematumMKRSKFTDTQIIEAIKRVEGGLAVQDLCREIGISQATFYKWRSKYGGMDASLMTRMKELEAENVRLRKMYIEEKLKAEIVGEALAKKW
1113525..1114322                   PROPHAGE_Xantho_306: ISxac2 transposase; BBB39_05355; phage(gi21244662)              2.21e-135           BordetellatrematumMVKRATHERGVSVLACEMFRISESCYRYEAKLKTENEDIAQWLLRLTDNHRTWGFMLCFLYLRNVRGFGWNHKRVYRIYRALELNLRIKPRKRLARQVPQPLAEPARINEVWSMDFMHDQLADGRSIRTFNVIDDFNREALGIEVDFSLPAERVARTLAQIIEQRGRPSVIRCDNGPEYVGTILTTWAQKRGIKLEYIQPGKPQQNAYIERFNRTARHEWLSQYEWEDLEHVQDHATKWMWSYNHERPNMALGGITPKQRLAMAA
1114849..1115085                   hypothetical protein; BBB39_05360                                                    N/A                 BordetellatrematumMILYLNPKRGRYLFGMEPLLVAGDLSLSGTLLAWSGIGHAATPNTLGCMASPGLDCVGDRPISTHYGHSSAACQDRQV
1115170..1115673                   RNA polymerase subunit sigma; BBB39_05365                                            N/A                 BordetellatrematumMHTLYSDNHGWLLGWLRRRVGDPFDAADLMQDTFVRVLKTHTGRCGAANADPAAEIREPRAYLATIAKSLMIDFFRRQTLERTYLEVLAALPPQEVPSLETQAVLRSALIEIDAMLDGLGLKVKQAFLMAQCEDLPYAEIARRLGISRRSVDNYLARAMAHCCLLLP
1115685..1116650                   iron dicitrate transport regulator FecR; BBB39_05370                                 N/A                 BordetellatrematumMSTETPLSARDLRAIKEAATWYARLSSEATTANDRHAWSLWLASDAAHRAAWGKVEQVCRQMGRLPGSIARPTLAPAKASRRAVLRTIGLVAGAGAASWLGWRTLPWEGWAADYRSAVGERRNIKLADGSSMLMDTNTAVDVTFDAQARILDLRSGAILVSTHPDPAAKPRPFLVRTRQGTATALGTRFMVKTEGGWTRVAVLEKSVRIEPVQGQGAVVLQAGQQARFSRDTVEPAKPNDITTASWTSGNLVALDMPLGQLAAELGRYRRGGLGCDADVAQLLVSGSFPLDNTDQALAALTQGFPVKTERVLGYWTRLVAR
1116813..1119248                   TonB-dependent receptor; BBB39_05375                                                 N/A                 BordetellatrematumMRLRALPSHLALLFMASALLASPMLHAQGAVMASESTVRRFDIPGGPLAQVISQYASAAGVAISFDAAQTRGLTSAGVHGAYGGDAGFAVALAGSGLQAVRGAQGAYTLQALPAAGSVVTLPSIAVTASSERPADDGFVALRSSAGTKTNTPLIEIPQAISVVSREEMDQRGVQNFNSAVAYTPGIRAIDYPGGQGAPDIYLRGFRAFNLFSTFRDGLRAGFNQYDIDIETYGLERIDVIKGPSSVLYGQIAPGGLVDMTTKRPTETPLHEIELQGGNFDRRQAAFDFAGPMDQEGKWLYRITGVARDSGTQVDHSPDDRFYLAPSLTWRPTDRTNVTVYASYQKSKRGGSEQSLPLTGTVIDNPAGRFPSDVFLGQPDLTHYTVENTSVGYEVEHAATENWTVRQKARYTHADVDYVSSGARNSAQLTDGRYYTFGMQDRPKSTDTFLVDTNVEGRVSTGAVQHTVLAGLDYGYYSGRESRTGGTNGTVDIFNPVYTNTTTWNSFKSVDGKSQVYQTGLYAQDQLRYERWILTLGGRYDWATNKESDYLSDASSKVNSEAFTGRSGLTYLFDNGVAPYVSYSTSFQPASGTLAPARGGGNFDPTKGKQYEVGIKYQPPGSDSMITASLFQLTQQNVTTADPLYSGYSVQDGEVRSRGLELEAKTSLAAGLNVAASYTYLDAEITKDNANLVTGVSKKGLRPASVPRHMAGLFVDYTVRTGPLAGLGLGSGVRYVGSSYNAANTIKIGGYTLVDAVVRYDLGQLSQDLKGLRASISATNLFDKRYFTPGFYDQSVFYGNRRAVVGTLSYSW
complement(1119357..1119983)       PHAGE_Bacill_phIS3501_NC_019502: site-specific phage integrase; BBB39_05380; phage(gi422934319)     2.40e-14            BordetellatrematumMESTNVTVGHRVPWNKGKLTGQKPPLKLGEIWAIRTRLQIASNVRELAMFNLAIDSKLRACDLTRLQVQDIRHGSHVAARATVMQQKTLRPVQFEITGQTRESVEAWIEARGLKAADFLFPSRLHTSPHLSTRQYARIVHRWIASIGLDDTAYGTHTMRRTKASLIYRRTKNLRAVQLLLGHTKLESTVRYLGIEVDDALEMAEQTEV
1130606..1130621                   attR                                                                                 N/A                 GGGCAGTTCGCCACGG

#### region 2 ####
1983762..1983773                   attL                                                                                 N/A                 GTCATTTTCTGG
1996555..1996791                   PHAGE_Brevib_Jenst_NC_028805: putative DNA-binding protein; BBB39_09095; phage(gi971744909)     4.25e-07            BordetellatrematumMEHTEILPPVLARLREVKHSDLSELSRLSGVPESTLRKLRYGEVKDPRVHTVQALANYFAKAPALGDPEAAQQEVGHG
complement(1996817..1997284)       hypothetical protein; BBB39_09100                                                    N/A                 BordetellatrematumMEIDAQIWVTLGLAFLAGALKLAKDRPRLLEEWVDKITGAMFVVQMLLIGASLMLAWVRWVVAARLDGVMTEEHVQALLWVAVDMGDAARLVVKVILATIAISAFAWLLLWFGRAWNKSAMPTPPGEGSQKPGSNPDVRKERQDASVDASKGEPK
1997647..1998162                   PHAGE_Stenot_S1_NC_011589: hypothetical protein; BBB39_09105; phage(gi213163945)     6.93e-33            BordetellatrematumMTCYYTVTQWRDALYNAIRACDGGVDSAARFLSDRRDVSMHPESLRRKLRGRDHLDVDVAVLLAEFVSRDAGAANRSNEWLLSLCAQEGLHVDDVPPEPVGGHDNEARALQAKFMEMSAEIGKIASVTVQTTSDERIDQGEADTLIPLLRAARVLLHRMERNARRGALREQ
1998162..1998617                   PHAGE_Pseudo_YMC11/02/R656_NC_028657: putative NinB; BBB39_09110; phage(gi966197899)     1.17e-11            BordetellatrematumMRQRLLNPKSFLLRGESQQAAAQAYLANLPLDADEPLELVVRERVKPRKMSQNALMWAGPLADIAEQAWVNGKRFSAEAWHEHFKREFLPEEFDPELCQEGYVKWQITPRGDRALVGSTTQLTVKGMAQYLTQVEASGAELGVEFRARGAR
1998710..1999069                   PHAGE_Burkho_phi1026b_NC_005284: gp74; BBB39_09115; phage(gi38707964)                1.12e-28            BordetellatrematumISEPVATLTRQATLQRAAIKRRAPKKRAGHAPQYTAACKGESCYLGFPGCRSYPEDPTVVPAHQNEGKGMGLKVHDRFTVPACHFCHALYDQSGIAREIKRSTWDWAYTRWEPVRAKKLG
1999191..2000006                   PHAGE_Salmon_SPN1S_NC_016761: putative DNA replication protein; BBB39_09120; phage(gi374531237)     1.33e-14            BordetellatrematumMASDWIKMRTDLYRDPRVCVMADLLMNEDGELARYVNQHCQRHLTVTRNVMRNVTVGALVSVWGVMRLRGKAEGTDLVCRAVTTSVLDDIAELPGMGAAMEAVGWVVSTDEGLVFPRFFEDHNVDPDASSKSKSAARQQRYRERQKQESDVTRDVTRDAKVTPREEKRREYKDNPPNPPAGGEGWSLPDWIPAEPWRQFEEMRRKKKKPMTDAARKLAVTKLDGLRADGHDVAVTIEQSILHAWDTFYAPKSAGSASQGALGGASPWEGAV
2000003..2000374                   hypothetical protein; BBB39_09125                                                    N/A                 BordetellatrematumMIGHQSLIGARMAGFRPTDVWLTCVPEGMTYGRFTHPEAQIGQVSDGRFVGQPDIHIHDGENASALDLRPVVGLVVHVVAPSKARALQLMRRAAAFSPAKIIAAGEWGTMLWTPGGGFLELNP
2000371..2001312                   PHAGE_Entero_c_1_NC_019706: hypothetical protein; BBB39_09130; phage(gi428781787)     3.90e-56            BordetellatrematumMSQIIQSGDIDFQAYMAESEPQAKVLAAECWRDELARTIEQGDQITGAKLPWPKTHDLLRFRPGEVTLWQGINGHGKSELLGQACIGFATQGERVCIASFEMKPQSTLKRMLRQTAMNAHPSVQAVDRLIDWSRDRLWLYDQQGTVTPAMLYAVIRYCADRLKIRHMVIDSLMKCVRGEDDYNGQKDFVDMLCTLARDLKMHIHLVHHAKKGENEDQVPGKFAAKGSGAIVDQVDQMLTVWRNKKKERIAEAELRKDGELSADTMDTPDSLLICDKNRHGEWEGRIQLWRHAESLQFVGDKRRLPIDMIGSLA
2001309..2001962                   PHAGE_Mycoba_Phipps_NC_028942: gp6; BBB39_09135; phage(gi971758400)                  4.76e-06            BordetellatrematumMTQHDLMTAQADIALDPMAGTLARAHVSPDADPWARGGHEMAPNASPRRANAGSTAATSPGLNVNILALDLGTKTGYALRRRDGTLRYGTEVFTPRASWTPGQKWQRYRAWLSKTIAEEAVDLIVFEDVKAHGKGAVLAAHAYGGFRAMLEMVADGHRVRLLPVGVGTIKKHWTGKGNANKDAMLAQAKARGFRPETDNDADALAILHWAVEQESKA
2002407..2002850                   hypothetical protein; BBB39_09140                                                    N/A                 BordetellatrematumMKTPKLLLDRLPADFHARLENWGDVMRDRSRPAVSPTYQICRDLARRAGQTRNMENEPVREWNEPDAEFIEGCWRLAAGYRGLPRETAMLRAYYVLLQPPHIICRFQGVRAREFDDVIVRAVVEFEHFVARIQNRRHNPPQSVQTTV
2003435..2003884                   PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575: Putative terminase small subunit; BBB39_09145; phage(gi589286873)     7.41e-45            BordetellatrematumMARPSKYQPGFAEQAAKLCRLGATDKDLADFFHVTERTLNTWKKQYPEFLQALNGGKAMADAEVADRLYQRALGYTHAEDDIRVCDGVIVTTPTTRHYPPDTTACIFWLKNRRPDLWRDKPDPTNDDNAPPPVKVVIEVKDASVPDAEP
2003871..2005148                   PHAGE_Acinet_vB_AbaS_TRS1_NC_031098: hypothetical protein; BBB39_09150; phage(gi100002)     0.0                 BordetellatrematumMPSLNQPQARFLALPHKFRAFVAGFGSGKTWVGGAGLCRHAWEFPRVNSGYFAPTYGQIRDIFYPTIEEVAHDWGLAAKINESNKEVHLFAGRKYRGTVICRSMEKPGDIVGFKIGKGLIDELDVMKADKAALAWRKIIARLRHTAPGLLNGVDVTTTPEGFKFVYQQFVKQVRERPELAALYGLVQASTYENGKNLPDDYIPSLRASYPPQLIAAYLRGQFTNLTSGSVYANFDRRLHHTDATEEPHEELHIGMDFNVLNMTATVNVIRAGLPLTVGELTKVRDTPEMARMLKERFKDKGHGVTIYPDASGGNTSSKNASESDLSILRKAGFTVRVNSRNPAVKDRINAVNGMLLNDEGARRWLVNTDRCPTLTEALEQQAYDKSGEPDKSTGHDHPNDAQGYFLVHRYPITPNGMSRIKLKGT
2005151..2006569                   PHAGE_Vibrio_vB_VpaS_MAR10_NC_019713: portal protein; BBB39_09155; phage(gi428782116)     2.79e-72            BordetellatrematumMPVDTRHPLYMAAAPRWERCRTALQGQDAVHAAGTKYLPKLAGQDQEEYDAYKGRALFYGATARTEEAMIGMVFRKEPTVTLPSALQPMIADADLAGTPVDTFIEKVTQEVVDVTRVGVLVDYPVASGGFMTVGQAQAAGMRPYLATYKAEAIINWRTARIRGVSQLVLVVLSETYTEQKDEFAAEEKTQYRVLDLADGGYRVRIFRGSLTVPEIEYTPLMRGQRLPYIPFVLIGRNGESIDPQKPVLLDLVDVNMSHYRGSADYEHALHFTALPTAVVTGHQMQAGETLKIGSAEAWVFGEPDSKAKYLEFSGQGLSSIKESLERKEGMMATLGARILAPEKRDAEAAETAKIHRAGENSVLGGITLGVSRSLAKAFMWAAEWAGAPAGEVDVQLNTEFFPVGLSAQDLTALVNALQTGAISPETFFDNMRRGGVVQDGVTFEEERDRIEAAGPPRGLMGGGDGDNADGAV
2006541..2007650                   PHAGE_Pseudo_PS_1_NC_029066: head morphogenesis protein; BBB39_09160; phage(gi985757697)     5.55e-123           BordetellatrematumMATTQTELYDATVRHAIDLVRYSNGSVRRIIALLNRVDADLGVQLARAMERLPASAFTVARLEDLLKDIRKLNAEAYSQVRSTLESELRDLAAYEVGYQGQLFDSLGIEFTARGVTGGQVYAAAMAQPFQGQLLREWIAGLEAGRARRIRDAVRIAYVEGQTLQQVVQRLRGTRARGYTDGLLEIDRRHAEAVVRTAISHMAGFARDRWYEANDDIIGALAWVSTLDSRTSQACRLRDGLRYTASHQPIGHRVPWGAGPGKIHWCCRSSSVPILKGMEDEPLFGSRAAKDYKDSARGKGKQVQATTTYADWLRGQPAAIQDDILGPTRGALYRRGGLKLESFYNDRGVYLTLSQLRAKDAAAFARAGVE
2007655..2007897                   PHAGE_Pseudo_PS_1_NC_029066: hypothetical protein; BBB39_09165; phage(gi985757698)     1.98e-21            BordetellatrematumMTLHLVPDAPKPAETEKDRILKRVKALPKPKEMIQCYRCGGREVIETRIGVFESGRSWSGGTKVLLCALCFMNKERVVLK
2008021..2008620                   hypothetical protein; BBB39_09170                                                    N/A                 BordetellatrematumMPLDRNDPEVKALIDEAVAASSEALSAKNKELLAELRTVKAKVKGEVDPEEHARLQTQVEELTGQLDKVTKESARQIEKLTKDLADKDGALTQHLIDGGLSTALAKAGVAPHFMDAAKAMLRGQAAIKDGAAVIGDKPLADHVTEWAGTDQGKHFVTAPANSGGGGQGGSGGGKTTGNLGGTRDERVAALKAQFPELAG
2008647..2009615                   PHAGE_Pseudo_PS_1_NC_029066: major capsid; BBB39_09175; phage(gi985757701)           3.85e-148           BordetellatrematumMSLSQMQVFNKYIMPAIIETLGQQIQKFNAASGGAIMLSTGGWEGDFLQESFYAAIHSARRRVDRYAANGNATPTDLTQLKHSSVKVAGGFGPIRFEPGQMTWLNKPTAEGIEVASRNFAEALLQDQLNTAIAALVAAISNQAAATNDASATAGLSYSALNDAHAKFGDSSSLIVANVMSGQVYHKLIGQNLANAQQLFQYGAVTVVDILGKTVVVTDAPALYATGTPNLQKVLGLVSGAATVTDAGDVITNIDTTNGKERIETTMQVDYTFGLGLKGYTWDEVNGGKSPTDAELATGTNWDKVATDIKHTAGVIAIGDASK
2009625..2009849                   hypothetical protein; BBB39_09180                                                    N/A                 BordetellatrematumMTQKAKLPIWYLAGPFYRYEQDVKAEAAKAGVRIVDANATESRDGAAKDVPKVTLKPEYRQKGKAEAAKADAQT
2009911..2010393                   PHAGE_Pseudo_vB_PaeS_SCH_Ab26_NC_024381: virion protein; BBB39_09185; phage(gi658311471)     3.04e-15            BordetellatrematumMMLIVEDGTGKPDAESYASVAQCQAYAAGHGLDFSGDDSVLEAALRNAALYLDGEYTFKGSRLTGAQALEWPRTAAQGVPREVVNACCELAVRAKLRPLWRDVSSTTIGAAVEKTVGPITTKYASATGARADGQTEYAGVTAMLRRWLSSYGSSVKLVRS
2010395..2010643                   hypothetical protein; BBB39_09190                                                    N/A                 BordetellatrematumMRFCVYKGHPGFRAYNVVRRRGLRVLVTLDGAPVTHCVMADTRRGVVVCDEVDDHGKVVVNARGDGIKQVRRFGRVAVEITR
2010643..2011035                   PHAGE_Cyanop_KBS_S_2A_NC_020854: hypothetical protein; BBB39_09195; phage(gi472341510)     2.74e-11            BordetellatrematumMSTFDYAEMAATAQELLEEFGGPVTLRQIETGEYDPALGQAPSTETDSVGVGVLFDYTAQAAGIANLSGSVIETGDKQLYLAPEQAAGGPMPAARPADLVLALGATWRVVSVKALAPTGAVLLYEIQLRR
2011037..2011435                   PHAGE_Salmon_SETP13_NC_022752: putative tail protein; BBB39_09200; phage(gi557307690)     6.26e-25            BordetellatrematumMSFSADITRFIQRANGDIDRATREATVLLAQGVVLKSPVDTGRFRQNWQFSAAGIDRTTSPGVDPQGQMTLRRLIAEIGKTGSGGVTFLSNSLPYAVRLENGWSDQAPHGMVKLTAQEFQQYVSQAAKGSKK
2011432..2011854                   PHAGE_Pseudo_PS_1_NC_029066: hypothetical protein; BBB39_09205; phage(gi985757706)     1.12e-34            BordetellatrematumMSQDLIRDAFEGRLNTWAKARTPALSVAWQNTKFTRPANAVYLRAYLLPAATISRDAAGDHRQYRGLFQVNVVLPIGSGSRSAEQIGAELDALFPVNLSMASGPLIVRVRTPVSEGQPSTGDTDHTVPISLGYDVQYYPT
2011894..2012553                   PHAGE_Pseudo_PS_1_NC_029066: tail protein; BBB39_09210; phage(gi985757707)           6.66e-47            BordetellatrematumMSAQFPNGTVFSVSTALGAALAMTALTNANPAVASVAAPPAAGAILLVKSGWTELNERIVRAADPTADSVALEGINSVSTVRYPVGQGIGQLVPVDAWVDLSQVTNIEKTGGEQQFFQWRYVEDRSSRQRQRPTFKNAKLLTLTLDYDPALAWYEALVEADAMKDPVALRARLPNGSELYYYVYPSFDGDPSMTLDQNMQNTATFSMTSEFTRYDPLTP
2012566..2012895                   PHAGE_Pseudo_PS_1_NC_029066: hypothetical protein; BBB39_09215; phage(gi985757708)     6.86e-13            BordetellatrematumMSKVTFNLQASPTFTVPVEIPRHGEDPATIKVTFKHKTREGLDDFLRRASRSTADQDFDLCSEILDSWEGPDMPFGKEAFDLLVDNYQGAMRALVSTYTAELLQARRKN
2012958..2013212                   PHAGE_Pseudo_PS_1_NC_029066: hypothetical protein; BBB39_09220; phage(gi985757709)     1.84e-22            BordetellatrematumMRPEDFPAAIVDLWPENVLPNDVFLAMGSQWRVGMSGATGLDYGALPAVMKLMRVPKGERIDVFDCLRVMEAAALRVMHARRPK
2013230..2015746                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; BBB39_09225; phage(gi169257310)     2.80e-62            BordetellatrematumMADEIASLVLRVDSTQAKTANDELEKLGRSGAGAERAVKGIGDASVKAGGGVGNLAKEAQAAASGLAGTGGVASAAKMALNAISGISGPLGLASAGVVALAVGFVRGTQELDKFNQAIFLSGNAAGVTAGQLGQMAREIGKVAGSTGTAAAALTKLVSSGQFAGDMIEGLGRSAVKLQEATGKSIDDTIREYQRLADEPTRALEELNKKYNFLTVAVYEQVKALEEQGRTQEAARLALDTFATANETVSGEVVESASRMQRAWDAVTGAIKRAIDATWNAGRSAGPEERLEQARRNRESIGSSRFRTWLDNDRLRELDDEISSLEQEIKLGKEAARLEAERASAVAKAIQAEKDRAAYLKARSGTSLSAALKAEEAAFKRAVAGLKEDTQQYRDVLQVHNDKVAQLKKQFAGPAGGGGSVAAGVRELEQARQQEAVLRAQLESAVKITSSREALVKFEQRIADLRAKDSLTSTEKSVLANQNAIRQQLALNAGLEDQVRAQKEATQLKILEASAQETLLTDQQRYSDLIEAFSSSPRMREQIEAQQRLYRDFQRDAKRAAALEKDRDITPEEYQRRIQLLRQNLDDRLAEQGNYYAKVTELEADWRKGAEGGLNDYAELSANVASGTRDAFNSAFRGMEDALTQFVTTGKLSFGSLVQSILSDIARLSIRQGITGPLAGLLGSAITGMLGGVQGVGTASAIQQGGGDGIGALISLNGWGGPRAAGGPTAPGMFYEVNERGPELYTTGGRTFLMSGSEGGFVTPLTSGDGGGAMPKITINNNGTPQDYAIESLTREEVILIADDRVAKSGPRMVAGELSRSNSRTSRAMQEGFKVERKR
2015743..2016237                   PHAGE_Acinet_Bphi_B1251_NC_019541: hypothetical protein; BBB39_09230; phage(gi423262026)     2.27e-18            BordetellatrematumMTLRLPFNPIEAGYSIQPGDETLRIALDGGSGRYQRGVADAADTVEASWALFEGEYDAFMGFVRIWRRRGGPFFLVSLPLDGSLAEDYMASFIPKTVRLASKSGPVFIVSATLEVLRLEKFEDPSLDPYEFAYELLPYYGSFDGIADMTNRLEILVNKDWPDAE
2016227..2016742                   PHAGE_Acinet_Bphi_B1251_NC_019541: hypothetical protein; BBB39_09235; phage(gi423262027)     6.13e-21            BordetellatrematumMPNSRDPYVDFFLAADRAVAEIQTLEIRQVSFSRVWRLQFHYRNGLTAALETGAIAEFQYVPMSIQPLEDRGTLDFGLGVTLGDLGDILPDEIERARAAETLRTHPPQVIYRVYRSDDLSRPMLGPVDLEAREIGRTRDGAKFNATAPELNVTKTGERYTTDRFPMLLGVL
2016739..2017080                   PHAGE_Acinet_vB_AbaS_TRS1_NC_031098: hypothetical protein; BBB39_09240; phage(gi100028)     8.47e-14            BordetellatrematumMIDHLFERQYDRQAYNCLHLAGEAWELLTGDSALLAVTESDFQAGRMARVFRTYRRQAGATVAPSIVLMDTLAGEAHIGVCWRRRLLHINESGVQFLPIEALTVMYRNMRFWA
2017077..2019968                   PHAGE_Entero_phiEap_2_NC_028695: tail fiber protein; BBB39_09245; phage(gi966203884)     1.18e-85            BordetellatrematumMTKVILFRKPDNQREDHEVGDVLAFLRAQFGARFPAGGRITDMATGQDVTPKAEADIARLRGLAGPLVVEVPPMGPEFLPALAMILVSSAASMILGSIFAKTPPTATARNIQQESPNNGLSERTNRARVNGRIPDIYGQVRATPDLLAEPYKIFVDHSEKEVAYMCVGRGAYEIHDVRDDTTRIDEIASASVEVYGPNTSPNSGDAPQLRIGSPIGLPVILAKRSNSVNGQVLMPQDAGRVTMRGMVFRWPNEIRSQDPDIDFSAYFVPGDVVSIRNAAQYAGTFSYRVPDDGLAKFRPENERRPTYGDIELVGDLRGSFEAGQVVTLSDATLEWYVSGDDISDYLTTSSVAGIYSILSVSFDALQNRTTIRLDVEHNSTAWKGILSSVSGYATGSPLMTRPSDELLFDLSGSYTVSTVTSNVLSLADPVASNPDWEVVRDDFGGQSAVLFPVITTTGERWVGWMTVESTRPITRLLANMVSLNGMYRDNGRQQYSTSVSFSVEIQPVDREGEPVGDLQVVGGQVVGSATTRSTRATTLDVAVDTPSRWLKIRAKRVTPSDTSFSGQVIDEVKWRDLYACTEVEERHFGDVTTVQAVTFATDGALAVKERKLNMLVTRKLPVRLSDGSFSADLRPTTNVADILAAVCLDPKIGNRPPTQVDFDNFYQTAQEIRDYFGVDVARFDYTIDKEGLSFEEIVSMIADAVFCNAYRRGSVIRLFFEREEEDSVLLFNHRNKLPGSEQRTDSFAPEYDGIEYQWIDPETDALTTLHLPEDRSAVSAQVIESVGVRNMEQAHFHAWRAYNKLLYQNEGTTFDALPEANLLILSQRFLNADNSRGNAWDGDVIEVSEADPRVIRLSQPFDWGAGPYTIFLQGSDGMVESMPVSDGGGRYWARLAREPRTAIIVRGEAYNTTTYIITDAENSRRAKPFILTEKDAPNKDGTIPLSAINYDRRYYKNDQDFRA
2020026..2021675                   PHAGE_Pseudo_PS_1_NC_029066: hypothetical protein; BBB39_09250; phage(gi985757721)     1.57e-12            BordetellatrematumMAANTPITLQQLANAQRDAKDLERYVNDDEPGFVPTRIGGAKPNYAQILAWMTRKFENFILSSGYQDIGDYGPGLQITERNQVFWKGGELYRAGASLPLPYVTTGDWASESASFVAVGDAALRQQLASDTGAELVFFRRPEAGSVARTLQDKMRESVSVVDYGADPSGQTDSTTAIDAALQETDSPYFPDGTYLYGGDIDALFARNPQGPGSVRFDGLDYKILRHAATNVLWPGDFNVWAMGHALGTNNVQRMQIPCGVTHARMGFSKNTTVYHVEGTRVADAMRIQRNATTADESDHVVVINLSREETKPLQGRRCIFEINGCRSSAYTGSGVVYRIQMSREPEQPILRDDGAYTSGNEVLAVGSIELPLVTRPRSAPFFITVDVPEDSIQVSVALAIGFSGEAPADDYVEFEWIRMYPGEAPERLDELTVSQQFDKASTRYQTSYPYGAPRGSVTRQGAVSAVAVTAAVNWAISIPIKFSPPMVVPPQFLFQQPLSGTESRLLDVDSNTVINGLGYDLSERGAVITNNAAAVVGHRYLCHWTASVIF
2021684..2022796                   hypothetical protein; BBB39_09255                                                    N/A                 BordetellatrematumMPVVIGIKREFEYTGNDLRGRPCLFPREVRNHVMAQALNFRTKLIDSRADRYLAFPQAQLLKGSIVGIYSDGVGHADSDRQVMFRSDDYGESFRTTPFAVKNPQGGGYLYDFSLIEDLVSAGESVALKVFTITNDGGTLRPTVVSQIQAEGLTYSTWGRVTRGSDGKYYRTAYASLSPAQQQPAVFESSDMITWIFKSVIMSLPGRLLNECAIVETSPGSWLALCREDSGANNPIYWARSTSNMGISGWSAAQAYPTNLVQGRQPDLIKLSDGSLLLATGDRSGTSGYGGSAGDQVTSFSTTGITVFRTTDMSGATWGYRTRIAPIYSTDGGQPSPVEISPGRVFMPFYARRSTKALPAIGSATFDTAPL
2022835..2023047                   hypothetical protein; BBB39_09260                                                    N/A                 BordetellatrematumMNNDGLNLAVSTGTGLAAWLATFSAVVPVLWGIYVLILIAIKLPELHEKNPMFRRACAWVMSVLRGGRRG
2023040..2023492                   PHAGE_Pseudo_phi3_NC_030940: hypothetical protein; BBB39_09265; phage(gi100023)      5.08e-48            BordetellatrematumMDKGKIAAGVVSAAIALVAAWEGRSLIAYADPVGIPTICEGYTHGVKLGDVATPARCDELTRQEVVKALAVVEGSTPQALPDGVRVALASFVYNVGPGAYAGSTLVRKLRAGDLAGACRELPRWVYAGGTKLRGLERRRAAEMQICLSGL
2023658..2023933                   hypothetical protein; BBB39_09270                                                    N/A                 BordetellatrematumMLNAGGPCWRGKLSKRNWSSQIGIVPLLLLALTGCAANLPSGTPRLPAPAADLMQPAPTGSAYLESVSAELKALDDDLARWEKTLQAGPTK
complement(2024083..2024364)       hypothetical protein; BBB39_09275                                                    N/A                 BordetellatrematumMAKIKPHYGRIDAQITRIFGNTLHELTHGGSEQIFNQSDGITITDAHDLSNVYLALKTVSLIWYFCIAELLDSSIPKDLLIELQAARTRDFDI
2024702..2024713                   attR                                                                                 N/A                 GTCATTTTCTGG
complement(2024922..2026154)       PHAGE_Burkho_BcepC6B_NC_005887: putative integrase protein; BBB39_09280; phage(gi48697215)     4.14e-156           BordetellatrematumMKVAKRGKNLLDDIQLRRWVSAGEKLARSDGEGLTFTLSAAGTATWVLRYRQGGPQKEVTIGNYPDISLAAARKAARDFRAAIDRGADPALEKQRSKARATKVSNVRTLVEDFRSKKLAGLAADTITYRNWDLDKVILPKLGVIPVDQVQPSDIVHMLTSANRTWTISKRILTTAKQLFAHACGMRLINVNPAAGIDLVSLMGPRPPIKRRVMLSEQDLRSLLANIDEIGTENALAFRILLATCVRSVELAKARWENVDLAKGIWVVPEENVKVRRAFTVPLTPTVIGWFQKLQELAGTSEWVLPARQERRRRNRGGDTHIGKTTLWAAITRAFDRGDLDVRRFTPHDTRSTAKGHMRNLGVSNEVSELALNHKLKGMEAIYDVRDDIPERRAALELWAAFLESCANGAD

#### region 3 ####
2815765..2816394                   PHAGE_Burkho_KS9_NC_013055: hypothetical protein gp28; BBB39_12915; phage(gi255033760)     7.07e-06            BordetellatrematumMCSHYQTLKDAEQLLRKFGVTKPGVLGKYDMWPRYQGVFVRRPPEHDAGDEAEGDIEAVTGRWGLISGSTRRTRWPVLRSCQPSMRATTASPMPSPSATLGAARSTASSLPMRSSNLIGAQARPSLLASPGQTVRRWAWPVRAPPPGGQWHESYTMLTINADADPLFRAYHQAGMEKRMVTILPEGAYGDWLHTSAERGRDFLLPIPSDR
2816874..2817368                   PHAGE_Pseudo_phi2_NC_030931: hypothetical protein; BBB39_12920; phage(gi100018)      1.49e-10            BordetellatrematumMSQDIRYHKEFVLSTIVSQFPESRVVVESVGSGPIAQNFTKPAGTLKRSSRDGRLPRRVERSIREDHDPEFKDRLIRARQIWAEEAYPDAPQSLAKMRLQKGLSQTQLADLIGTSQSHIAKIEAGQVRIYLDTANRLAVALSVSLDKLNALLDSTSAESSSKVA
2817368..2817829                   PHAGE_Pseudo_phi2_NC_030931: hypothetical protein; BBB39_12925; phage(gi100017)      1.07e-11            BordetellatrematumMRYAHCLFCDDVRTEMGDKLSVMGIYGGELVATRPEALLPVGEGAPAALLPRLCIVGYAFTPIDRPFERLSFTVLRNDEVIQQQDLDPSELARMADRLKGIGSPEDPVTMFQVVVNLSLSPYIISDAHTLSLRFNTESEELIAGKLRVRFNKP
2818013..2818234                   hypothetical protein; BBB39_12930                                                    N/A                 BordetellatrematumMYSITREDMRRQVRVMTMDSLAKFGATEKSPIPDLLDPELLTFCSDRGMMVCGFEEIDGRRYYQGWWMQWVEG
complement(2818377..2818643)       hypothetical protein; BBB39_12935                                                    N/A                 BordetellatrematumMLALIERFKGYLVAIGAALALTLGAYLRGRSAGKGAERVRRAEQINEQASQAHKEVRDVQLETARMGDDAVADELERDWVRGTGAGRR
complement(2818627..2819169)       PHAGE_Pseudo_PEV2_NC_031063: hypothetical protein; BBB39_12940; phage(gi100051)      6.10e-41            BordetellatrematumMTLDQIIKWAINPALALLPPGMDTPAARVMLLSIGLQESRFEHRRQLVGRPPRPVGPAKSFWQGEEGGGMVRGVRLHAATRSLAAELYRARGVAPSDAAIWEAIEFDDVLAAGLARLLLWSDPQRLPAVGDEDGSWALYLRTWRPGAYTRGTPGERNALRAKWASNYGAAMREVIHAGTD
complement(2819172..2819615)       PHAGE_Pseudo_MP29_NC_011613: hypothetical protein; BBB39_12945; phage(gi215479996)     1.65e-15            BordetellatrematumMEPSTTGVGGWAAIKLALAFGLPAALAAALGLLIMPPRTAREFVTRIVCTVVSSFAFGPLLAIGMLSWRPSLAEQAHWLAQRAGTGEDSLLAMLYMLGPCMLLAGLPAWWVLGAYMRCMASMREKGLLAWLGEVRGRLLGWRRGGEG
2820037..2820591                   hypothetical protein; BBB39_12950                                                    N/A                 BordetellatrematumMLEVFKENAAGRDIRLIFGDIFEMRPPDEKFDAVTCRNVFSHYPDFGAFLKRISDYVADGGHIIFDSFSSEAIDTAAALLSLPADEVRAKVFGTLAHFSRIELEEFCAKNGMQVIDRYASAFFHRNPLFATFIEPIAEYDAQLVENINNPDVKKFMSWFQASIAAKLPSTLSGSVINIIRKSPT
complement(2820903..2823782)       PHAGE_Pseudo_phi297_NC_016762: hypothetical protein; BBB39_12955; phage(gi374531305)     3.37e-16            BordetellatrematumMGDRMAKYNTGNPMGSKSPKDLSDNAQNLDDAVNDLGKDTWLDRFGKTRVTLSGYGRMFSLFIAQSVARFQQFMTNAASRFEQFLISSGYQDLGDYRPGLKITERNQIFWKDGELYRAGARLGLPYTTTGDWADESSDFVSIGDAALRQELGTAGPGVAGAAIVAFESDVAGAVPRTVEEKLFEVPTSADDIGAAGDGVSDDTVFFAALEAGTSGQPINLLGRTFAVSALPNGNDYFNGAFVVAGQYMPQHNLPQAHPWANPAPHFKAISAGYDAVRGLNAAFLPLPSTAPIAYRSQALLIWREGRYHTFETTSSIKMARTYDAGSTLFDEKVIFKDAAGLDARNMNFAFMGGTRIGVFAGRYSASAPTSQYAPVFLYSDDFGANWSSVVLTLPSGALGGSPCSPSADGGVIHRYPASVGGHDTDGWITYVYGQTGNNTATGYFVTLDNGLTWTFGAIFSHMGPERLTETSVCRVGAENKWLMVIRDNRVATAPAYLVSKSTNMVDWEPWVASASAAGRNPPALIYDRGSFYLFAPSRQAREILMDRGSQLLYMKVNARAAFEDPVGIWNTPWRDLGAMTYWPTGPLFMHRDERGRWFGLFQTGETGQAGADQDSLQMVLISNSPTVTADAKEVVRLIPKRNIFVNGDFQIWNEGTTRESAAGRVFGPERWSLGRTSSPSTGASISRVDGVKRQFATRLQRIAGDTNSAGAVNFGYTFELGETSEIAGKAITVGFDIRRSPNMDSHIFLRFSYSTSSSEQAVTALNGTFTVGNVTASDLAVPVDPFTRHAVFRYDIPLDAKQVRFSVLMTGGAAVAGADHWVDIEGFYGVLGQVDSQPLPRSIAEDSILCARHCNKTYGPADIPGAVTDAGALQERSRGAESSAAVNMVWRFPIPMRATPTVTVFSTTGASGNLRNVTGGGDVPAIADAVGQSGATIINNAAVTSGAICRAHALATARL
complement(2823827..2826529)       PHAGE_Pseudo_phi297_NC_016762: hypothetical protein; BBB39_12960; phage(gi374531304)     0.0                 BordetellatrematumMTIKVYPSLLPGLPIEEHAAEGVTLGEWLSSKGIDYLAHEIQPVEVWRNGQRLAAEDWSSVVIRQADDVQIRLIPNGGVFKALGSIIGKVFNLAFGWLMPKSRSQSHRSPEQGSRLENSQATANSAKLGEVVPELAGRFRRFPDYLTPPRRRFVGRREQWLEFLCCVGPGRYQIDPADVKIGNTSFSALGDDAQYEILEPGELVAGRPGHEHWYTADEVGGTSSGTAGLELSAEFSSEVNPDATSYDVDGALLTMHGATVPAGWGAGTMMAIAVYMNYEVSRDVFSTFPETTYINRFTGNFRELSPGYGMTVDVGYGGEIITAKIRDYSVDQDGVGWVTLVLDDGVPFNALEPGTHSMRFFIRNRRYRAIAFPAENQVEVVANEGDIDVVGWRGFAPYQGGVSVSVDSATIYGDWSGTFLACPPGELTDAMEADFFFPGGLGYVADNGRLRDWSVRVEIQYRDARAGGAFSSQLLIYSDATLDQIGFTERIDFGGMIRPEVRVRRRGAQDTSTQVNDKIQWYGLRTRLSTRDEYPDWTTMSVRIRSGGRLGAQSENQVNVVATRVLPRLQSDGAWSPPQPTRDISAFVRHIAASIGYTDANLDMDELRRLHAVWAARGEAFDHVYDATTVKDALNLTLGAGMSEFTVHDGLILPVRDGLRAQFEQSYSPHNMTGPLVRAFRAPRVDDFDGVEVEYTDGETWAQETVKCLLPGDQGFKLDKIQLRGVTDRTRAWRVGMRRRRELRYRRWDYSFPTEMDALNSRYLSYVPLIGDDPGYGASAILKHIEPAGGSALLHVSEPVNWEPDAQYVVAYRRPDGTLAGPFSARPGDDEYVILADIPQPWPAVTLKQDPPHVYFGTVERWCFPALITGIRPSGMESAQVEAENYDPRVYASDDEQPSG
complement(2826483..2826905)       PHAGE_Pseudo_phi297_NC_016762: hypothetical protein; BBB39_12965; phage(gi374531303)     5.37e-25            BordetellatrematumMNRYLQTHYVKGGRGPLELDCYGLVRLARTELYGKPLLPLCAEARPGDLRAITRAVENVAVLEGMHPVAPAPGAIATAWRASLCVHVGIVVEADGRLWILETDEPTGPCLTRMADFERRYTKVMFYDDQGLPEPASRLAD
complement(2826902..2827387)       PHAGE_Pseudo_phi297_NC_016762: hypothetical protein; BBB39_12970; phage(gi374531302)     1.40e-34            BordetellatrematumMTILAVVYASAPDDEVIIPSLEISVPGLAPIRICAGFEDLELGVDGQLHLFEAGSLQVALPASNATGQQTLTFGVANVNGVAQRYADAALEAGERVALIYREYLASDKSAPARRPLVMTMTGGQFSNGEAQFEAGYYDLLNAAWPRQRYTVENAPGLKYMR
complement(2827384..2827851)       PHAGE_Pseudo_phi297_NC_016762: hypothetical protein; BBB39_12975; phage(gi374531301)     3.82e-29            BordetellatrematumMIETDIYYPEGLPHPLREGKTTRHVQPFRRTTMADGRARQRRVFTSVPSIGSYRFIFDDAQAAAFEVWFKVALQDGAAWFNMPRRTPLGQSVLVCRFTGMYQGPDEHGLNRWAVSAEMEAWERPLLPDEWGLLPGFAAQADIFDIAMNHHWPEAK
complement(2827848..2831015)       PHAGE_Pseudo_phi297_NC_016762: tail tape measure protein; BBB39_12980; phage(gi374531300)     7.83e-71            BordetellatrematumMSENVGTIYYTVEADTAKLLDSIKPADSSLDSLGKTFGRTDKAANAAEFQLTKTAAAVKSLGRESSGASSALGGLGKVLGGLLTLQGVNSLIQMADGYNAMAERVRMATASHEEYEMVQQRLLATANTTYRAMSEAQEVYIQTADSIRAMGYSTSQALDITDSLSYSFVKNATAADRAQSTIRAYDLALNKGKVDAIGWLTIVGAIPTVVGDIATAMGKTEAEIRKMGASGEISARMLNEGLLRSVGANKAAAEGMATTVADAFTKLRNNLAAYVGEANQATGATGILSSAIEGVAENIDLIAKGLMAAGAGALALYIARAGQAALSSVAASAAARKAASAALVEAQARVSATQAALAQAQANAALGGSYTHLTAAQAANAAATAALTTAQRAAATASAGLLSVLGGPAGIIGMVASVAAGMYLFSDSSDQATASLEGMDGTLGSVKEKMKELGEAQRQVMMDKAESSLADELKKLDKAFDKLARGSLADGTRAVAAWRAANSNAIEELIGQAKRGEISYKDLDASLLGMVRTYAQANGRSEEWVSQMTGMIATTAQAARGTEEARAKADKLRQAHDELAAASRNAAAAQGELNDAFDNTDAQAYLNKLRERQAAIEDGNSAVKQAERFIKSLTTASPEMISQIRAQAQATDAAQAAQARLKGGVSAASKAVSEQKSAAAENIKAIDKLAESLMYAGLEGEALAVAQAKSSLNQYATPEQIAAVEGLAKAMHQAAEAKANLEALKQVDPFAGEKARFDSELAQLRKLNQAKAIEDQRYLDLKAQAERKHGDAMFALQEENFRAQSTWNNSLMSSLDAMGAAGAQVISGLAVGMTSGAQAAQMLGQAVLNEVVSSYVKLGIAQVKAWVMGKAAQASAAAGYVASVSGQVAANTALAAQAAFASTAAIPIVGPAMAPSVAAASGAAAASLGAPAVAAASATLAGGRQYGGPVGAGKMYRINETGKPEILNTASGKQYLLPNTRGEVVSNKDATRAGPASAGGVVVQLFENPDRGGQVESYRGADGEEVIALFVADIRGGGRASQAIEGTYGLTRRGM
complement(2831031..2831606)       PHAGE_Pseudo_phi297_NC_016762: hypothetical protein; BBB39_12985; phage(gi374531299)     4.75e-67            BordetellatrematumMILTDIGEVGVHAGERTHVLRPSLYAMSRLGEPAEIVALFVSVMGEAPAMADALAVLYACSEDDLSPMFGAMEIQCDRVVYVPGLADPAQIIPIARCLLRHGVTGALDPLPRAADEEPEYVQEFDARAHVALAMAHLGIRERDAWQMTMTSLVGALRAKFPQQAPGASAPSIEETEAALEWHDRVLAKKSQ
complement(2831609..2832352)       PHAGE_Pseudo_phi297_NC_016762: hypothetical protein; BBB39_12990; phage(gi374531298)     2.76e-93            BordetellatrematumMATCKSQKYTGRVAVLEYAIGCGDAMPTAAEWKRLGAMRAKELTIEWETNDSTADDSIGALREDIASFQTLSVSGDGTLKASGAGAAALIALTKHVVRPDATGGQPVAWIRLTFPDLTFIFYAIVTNMSRSAPYDDVATYSFEASATASDFGLIVEDTPDPDAEDVASVTVTPATGAIPVGGTVALSTVVAPAGAPQGIVYQSSDTSIATVTQAGLVTGVGEGVAEITVRSLADGTKSDIAEITITA
complement(2832362..2832733)       PHAGE_Pseudo_phi297_NC_016762: hypothetical protein; BBB39_12995; phage(gi374531297)     3.45e-38            BordetellatrematumMFDEFKAWAEAVLGSRYSYTQGQWEETTANQAAFFCSLHSLGGPSPDVDDRRPRYRVLLLGPRGQRSAAQQTKVDIQTLAEAAVASDLIPCGAASIRALGEPAGPGYTTENRAWWSLDLQITY
complement(2832726..2833121)       PHAGE_Pseudo_phi297_NC_016762: hypothetical protein; BBB39_13000; phage(gi374531296)     1.17e-44            BordetellatrematumMPVIGIERVRRNFRDAVVRIEKDKTELAVFAVLSQGAALAQTMAPVDSSTLVNSQYAPQIERRAGQTAGQVGYTAAYAAAVHNAPGTLKGLPRASGKGQYWDPNAKPGFLEDGFEQLKPSIPAILRGIYRV
complement(2833130..2833450)       PHAGE_Pseudo_phi297_NC_016762: hypothetical protein; BBB39_13005; phage(gi374531295)     7.71e-41            BordetellatrematumMSATAAWSYTNVATIKPRIGEDSWTGEVQYGPEYEIACTWAAETTQARDDNGAEFVGRHTIYTEDLRPQFLDLIRFQGSSGWEEIRSRTEWDMSPFGEAPDVKLIT
complement(2833447..2833851)       PHAGE_Salmon_vB_SosS_Oslo_NC_018279: hypothetical protein; BBB39_13010; phage(gi399528767)     3.25e-63            BordetellatrematumMLTNEQGKQYLQSQGIENVPDFILAAWVELVNSIQPCLDEHYPAGVALLIQSYLLALMAYGQGDKYIASQSAPSGASRSFRYQGFAERWRGMMALLRGLDTKGCATGLIPPDPTQTAHAGIWIGKGGCHVGGGR
complement(2833888..2834370)       PHAGE_Salmon_vB_SemP_Emek_NC_018275: antirepressor; BBB39_13015; phage(gi399498814)     9.13e-33            BordetellatrematumMKSLTICDTSIGRDDGGRYSLNDLHRASGGAKKHQPAMFMRLGSTKNLIAEIQSTDMQSAFRTVNGGPMRGTYVCKELVYAYAMWINSAFALKVIRAYDAMQTTAHGLWKEMQALIAEEVSTQVRASFGSRLMLERKRAMPDFRRRREQLEARIQPSLIH
complement(2834527..2834913)       PHAGE_Pseudo_JBD44_NC_030929: hypothetical protein; BBB39_13020; phage(gi100025)     7.53e-15            BordetellatrematumMAKYQVVRPWHGVKKGAVLTLDRVHPALAANVMEITDDSRLGHVTVDVSTIATEQAERIIAEAKETIDTMVSAARTEADEIVLAAHEEAGRIRAGATAGEAGGTLTPATPDATAAKRGRPPKVGSSSE
complement(2834924..2836000)       PHAGE_Pseudo_phi297_NC_016762: putative coat protein; BBB39_13025; phage(gi374531291)     0.0                 BordetellatrematumMFLTQSAISAHPRLMGHLQQLQANRNIWNTQNAALIEVNRASMTPEMLQANALAGLGREFWQEVDRQVIQFRDRETGMEIVNDLLGVQTVLDIGKTVKSYNIAGDIADDVSISIDGQAPYSFDHTEYDNDGDPVPIFTAGYGVNWRHNAGLNSVGIDMVLDSQQAKLRKYYKSIVSYTLTGSERIRVDGKPGQGLKNHRNTVKINLGSGAGGVNIDLTTATQQQIIDFFTKGAFGQAARANKVDAYDVLWVSPEIYANMDSDYVNGGVISGTIGDRVKARAKVRDIRETYAFSGNEFLAYQRRQDVVSPLVGMATGVVPLARLRPQDNHNFQIMGAMGMQVKRDGDGKSGVLYGANLA
complement(2836016..2836453)       PHAGE_Pseudo_phi297_NC_016762: hypothetical protein; BBB39_13030; phage(gi374531290)     9.01e-70            BordetellatrematumMSRYRRVNLDGLSVSETRSAAAALLPGTFATISAADKFAQAATASGRLYVVNPAYHQGLSIRDAVPVDDSAVGEYVEEGRELAVLCPAGTYAKDTPIKLGTNGQGAIASDDTDGVLGYSQDAATLTAPDFIRVRFRVGTVAAPAP
complement(2836457..2837731)       PHAGE_Pseudo_phi297_NC_016762: hypothetical protein; BBB39_13035; phage(gi374531289)     0.0                 BordetellatrematumMPMQVNVTTQVNSKQIRRETHNGREHWVVPSHTLPANVVMNGGLYTASEIDAHFHKLEGTLAPLGHPQVNGQFVSAFSPEGINVGHVGAWNRNAKKQGNRVYLEKWIDIEVAQRTEGGQRLIERLEALERGDDVPPVHTSVAVFLDRIEANEQQKKGGYDWIAKIHGMDHDAILLDEPGAATPEQGVGIMVNADLAQPLQANAGALVGESFRERETRIQNAAKARFAPGQDDYVWVADFTDSQVVIVKNGGTPEAYGYTSEGGKIVFDDTGSPVMRQESWVAAAFNSLKRVFNQQARPAATKEGDMPLTPEEKAELTTDISKAVTANMAQAVADALKPVSEAVQTLQANQQALSDTLTANARAEEADKRKAVAAVHGEIVANALSGEPLDVMFKALGTAAPLAPGLIQTNSGVLTADVSALPKE
complement(2837734..2838663)       PHAGE_Pseudo_phi297_NC_016762: putative head morphogenesis protein; BBB39_13040; phage(gi374531288)     1.07e-147           BordetellatrematumMARKPSPPILPRSQEDPTGVDRLERGAMREFKARLRKIARGYVALLDRIPAEPAVNKRYAFRLDPTLLSALLAEGDMLVNAILMEGGERNLWLFESYVAVAYQRGTAQEFASLAQQSPAYKAGQQDLASLLRSEPYQRRLALIRAREFEEMKGLAGQVKADMGRILTDGLGRGLNPRDIARNLTDQAGIEERRANRVARSEVTTALRRARWDEVDEGAERYALQGKQMHLSALSPTTRRTHAERHSKLFTTDEVRDWYAKDGNSINCKCNQVFVLVDEHGRPLVPGIQERTRETYQKMAAREDSEWTKE
complement(2838777..2840132)       PHAGE_Salmon_vB_SosS_Oslo_NC_018279: portal protein; BBB39_13045; phage(gi399528761)     0.0                 BordetellatrematumMANADNLALAVNHAVSQLAAARSRMALLNPGGMGLDAKRNAAWCEYGFKETLTSQDLYKLYRRGGIAHGAVNKLVSTCWKTPPQVIEGDAQDDARKETPWERSLKPTLTASLWRAFAEADRRRLAGRFSALILRIRDSRGWDQPIAAGGRELVEVIPAWEASLTPAEWDTDPQSEGYGKPKAWLYQQVGGNGQLGEIVTIHPDRIFILGDYSLDAIGFLEPAYNSFVSIEKVEGGSGESFLKNAARQLNINFQAEGIDFNSLAATYGVSVQDLQAKFNEVAVEMNRGNDTVLVTQGATTTPLVTAVPDPSPTYNINLQTVSAALDIASRVLVGNQQGERASTEDLKAFNSRCQSRRNGDLTHELHSFVGHLIRIRVVKPVAEYAIVWDDLSEATQAEKLGNAKTMSEINQTALASGEEVFTTDEIRTAAGYDPAEGGPALPDNDDDEDDDE
complement(2840125..2840352)       PHAGE_Pseudo_phi297_NC_016762: hypothetical protein; BBB39_13050; phage(gi374531286)     7.52e-11            BordetellatrematumMAIFKVSARDGSVSLVIRARCISCARQIAVQRSPSTEVRLWRDPARSAVTLIENPEQYGYLREGRQGFIERIQHG
complement(2840352..2841821)       PHAGE_Vibrio_pYD38_B_NC_021561: hypothetical protein; BBB39_13055; phage(gi514231577)     0.0                 BordetellatrematumMTAEASIRAAMCKADGLYFARYFFKHRMGAKMIVAPHHQVIQRTLQRVIDGEITRLIINIPPGYTKTELATINMIGRGLALNNRARFMHLSYSHNLALLNSSTARGIVKSQAYQSMWPMALKDDADSKAMWWTEHGGGVYASSAAGQVTGFRAGHMEPGWQGALIIDDPVKPDDAYSDTVRGGINDRFNETIKSRLAIETTPMVVIMQRIHYHDLSGYLLRGGSGEMWHHLNLPVIIDNSEAYPSENTHGIPVEHGLPDGWLWPYKHNESHRAALFSHRRTAEAQYMQRPRRFNAEGALWNEQLVAAAHALDLRQDLLRTVVAIDPQATNSEESDETGIVAASVYGSGDTRQFSVDGDYSGKFSPAGWAKKAMGAYEQHQADAIVIETNQGGDMAEETLRNAGFKGRIVRVHASKGKFARAEPISALYEQGRVAHRGALYLLENQLMEYVPATAKKSPDRLDAMVWALTELSGAQAMGLMIPKRLLQGR
complement(2841811..2842464)       PHAGE_Escher_HK639_NC_016158: terminase small subunit; BBB39_13060; phage(gi356870601)     3.13e-52            BordetellatrematumMAQQEKPAAPDWERIEADYRAGLLSVREIASSNGVSHVAIGKRAKRDGWERDLQAKIKAKADALVTKAEVTKEVTSEQAVTERRIVDANAQVIADVRVSHRRDIARARSLAMKLLDELEIQTDNIDLLEQIETALANGDDAPDGLMRVFQRVTSIAGRIDSAKKLAEAMKVLVGMEREAYGIVEAAKVEHTGKDGGPVEVVHMTPEAIREVMEKDDC
complement(2842518..2843084)       hypothetical protein; BBB39_13065                                                    N/A                 BordetellatrematumMIFETMLAAIGSGVVSGGAVGVIAKKWMDYSFSVRLAEIEAKNQILAHEHQVRFTRYDEKVTEVIEGAYAIVCEYLDAITEALSKAAASGGQGELEPPEAVSRRFATFMQRQSIYLPEDVAQKLVSVRAELRDAYAQQLTRLRNGSELSGSVLDRVYRNAEFQRQAEDILWDLQELARQHLRRFTVSD
2843313..2843936                   hypothetical protein; BBB39_13070                                                    N/A                 BordetellatrematumMYRIAVEEFDSGNADAGIMAKVWFNTEEQSSQSSQKKEYVRLRVEQLKKADRQKIVGSIKTASTPFLKSAASLTMLLLKAAACLVIAAATTFIFSKSEVFELAFAPLVGAVIAITLVSKPIEWAIKKVLRFFTSDQAFQNYRRSSEALIIAIGTAISLTLFYYVFQNSYSNYPGFYSAPRLFICCAITVIAWRLIFLEKTKRQQSSR
complement(2843993..2844277)       hypothetical protein; BBB39_13075                                                    N/A                 BordetellatrematumMDLMGAYPGRSFRVVELVRHVTKGRELSSREREAARKAVRRVLAAMVENGTAHLASSAEMQGGYDEYSMSHKWDMTSEKVGQKVGQYPQRACVY
complement(2844295..2844651)       hypothetical protein; BBB39_13080                                                    N/A                 BordetellatrematumMRKLTGDDLLWNWARWCWSGETVGNMTVYVSWEDDVRPINTDHARAVEAMHAALPWHERMIVIAEYTKKNSLFADLSAGERIRKARRWIEEVTGVSLTETQYRLYLGLFRDYVERRLA
complement(2844661..2844993)       hypothetical protein; BBB39_13085                                                    N/A                 BordetellatrematumMAHPSTAEQSDRYWRQAAVERLRGMGIKLNRYRQNTEGVAAEIRRIEPAYRGGDSSMVIRAWMGAAAAPRAEVAHRPLALSPAMRFAAARSRLAEPSLKGLGASSAREYP
complement(2844971..2845363)       PHAGE_Salmon_118970_sal3_NC_031940: valyl tRNA synthetase modifier; BBB39_13090; phage(gi100125)     1.11e-29            BordetellatrematumMQILTLPFPPSVNGYWRHPSKGQLAGRHLISEKGRQYRRAVADFVALHRIGRVTGRLSVSIEVFPPDRRKRDLDNLPKGVLDSLAHAGVIADDGDIDSLLIERKGIHKGGMVRVFVATLPGENNGAPEHC
complement(2845364..2846044)       PHAGE_Ralsto_RSP15_NC_030948: portal vertex protein; BBB39_13095; phage(gi100192)     4.12e-50            BordetellatrematumMKVRRFHTNQTGRDFAVGDIHGCFSKLQASLDLIGFDPAVDRLFSVGDLVDRGSESNAVLEWLARPWFHAVMGNHDDMALRWPRGNMEGDIYRRNGGGWNIDQPRETQEAIASAMALLPVAIAVETAFGTVGVVHADVPTPTWAGFVDALEGGVGIRARSAADAAMWSRGRITVGNTYRVPDVRAVVVGHTPVPQLVVLGNVYHIDTGAVFGRPFTLLDLATLEVA
complement(2846044..2846742)       hypothetical protein; BBB39_13100                                                    N/A                 BordetellatrematumMQLTDHHQTTLGALVINEMRLMYGTKFGQQWQGLTARELKDSWDQKLSGMTEREVRTGLTACLTRDWPPSLPEFLRLCRPWMNPEVAYHEAVVGMAARRRGDIGTWSHPAIYWAAVAVGPHDLLNSTFSVMRARWEKAFGDEVGKGEWHAIPEVREALPAPGQTQATREEAEAALKAMGADKALQKKPGRDARAWAAKILAEQAKKGGRRYPFAVLTMAKRALGLELNPGEA
complement(2846729..2847133)       PHAGE_Entero_mEpX1_NC_019709: DNA replication protein O; BBB39_13105; phage(gi428781918)     3.19e-16            BordetellatrematumEKEKDKKQPPPNPRQRGQSFDASAIDLPDWLDREDWAAWVADRKARKKPITEKAAELQIKQLAGLRQQGHAPADVIAHSIASSYQGLFAPSTSNRTAQPGKAQRLADWNDELRNVLAESGRPAEIFMGTIDATH
complement(2847571..2847930)       PHAGE_Entero_P1_NC_005856: Ref; BBB39_13110; phage(gi46401630)                       9.84e-11            BordetellatrematumMKGRNPTAEQKRFWDMLAQHIGCVASRMDGFFDSQCSIHHIEGRTKPDAHWLVLPLSAGNHQDGTGAPGRIAVHPWKARFEKRYGKQRDLLVWCIEQLQAQGLTVPDGALRAAGMLEVA
complement(2847927..2848400)       PHAGE_Shewan_3/49_NC_025466: NinB-like protein; BBB39_13115; phage(gi712916181)      1.87e-06            BordetellatrematumMAKIALKLDERGKLAGLTPFDDRAYTRFKKKLGSLRPGDTISFEHRFPRSPKFHRLHFALLGAIFDNQEQFASPEDLRKWIEVGAGHCQFVPGPKGRLVALPLSIAYDSLDDAEFYEHHTKVVAFLRSPAATRFLWPTVEERAALAGIEAILSGFGS
complement(2848403..2848594)       transcriptional regulator; BBB39_13120                                               N/A                 BordetellatrematumMGIDPSTVSRQKEGLEQFCLLLAAVGLQVSPKNSVITTPHDQKVLKRWAANWLLAEVENEDEA
2848898..2849101                   hypothetical protein; BBB39_13125                                                    N/A                 BordetellatrematumMAKRSTKKPASEKPRAFLLGTMTLTLISETLAEVERLEAAKIGGQPQADMIEIPQTQSDPKGTDHER
complement(2849594..2849809)       hypothetical protein; BBB39_13130                                                    N/A                 BordetellatrematumMNATQIIEIMGGRARVMKLTGLTKGRISQWAKEDHIPKAWMLAFHRMKPRQIPSPAVERPKKPTPQEQSHA
2849891..2850940                   PHAGE_Rhodob_RcapMu_NC_016165: c-repressor; BBB39_13135; phage(gi356870844)          1.05e-12            BordetellatrematumMDKHELRRQRLRQLIDERTNGNAAEFGRRYGYERAQVSQFLSASYNKGRSIGENAAAELERRVGVAPGWLDRANEAGEPAPGQWWPFPSISEGRIRSLSAPQISQIEGAIALALGQLDIGLEVVRATSGQQAPPKVGAVYVPSPDEEDPFPMAPVELAPWEGGKPVDDREHAPPPRLNLDRTVVANVAPGEPQAANERFEKVPELGDVRLAAGEGIENHTEEQTGFVQFRRSFLRSVGADAGRGRVVYAKGDSMEPIIRDGAALLVVPDLGLTLADVAAGGVYAINYDGKMIVKTVAKDRLTGRWVARSFNAQHPDIPLEGEASVRVLGRVVWAGAKLGEDERGQWVRS
2851140..2852180                   PHAGE_Pseudo_phi297_NC_016762: putative ParA protein; BBB39_13140; phage(gi374531271)     9.93e-15            BordetellatrematumMTSGLARIIANHDRSLEEPYDGPIELKRKSYAVTNLRGGIGKSTLSFNLAWMFTRHHSTLVADLCPQRNLTESIMRGQKPEVTVSHALNPKVLGPAFGEVPEDISYRASSLNDHFKGAKSGFLVPGDGALFAFPSALYQQLQQAMAAGNKKAVANILFSLRDVLAEEAKEKKCSRILMDCSPFYGGGTHLSWCAADALIIPVRVDEHSIESLDITLGMLANPASDFNVWADRAGGVPAPKVASIVMTMVGARSPKKGVKDRASQMYVERAYATAAKYPELFDVDDPADAFAITDDFMSAGRISGAEGIPIPKLKVGQFHTVNGSRLQVNQSQTKYRKELEYLLSIL

#### region 4 ####
complement(3312045..3314606)       PHAGE_Burkho_BcepC6B_NC_005887: structural protein; BBB39_15265; phage(gi48697207)     7.85e-107           BordetellatrematumMRTECVNAVSQVLGRPITQAEAQGIEGRINQAMHRLASEDRQAWLGMSQSERLMAAADRAARDVAADAALKRRRVALTALRHDAISNYIANSPHTPIEALRRMLAFYSDGKSGTISIESTANAIRNEALGEVLEVFDALQGRMMGLFADREGILALVRELKGQASGNADAALAAKRFQSMANRLRERFNRSGGNIGRLEDWGMPQSHSQRLAALAGRERWVQDHLAWVDRNRYSNVDGSLMTDAELAEFLGHAWESIATNGANKLEPGQPSGFGMRANRGSQERQIHYRDAETYIEAQQRYSDTPLFQTIIGYVDRMARDIALVETMGPNPNAMMRYWADSARKEMVAASPADSGKIEAELAKLETLYSEVSGAKSSAGSQALAEGFDTYRALNVASKLGSAVITSITDIGTQALTAIYNGMPVTRVFMNELRTLNPAKAADRRQALRAGLGIQQFLGSVNRWGVDGLSQDSRVTGRFARHAQGFAAGVMKLSGMNAVTRAGQQAFGTVMMDSLGSLTRSADDLATLAARGAANGDARLARTLQSYGISDAEFSVWKLAQPEDWRGLGDTVLTAESIYRLTDAQLAPLAAKQGISTTTLRERAATRLMGVVEGEVNMAVVEPGARERSAMYGSFSQRRGSLPTELYRSALQFKSFPISMMMRHGQRAFGQASVAGKAGYVAALVGLTTVFGALALQANEVASGRDPRDMRDPRFWGQSFMKGGALGIYGDFLFADYTQFGSSLAGVVGGPILGDMETLMRATMGNIQRTGEGRDASGAAAVQLLKGKTPFANLWYTKAATDRLIFNQLQELASPGYLRRMERRARREFGQQYYWKPGELAPQRGPDFERAFGS
complement(3314606..3316807)       PHAGE_Burkho_BcepC6B_NC_005887: SLT domain-containing tail structural protein; BBB39_15270; phage(gi48697206)     1.36e-43            BordetellatrematumMAGQAMFEISRIVTQAGVGAAATVASGGAASGALAAGAATAGVASGRSKYLEMVEQGVDPNTAANIGYTEALTIGAGVLMPGAIGYSSLAAPFAAGGVGLSKGAYYGANVAYGAGANIGMGIAQRGAAYQLLKSGGYETMAEQYQPLEAAALTAEGLLGAGFAALGARGGLAGGAQQPAIDAALVARAAKHAAIDTAPGVPADPAAANAHDKGMQTAMRQVLAGEPVDVSQAGLDDAVFVPRPRDSGAQDAALAEYGLELPPAARYAPGDRLAALPVSDRSQLRYDAPELNEYAALVEERHGLPAGLINALKNAGERSNSNQTSPAGARGVMQFMPENLEKYGVTDPTDPLQMLDAAGRYLSDTKRQYGGNVDAMIADYNGGPRQARWVMRGQEPAAKETRDYLARVKEWMGDSGWRASKAVDDSRPPAGRGRLIDDSGEAAPLIEPVRITLPEFATGPMADSLPRIREFARENFAGKTVVNEADGSEISIPWQGIKHSLSGTVSRAVAAAALRIEDVIRKAEPVWSGPDRAGRQNVKAAHFYDAPIEVDGMPAEIRVVVRESNTGKRYYDHFELWKNESPAPGDQRSIQEVSGASVLQSSETNVAQSGAEGNSGAIRGPGESPSVRPATARGQPGETSIDAVTASDAADAGGQPGQGGAGKRAIALADDAETQAGLALLDEKGDLVVPIEIADGEVVNLSLRAALAEANAELKYAKADTLKAAVTCFLTKGM
3316257..3316269                   attL                                                                                 N/A                 AGCGCCGCATCAA
complement(3317110..3319281)       PHAGE_Burkho_BcepC6B_NC_005887: hypothetical protein; BBB39_15275; phage(gi48697205)     1.08e-32            BordetellatrematumMATSRIPIQVGQQRQSHQLGMPAARAPMVAVDDQRGRTVGGLAAGLGQIGTASERLQREQDTAWVSKAASDDQIKWLQRLNELQTAAAPGAPGFTPSLIKEFDDYSAQALENAPENARPFYREQLIRQRSYLGQRAVEFEARSQRDFITSQYQAGMESDAATIALDPAQYRERRAARVAALQTSSLPDAVKAKLLGESEAALAYAAGAATIDRDPRGAMAAFEAGSRGEAMPVGFDWVRQLDADRIQQLRTRANTQADRLDNRDRVEADRIQARAGRALGEMDKQIASGLPPKTEDMVRWAGMTMGTEFEAGYRERMAGFEDVQKVLRMPPADQQAFIERRRVELERGGGNSTDKANLDRLEKAVEADGALRRDQPLSWIARRAGVASPALDMRLLSTPDGAAQIGPVLRDRADAIRGLQGSHPAGAVNMRPLPPAEAEQLTETFKAASPREKQRMLGNLYWAAGEHDTYQGIMDQIDGADPFLARLGRLSGSLEEGKLQGNWFSPDVLQSAGDVVATAIAGDEILKAGGKVGSLSYPLPKDDEFTQAIADQVGDLYRGVAAGDSSASEFLHDAYAVKAYYLGRAAQEGDLSPDVNSDRLSQAITAVLGQTVDFHGNGRVQAPWGMSESDFMARANTAVFRELNARGMQEKMGRSMSSVGLIGVGAGAYALTLGGMPVLDPQSKDLVIITMTPDNDAGRDEFGGQLGDLIPNPAADAMAGVQQ
complement(3319284..3319901)       PHAGE_Burkho_BcepC6B_NC_005887: hypothetical protein; BBB39_15280; phage(gi48697204)     3.44e-25            BordetellatrematumMDPVSAFLVANAGTISAVAGGVGAIGSVMQGNAQAAGYSQQADAADRNAQIADIQARQAYDAGLQNELTQRRSNAQQQGDVRAAVAESGLDGTTGSALLLQQQSAQNLEMDALTTRYQALLQGNAYEQEGAMQRYTAKTLRASGRNARQAGYLGAATSLLTSAAGYGLGRGAAAASSGTTGAAGAGLRVGSGTGLRVGDVSRYWG
complement(3319901..3320326)       PHAGE_Burkho_BcepC6B_NC_005887: hypothetical protein; BBB39_15285; phage(gi48697203)     4.56e-36            BordetellatrematumMRIVRLQAEHVQAVQLQDAQAFALPMIDVEHARQLASAQGVAWSALDGGRVIACAGIVQAHAQRGMAWALFSGAALQKFKLIHRVTRDVVNSAPWRRIEMTVDVNHAAAVAWAERLGFQREGLMRAATLDGRDCFLYAKVK
complement(3320323..3322584)       PHAGE_Burkho_BcepC6B_NC_005887: hypothetical protein; BBB39_15290; phage(gi48697202)     0.0                 BordetellatrematumMAKDTPIQNTFDGGLLSPMLAGRTDLAKYFNGCAVLENFLPSVQGPLVRRGGTQFIFGVKDHAARCWLVRFQVSERVAYMLEIGPGYIRFYTNRGLLVADGTPVEVQTPYTAEDLTSEDGTCGIRVVQSADTMYIFHRRHQPRKLLRRAADEFVLQRATFSEGPFDDVNTDKAAVVTADAETGAVTLTASSDIFEPGHVGTLFFIESADLAAVKPWAVHKRVNVDFRRRVDARVYLCTATGDGEAAVSGNVTPVHTSGRAWDGDGIDIADDQLGPIGVEWEFLHAGYGIVQIESRIDARTVSGTIIKRLPEDLKTGGSSKWAFSLFSDVNGWPEHGAFWRQRLVLMSGRTGAMSVTADFENFAAKTEGGEQETDSAIVFRLNARQINRAVWLVESDDLMIGTDGDEWIVGPIQSNQAVGPANIRAERRTAYGSRSIQPVEVGSRVLFIQTSGRKLRDYEFSYDTNNFASSDTTKLAANILQSGAVDMAYQQEPDSVIWIARADGLLVGCTYDQEAGRSDVYAWHPHPMLNGHVEAVESMPAPDGAADDLWLLVRREVNGTVVRYVEILRAPLAHEADQAEAFYVDSGLTYRGPETDELSGLDHLEGQAIDILTDGAAHPRRTVTGGRVSLQFPAQVAHAGLPTACAMATMSIEAGASAGTAQGKIKRITNVIVRMLRSLGGNMGPSRDKTNTLNFRRPSQPMGKAPPLYTGDSEPMPWPGGYERGAQIWYTNDQPLPVTIVALMPVVSTSEDR
complement(3322584..3323171)       PHAGE_Burkho_BcepC6B_NC_005887: hypothetical protein; BBB39_15295; phage(gi48697201)     1.82e-68            BordetellatrematumMAVSLVDIANRALTKLGAGRIISLDDDSQASNTLSSMFGIVRDAELRKNLWHFSKARAELPAISSAPLFGFSHHYQLPADFLRLIEVNGRGCRARPQLDAWYSIEGGRILINQAGPLRIRYARRVEDPNLFDALFVEALACKLAFEACETLTNSNSKKQMAADEYAVAVADARRMNAIERPAQAISDDTWLESRY
complement(3323184..3323471)       hypothetical protein; BBB39_15300                                                    N/A                 BordetellatrematumMTRYIALERGQIPADDIKPGKRADSSPNRRVMRMIEKGEEFTFHGKPGKWMKKVDSSDQNSASGNETGRKPGRQASGQKSASENPTPVGAEQVLP
complement(3323476..3323922)       PHAGE_Pseudo_AF_NC_019923: hypothetical protein; BBB39_15305; phage(gi431810301)     1.48e-50            BordetellatrematumMILDKSNEFSDSQAITATAVSTNVIDLNPSNKNPIQDIGAGEPVWLVVQADETAAAAGAATVTITLESSAAPSMTSPTVHFSSGALALSALTAGATLVRTRLASGDYKRYLGVRFSVSTGPLTAGAFSAFIVKDVQANRDYASGYTVE
complement(3323979..3324992)       PHAGE_Pseudo_AF_NC_019923: putative major capsid protein; BBB39_15310; phage(gi431810300)     6.78e-107           BordetellatrematumMATIGNQSLSIIDVAKRLDPNGDTADVAELLAQTNEIIQDIPWVEGNLPTGNRSTIRTGLPKPTWRKMYGGVPVSKSTTAQVDDTCGQLTSRSEPDVDSVRMANDPASFRMDEASTHIEAMGQEFCTALLYGDTSVDPEQFFGLQPRYNEMAGPNSSPSAQNVVDGLGSGSDNTSIYLIGWGKTTAFGIYPKNSKAGLVHQDLGEIDAFDKNNNRYRAYADLFKWDCGLVVKDWRYVARLANIDVSDVSSGTGTMANQKLIELLIDLKHRLPRLSGNVQPRIYVNRTIRAALDKMALNKSHNALSIREAAGQFETAFLGIPIRTVDQLLNTEARVTA
complement(3325011..3325757)       PHAGE_Burkho_BcepC6B_NC_005887: hypothetical protein; BBB39_15315; phage(gi48697197)     3.79e-37            BordetellatrematumMHALNKRFLLTRLLREAADPDTPPAGGAPAADTGAATPPTAEPQTTAPSWRDSIQDDGLKAFLDGKGFESPGDALKALQDLEGKTVIPESAEAYQLPVPEGQDGAFAIEAAKWMHEAGVPVAQAQALAEKWNAYQAEQAQAADLARQQQGEADVAALRKEWGGQYDANLELGRRAVRAFVGQGEDAGPTLEKIESALGAAETFRLFHRIGKHLGEGTLAPEGGERGGAAAPADPDAARAARMFPSMSK
complement(3325741..3326040)       hypothetical protein; BBB39_15320                                                    N/A                 BordetellatrematumMIPLRFRLMFGRRVAYRRAFLDDRGQLTEAGQRVMADLAKFCRVRESITIVSPVTRTVDTHASLQAEGRREVFNRLAYYLNLSEQDIYQLMEREHARPE
complement(3326043..3327692)       PHAGE_Burkho_BcepC6B_NC_005887: hypothetical protein; BBB39_15325; phage(gi48697195)     3.25e-176           BordetellatrematumMDNQDVDLIREVLADHEAMKQTRQSFEAQWDQVTEAALPRYRKFSQASANSPGEKRTQEQFDSTPILALRHFAAAMDSMITPRTQKWHGLTVANPELRDLPAVKAYLEQVTDALFAHRYRWRANFASQSGASYIGYGAYGAGGLMVDEVLGQGIRYRNLRMNRLWFAEDAYGVVNKAHILWTLTARQAAEKWGTGNLPLFIRNAIDRNDLERRFDFLHAIRPRRDREHGKVDGRNMPIQSVWLPLDAETQIVEHSGFRVFPVAIGRFYDADDSAYGYSPAMEALPDVRMLNRMEKTNIKGAEKAVDPPLILPDDGALEAFDLRAGALNFGYMNSNGTPLIQPLNLGKNVPMGMDYANQKRESINLAFYVTLFQILVDNHQMTATEVLQRAQEKGILLGPTMGRVQSEQLGAQISRELDILDHAGVLPPMPPELEEEGGLVDIEYNSPLNQAMRADEGANVLRWAEASAPFIQADPNAARAMNAEAIVRGLGDVFSVPQKYLRTQEEVGAMDQAAAEQQQAAQLLEAAPVAAGAAKDLTAAAVNASSARI
complement(3328463..3329884)       PHAGE_Burkho_BcepC6B_NC_005887: putative TerL; BBB39_15330; phage(gi48697193)        0.0                 BordetellatrematumMQPEIHYDYAAQGPTLAAYIASREPRTMIMGPLGSGKTNASCWRAFELMCQQEPDAHGVRRSRGAAVRNTYPDLMSTTTKDWLEMFGDLGRWVAGGLEPPTHYLSFDLDDGTTVEAELVFIALDRPEHERKLRGLQLTFAWLNEVKELAKAIVDMLDLRVGRFPKDVRPTWFGIFGDTNAPDNDHWYYKLAEETKPEGWAFLRQPGGVVKVGETWQVNPDAENLSNLPPGYYERGMQGKKEDWIKVNLANQYGFVVDGKPVHPDYQDSMHCRVFELDRHQPLLLGIDFGLTPAVVFGQRRAMGGWRIRSELVATNMGAKAFAQEIHLHLAQQYQGFDIGGFWGDPSGDNRAQTDETTPFQILKAAGLPAVPAPTNDPILRLGAVDSALTRIVDGEPGLLVHPDCKTLRKALSGGYCYRRMAVSGERFADKPVKNEYSHVADAAQYLLVGGGEHKPLVRVRRPAGSRPARAIMD
complement(3329884..3330369)       PHAGE_Aggreg_S1249_NC_013597: hypothetical protein; BBB39_15335; phage(gi100029)     2.03e-19            BordetellatrematumMNPDSERARLFVQEYLVDLNATAAAERAGYSKRSAKQIGYALLQLPLIRERIAAAQQERIARTQITQDNVLQELSSMTLYDAGEIGRYQITKPEDVQKLPEHLRRCVVGWSWDKAGNFVLKLADKLGAATLAMRHLGMLNDKLTIQRPRVTRRDLTGRKDA
complement(3330379..3330792)       PHAGE_Burkho_BcepC6B_NC_005887: hypothetical protein; BBB39_15340; phage(gi48697191)     1.15e-14            BordetellatrematumMRLTDFDWPEIVLDLRRAGMAQHEVARALGPAAGESMVRQYLAGATPAHWRGELLLALWEEKTGRVRADAPRRPAEARRVPERRRRMSGTAQMPAEQLLAVARAYNMSVTTLTHLLNRGRRQSQARAHNLSLPGFED
complement(3330797..3331264)       PHAGE_Mycoba_Phipps_NC_028942: gp6; BBB39_15345; phage(gi971758400)                  4.32e-06            BordetellatrematumMNVNILALDLGTKTGYALRRRDGTLRYGTEEFTPRASWTPGQKWQRYRAWLSKIIAEEAVNLIVFEDVKAHGKGAVLAAHAYGGFRAMLEMVADGHRVRLLPVGVGTIKKHWTGKGNANKDAMLAQAKARGFRPETDNDADALAILHWAVEQEAG
complement(3331624..3332109)       hypothetical protein; BBB39_15350                                                    N/A                 BordetellatrematumMSYAEAGAAVSHGQTHAHHDHRACSVPGCVLPGTIADSTTGSADWVCSIHHGASHSEQAGISARMANRRKLLILAQRLSNAGAADPVPQQVTEWVKAQGRADLLPSSPTTCRKLGASMLRTLTDECRAPQARVGDTTKPKGQRDSWSSAADAATAFLGGLA
complement(3332106..3333143)       PHAGE_Thalas_BA3_NC_009990: hypothetical protein; BBB39_15355; phage(gi160700630)     3.02e-12            BordetellatrematumMNYYEHHIRDYDAATAHLSWDEDMAYTRLMRWYYRKEQPIPADIKEACRQIRATSKAQRDAVSAVLHEFFELREDGWHQETCDAVIEAFQAGEPEREAKKANEENRLRRHREERARLFKILTDAGEHAPWNIKIDDLRSMVEGIQARAAATHQGLPETGTDTPPETAPATPATATQTPDTNHQTPVLKEERDSAGAQGDEPGGYLPSGTPYGLMAKLLRSRGVDVSPGNPHFRAWVDQGLTEDEAIAGIEAARLAKPAPEAIPWAYLAKTLETARAKAAAVPEKGAEPAKPKQSEDRWWLNNAGIDRKGRELGLFARGGESYLDFKDRIFEAIRRRDAAAQEQTA
complement(3333140..3333352)       PHAGE_Burkho_BcepMigl_NC_019917: hypothetical protein; BBB39_15360; phage(gi431809873)     8.36e-10            BordetellatrematumMTQKISQLSGQLCSREDFRAFCGTTTADEAAAFIRRVCRVQSRRELDHNPEARDRFHELVRKPFAYRTAP
complement(3333354..3333644)       PHAGE_Burkho_KS5_NC_015265: gp9; BBB39_15365; phage(gi327198007)                     7.84e-06            BordetellatrematumMHGGHDEETLVRRLLRSLDKAKRLAVMQACGWEDESSISQVISGRAGIKLEQLDALLGVLGLSIQEDEYMDYLRKGNTIGANCCRASASLGYCRAR
3334008..3334298                   hypothetical protein; BBB39_15370                                                    N/A                 BordetellatrematumMKELEQLTEVVMSMHASIVDLQGKVLAQGAALEALCRTLPPQWQPQAARNLQESAEHLLELMDDEPTPPELRERLSLQVAALLEALGQPPGRPAGK
complement(3334313..3334540)       hypothetical protein; BBB39_15375                                                    N/A                 BordetellatrematumMDHDQHPDAALIDGLGGPTATAKRLDILDEPGAVQRVSNWKRRGIPARVRLDHAEVFAEAAAAATAQPAPAQEGA
3334645..3335040                   hypothetical protein; BBB39_15380                                                    N/A                 BordetellatrematumMHEQMARMYEAARAAGRLSGEADQTDLARLLNVAPQNVHNWEKRGPSKDALLDAQAAFGVNATWVTTGSGPMFVGGAAPATDEKWPFARLDLRRIQRLSPDERAYVEGKLEAVIEAVEARIQEQKSGQHAA
3335104..3335442                   hypothetical protein; BBB39_15385                                                    N/A                 BordetellatrematumMPAMFSMVLFSDDKLTMHLNWFGMGALTIIDAHGRKRRAHPIQKRYLQAVTRELQAIGVKITPDDPVCRHALGEIAHAIYDFPPGGLVWTTALNRSPRETALAFFEEAKQPG
3335562..3335744                   hypothetical protein; BBB39_15390                                                    N/A                 BordetellatrematumMDHITDEQAVQAMSQYGGNFVKQLARLWQLADFTNRARIASAFGDEFGRYRELAGQSVEA
3335747..3336103                   hypothetical protein; BBB39_15395                                                    N/A                 BordetellatrematumMLTPSYRRDDPSRTASPYAGPGETYPGDVPEVDRDEAVTAVQAVLANEAAYAYGETAEWWAEVLMDHVSNLRENVLLALLDTGDCPSIRAGLAELLGRFIQATAQERVNAQCAMGVYQ
3336195..3336680                   PHAGE_Synech_S_CAM7_NC_031927: o-spanin; BBB39_15400; phage(gi100248)                1.67e-05            BordetellatrematumMTPSRKKVEGARPKFIEWLVARGAQVLRPTSEWELVRFDCASGVAIVYGNSKGGTTFTGEALKAWEAFKGNGAWSAGVRTKRVKLSPVVRTLLERDGDRCFYCFGHTDDTDRSVEHLVPAAHGGPNHISNLVLAHGACNQRAGHLSAMEKIRMRERARGAQ
3336677..3336901                   hypothetical protein; BBB39_15405                                                    N/A                 BordetellatrematumMTRLCTLSRRALALYLLAYRKQWDINVACYGLCSAAIVFSLLLMTGVIGPTLDAHGEPIHTASDGGKTAYAAKE
3336904..3337107                   hypothetical protein; BBB39_15410                                                    N/A                 BordetellatrematumMSRIPHGGPGEIPPVDERVPADAFDNAIRAFGVVAACEWFGHDPDSQFTADTIRELRIRSGIPESEA
3337104..3338012                   PHAGE_Pseudo_PPpW_3_NC_023006: hypothetical protein; BBB39_15415; phage(gi564292513)     2.20e-49            BordetellatrematumMNAITEPVAMIDAPRVIVGLPIEEYHGGPGISKTGLDRINVSPANFYDLTLNPARPPEPERKGQLEGQLAHCAILEPDEFDKRYAVLPADAPRRPTDAQWNAKKPSPESVEAMEWWAAWNKSSAGRTIISHAQRETALRQSEAVRRLPDVAEALAAGVAESSAYWIDAETGVLCRCRPDWVHPVGESGVIQLDVKTFSDASPAEFARQIARKRYHVQDAYYSDGYAAASGKDVLAFIFVAVQDAWPFAASAVMLDPQSQAQGRRDYRRNLSTYAECLASGEWPGFGQGIHLATLPGWAFNDE
3338024..3339016                   PHAGE_Salmon_epsilon15_NC_004775: RecT; BBB39_15420; phage(gi30387413)               7.59e-74            BordetellatrematumMSQTTSLADLKKTSKMVASQAGIGQVKTFFESQKATLAAVLPRHVSADRMLKIALGALRTTPKLMGCTVESLMGAVVQVSQLGLEPNTPLGHAYLIPFENRQKGIVEVQIVLGYKGLIDLARRSGQIVSIAAHAVHANDHFEYAYGLDEKLEHRPAMGERGDIVAFYAVAKLVGGGHAFEVMSYQQVLDIRDASQGWKQAKRYGKEASSPWGGHFSEMGRKTVLRRLFKYLPVSIELASAAALDELNARGESQALDNVLDGDYITPAPADDDAPAALAYDPSPILQQITEATTIDALDLVGDSLRDAPDEHYDALQRAYQNRRAELTPAA
3339096..3339611                   hypothetical protein; BBB39_15425                                                    N/A                 BordetellatrematumMYSAHEQECRLHFDSNTKKDDQPSATLKLTYSTSNDVLSEFSPDLKASLYRRPHRGEGDMADNADPRLDDPGYLPCLKFPNMQNKVVLSEKVVGATVIVHHGIGGKSDLTMEECTVSKFRLDPQEGGTVVVSMEVDCVPTKEQAGELHMKQNQDVVVSIVPPSANDGQLQL
3339697..3340200                   hypothetical protein; BBB39_15430                                                    N/A                 BordetellatrematumMTPAPLNRQQRRQLAQQQARQRAIRRVERPVHIPMLVKAQYTLEPLESVIDQIERTGNVDTDQRGTPIFFCNADGGWYESAPAIDGMADFFDMWAIRHDKPLDVAPLRQLAARLAAGMPLDGPLMAGLQALLPRLRRVASTLDAGEAIDLLRGTQINEARKKLEANS
3340197..3341294                   PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; BBB39_15435; phage(gi374531692)     3.88e-10            BordetellatrematumMKQQIISLLERAKENGRTIGDVLAEVRGFSDGWQPIATAPKGGAEIWGFNGEQARMLWSEGEHWALWVWADSSLADIDPSPDQPTHWMPLPAAPGAEDSASRPAAPAAAERAPVDDLRSALAGLLDYVDRTTCTHEETHRGGVIWTICDDCGRKWADDEGGFVPHQDAPAVAAARAALASAPVAGEAQPVAWFIDWPDEPELGHYIAESPADSGRSRPLIFADASPQESTPVPEDPVYAYRRKGLGDFVTCDRERFDELSTKPRLFETRIFYAAPQASPAADGRDALPPLDENLTLILGRPNFACAQLAQMLRASGQTIKHRTEDEQAAVIYFLLSAYLKHGAGWADKASEALAAIAAQQGEGGA
3341294..3341635                   hypothetical protein; BBB39_15440                                                    N/A                 BordetellatrematumMGVKIEESLAMDDSCQVKFWARGHIPWGGFIEALERHIDESGRDIPHWVVVQAPVCQLYQRSVPYRGSTVGDTQFVHHDKPSRGAYPVTVMEFWFPLHAHRPRAAQQGEGGGV
3341632..3341826                   hypothetical protein; BBB39_15445                                                    N/A                 BordetellatrematumMSDRDWYVPPYRNAFLLGYRAQRVKWADFAGVCMSLDGKRFWTRNAAERRAAELNAAQQHKGEA
3341826..3342518                   PHAGE_Sinorh_phiLM21_NC_029046: hypothetical protein; BBB39_15450; phage(gi981221041)     6.01e-45            BordetellatrematumMANLTETQFLKDVESHVIEVMRNDGVYRHIRFRKPGTMCMHFDLITWPGYLCYTGDMGTYVFSRLTDMFEFFRTDREYAQRAGRRLPVNLSYWSEKLQAVDGGRRNGAAKEFSAEKMQRVIRDTRLRWIRDAHADCSLDKDQRRELWEAVEDDVLSQIEDSEDCAYAAARDFAWRAMPGGRPWEFQDFWEYDFTDYTHRFRWCCFALSWGIEVYDLASAAPSSQGEGEAA
3342515..3342733                   hypothetical protein; BBB39_15455                                                    N/A                 BordetellatrematumMTPNTSNPALADAALTATNLWGQVYLGCRWLYGIPHQAADAVADEAEESFEGDLCTGLDDLHWTINEIARAD
3342790..3342969                   hypothetical protein; BBB39_15460                                                    N/A                 BordetellatrematumMLTEAAEELRACHTLTPGDWTGEPEAKAHYDRIMTVVNGLEKLRQDNEHSANAGATKES
3342971..3343210                   hypothetical protein; BBB39_15465                                                    N/A                 BordetellatrematumMMTLEPAQLERMLEEAARRGANMAIEDMVCYHLQDACDRLGISYNTLQRRIKEGKIRPVDGRITGAELRRYLSQSRGDA
3343113..3343125                   attR                                                                                 N/A                 AGCGCCGCATCAA
complement(3343184..3344167)       PHAGE_Mannhe_phiMHaA1_NC_008201: integrase; BBB39_15470; phage(gi109289985)          1.87e-49            BordetellatrematumMASIQKTAKGYRAQIKTQGIRDSQVFPTRREAVEWAARREAEIRDQATTPLGEQHTLQQALRKYADEVSPQKRGERWEQIRLAAFESYRLPLDLPISRVTAQHIATFRDARGASVGPAAVLRELTLLSSVFEAARLEWGWVDKNPCRDIRKPQAVKHRERVIQWWEIRRLLRGMGHRRNGRVASTGQAVAMCMLLALRTGMRAGELCGLTWPNVHDQHVHLPMTKAGRPRDVPLSSRAKRIVKRMEGWDDALVFGLKTASLDALFRKYRQRAGLEGFTWHDTRHTAATMLARKLDLLDLCKMFGWADPRYAAVYYNPHASSIAARLG

#### region 5 ####
complement(3449123..3449392)       PHAGE_Provid_Redjac_NC_018832: endolysin like protein; BBB39_15990; phage(gi410490772)     3.89e-05            BordetellatrematumMPVWFERIKGWLLLAGLALAALASVFYRGRATGRRAERQERQDQINEQAAKARQEVRDVQMEVARKDDDAVAAGLKSRWVRGPGGKGGG
complement(3449376..3449873)       PHAGE_Pseudo_PS_1_NC_029066: hypothetical protein; BBB39_15995; phage(gi985757722)     1.96e-56            BordetellatrematumMTLDQIIKWAINPALALLPPGMDTPAARVMLLSIGLQESRFLHRRQLGNGPARGLWQFERGGGVRGVLTHPASREHAYRICGLRGVEPVAAVVHPALEFDDVLAAAFARLLMWTDAWRLPAVGDVKGGWELYIRTWRPGKPHPQTWGGLYAQAVAGVEGGNASVV
complement(3449876..3450319)       PHAGE_Pseudo_MP29_NC_011613: hypothetical protein; BBB39_16000; phage(gi215479996)     1.65e-15            BordetellatrematumMEPSTTGVGGWAAIKLALAFGLPAALAAALGLLIMPPRTAREFVTRIVCTVVSSFAFGPLLAIGMLSWRPSLAEQAHWLAQRAGTGEDSLLAMLYMLGPCMLLAGLPAWWVLGAYMRCMASMREKGLLAWLGEVRGRLLGWRRGGEG
complement(3450409..3450594)       hypothetical protein; BBB39_16005                                                    N/A                 BordetellatrematumMKIKFRRDYRELRRAAYPSIGDQLDAVMKLAQHLQGAGMTLPDEVSAWVESCQRVKDAHPK
complement(3450605..3451015)       hypothetical protein; BBB39_16010                                                    N/A                 BordetellatrematumMGANEGLSADSYPDDFYGQWTMFDKTTGQAMYVVTCPWATAVSTAVVAGLGAAFGAADPDRHLVIDGQFVERARMPIVVEGLRLSSVPFPACLTIEGQGMPDIEGPTVEFDFLPGDSYAVEIRRDPYLPWRHTFSL
complement(3451024..3455301)       PHAGE_Burkho_KS9_NC_013055: tail tip fiber protein gp19; BBB39_16015; phage(gi255033750)     0.0                 BordetellatrematumMHGWDELLRDIYLDETPVQNEDGTLNFEGVVADFRSGTQDQDYIPGFPASESMIGVGVELRADQPFVRQLTNTALSAARITLEFRGLTSADTKKGDISGYRVEYAIDVQTDGGAYVTVLQAAADGKTTSSYSRTHRVDLPKATNRWNLRVRRLTPNANSATVGDTTFVHSIAEVIDVKLRHPMTALVGLQVDASQFQSVPARAYHLRGRILSVPSNYDPERGNYAGVWDGTFKQAYSNNPAWVFYDIVSNDRYGMGAFIPAGKLSQLKWSLYQIARYCDELVPDGLGGQERRFTCNLYLQSQADAWRVISDIAGIFRGMAYETGGAILAAADMPSDPAYNYSAGNIIGGRVTYTGSPLSTRYTLARVSWTDMSDMGRAKVEVVTDQEGQARYGIRPLDITAFGCSSRSQAIRAGQWALLTSRLETQVAQWQVGMDEALVAPGKVVRLADPHLAGRQIGGRIHAATATEVTVDVQIGVRPGDRLVVNLPSGISESRTVSDAVGHFLTADSTEWTADSTEITADMVGLPGSTLKIVVTQPFSEVPAPEAVWTLESEDLSVQLMRILSVAKKDGIVAEIKATQYEPSKFPAIDHGTKLDPLPVTVIPPSVQPAPGQVLLTSRSVIDQGIARHDATISWSAVSGATAYQVQWRRDNSDWIEGGRTGSCELDLADIRAGAYVARVRAINAANVPSIWAVSQETVLEGDLAPPPAVPLLTAKGIVFGIELGWAFPEGPLALEHTELRYSSTPSFDDAIPLGVFPYPQRGHTLMGLSSGRRLWFWARFVDRLGLPGPWFPEAGAGILGEASADASEILDYIKGQIDQTMLSAELKGEIAEIPGLKSGLAQEIADRTLQGQQLGAAITAEEDARKGEDEALARRVTAVAAKADANAAAIQVEEEARASADEALSQRVTTVAASAAAADTKANGAQQAAQAASDLAGGKGKVLYGTSAPAAADRQSQNLWIDTSGGANTPKRWNGSAWSAVTDKVATDAAAAAAAAQQSALANAAAIQREELARADADSALAQSITTVSAATSAADGKAQAAQDAAQAASDLAGGKGKVIFRSSAPVAADRLPQNLWIDTAGNANTPKRWNGSAWVAATDKAATDAAAAAAAAQQGVATNAAAIQQEATARANADGALSQLIDTAQATAGDAKASAQLAQTAVASTDGKLAAMTTIKTQVTSGGKPFMAGIGVGVENDNGLLTSQILLSAQRVAVLDEANGGESVPFVIQGGKTYINQALIGDAWIRNAMIESLRAEKVTAGEMSAERIESNSLKSKLANFDTAYIKTAHIGLAEVDTLRLKSGAVVAGNVMSVYIAVGRTSGTNWQQVTIDIPYGASGVLIFWDLSVSGGPWSNQLEIGTNLYGTILSGTGDAATYASWGDKSFYVGGSVASGSQLTLTVYGQRPRDGTCYTTGRVNILVIQR
complement(3455529..3456140)       PHAGE_Burkho_KS9_NC_013055: tail component protein gp18; BBB39_16020; phage(gi255033749)     1.55e-48            BordetellatrematumMSATTLRTVRLSGELGAKFGKVYKLAVCSVAEAVAALCAVVPGFEAELLGAEGRGVRYACFVAGRNVGEAQLEDIADGDIRIAPVLSGSKNGGLFQVVLGAALVVGAGLAIPGGGAFAALGAGGFAGAVAGVGMAMFFGGIVQLISPQQRAVSARDNPENGASYNFNGAANTTAQGNCYPVLYGELFVGSQVLSAGIYAEDQA
complement(3456137..3456913)       PHAGE_Burkho_KS9_NC_013055: tail component protein gp17; BBB39_16025; phage(gi255033748)     2.59e-67            BordetellatrematumMLKRTIRAIQAHAIAEYPREACGLVVMVGRSERYFPCRNLAPGNDHFSMCPDDWAAAEDLGRIALVVHSHPEASAAPSAADRVSCEAHRLPWLIVEVRKGDDGLVVTGEMRSFRPEGYQAPLLGRPFEHGVLDCYSVIRDWYLRERGIELLDFERADGWWHGEDELYLDQFQEAGFRPLRAGEAMQTGDMILMQHMSARTNHGGLYLGDAPLSEAPGLHPIPNAMLHHLYGRPSERVVYGGYWRDITRLVVRYEGRGV
complement(3456913..3457659)       PHAGE_Burkho_KS9_NC_013055: minor tail protein gp16; BBB39_16030; phage(gi255033747)     2.92e-78            BordetellatrematumMPINSDVQRLSPGNRVTLFELDCTAIGGDVLRFHGYPQQRSIFWKGAEYRPWAIEARDFERTGESRQPSPTLAVGNIGVAANGESVPGVISSMCRALGDLVGAVLTVRETFEQYLDAANFPGGNPSANANQELPTEVWVIEQKTMESPEIVEFELSNSLSFDGRKLPGRQITAGICHWLWIGGYRGPYCGYTHNAYFDAQNDPVRDPALDRCAGLVSSCQLRFAAAQGVKPVEAVVNFGGAPSADRLR
complement(3457711..3458034)       hypothetical protein; BBB39_16035                                                    N/A                 BordetellatrematumMTQPYLYEILIRGASSGIAGAHVVYAADSVNALTGETRTDVGAAQPVVLQDPLNAILGEVTVKAIQENDALKATVSRLNDELLARSSELEAMQLALTEAQAQLAGNP
complement(3458031..3459236)       hypothetical protein; BBB39_16040                                                    N/A                 BordetellatrematumMAIQKINTSQPNDRRGDDARVSFTKVNANFAELDTRATAAQNTADAAKAKADAAIPSASKDQASGVAGLTPDRAVGRPVQVAQMPVGLTSTGGPVSSNKRQVVSVGTAVSEAGTAQPPRYLIFKWNSAGHTMFRVEIAGYVNATASLVYAQLAGYIQSSGSILNVTLSHFGNSRPPIGMCRRGVNQNCIVIDLQGISYPAISIIDAQFAYPGSTDLAMMSFSHEFVDTITEPIVWGVDAGPAASYVRPDEVARAVDRGFLAEGANLNQLLTEGVHKISSGVVGASLVGGPSWLKAVAGSVTVTRGGNGVFIQDLIQTVGAREGVEKSTRYITASAQSVWQKAVFEDTVFAALRMASYTKATVPSASANSGAVVHVSNAAGGAALAVSNGTAWISQITGAEV
complement(3459236..3459574)       PHAGE_Entero_mEp235_NC_019708: minor tail protein M; BBB39_16045; phage(gi428781826)     8.04e-34            BordetellatrematumMDYERFGWSPRLNPTGDVSFRSLEARFGQGYVQRAGDGINPRSESWPLQFAGYSGKVAPIKDFLDRHWGRIPFLWTPPLGTEGLYVAKGYSLNPLGGDIYIISATFEQEFRP
complement(3459574..3462552)       PHAGE_Idioma_Phi1M2_2_NC_025471: putative tail tape measure protein; BBB39_16050; phage(gi722142267)     2.18e-33            BordetellatrematumMATAGSIIIDLLARTGSFETDMQRAARSSRKASKEVESGWADAARAVKSSLAGLGVAAGFGALVQNTVNAQNEQAQLAAVLTSTGRAAVMTAGDLNKMAAEMEKLSTFSAGDVNQAQTALLAFTGIAANEFPRAMQAAADMAARTGMTIKAAAETVGRSLDVPSEGLASLSRQGFRFTAEQKALVEQLEQTGRIAEAQGVVLQSLEESYGGAAVAARDTLGGALTGLRNTISSLLTDDSGLGGLRNAVEFLNDALGSDAAKAGIQALVVGIGALSVAVGARLAAGAVKSALGFISLQLAAARTAVTLAGVTGASGPATAGLTALALAGRAASGALAFVGGPIGAIVLAIGAAGYAWSQYGRDARAAASAGAREVADTKGGIDELVASFQKLNTLQRQQVVNIKTSELDAALKASRTAIFDLGNAFEPSLAEGTRAAAKYRADFTAEIKAVASDTSLSAEHMAVAMSGVVESYIASGRASESSRGRLVELAQKVVEASGNVAGLRQEIDALTDAQARAAGGVGPVVDGLDKFRTAYDQFMKQYATPAERFAAAEKEWRERLGPLYDSDAQNRLRASLLPRGGGQQTSEVQGLVKRLEEQRATLGMTADQAERYKIQMAGGSEAARAHALALFDQIQAWKAADAAITQASESARYFSAIQRDIDAYRAARNVDVAGVGLSDRQRELMEQEAAIRQKYAEDRVRLEEAQQVESTRLDDANYRARIDALRVAEQEKVGILLESAERKLEAEGSWTLGARQGLQEYVDSAANMAGAMADAMRGAFQGMEDALVQFVTKGKLNFKSLTESILGDLARIAIRQAIIGPIAGALSGVFTGGASASGGVGAATAADVSAAGDGLMFFSAGGYTGDVPKDQVSGVVHGQEYVLNAAATAKLGRSTLDALNAGATLPNGSSAPPQLVMGGVAPGAQFSMGDVHVSVVIQGDGAADVQTNGGPENFGHGLADAIRAFIQQEFVRMYRQGGVAWDSRNNRMAGAY
complement(3462560..3462817)       hypothetical protein; BBB39_16055                                                    N/A                 BordetellatrematumMTLAEFRSWQRFYQESPFDDLHRYHRPAAMLAQVMAGGDYPARLEWLVGDSAPMPDPVEGGLAGGQFSEADLRTFAALGLPIKQK
complement(3462889..3463224)       hypothetical protein; BBB39_16060                                                    N/A                 BordetellatrematumMEPNSLPEALFASDAVIVRQVVLGDGKKHKLYFKAISHVQFAKWLSEVSSADLGEREKANSRLIAGSLVTPSGAPAMTAEQADRIAPVVARRLGDIIAEINNFEAMKPGNV
complement(3463234..3463731)       PHAGE_Entero_mEp235_NC_019708: major tail subunit; BBB39_16065; phage(gi428781822)     3.16e-17            BordetellatrematumMTAGVIKTQGTHLFLLNTLATPDPVILKMACPTGITGLGAGAKSQIDVTCLDSIEDQEFIPGLGAPGQVSVPFNFIPTAESHQGVLTDLKESGLLLTWVVGFSDGTAVPTLDVSGGLTLPTGRTAAQFYAYIAEVTIDTATNDRVTGTLSIQRSGKVTWAFKPAE
complement(3463761..3464132)       PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; BBB39_16070; phage(gi374531660)     3.37e-17            BordetellatrematumMFAPILRTLSTPEVLAIVGSPARIYHFGNAPQGVLKPYITWFVVVSDPYSHLSGPPGADMDVIQIDCWAGPDDYQDTACLRLARAARDALELAGQSCRVIANRREPDTGLFHIGLQVDFIHNR
complement(3464132..3464638)       PHAGE_Entero_HK022_NC_002166: gp10; BBB39_16075; phage(gi9634129)                    1.64e-11            BordetellatrematumMKVEVKASGLDGVMDTLQKLPAEVASKRGGPVKLALARAARVIRDEARSNLRAVVGDSEETTGLLEKSVIASRGKAPLEGKGERYLVRVKRAAYDGKKLGKREGAGKRVTTHKTASLLEYGSSHQPATPWLRPAFVTAAPKALSVFETALKAGVDRAVKKLAEPSGGR
complement(3464799..3465173)       PHAGE_Pseudo_PMG1_NC_016765: putative head-tail adaptor; BBB39_16080; phage(gi374531655)     2.00e-34            BordetellatrematumMLAHRLRHRVTFEAKREPVRDEDGYTVPGSGGWETVVLADGLRLENVPAEVLTGPGREFQGGSATQAEASARVNLRWFPVSPTVLAYWRLRWDGQVFNIQSAETDATARREWRLRCVDGPSEGQ
complement(3465173..3465502)       PHAGE_Pseudo_PMG1_NC_016765: putative head-tail connector protein; BBB39_16085; phage(gi374531654)     3.74e-31            BordetellatrematumMSVISLETAKRFLDVIHNADDAKLQMLLDSAEDEAVQYMNRGLLEPIPAVIMVDGVLVDADPLTAPPDSMVLGVMLLLQASYQASPDDIAKLRAAAEVKLAPHRIGWGA
complement(3465505..3465729)       hypothetical protein; BBB39_16090                                                    N/A                 BordetellatrematumMEVKAISPFEHMGTRRRGDVFEVSERIGERLVQKGLAEFVSPPVKGAVSSGPADDSTGTGEPSGTSRRARVKKD
complement(3465778..3466956)       PHAGE_Pseudo_PMG1_NC_016765: major capsid protein; BBB39_16095; phage(gi374531651)     1.30e-123           BordetellatrematumMTPEQQIEQINASLKTVSDQLKSMAEKASARGTMDQELRADIDKTLTTQGELQARLATAEQLLAKVQNGGGEGARPKSMGEQFTEREDFSAFASNPRGKFRAPVSAEISTTTAGDLVVPQRVPGIVAPPNQQLRVRDLLSWGRTSSNAVEFVRETGFTNNAAPVAEGTLKPESTLTLEDASAPVATIAHWIRATKQILSDVPMLQSYIDGRLRYGLKLVEDRQLLKGSGVGLNIDGVYTQAIAYANPGVVVQAENRLDRLRLALLQAELAEYPADGIVLSPIDWTAIELLKDTTNGYLFANPRFVTQAGLWGRSIVTTTAMDAGDFLVGAFAMGAQGWDREDVNLTVSLEDRDNVVTNRVTLLVEERVALTVFRPEAFVKGGFDDLDAPAGG
complement(3466967..3467836)       PHAGE_Entero_mEp235_NC_019708: head maturation protease; BBB39_16100; phage(gi428781814)     2.47e-97            BordetellatrematumMSIKSLPAAPGGRPCAAVSSYLAPRALERWDAGVRAAIESKEDRSISVYDVIGYDWWTGEGVTAKRVASALRGMGAGPVTVNVNSPGGDMFEGLAIYNLLREHQGEVTIKVLGLAASAASIIAMAGDTVQIARAGFLMIHNCWVVAQGNRHDLREFAATMEPFDAAMADIYAARTGQEMDVVQRQMDGETWIGGSQAVEQGFADELLASDQVDKANTKTSASAVRRVEAVMRAAGLPRSEAQRLISDFKSSLSDSAGSGVRDATGRGMGHPAALSTTADLAASLTTILK
complement(3467846..3469144)       PHAGE_Pseudo_D3_NC_002484: portal protein; BBB39_16105; phage(gi9635589)             1.04e-118           BordetellatrematumMKHKAQKVGRLRAAVLGWLGAPFGLTDVDAWARLGATSSAGVNVNDQNILQLSAVWACARLISETIGTLPLGMHERTTNGKRPAPQHPLHFILGTQPNADTVSSVHWEAVVAAMLLRGNARCEKLMVGERVVGLQFLYPGRLAITRRADGAKECRYTEDDGRQRIIPASRIWTIPGWSLDGQTGVSVIRYGAQVFGAALATDEAAAGTFKRGLMPTTWFKYPKLLKDNQREEARTFITERASGAINSATPLILENEMEVGTIGINPKDAQMLESRAFSVEEICRWFRVPPWMVGHTEKSTSWGTGIEQQMIGFLVFTLRPWLKRIEQSIVKDLLTPAERSRYYPKFAVEGLLRSDSAARAAFYSVMVNNGILTRDEVRELEDRAPMGGNAAVLTVQTALAPLDSLGSNTADQQARAAMANWLKDMMAASADT
complement(3469141..3470865)       PHAGE_Burkho_phi6442_NC_009235: gp2, phage terminase, large subunit, putative; BBB39_16110; phage(gi134288625)     0.0                 BordetellatrematumMATGKYPRVAVATQFARDVVRGKAPCCRFIVLACQRHLDDLAKSKTRDFPYRFDPAKAEKKLRFIEFLPHTKGEWARLKQKVKLEPWQAFGIACTFGWVRKKDGLRRFRESYWEVPRKNGKSVIAAGVALGMFCADGEFGAEVYSGATTEKQAWEVFRPARLMVNRTPELKDLLGIEVNAGNLNRPEDGSRFEPIIGNPGDGSSPSCAVVDEYHEHDSDDLYVTMQTGMGARRQPLMFIITTAGANIAGPCYDKRQEVIEMLEGLVPNDELFGWIWTIDEGDDWTDPKVLAKANPNMGVSVYEDYLVAQQQQAIRRARFAGKFKTKHLNVWTAAKSGFINMAKFMSAPCLDPSLSLDQFKGWDCVLAHDLASKVDLTAQVKLFWKDIAGKRHYYCVAPAFWVPEDTVQGTENRRLADRYQAWVASEHLIQTDGAEIDYRDVLAEALEVNELAPVVACPIDPHGAANLSHQLDDEGLNPITIIQNYTNMADAMKEFEAAVLSGRFHHDGHPIMTWCVGNLIAKYMPGSDDVMRPIKQGNDNKIDGAVAVIMAIGRAMAGAEGPDLSDFFNNAVIG
complement(3470867..3471346)       PHAGE_Burkho_phi6442_NC_009235: gp1, phage terminase, small subunit, P27 family; BBB39_16115; phage(gi134288627)     2.56e-66            BordetellatrematumMAGVAGRSGRKPKPTERKIAAGNPGKRALNKDAPQFEGIVNIDPPEWLQGAGRDLWQHLAPLLCAQQVLQATDIQNLEFYCAAYGRFRAAEADISKYGITVPGAQGGMVKNPAATVINEATRQMATFGSLLGLDPSSRQRLLGPKKRTAGDELAAILSM
complement(3471846..3472094)       hypothetical protein; BBB39_16120                                                    N/A                 BordetellatrematumMRLSVSQGDPGYRAYRGLPCSVRPVVWLDGERVSQCVTADTRRGFVLVHVVNQDGKVQINAKRTDTKKERRYGRVEIVLVRT
3472265..3472537                   PHAGE_Burkho_phiE202_NC_009234: gp6, pANL56; BBB39_16125; phage(gi134288760)         1.07e-21            BordetellatrematumMDITYDPAKNDKNIAERGLSFELAHGFEWNSALVIEDARQDYSEVRYQALGKIDERLYMLVFTVRGEAIRVISLRKANSREVARYEKAQS
3472518..3472796                   PHAGE_Burkho_phiE202_NC_009234: gp7, pANL12; BBB39_16130; phage(gi134288781)         5.00e-15            BordetellatrematumMKKPNPEMIDKDNPEWGEAEFARAKPASEVLPAALQAKLGLRRRGPQKAPTKQAVTIRLSPEVLDAFKASGAGWQTRMDSALKEWLRTHQPS
complement(3473289..3473918)       hypothetical protein; BBB39_16135                                                    N/A                 BordetellatrematumMRHEPGTFSRAEHAVAAAYLMLAYPIEPKNATQLICEALRERFDAAFEPKSFSGLSPHEWHAQAVYIVKVLERTLGDSIGFHVLRGQYGTGAEAAASTRRVSEWLTPEAEQGSIEREVTDMLASHVLRGQPRLRRLSDTFDLPYSALQRPASAYRVLVGGVKRAALVRLDTRMRDAGLVTDFQSQELPTALDMVNQARQNNPRLVASLS
complement(3473920..3474327)       PHAGE_Salmon_BP63_NC_031250: hypothetical protein; BBB39_16140; phage(gi100001)      5.98e-07            BordetellatrematumMSRTKGAAYERKVAGMLTEATGIIWRRRVRNHDGDSDVVCDDAALAHISIECKHANTLCLPAWWRQAQEQAGTGVPVLIYRQTGARGESVMIDAHHANASHWPVAGRHTIIMGWDTAMQWLREKIPSKITGPGYI
complement(3474333..3474539)       hypothetical protein; BBB39_16145                                                    N/A                 BordetellatrematumMKKSQCDGRVKGMAKVERAVAVAGRQPLVSKGRYRMGACMAAAAARAQEAEPKIGSMRPSAKGKRGRA
complement(3474536..3475273)       PHAGE_Vibrio_X29_NC_024369: IstB-like ATP binding protein; BBB39_16150; phage(gi658311189)     3.97e-59            BordetellatrematumMAGFNFETEARHCPEHGEFMAMKTPVGWSDCTVCNAKRQQAERFRVEAEATRATLMRQADVPVRYHGKTLDTYHAASGGGQGIALGVAVDYADSFAEARASGRGLIFCGKPGTGKTHLAIGIIHRVLAAGYSARFAVVLDAMQAVKSTYRKDAAMTEAAVIEKLTAPDLLVLDEIGNQYGTDSERIILSSVINTRYNAMKPTILLSNLAKEQLVQELGERVMDRMREGGGRMVIFDWASHRGVKV
complement(3475260..3476192)       PHAGE_Entero_c_1_NC_019706: DNA replication protein O; BBB39_16155; phage(gi428781786)     4.29e-19            BordetellatrematumMSAVVLPMTPKSPQLENGFMRISNELEDAILAHPFTDRQHKVLRAVIRKTYGFGKKEDDLSASQLSAILAKTPRQHVSTALNELAAMKVIHKRAGRYGSIVGVNKNYAEWLPSVPAQAPASPESGQGGCPKPGQVSQIGTCPESGQGGCPELGQVASPGSGHTKDNLPKDIKHKEVTAGAVPSSADQFSLIGSEDGDAPPPAAQPMLLSDGSEHVPTSEEVAEWSAAYPQVNVLDAMRQMAVWLKANPAKRKTRRGINKFIVNWLGGAQRDAVSPRYRNPTTQPAGKGPRQHGNFDSQDYRSGVDDDGRF
complement(3476189..3476650)       PHAGE_Burkho_Bcep176_NC_007497: gp5; BBB39_16160; phage(gi77864630)                  4.89e-12            BordetellatrematumMRRTPMKPGKPLQRKTPMAPPRAAMRARRPGKRATKTVYRNRALLDLAQGQACTLLVPGWCLGHSKSARDTTVACHSNLAKHGKGAGIKAHDWAIAFGCYGCHFYIDQSGAPAEDKVRYFELGLAQTRQAVMAMGKWPEEAERGYQLLYGSAP
complement(3476647..3477204)       PHAGE_Burkho_BcepMigl_NC_019917: hypothetical protein; BBB39_16165; phage(gi431809873)     3.38e-11            BordetellatrematumMLTLDKRTPFPRRGGDQLARLSGMQCQAPQFHGWVSGQADYRGPVPVTVDSAAEYVRQVCGVSSRADLDHNREAARRFHALIRRPFLDYVQRREGLGQIFMGYRVTAQGIQAAYAHVSTFVQAISEAELGEVLLPYLIPVDPWEGVSRLDAAGAAARQVLFDLTRQGKVRSIGRGLVGERLWRSV
complement(3477198..3477713)       PHAGE_Burkho_KS9_NC_013055: hypothetical protein gp44; BBB39_16170; phage(gi255033727)     2.18e-16            BordetellatrematumMTSRLDAYHWLDVLYNDVRRTPGGVKDAARFLSERRGKSIHFESLRAKLSGQEGESLSFEMATLLTEWMLEKAGGAEYARDWLQTYASVEHGLVFVSVPPAPVGGHPDELAALLQKIMQAGVKVGKLNTAYLAAVADGRVDPAERSALHKSFWDLAVLCLRAVRNLTRVEC
3478025..3478222                   hypothetical protein; BBB39_16175                                                    N/A                 BordetellatrematumMTRNLDTQVVYLQFELTGEPDPTSQKWTDWIPMSEPLLSRAIASLQLQVQALTLARRGLLEDEKH
complement(3478328..3478591)       PHAGE_Salmon_SPN1S_NC_016761: hypothetical protein; BBB39_16180; phage(gi374531235)     1.47e-14            BordetellatrematumMTTPNINFKTFYLSLSAEERRAFALEAGTTTGYIEVHLVRAGRIPRRRKMESLWQACQRRRAGFTREQLIQFFFTSSAAPCLKREVS
3478686..3479378                   PHAGE_Mannhe_vB_MhS_587AP2_NC_028743: CI repressor; BBB39_16185; phage(gi970580063)     2.52e-16            BordetellatrematumMKSIKRIRQENFARAVDEHCKGSQTAAAEALGYSTPSLVSRYATGAKDIGDKTARKIEAAFDYPAYWMDADHLDIQPPSSQPSIDGTKLTVTIHRYDTGGRMGKAGVALRDQPGVIESWSVSREWLEKNVRSAGATNGLCIVTGFGDSMRPMFNPGDPLIVDSSVKSVDYDAVYFFRVDNEGFIKRLQRVPGKGLLAISENPAYRDWVIDPTMDFEVFGRVLKVWCSHDF
complement(3479400..3480275)       PHAGE_Strept_phiARI0923_NC_030946: hypothetical protein; BBB39_16190; phage(gi100034)     3.07e-42            BordetellatrematumMPSFVAIDVETANPNMASICQIGIATFRGGEKVDEWLSLVDPADYFDPVNTRIHGITESAVRGAPSFQSLMAEVRGRLDGAVVVSHTGFDRTALSRAFAISGGVVGDCVWLDSAQVARRAWPAVSRKGYGLANVAHMLGITFRHHNALADAATAGIILVRAIEESGKPLEWWLRRVKRRLPQADGSYIASVAQEGNEDGHLAGEVVVFTGQLSMSRQEAASRAAKAGCDVATGVTKKTTILVVGDQDIAKLGGKDKSAKHIKAETLIGQGAELRILGESDFLALLESAMDD
3480838..3481053                   PHAGE_Ralsto_RSM3_NC_011399: hypothetical protein; BBB39_16195; phage(gi209901315)     1.66e-13            BordetellatrematumMTMTTVHDLLMICPDDQITRMQIVWKAVAAGQWKEAAHHLRNAENEGESSWHDRCGMLADEFDSKVEVCAA
3481041..3481274                   hypothetical protein; BBB39_16200                                                    N/A                 BordetellatrematumMRRLIFIRHRVLRFTRSDLTGFQVLYRDRLLFGRIRVWRTEIDREDVPSWAFIAQACLGSTDWESRLFKEYAHLRPA
3481342..3481752                   PHAGE_Morgan_vB_MmoM_MP1_NC_031020: hypothetical protein; BBB39_16205; phage(gi100131)     7.67e-56            BordetellatrematumMKKLLIALPLTVAIAGCSTDADVAQRNLSKAADQFEINRRIVFYNGITDRYMLSIEGLCSVETSSSGHVLHVICKTGPSEFKKHMLGLSDNVTFFVEQLHPAKASVYHYRVVFKPQAIIPDIEFAGSTDALKVLAK
3482209..3482427                   hypothetical protein; BBB39_16210                                                    N/A                 BordetellatrematumMRKKSSVGRRAAALLRLAYRKQWDINAVCYGGSISALVFCALILTGVIGPSLDANDQTAEERTRKTAIAAKE
3482430..3482774                   PHAGE_Burkho_Bcep22_NC_005262: putative single strand DNA-binding protein; BBB39_16215; phage(gi38640325)     9.10e-52            BordetellatrematumVASVNKVILVGNLGRAPEVRYTPDGAAICNVSLATTSRWKDKASGEPREETEWHRVVMRGRLAEIAGEYLKKGGSIYIEGRIKTRKWQDKQSGADRYATEIIADQMQMLGGREGG
3482859..3483755                   PHAGE_Vibrio_VHML_NC_004456: ORF10; BBB39_16220; phage(gi27311176)                   3.27e-48            BordetellatrematumMWFKNLKVYRLSAAWSCLGETLEAALAKHAYQRGSNLEMQRLGWVSPRENGQLAHVVNGQILLSLRAEKKVLPSSAINQAAKARAKEIEEQQGYKPGRKQMKEIKERVTDELMPRALSVYRDTRAWIDTKNGWLVIDAAADGKADEVIGLLAKTVDPLPLEYLYVTQPPAAAMTGWLATDEAPDNFSIDQDTELRASGASKATVRYIKHSVDADDVCRHIQSGKQCTRLAMTWADRVSFVLTEGLDIKRVTPLDVVKEGSGPGLPDDERFDSDFALMTGELAKLLAELVHALGGETAA
3483799..3484134                   hypothetical protein; BBB39_16225                                                    N/A                 BordetellatrematumMTEILAKKAAEKAWQKHVTAMPPQERQHVTEADESAWVSLKTAVILQKAKPVQLSAPFSTPHFAQDFMTLAGRAGRTSRLRIMVRGELHDKSGALRISKRTKRPIIGWIPY
3484177..3484986                   PHAGE_Burkho_KS9_NC_013055: chromosome partitioning protein gp35; BBB39_16230; phage(gi255033718)     1.27e-120           BordetellatrematumMAKNSIDAYGASGKTNVLFFDPDALTLVADPVSPLYDERVHLPVDEQLARNIDYQGVLEPVAVSKNPETGAVEVVYGRQRVKSTRLANEWRKVRGEPPRMVPGIVYQGKRQNAPDAIASENEARTADTPMGRAEKMRRHMALGRGEDQLAVIYNCSVATVRNTLALLDCSAPVQKAVEAGQITVSHATALAKLAPDEQRSKVAELIDAGQGVKPHERSRKQAAIMGERPRLKSRKEITAALADAQGEYAAALRWVLGADQATEGSTHAE
